Genes within 1Mb (chr1:53248467:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116157 GPX7 646096 eQTL 8.38e-03 -0.0658 0.0249 0.0 0.0 0.428
ENSG00000116205 TCEANC2 -805117 eQTL 3.07e-02 0.0343 0.0159 0.0 0.0 0.428
ENSG00000121310 ECHDC2 321255 eQTL 1.44e-02 -0.0429 0.0175 0.0 0.0 0.428
ENSG00000134744 TUT4 694980 eQTL 1.63e-02 -0.0316 0.0131 0.0022 0.0 0.428
ENSG00000157184 CPT2 51675 eQTL 4.07e-05 -0.0821 0.0199 0.00169 0.0022 0.428
ENSG00000157193 LRP8 -79603 eQTL 2.93e-03 -0.0608 0.0204 0.00104 0.0 0.428
ENSG00000162384 CZIB 27833 eQTL 5.58e-13 -0.101 0.0138 0.0 0.0 0.428
ENSG00000162385 MAGOH 9949 eQTL 2.17e-04 -0.0444 0.012 0.0106 0.00842 0.428
ENSG00000280378 AL353898.3 -786413 eQTL 2.43e-02 0.0616 0.0273 0.0 0.0 0.428


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000081870 \N -697462 2.76e-07 1.5e-07 6.57e-08 2.15e-07 1.08e-07 8.37e-08 1.9e-07 5.82e-08 1.5e-07 7.6e-08 1.62e-07 1.15e-07 1.87e-07 8e-08 5.62e-08 7.89e-08 4.35e-08 1.64e-07 7.29e-08 5.75e-08 1.26e-07 1.42e-07 1.62e-07 3.49e-08 1.85e-07 1.31e-07 1.17e-07 1.12e-07 1.34e-07 1.05e-07 1.06e-07 5.08e-08 3.65e-08 9.78e-08 3.02e-08 3.18e-08 5.26e-08 7.25e-08 6.35e-08 5.45e-08 5.8e-08 1.59e-07 3.08e-08 7.23e-09 3.71e-08 1.01e-08 8.74e-08 0.0 4.61e-08
ENSG00000116157 GPX7 646096 2.91e-07 1.59e-07 6.57e-08 2.24e-07 1.02e-07 7.75e-08 2.16e-07 5.84e-08 1.66e-07 9.72e-08 1.69e-07 1.23e-07 2.24e-07 8.15e-08 6.2e-08 8.71e-08 5.42e-08 1.8e-07 7.53e-08 6.29e-08 1.33e-07 1.65e-07 1.68e-07 4.07e-08 2.09e-07 1.43e-07 1.23e-07 1.36e-07 1.37e-07 1.36e-07 1.21e-07 6.78e-08 4.16e-08 9.3e-08 3.97e-08 3.94e-08 5.54e-08 6.11e-08 5.78e-08 6.55e-08 5.77e-08 1.59e-07 3.46e-08 1.54e-08 5.4e-08 6.68e-09 7.97e-08 0.0 4.66e-08
ENSG00000116205 TCEANC2 -805117 2.74e-07 1.34e-07 5.82e-08 1.9e-07 9.82e-08 9.05e-08 1.6e-07 5.66e-08 1.45e-07 5.67e-08 1.52e-07 9.19e-08 1.52e-07 7.37e-08 5.72e-08 7.49e-08 4.24e-08 1.4e-07 6.92e-08 4.92e-08 1.25e-07 1.24e-07 1.44e-07 2.79e-08 1.55e-07 1.26e-07 1.1e-07 1.01e-07 1.23e-07 9.49e-08 1.02e-07 4.23e-08 3.51e-08 8.56e-08 5.99e-08 3.22e-08 4.41e-08 8.37e-08 6.67e-08 3.67e-08 5.45e-08 1.46e-07 4.7e-08 1.1e-08 3.29e-08 1.92e-08 1.21e-07 2e-09 4.91e-08
ENSG00000116212 \N -697618 2.76e-07 1.5e-07 6.57e-08 2.15e-07 1.08e-07 8.37e-08 1.9e-07 5.82e-08 1.5e-07 7.6e-08 1.62e-07 1.15e-07 1.87e-07 8e-08 5.62e-08 7.89e-08 4.35e-08 1.64e-07 7.29e-08 5.75e-08 1.26e-07 1.42e-07 1.62e-07 3.49e-08 1.85e-07 1.31e-07 1.17e-07 1.12e-07 1.34e-07 1.05e-07 1.06e-07 5.08e-08 3.65e-08 9.78e-08 3.02e-08 3.18e-08 5.26e-08 7.25e-08 6.35e-08 5.45e-08 5.8e-08 1.59e-07 3.08e-08 7.23e-09 3.71e-08 1.01e-08 8.74e-08 0.0 4.61e-08
ENSG00000134744 TUT4 694980 2.8e-07 1.5e-07 6.57e-08 2.15e-07 1.08e-07 8.37e-08 1.9e-07 5.82e-08 1.5e-07 8.53e-08 1.62e-07 1.15e-07 1.87e-07 8e-08 5.62e-08 7.89e-08 4.35e-08 1.64e-07 7.36e-08 5.75e-08 1.26e-07 1.42e-07 1.62e-07 3.49e-08 1.85e-07 1.31e-07 1.19e-07 1.12e-07 1.31e-07 1.05e-07 1.09e-07 4.75e-08 3.65e-08 9.78e-08 3.07e-08 3.18e-08 5.26e-08 7.68e-08 6.35e-08 5.45e-08 5.54e-08 1.59e-07 3.08e-08 7.23e-09 3.71e-08 1.01e-08 8.46e-08 0.0 4.47e-08
ENSG00000157184 CPT2 51675 8.53e-06 1.13e-05 1.63e-06 6.02e-06 2.42e-06 4.24e-06 1.15e-05 2.18e-06 9.81e-06 5.34e-06 1.3e-05 5.56e-06 1.64e-05 3.69e-06 3.01e-06 6.34e-06 4.74e-06 7.75e-06 2.93e-06 2.82e-06 5.26e-06 1.02e-05 8.67e-06 3.38e-06 1.58e-05 4.44e-06 5.26e-06 4.62e-06 1.16e-05 9.37e-06 6.36e-06 1.01e-06 1.17e-06 3.06e-06 4.62e-06 2.67e-06 1.73e-06 1.96e-06 2.11e-06 1e-06 1.04e-06 1.3e-05 1.4e-06 1.96e-07 8.09e-07 1.8e-06 1.39e-06 7.13e-07 4.9e-07
ENSG00000157193 LRP8 -79603 5.85e-06 9.1e-06 1.37e-06 3.94e-06 2.03e-06 2.67e-06 9.67e-06 1.55e-06 6.18e-06 4.42e-06 9.41e-06 3.93e-06 1.14e-05 3.34e-06 1.69e-06 5.06e-06 3.75e-06 4.11e-06 2.53e-06 2.44e-06 3.52e-06 7.46e-06 5.85e-06 2.04e-06 1.12e-05 2.78e-06 3.96e-06 2.96e-06 7.34e-06 7.71e-06 4.07e-06 5.5e-07 8.38e-07 2.63e-06 2.69e-06 1.85e-06 1.19e-06 1.56e-06 1.38e-06 8.21e-07 7.18e-07 8.77e-06 8.59e-07 1.47e-07 6.74e-07 1.01e-06 9.61e-07 6.35e-07 5.26e-07
ENSG00000162377 \N 550120 3.53e-07 2.5e-07 9.16e-08 2.48e-07 1.07e-07 1.26e-07 3.25e-07 7.98e-08 2.04e-07 1.39e-07 2.68e-07 1.72e-07 3.6e-07 8.55e-08 1.12e-07 1.13e-07 1.01e-07 2.75e-07 1.36e-07 8.39e-08 1.65e-07 2.24e-07 2.11e-07 5.6e-08 3.27e-07 1.94e-07 1.57e-07 1.67e-07 1.76e-07 2.19e-07 1.59e-07 5.62e-08 5.41e-08 1.03e-07 1.01e-07 5.7e-08 9.77e-08 7.51e-08 5.4e-08 7.53e-08 5.39e-08 2.6e-07 1.7e-08 1.85e-08 1.01e-07 8.76e-09 8.94e-08 3.35e-09 5.65e-08
ENSG00000162384 CZIB 27833 1.25e-05 1.57e-05 2.73e-06 9e-06 2.6e-06 6.44e-06 2.04e-05 2.68e-06 1.56e-05 7.65e-06 1.94e-05 7.34e-06 2.71e-05 5.67e-06 4.55e-06 8.95e-06 8.11e-06 1.21e-05 4.16e-06 4.21e-06 7.19e-06 1.42e-05 1.42e-05 4.68e-06 2.57e-05 5.08e-06 7.6e-06 6.83e-06 1.67e-05 1.52e-05 1.05e-05 9.94e-07 1.38e-06 4e-06 6.46e-06 3.63e-06 1.76e-06 2.49e-06 2.49e-06 1.97e-06 1.1e-06 1.88e-05 1.97e-06 2.73e-07 1.35e-06 2.35e-06 2.08e-06 8.83e-07 8.26e-07
ENSG00000162385 MAGOH 9949 2.37e-05 2.79e-05 5.25e-06 1.36e-05 4.53e-06 1.23e-05 3.71e-05 3.75e-06 2.5e-05 1.27e-05 3.19e-05 1.33e-05 4.26e-05 1.15e-05 6.11e-06 1.48e-05 1.4e-05 2.05e-05 7.51e-06 5.62e-06 1.18e-05 2.62e-05 2.57e-05 7.65e-06 3.79e-05 6.35e-06 1.11e-05 1.09e-05 2.85e-05 2.35e-05 1.66e-05 1.6e-06 2.38e-06 6.33e-06 9.92e-06 5.11e-06 2.77e-06 2.99e-06 4.1e-06 3.14e-06 1.67e-06 3.15e-05 2.76e-06 3.55e-07 2.04e-06 3.29e-06 3.62e-06 1.48e-06 1.52e-06
ENSG00000280378 AL353898.3 -786413 2.74e-07 1.34e-07 6.04e-08 1.89e-07 9.94e-08 8.45e-08 1.6e-07 5.75e-08 1.45e-07 6.08e-08 1.57e-07 9.19e-08 1.53e-07 7.64e-08 5.82e-08 7.49e-08 4.18e-08 1.4e-07 7.12e-08 4.95e-08 1.27e-07 1.26e-07 1.44e-07 2.87e-08 1.63e-07 1.26e-07 1.13e-07 1.04e-07 1.22e-07 9.88e-08 1.06e-07 4.77e-08 3.59e-08 8.89e-08 4.84e-08 3.07e-08 4.28e-08 8.2e-08 6.76e-08 3.75e-08 4.69e-08 1.46e-07 4.76e-08 1.43e-08 3.55e-08 1.77e-08 1.2e-07 2.02e-09 4.98e-08