JOB

MAGOH(ENSG00000162385)

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Statistical fine-mapping results from Japan COVID-19 Task Force

(Shown only for PIP>0.001)

qtl plot

Variant ID	rs ID	TSS Distance	Category	P-value	Effect Size	Effect Size (se)	PIP (SuSiE)	PIP (FINEMAP)	MAF
chr1:53239502:A:T	rs17785370	984	eQTL	4.11e-02	-0.0455	0.0222	0.0	0.0	0.0756
chr1:53235909:A:G	rs2297656	-2609	eQTL	4.40e-05	-0.0482	0.0117	0.0469	0.0386	0.457
chr1:53242281:A:G	rs17785382	3763	eQTL	1.12e-04	-0.0458	0.0118	0.0207	0.0156	0.471
chr1:53244328:A:T	\N	5810	eQTL	4.33e-02	0.418	0.206	0.0	0.0	0.00147
chr1:53231467:A:G	rs6673692	-7051	eQTL	2.81e-04	-0.0426	0.0117	0.00869	0.00663	0.468
chr1:53231112:T:G	rs6676003	-7406	eQTL	2.05e-04	-0.0443	0.0119	0.0112	0.00892	0.394
chr1:53246063:G:C	rs5177	7545	eQTL	1.32e-04	-0.0449	0.0117	0.0182	0.0133	0.492
chr1:53230379:C:T	rs10788949	-8139	eQTL	5.21e-05	-0.0473	0.0116	0.0393	0.0326	0.469
chr1:53247055:C:T	\N	8537	eQTL	2.49e-02	-0.0638	0.0284	0.0	0.0	0.0451
chr1:53229956:A:G	rs185925197	-8562	eQTL	2.74e-03	0.0456	0.0152	0.00156	0.00109	0.173
chr1:53228716:T:C	rs2275087	-9802	eQTL	5.94e-05	-0.0469	0.0116	0.0345	0.0285	0.47
chr1:53248467:C:T	rs12031155	9949	eQTL	2.17e-04	-0.0444	0.012	0.0106	0.00842	0.428
chr1:53228393:C:T	rs12116608	-10125	eQTL	5.95e-05	-0.0469	0.0116	0.0345	0.0284	0.47
chr1:53228258:T:C	rs12135400	-10260	eQTL	6.02e-05	-0.0469	0.0116	0.0343	0.0281	0.469
chr1:53228159:C:T	rs12145535	-10359	eQTL	5.86e-05	-0.047	0.0116	0.035	0.0288	0.47
chr1:53227955:T:G	rs12082305	-10563	eQTL	8.24e-03	0.04	0.0151	0.0	0.0	0.178
chr1:53227791:G:A	rs141946470	-10727	eQTL	1.48e-02	0.0709	0.029	0.0	0.0	0.0437
chr1:53249452:C:A	\N	10934	eQTL	4.44e-03	0.34	0.119	0.00165	0.00111	0.00245
chr1:53227418:G:T	rs6670999	-11100	eQTL	2.41e-04	-0.0439	0.0119	0.0106	0.00762	0.474
chr1:53227298:A:G	\N	-11220	eQTL	1.96e-02	-0.345	0.148	0.0	0.0	0.00147
chr1:53250123:T:C	rs75854125	11605	eQTL	2.99e-03	0.0454	0.0153	0.00151	0.00102	0.173
chr1:53226816:A:G	rs12136837	-11702	eQTL	6.42e-05	-0.0467	0.0116	0.0322	0.0264	0.47
chr1:53226765:T:A	rs12133464	-11753	eQTL	7.52e-05	-0.0469	0.0118	0.0275	0.0228	0.438
chr1:53225576:T:C	\N	-12942	eQTL	1.91e-02	0.194	0.0826	0.00101	0.0	0.00589
chr1:53251903:A:G	rs148191370	13385	eQTL	1.13e-02	0.0586	0.0231	0.0	0.0	0.0721
chr1:53251984:G:A	rs12408900	13466	eQTL	2.57e-04	-0.0437	0.0119	0.00916	0.00716	0.43
chr1:53254539:T:C	rs77324108	16021	eQTL	4.07e-03	0.044	0.0153	0.00128	0.0	0.174
chr1:53221917:T:C	rs6663121	-16601	eQTL	2.57e-02	-0.0319	0.0143	0.0	0.0	0.219
chr1:53220711:C:G	rs1679913	-17807	eQTL	2.91e-02	-0.0496	0.0227	0.0	0.0	0.0707
chr1:53257080:A:C	rs2297663	18562	eQTL	1.84e-04	-0.0441	0.0118	0.0135	0.00973	0.493
chr1:53219252:A:G	rs67974630	-19266	eQTL	1.29e-04	-0.0451	0.0117	0.0171	0.0136	0.476
chr1:53258293:C:G	rs2297661	19775	eQTL	2.96e-03	0.0455	0.0153	0.00152	0.00103	0.173
chr1:53218652:A:G	rs3736118	-19866	eQTL	7.08e-05	-0.0468	0.0117	0.0303	0.0241	0.485
chr1:53218249:C:G	rs12140585	-20269	eQTL	1.01e-04	-0.0459	0.0117	0.022	0.0171	0.485
chr1:53258792:T:A	\N	20274	eQTL	3.87e-02	0.328	0.158	0.0	0.0	0.00245
chr1:53216434:A:C	rs17369394	-22084	eQTL	6.60e-05	-0.0469	0.0117	0.0322	0.0257	0.487
chr1:53214418:G:A	rs1056425	-24100	eQTL	5.32e-04	-0.0414	0.0119	0.00525	0.00385	0.469
chr1:53214206:T:C	rs1056438	-24312	eQTL	9.36e-05	-0.046	0.0117	0.0234	0.0184	0.486
chr1:53212167:C:T	\N	-26351	eQTL	3.70e-03	-0.0969	0.0333	0.00152	0.001	0.0324
chr1:53210729:T:G	rs2229291	-27789	eQTL	5.87e-03	0.0422	0.0153	0.00105	0.0	0.176
chr1:53209860:T:C	rs12737375	-28658	eQTL	9.71e-05	-0.046	0.0117	0.0227	0.0177	0.486
chr1:53209377:G:A	rs370493	-29141	eQTL	2.39e-02	-0.0514	0.0227	0.0	0.0	0.0711
chr1:53268365:TG:T	rs79395289	29847	eQTL	1.18e-04	-0.0457	0.0118	0.0195	0.0147	0.469
chr1:53269842:G:C	rs7349164	31324	eQTL	1.15e-04	-0.0458	0.0118	0.0201	0.0152	0.467
chr1:53207016:T:C	rs1072706	-31502	eQTL	2.96e-04	-0.0431	0.0119	0.00851	0.00629	0.479
chr1:53270101:C:T	rs117841256	31583	eQTL	3.16e-02	-0.0622	0.0289	0.0	0.0	0.0456
chr1:53206598:G:A	rs7539949	-31920	eQTL	3.04e-03	-0.0356	0.012	0.0014	0.0	0.477
chr1:53270464:G:A	rs12028465	31946	eQTL	1.15e-04	-0.0459	0.0119	0.0199	0.0151	0.466
chr1:53270577:A:G	rs34468252	32059	eQTL	1.04e-04	-0.0462	0.0118	0.022	0.0166	0.47
chr1:53204153:C:G	\N	-34365	eQTL	4.19e-02	0.219	0.108	0.0	0.0	0.00294
chr1:53201537:A:G	rs78923886	-36981	eQTL	5.63e-03	0.0425	0.0153	0.00108	0.0	0.176
chr1:53276547:T:C	rs12027938	38029	eQTL	3.42e-03	0.0449	0.0153	0.0014	0.0	0.174
chr1:53200436:T:C	rs12754957	-38082	eQTL	3.47e-04	-0.0427	0.0119	0.0074	0.00548	0.479
chr1:53198310:G:A	\N	-40208	eQTL	2.84e-02	-0.146	0.0667	0.0	0.0	0.00785
chr1:53197456:G:T	rs3766760	-41062	eQTL	5.43e-04	-0.0418	0.012	0.00509	0.00379	0.467
chr1:53280031:C:T	rs11206134	41513	eQTL	8.40e-05	-0.0472	0.012	0.028	0.0205	0.451
chr1:53196659:C:A	rs577034240	-41859	eQTL	3.15e-04	0.17	0.047	0.00789	0.00785	0.0186
chr1:53280801:T:C	rs2297658	42283	eQTL	2.72e-03	0.0436	0.0145	0.00158	0.0011	0.208
chr1:53196196:G:A	\N	-42322	eQTL	3.30e-02	-0.324	0.152	0.0	0.0	0.00147
chr1:53280923:A:T	rs2297657	42405	eQTL	8.06e-05	-0.0468	0.0118	0.0289	0.0213	0.493
chr1:53281454:G:A	rs12402104	42936	eQTL	4.29e-05	-0.0494	0.012	0.0515	0.0394	0.467
chr1:53195101:A:G	rs11206124	-43417	eQTL	3.44e-04	-0.0431	0.012	0.00739	0.00553	0.477
chr1:53194690:C:T	rs12072546	-43828	eQTL	6.86e-03	0.0416	0.0153	0.0	0.0	0.175
chr1:53282614:G:A	rs1288516	44096	eQTL	1.58e-03	0.0406	0.0128	0.00224	0.00163	0.306
chr1:53192788:G:A	rs76880674	-45730	eQTL	4.81e-03	0.0434	0.0154	0.00116	0.0	0.176
chr1:53285077:C:T	rs141019466	46559	eQTL	1.85e-02	0.14	0.0592	0.0	0.0	0.0103
chr1:53191923:T:A	rs12410239	-46595	eQTL	4.03e-04	-0.0427	0.012	0.00657	0.00487	0.489
chr1:53191895:C:T	rs7549319	-46623	eQTL	4.00e-04	-0.0427	0.012	0.0066	0.00489	0.489
chr1:53191844:TCAGTCAGA:T	rs60100176	-46674	eQTL	3.73e-04	-0.043	0.012	0.007	0.00518	0.489
chr1:53191434:G:A	rs113755833	-47084	eQTL	4.30e-03	0.0455	0.0159	0.00125	0.0	0.164
chr1:53191414:G:A	rs7523531	-47104	eQTL	1.13e-03	-0.0395	0.0121	0.00274	0.00207	0.476
chr1:53285884:C:T	rs146725753	47366	eQTL	1.11e-04	0.183	0.0472	0.0198	0.0196	0.0177
chr1:53285938:C:T	rs4623641	47420	eQTL	1.82e-03	-0.0377	0.0121	0.00206	0.00144	0.381
chr1:53191004:A:G	rs35316080	-47514	eQTL	5.50e-03	-0.0339	0.0122	0.00101	0.0	0.472
chr1:53190621:C:T	rs35027235	-47897	eQTL	2.32e-02	-0.028	0.0123	0.0	0.0	0.468
chr1:53286462:A:G	rs12035926	47944	eQTL	3.03e-03	-0.036	0.0121	0.00146	0.0	0.377
chr1:53286564:G:A	\N	48046	eQTL	4.90e-02	-0.15	0.0762	0.0	0.0	0.00589
chr1:53287775:T:C	\N	49257	eQTL	3.09e-02	-0.143	0.066	0.0	0.0	0.00785
chr1:53186420:C:T	rs77862149	-52098	eQTL	4.22e-02	0.0287	0.0141	0.0	0.0	0.222
chr1:53186284:G:A	rs79189487	-52234	eQTL	4.21e-02	0.0287	0.0141	0.0	0.0	0.222
chr1:53185937:CTT:C	rs56973331	-52581	eQTL	2.36e-02	-0.0307	0.0135	0.0	0.0	0.268
chr1:53292831:G:A	\N	54313	eQTL	2.89e-02	-0.309	0.141	0.0	0.0	0.00196
chr1:53293030:A:C	\N	54512	eQTL	2.89e-02	-0.309	0.141	0.0	0.0	0.00196
chr1:53296137:A:T	rs1288498	57619	eQTL	4.65e-02	0.0726	0.0364	0.0	0.0	0.0275
chr1:53296517:G:A	rs1288497	57999	eQTL	4.65e-02	0.0726	0.0364	0.0	0.0	0.0275
chr1:53296830:TG:T	\N	58312	eQTL	2.16e-02	-0.209	0.091	0.001	0.0	0.00442
chr1:53177477:CA:C	\N	-61041	eQTL	3.40e-02	-0.323	0.152	0.0	0.0	0.00147
chr1:53174840:A:G	\N	-63678	eQTL	3.97e-02	0.26	0.126	0.0	0.0	0.00245
chr1:53306188:G:A	rs115038483	67670	eQTL	3.86e-02	-0.0542	0.0262	0.0	0.0	0.055
chr1:53170594:G:A	\N	-67924	eQTL	2.63e-02	-0.193	0.0868	0.0	0.0	0.00491
chr1:53306823:C:T	rs1288490	68305	eQTL	3.04e-02	-0.0571	0.0264	0.0	0.0	0.054
chr1:53167681:A:G	rs4500254	-70837	eQTL	2.65e-02	-0.0283	0.0127	0.0	0.0	0.348
chr1:53311135:C:A	\N	72617	eQTL	1.35e-02	-0.306	0.124	0.00114	0.0	0.00294
chr1:53313196:G:A	\N	74678	eQTL	2.60e-02	-0.146	0.0656	0.0	0.0	0.00834
chr1:53314356:G:A	rs17108319	75838	eQTL	2.28e-02	-0.0936	0.041	0.0	0.0	0.0216
chr1:53317048:C:T	rs59945990	78530	eQTL	3.70e-02	-0.0539	0.0258	0.0	0.0	0.055
chr1:53317140:G:A	rs72895386	78622	eQTL	3.63e-02	-0.0539	0.0257	0.0	0.0	0.055
chr1:53321556:C:G	\N	83038	eQTL	2.33e-02	-0.292	0.128	0.0	0.0	0.00294
chr1:53327258:C:T	\N	88740	eQTL	2.89e-02	-0.199	0.091	0.0	0.0	0.00442
chr1:53328915:G:A	\N	90397	eQTL	1.62e-02	-0.354	0.147	0.00103	0.0	0.00196
chr1:53146459:C:T	rs147593966	-92059	eQTL	8.55e-03	0.123	0.0468	0.00109	0.0	0.0182
chr1:53333406:A:G	\N	94888	eQTL	9.50e-03	-0.387	0.149	0.00117	0.0	0.00196
chr1:53337993:T:C	\N	99475	eQTL	2.16e-02	0.349	0.152	0.0	0.0	0.00147
chr1:53342185:A:G	rs117541110	103667	eQTL	3.16e-02	0.115	0.0535	0.0	0.0	0.0128
chr1:53344579:C:T	rs147837746	106061	eQTL	4.21e-02	-0.0837	0.0411	0.0	0.0	0.0206
chr1:53127869:G:A	rs148699994	-110649	eQTL	4.91e-03	0.129	0.0456	0.0016	0.00145	0.0157
chr1:53116688:C:T	\N	-121830	eQTL	1.15e-02	-0.405	0.16	0.0011	0.0	0.00147
chr1:53103821:A:G	rs78928127	-134697	eQTL	3.49e-02	-0.0868	0.0411	0.0	0.0	0.0211
chr1:53375097:T:C	rs139884772	136579	eQTL	3.71e-02	-0.0519	0.0249	0.0	0.0	0.0604
chr1:53378899:G:T	rs140116773	140381	eQTL	2.99e-02	-0.121	0.0555	0.0	0.0	0.0103
chr1:53380192:G:A	rs147828222	141674	eQTL	2.99e-02	-0.121	0.0555	0.0	0.0	0.0103
chr1:53382815:G:A	rs61768380	144297	eQTL	3.17e-02	-0.0378	0.0176	0.0	0.0	0.127
chr1:53382934:C:T	\N	144416	eQTL	3.73e-02	0.157	0.0753	0.0	0.0	0.00589
chr1:53385357:C:T	rs4926989	146839	eQTL	4.92e-02	-0.0232	0.0118	0.0	0.0	0.467
chr1:53091070:G:C	\N	-147448	eQTL	1.18e-02	-0.275	0.109	0.0011	0.0	0.00294
chr1:53089991:G:A	\N	-148527	eQTL	1.22e-02	-0.274	0.109	0.00108	0.0	0.00294
chr1:53389551:A:C	rs1766635	151033	eQTL	3.98e-02	0.0242	0.0118	0.0	0.0	0.468
chr1:53086954:C:T	\N	-151564	eQTL	1.94e-02	-0.354	0.151	0.0	0.0	0.00147
chr1:53394254:T:C	\N	155736	eQTL	1.13e-03	-0.278	0.085	0.00361	0.00532	0.0054
chr1:53396516:A:G	\N	157998	eQTL	1.98e-02	0.353	0.151	0.0	0.0	0.00147
chr1:53079840:A:T	\N	-158678	eQTL	2.94e-02	-0.15	0.0687	0.0	0.0	0.00785
chr1:53398341:C:T	\N	159823	eQTL	4.90e-02	0.135	0.0687	0.0	0.0	0.00736
chr1:53400631:G:A	\N	162113	eQTL	3.07e-02	-0.144	0.0665	0.0	0.0	0.00687
chr1:53402808:C:T	\N	164290	eQTL	2.80e-02	-0.126	0.0572	0.0	0.0	0.0118
chr1:53414378:TAG:T	\N	175860	eQTL	4.08e-03	-0.219	0.076	0.00162	0.00119	0.00638
chr1:53061621:C:G	rs185657881	-176897	eQTL	8.25e-03	0.107	0.0404	0.00123	0.0	0.0206
chr1:53055762:G:A	\N	-182756	eQTL	1.41e-02	-0.161	0.0654	0.001	0.0	0.00883
chr1:53045871:C:T	\N	-192647	eQTL	1.67e-03	0.255	0.0808	0.00247	0.00216	0.0054
chr1:53431334:C:T	\N	192816	eQTL	4.86e-02	-0.112	0.0568	0.0	0.0	0.0123
chr1:53431986:C:T	\N	193468	eQTL	4.86e-02	-0.112	0.0568	0.0	0.0	0.0123
chr1:53435586:GC:G	\N	197068	eQTL	2.51e-02	0.31	0.138	0.0	0.0	0.00245
chr1:53437473:A:C	\N	198955	eQTL	2.51e-02	0.31	0.138	0.0	0.0	0.00245
chr1:53438525:C:T	rs1019626297	200007	eQTL	3.21e-02	-0.12	0.0557	0.0	0.0	0.0113
chr1:53014471:G:A	\N	-224047	eQTL	4.25e-02	-0.0827	0.0407	0.0	0.0	0.0216
chr1:53471526:C:A	\N	233008	eQTL	7.84e-03	0.357	0.134	0.0013	0.0	0.00196
chr1:52998174:T:G	\N	-240344	eQTL	2.69e-02	0.293	0.132	0.0	0.0	0.00196
chr1:53484567:A:G	\N	246049	eQTL	4.58e-02	0.179	0.0897	0.0	0.0	0.00442
chr1:53484658:G:T	rs77187566	246140	eQTL	4.56e-02	-0.0926	0.0463	0.0	0.0	0.0191
chr1:53486858:C:T	rs139790610	248340	eQTL	4.72e-02	0.0744	0.0375	0.0	0.0	0.0226
chr1:52988986:G:A	\N	-249532	eQTL	4.19e-02	-0.142	0.0699	0.0	0.0	0.00687
chr1:53489576:C:T	rs12045244	251058	eQTL	4.12e-02	0.0254	0.0124	0.0	0.0	0.331
chr1:53492607:C:A	\N	254089	eQTL	4.51e-02	0.025	0.0124	0.0	0.0	0.33
chr1:53493873:T:A	rs554291230	255355	eQTL	4.76e-02	-0.112	0.0563	0.0	0.0	0.0118
chr1:52982480:G:A	rs7552650	-256038	eQTL	7.58e-03	0.0578	0.0216	0.00138	0.00102	0.0859
chr1:53503802:G:C	rs55921033	265284	eQTL	3.10e-02	0.0273	0.0126	0.0	0.0	0.329
chr1:53505020:C:T	\N	266502	eQTL	4.18e-02	0.0263	0.0129	0.0	0.0	0.308
chr1:53505239:G:A	rs12078193	266721	eQTL	4.25e-02	0.0257	0.0126	0.0	0.0	0.335
chr1:53506674:T:C	\N	268156	eQTL	3.48e-02	-0.16	0.0759	0.0	0.0	0.00638
chr1:52961347:T:A	\N	-277171	eQTL	3.79e-02	-0.136	0.0657	0.0	0.0	0.00883
chr1:53515942:A:G	rs496126	277424	eQTL	2.52e-02	0.0883	0.0394	0.0	0.0	0.0221
chr1:53521835:A:G	rs519786	283317	eQTL	4.44e-02	0.0776	0.0385	0.0	0.0	0.0231
chr1:53522044:A:T	rs490654	283526	eQTL	4.44e-02	0.0776	0.0385	0.0	0.0	0.0231
chr1:52952732:AC:A	\N	-285786	eQTL	2.77e-02	0.292	0.132	0.0	0.0	0.00196
chr1:53525042:T:C	rs492600	286524	eQTL	4.30e-02	0.0781	0.0386	0.0	0.0	0.0231
chr1:53531280:T:C	rs540345	292762	eQTL	4.23e-02	0.0789	0.0388	0.0	0.0	0.0226
chr1:52945450:C:T	\N	-293068	eQTL	2.15e-02	0.295	0.128	0.0	0.0	0.00196
chr1:53536075:T:C	\N	297557	eQTL	4.72e-02	0.237	0.119	0.0	0.0	0.00294
chr1:52936550:T:A	rs139855336	-301968	eQTL	3.83e-02	-0.0892	0.043	0.0	0.0	0.0186
chr1:53545608:C:T	\N	307090	eQTL	4.80e-02	0.238	0.12	0.0	0.0	0.00294
chr1:53550919:C:T	\N	312401	eQTL	4.61e-02	0.193	0.0964	0.0	0.0	0.00491
chr1:53551019:A:T	rs511202	312501	eQTL	4.76e-02	0.0821	0.0414	0.0	0.0	0.0211
chr1:53553259:G:A	rs501339	314741	eQTL	3.04e-02	-0.0514	0.0237	0.0	0.0	0.0658
chr1:53553800:A:G	rs489050	315282	eQTL	2.96e-02	-0.0518	0.0238	0.0	0.0	0.0658
chr1:53553995:A:G	rs490868	315477	eQTL	2.78e-02	-0.0439	0.0199	0.0	0.0	0.0942
chr1:52922900:C:G	\N	-315618	eQTL	2.40e-02	0.278	0.123	0.0	0.0	0.00245
chr1:53554412:A:G	rs495217	315894	eQTL	2.98e-02	-0.0517	0.0238	0.0	0.0	0.0658
chr1:53555697:C:A	rs117800081	317179	eQTL	2.34e-03	-0.0872	0.0286	0.00232	0.00261	0.0466
chr1:53557100:G:T	rs78279101	318582	eQTL	3.40e-02	-0.0766	0.0361	0.0	0.0	0.0309
chr1:53564220:G:A	rs12076641	325702	eQTL	3.43e-02	-0.0349	0.0164	0.0	0.0	0.135
chr1:53565029:C:A	rs7522812	326511	eQTL	3.43e-02	-0.0349	0.0164	0.0	0.0	0.135
chr1:53565676:A:AT	rs150024318	327158	eQTL	3.44e-02	-0.0348	0.0164	0.0	0.0	0.135
chr1:53566158:G:T	rs141625955	327640	eQTL	3.80e-03	-0.0826	0.0285	0.00184	0.0018	0.0476
chr1:53566762:A:G	\N	328244	eQTL	4.76e-02	-0.232	0.117	0.0	0.0	0.00294
chr1:52901118:A:G	\N	-337400	eQTL	3.67e-02	-0.323	0.154	0.0	0.0	0.00147
chr1:53590149:C:T	\N	351631	eQTL	2.29e-02	-0.224	0.0985	0.0	0.0	0.00393
chr1:52881343:C:T	\N	-357175	eQTL	3.56e-02	-0.279	0.133	0.0	0.0	0.00196
chr1:52879241:C:T	\N	-359277	eQTL	3.55e-02	0.215	0.102	0.0	0.0	0.00343
chr1:52876459:A:G	\N	-362059	eQTL	4.30e-02	-0.17	0.0839	0.0	0.0	0.00393
chr1:52875154:C:T	\N	-363364	eQTL	4.70e-02	-0.134	0.0672	0.0	0.0	0.00785
chr1:53603441:A:G	\N	364923	eQTL	1.60e-02	0.369	0.153	0.00106	0.0	0.00147
chr1:52873481:C:T	\N	-365037	eQTL	3.69e-02	-0.278	0.133	0.0	0.0	0.00196
chr1:53604014:A:G	\N	365496	eQTL	1.61e-02	0.368	0.153	0.00106	0.0	0.00147
chr1:52872045:A:G	rs151244021	-366473	eQTL	4.89e-02	0.104	0.0529	0.0	0.0	0.0132
chr1:53616781:G:A	\N	378263	eQTL	4.37e-02	0.144	0.0712	0.0	0.0	0.00687
chr1:52859227:G:A	rs139735790	-379291	eQTL	4.97e-02	0.104	0.053	0.0	0.0	0.0132
chr1:53628813:C:T	\N	390295	eQTL	2.60e-02	-0.229	0.103	0.0	0.0	0.00393
chr1:53635592:A:G	\N	397074	eQTL	2.93e-03	-0.404	0.135	0.00204	0.0017	0.00196
chr1:52817513:G:A	\N	-421005	eQTL	5.64e-03	0.318	0.115	0.00147	0.00111	0.00343
chr1:52807916:C:T	\N	-430602	eQTL	2.75e-02	-0.222	0.101	0.0	0.0	0.00245
chr1:52801366:CTA:C	\N	-437152	eQTL	4.84e-03	0.473	0.168	0.00172	0.00146	0.00147
chr1:53678495:C:A	\N	439977	eQTL	4.46e-02	0.266	0.132	0.0	0.0	0.00196
chr1:52795124:G:A	\N	-443394	eQTL	2.38e-02	0.205	0.0907	0.0	0.0	0.00442
chr1:53685938:G:A	rs72660647	447420	eQTL	4.86e-02	0.0307	0.0155	0.0	0.0	0.189
chr1:52788731:AAAAC:A	\N	-449787	eQTL	4.10e-02	-0.303	0.148	0.0	0.0	0.00147
chr1:52786970:A:C	\N	-451548	eQTL	2.75e-02	-0.222	0.101	0.0	0.0	0.00245
chr1:52764449:A:G	\N	-474069	eQTL	3.54e-02	0.216	0.102	0.0	0.0	0.00343
chr1:52763193:C:T	rs183826008	-475325	eQTL	3.31e-02	-0.144	0.0676	0.0	0.0	0.00736
chr1:53720390:G:A	\N	481872	eQTL	4.82e-02	-0.236	0.12	0.0	0.0	0.00294
chr1:52749127:C:T	\N	-489391	eQTL	6.89e-03	-0.288	0.106	0.00137	0.00114	0.00294
chr1:52744507:T:G	rs118104031	-494011	eQTL	2.42e-02	0.0409	0.0181	0.0	0.0	0.128
chr1:53744422:C:T	rs140331750	505904	eQTL	4.61e-02	0.0672	0.0337	0.0	0.0	0.0304
chr1:52730303:A:G	rs11578194	-508215	eQTL	2.09e-02	0.0693	0.03	0.0	0.0	0.0422
chr1:52729023:A:G	rs35005423	-509495	eQTL	2.09e-02	0.0691	0.0299	0.0	0.0	0.0422
chr1:52726505:C:T	\N	-512013	eQTL	4.90e-02	-0.0303	0.0154	0.0	0.0	0.164
chr1:52725336:C:T	rs11579377	-513182	eQTL	1.88e-02	0.0708	0.0301	0.0	0.0	0.0422
chr1:52724987:A:C	rs35358406	-513531	eQTL	2.33e-02	0.0683	0.0301	0.0	0.0	0.0417
chr1:52723524:C:A	\N	-514994	eQTL	2.65e-02	-0.223	0.1	0.0	0.0	0.00245
chr1:52723354:G:A	rs78422828	-515164	eQTL	4.69e-02	-0.0308	0.0155	0.0	0.0	0.162
chr1:52720850:C:T	rs12757985	-517668	eQTL	9.78e-03	0.0794	0.0307	0.00119	0.0	0.0407
chr1:52715855:G:A	rs77315551	-522663	eQTL	8.90e-03	0.0802	0.0306	0.00123	0.0	0.0402
chr1:52714970:A:T	\N	-523548	eQTL	2.45e-02	-0.34	0.151	0.0	0.0	0.00147
chr1:53774389:G:A	rs144984469	535871	eQTL	3.72e-02	-0.123	0.0591	0.0	0.0	0.0108
chr1:52702117:T:G	rs72668644	-536401	eQTL	2.66e-02	0.0391	0.0176	0.0	0.0	0.14
chr1:52694152:A:G	rs451821	-544366	eQTL	1.13e-02	-0.0322	0.0127	0.00107	0.0	0.293
chr1:53794761:G:A	rs139991340	556243	eQTL	4.32e-02	0.0853	0.0421	0.0	0.0	0.0236
chr1:52680638:G:A	\N	-557880	eQTL	2.70e-02	-0.146	0.0661	0.0	0.0	0.00883
chr1:52669432:G:A	rs148881686	-569086	eQTL	1.74e-02	0.0425	0.0179	0.0	0.0	0.149
chr1:53808093:G:A	rs145288483	569575	eQTL	2.22e-02	0.0964	0.0421	0.0	0.0	0.0245
chr1:53814920:C:A	\N	576402	eQTL	1.83e-02	0.564	0.238	0.00102	0.0	0.00147
chr1:52659299:G:T	rs72907557	-579219	eQTL	4.76e-02	-0.0311	0.0157	0.0	0.0	0.145
chr1:52658806:C:T	rs6685407	-579712	eQTL	4.80e-02	-0.031	0.0157	0.0	0.0	0.145
chr1:52653895:C:T	\N	-584623	eQTL	2.60e-02	-0.226	0.101	0.0	0.0	0.00245
chr1:52652782:G:A	rs111937782	-585736	eQTL	4.66e-02	-0.0313	0.0157	0.0	0.0	0.145
chr1:52651261:G:A	rs6700019	-587257	eQTL	4.96e-02	-0.0324	0.0165	0.0	0.0	0.134
chr1:52650806:G:A	rs144476722	-587712	eQTL	1.88e-02	-0.115	0.0486	0.0	0.0	0.0147
chr1:53840529:T:A	\N	602011	eQTL	3.97e-02	0.24	0.117	0.0	0.0	0.00245
chr1:53841776:G:A	rs74404414	603258	eQTL	4.78e-02	-0.0893	0.0451	0.0	0.0	0.0201
chr1:52634825:A:G	rs138580665	-603693	eQTL	7.04e-03	-0.118	0.0437	0.0012	0.0	0.0177
chr1:52633607:C:T	\N	-604911	eQTL	1.47e-02	0.25	0.102	0.00105	0.0	0.00442
chr1:53844755:T:C	\N	606237	eQTL	4.63e-02	0.281	0.141	0.0	0.0	0.00147
chr1:53856854:G:A	rs144810753	618336	eQTL	2.67e-03	0.112	0.0373	0.0022	0.00174	0.0304
chr1:53866539:G:A	rs78744034	628021	eQTL	4.17e-02	0.0696	0.0341	0.0	0.0	0.0309
chr1:53884587:G:T	rs35314517	646069	eQTL	4.75e-02	-0.0265	0.0133	0.0	0.0	0.357
chr1:53886882:T:G	\N	648364	eQTL	4.19e-02	-0.208	0.102	0.0	0.0	0.00343
chr1:53900477:G:A	\N	661959	eQTL	3.71e-02	-0.214	0.103	0.0	0.0	0.00343
chr1:52571629:G:A	\N	-666889	eQTL	2.85e-02	0.256	0.117	0.0	0.0	0.00245
chr1:53906430:G:A	\N	667912	eQTL	2.74e-02	0.182	0.0822	0.0	0.0	0.0054
chr1:52568406:T:C	\N	-670112	eQTL	2.31e-02	-0.182	0.08	0.0	0.0	0.00638
chr1:53911330:C:T	\N	672812	eQTL	4.35e-02	-0.217	0.107	0.0	0.0	0.00393
chr1:52559506:G:C	rs142420405	-679012	eQTL	3.66e-02	-0.104	0.0498	0.0	0.0	0.0132
chr1:53924512:T:C	\N	685994	eQTL	6.53e-03	0.386	0.141	0.00143	0.001	0.00196
chr1:53924793:C:T	rs12728734	686275	eQTL	4.22e-02	-0.0281	0.0138	0.0	0.0	0.257
chr1:53938091:G:C	\N	699573	eQTL	1.01e-02	0.344	0.133	0.00118	0.0	0.00196
chr1:52537596:A:T	rs148816241	-700922	eQTL	1.05e-02	-0.115	0.0449	0.00104	0.0	0.0162
chr1:52536561:AAG:A	\N	-701957	eQTL	2.11e-02	0.285	0.123	0.00104	0.0	0.00294
chr1:52535705:C:T	rs1014857903	-702813	eQTL	3.61e-02	-0.104	0.0498	0.0	0.0	0.0128
chr1:52528050:G:A	\N	-710468	eQTL	2.55e-02	-0.228	0.102	0.0	0.0	0.00245
chr1:53949628:C:T	\N	711110	eQTL	3.95e-03	0.38	0.132	0.00178	0.00155	0.00196
chr1:53950969:G:A	rs3806208	712451	eQTL	1.97e-02	0.098	0.042	0.0	0.0	0.0211
chr1:52524626:T:A	\N	-713892	eQTL	2.23e-03	-0.298	0.0972	0.00213	0.00166	0.00393
chr1:52521523:G:T	rs117295525	-716995	eQTL	3.40e-02	-0.106	0.0498	0.0	0.0	0.0128
chr1:53965627:C:A	rs190971031	727109	eQTL	1.18e-02	0.0937	0.0371	0.00111	0.0	0.0285
chr1:53968528:G:T	\N	730010	eQTL	7.76e-03	0.206	0.0773	0.00122	0.0	0.00589
chr1:53971787:TC:T	\N	733269	eQTL	3.88e-02	-0.322	0.156	0.0	0.0	0.00147
chr1:53974672:A:C	rs12144251	736154	eQTL	1.18e-02	-0.0357	0.0141	0.00106	0.0	0.252
chr1:52502039:T:C	\N	-736479	eQTL	1.92e-02	0.29	0.124	0.00107	0.0	0.00294
chr1:52501705:C:T	\N	-736813	eQTL	1.51e-02	0.378	0.155	0.00106	0.0	0.00147
chr1:52486562:A:G	\N	-751956	eQTL	1.49e-02	0.379	0.155	0.00107	0.0	0.00147
chr1:53991588:G:A	\N	753070	eQTL	3.28e-02	0.168	0.0786	0.0	0.0	0.00589
chr1:53992462:G:C	\N	753944	eQTL	1.16e-02	-0.147	0.058	0.00111	0.0	0.0123
chr1:53996095:G:A	\N	757577	eQTL	1.35e-02	0.229	0.0925	0.00103	0.0	0.00491
chr1:53997851:G:A	\N	759333	eQTL	1.35e-02	0.229	0.0925	0.00103	0.0	0.00491
chr1:53998064:C:A	rs10443230	759546	eQTL	1.99e-02	-0.0327	0.014	0.0	0.0	0.251
chr1:52465026:T:C	rs147611630	-773492	eQTL	2.91e-02	-0.0675	0.0309	0.0	0.0	0.0393
chr1:54018840:C:T	rs7528535	780322	eQTL	3.68e-02	-0.0308	0.0147	0.0	0.0	0.217
chr1:54020106:G:A	rs67676007	781588	eQTL	3.16e-02	0.0258	0.012	0.0	0.0	0.431
chr1:54021452:A:G	rs6696554	782934	eQTL	3.30e-02	0.0256	0.012	0.0	0.0	0.431
chr1:54021473:G:A	rs12033166	782955	eQTL	4.45e-02	0.0241	0.012	0.0	0.0	0.452
chr1:54021744:C:T	rs12047169	783226	eQTL	4.20e-02	0.025	0.0123	0.0	0.0	0.358
chr1:54021923:G:A	rs35719463	783405	eQTL	3.18e-02	0.0257	0.012	0.0	0.0	0.431
chr1:54022018:A:C	rs35299391	783500	eQTL	2.76e-02	0.0264	0.012	0.0	0.0	0.431
chr1:54022577:A:G	rs35109297	784059	eQTL	2.37e-02	0.0272	0.012	0.0	0.0	0.429
chr1:54022616:C:A	\N	784098	eQTL	2.49e-03	0.379	0.125	0.00231	0.00208	0.00245
chr1:54045826:G:A	\N	807308	eQTL	2.98e-02	-0.189	0.087	0.0	0.0	0.00491
chr1:54066448:C:T	\N	827930	eQTL	4.35e-02	0.307	0.152	0.0	0.0	0.00147
chr1:54069767:C:T	rs79569092	831249	eQTL	4.69e-02	0.0535	0.0269	0.0	0.0	0.055
chr1:54070337:A:T	rs6674224	831819	eQTL	2.36e-02	-0.0351	0.0155	0.0	0.0	0.189
chr1:52406019:C:T	rs138728154	-832499	eQTL	2.68e-02	-0.0686	0.0309	0.0	0.0	0.0388
chr1:54075741:C:T	rs117271478	837223	eQTL	2.68e-02	0.0579	0.0261	0.0	0.0	0.0564
chr1:52391639:C:T	\N	-846879	eQTL	4.74e-02	0.242	0.122	0.0	0.0	0.00245
chr1:52391600:T:C	rs58156353	-846918	eQTL	4.61e-02	0.0456	0.0228	0.0	0.0	0.0731
chr1:54088617:C:T	\N	850099	eQTL	4.28e-02	0.239	0.118	0.0	0.0	0.00245
chr1:54088618:G:A	rs76384967	850100	eQTL	1.23e-02	-0.0897	0.0358	0.0011	0.0	0.0285
chr1:54088967:A:G	\N	850449	eQTL	3.14e-02	0.122	0.0565	0.0	0.0	0.0108
chr1:52386789:A:G	rs12046071	-851729	eQTL	4.61e-02	0.0456	0.0228	0.0	0.0	0.0731
chr1:52386047:G:C	rs11205953	-852471	eQTL	3.93e-02	0.0433	0.021	0.0	0.0	0.0893
chr1:52385936:G:A	rs3087481	-852582	eQTL	4.32e-02	0.0467	0.0231	0.0	0.0	0.0707
chr1:52384774:T:C	rs3087484	-853744	eQTL	4.94e-02	0.0342	0.0174	0.0	0.0	0.133
chr1:52384306:A:G	rs6702536	-854212	eQTL	3.86e-02	0.0472	0.0228	0.0	0.0	0.0736
chr1:52382835:C:A	rs3790520	-855683	eQTL	4.61e-02	0.0456	0.0228	0.0	0.0	0.0731
chr1:52379926:C:T	rs12023264	-858592	eQTL	4.61e-02	0.0456	0.0228	0.0	0.0	0.0731
chr1:54097870:G:A	\N	859352	eQTL	1.96e-02	0.169	0.0724	0.0	0.0	0.00687
chr1:52378640:G:C	rs118011626	-859878	eQTL	4.61e-02	0.0456	0.0228	0.0	0.0	0.0731
chr1:52378075:G:A	rs12035530	-860443	eQTL	4.49e-02	0.0457	0.0228	0.0	0.0	0.0736
chr1:52377793:T:C	rs7537734	-860725	eQTL	4.14e-02	0.0465	0.0228	0.0	0.0	0.0736
chr1:52376949:G:A	\N	-861569	eQTL	2.57e-02	-0.227	0.102	0.0	0.0	0.00245
chr1:52376398:T:C	rs147773714	-862120	eQTL	4.48e-02	0.0459	0.0229	0.0	0.0	0.0726
chr1:52374629:C:T	rs12046402	-863889	eQTL	2.93e-02	0.0621	0.0285	0.0	0.0	0.0466
chr1:52373814:C:T	rs12045427	-864704	eQTL	4.48e-02	0.0459	0.0229	0.0	0.0	0.0726
chr1:52373505:G:C	\N	-865013	eQTL	4.64e-02	0.241	0.121	0.0	0.0	0.00245
chr1:52368395:A:G	rs79641518	-870123	eQTL	4.48e-02	0.0459	0.0229	0.0	0.0	0.0726
chr1:52367553:T:A	rs12039274	-870965	eQTL	4.48e-02	0.0459	0.0229	0.0	0.0	0.0726
chr1:54110837:C:T	\N	872319	eQTL	4.88e-02	0.134	0.0682	0.0	0.0	0.00638
chr1:54113343:G:A	\N	874825	eQTL	8.04e-03	0.206	0.0776	0.00121	0.0	0.00589
chr1:52362889:G:C	\N	-875629	eQTL	4.60e-02	0.241	0.12	0.0	0.0	0.00245
chr1:52362387:G:T	rs80290791	-876131	eQTL	4.47e-02	0.046	0.0229	0.0	0.0	0.0726
chr1:52362143:T:C	\N	-876375	eQTL	1.50e-02	0.379	0.155	0.00107	0.0	0.00147
chr1:54117639:T:C	\N	879121	eQTL	4.07e-02	-0.199	0.0971	0.0	0.0	0.00491
chr1:52355180:T:C	rs6690342	-883338	eQTL	4.45e-02	0.046	0.0229	0.0	0.0	0.0726
chr1:52353085:G:GT	\N	-885433	eQTL	3.03e-02	0.254	0.117	0.0	0.0	0.00245
chr1:52352516:G:A	rs7513934	-886002	eQTL	4.75e-02	0.0355	0.0179	0.0	0.0	0.118
chr1:54127292:C:T	\N	888774	eQTL	4.63e-02	-0.0242	0.0121	0.0	0.0	0.447
chr1:54128674:T:C	\N	890156	eQTL	4.94e-02	-0.0239	0.0121	0.0	0.0	0.448
chr1:54129507:C:A	rs143756114	890989	eQTL	2.94e-03	0.0892	0.0299	0.00208	0.00169	0.0422
chr1:52343150:C:A	rs4475695	-895368	eQTL	2.07e-02	-0.0537	0.0232	0.0	0.0	0.0711
chr1:52343123:C:T	rs143844002	-895395	eQTL	1.15e-02	0.0626	0.0247	0.00111	0.0	0.0648
chr1:52336661:ATT:A	rs66822425	-901857	eQTL	3.39e-02	-0.0489	0.023	0.0	0.0	0.0726
chr1:54144974:T:A	rs187952053	906456	eQTL	3.49e-02	0.0888	0.042	0.0	0.0	0.0201
chr1:54148971:A:AT	\N	910453	eQTL	4.58e-02	-0.125	0.0625	0.0	0.0	0.00981
chr1:54152374:G:A	rs184327227	913856	eQTL	3.66e-02	0.0867	0.0414	0.0	0.0	0.0211
chr1:52323329:C:A	\N	-915189	eQTL	3.06e-02	0.253	0.117	0.0	0.0	0.00245
chr1:54153731:C:T	rs7519887	915213	eQTL	4.30e-03	0.0739	0.0258	0.00176	0.00146	0.0569
chr1:52319488:G:A	rs2762825	-919030	eQTL	3.19e-02	-0.0387	0.018	0.0	0.0	0.118
chr1:52314663:G:C	rs2762828	-923855	eQTL	3.27e-02	-0.0492	0.023	0.0	0.0	0.0726
chr1:54170391:C:G	\N	931873	eQTL	1.80e-02	0.298	0.126	0.0	0.0	0.00245
chr1:52305736:C:G	rs2753402	-932782	eQTL	4.53e-02	0.046	0.0229	0.0	0.0	0.0726
chr1:54183916:G:A	rs12043944	945398	eQTL	2.77e-02	0.0564	0.0256	0.0	0.0	0.0584
chr1:54190309:T:G	\N	951791	eQTL	6.57e-03	0.442	0.162	0.00188	0.00121	0.00196
chr1:54191308:T:C	rs145405947	952790	eQTL	4.80e-02	0.0662	0.0334	0.0	0.0	0.0348
chr1:52284333:A:G	\N	-954185	eQTL	3.10e-02	0.252	0.117	0.0	0.0	0.00245
chr1:52278124:G:A	rs75356792	-960394	eQTL	1.47e-02	-0.0742	0.0304	0.0	0.0	0.0383
chr1:52271005:A:G	\N	-967513	eQTL	1.51e-02	0.321	0.132	0.0	0.0	0.00196
chr1:52270511:T:G	rs144563629	-968007	eQTL	3.82e-02	0.0457	0.022	0.0	0.0	0.0765
chr1:54213278:G:A	\N	974760	eQTL	2.73e-02	-0.192	0.0869	0.0	0.0	0.0054
chr1:52250733:A:G	rs145701163	-987785	eQTL	4.51e-02	0.0801	0.0399	0.0	0.0	0.0255
chr1:52244916:G:A	\N	-993602	eQTL	3.15e-02	0.252	0.117	0.0	0.0	0.00245

Expression Fold Change in Massively Parallel Reporter Assay (MPRA)

[Click here to download the full results]

mpra plot

Variant ID	rs ID	TSS Distance	P-Value	Expression Fold Change	Tier	Cell Type
chr1:52319488:G:A	rs2762825	-919030	0.0507	-0.3	None	K562
chr1:52319488:G:A	rs2762825	-919030	0.00045	-0.628	Tier 2	HepG2