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Genes within 1Mb (chr1:52849778:A:G):

View on , UCSC , GTEx , gnomAD

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000078618 NRDC 970841 eQTL 2.16e-02 -0.0198 0.0086 0.0 0.0 0.265
ENSG00000116171 SCP2 -77498 pQTL 2.03e-03 0.0711 0.023 0.00207 0.002 0.272
ENSG00000116171 SCP2 -77498 eQTL 3.68e-51 0.25 0.0156 0.0 0.00163 0.265
ENSG00000121310 ECHDC2 -77434 eQTL 4.74e-26 0.199 0.0183 0.0 0.0 0.265
ENSG00000157193 LRP8 -478292 eQTL 2.23e-02 0.0516 0.0225 0.0 0.0 0.265
ENSG00000162378 ZYG11B 123325 eQTL 1.50e-12 -0.152 0.0211 0.00101 0.00242 0.265
ENSG00000162383 SLC1A7 -292854 eQTL 1.10e-12 -0.213 0.0295 0.0 0.0 0.265
ENSG00000198841 KTI12 815962 eQTL 1.43e-02 0.0455 0.0186 0.0 0.0 0.265
ENSG00000226147 TUBBP10 -144948 eQTL 6.81e-15 0.332 0.042 0.0 0.0014 0.265

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina