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Genes within 1Mb (chr1:55030322:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 228999 sc-eQTL 6.89e-01 -0.0329 0.0822 0.391 B L1
ENSG00000116133 DHCR24 143127 sc-eQTL 8.10e-01 0.0187 0.0777 0.391 B L1
ENSG00000116205 TCEANC2 976738 sc-eQTL 3.17e-01 0.0671 0.0669 0.391 B L1
ENSG00000116209 TMEM59 976818 sc-eQTL 7.26e-01 0.0143 0.0409 0.391 B L1
ENSG00000116221 MRPL37 846281 sc-eQTL 8.59e-01 0.00949 0.0535 0.391 B L1
ENSG00000157216 SSBP3 616843 sc-eQTL 1.26e-01 -0.0856 0.0557 0.391 B L1
ENSG00000162402 USP24 -185042 sc-eQTL 9.83e-01 0.00101 0.0474 0.391 B L1
ENSG00000215883 CYB5RL 830286 sc-eQTL 4.60e-01 -0.0676 0.0912 0.391 B L1
ENSG00000243725 TTC4 314461 sc-eQTL 9.02e-01 0.00981 0.0795 0.391 B L1
ENSG00000006555 TTC22 228999 sc-eQTL 7.63e-01 0.0193 0.0641 0.391 CD4T L1
ENSG00000116205 TCEANC2 976738 sc-eQTL 7.10e-01 0.0195 0.0524 0.391 CD4T L1
ENSG00000116209 TMEM59 976818 sc-eQTL 6.71e-01 -0.0208 0.0488 0.391 CD4T L1
ENSG00000116221 MRPL37 846281 sc-eQTL 6.41e-01 0.0315 0.0674 0.391 CD4T L1
ENSG00000157216 SSBP3 616843 sc-eQTL 2.84e-01 0.06 0.0559 0.391 CD4T L1
ENSG00000162402 USP24 -185042 sc-eQTL 9.91e-01 -0.000512 0.0457 0.391 CD4T L1
ENSG00000243725 TTC4 314461 sc-eQTL 1.35e-01 -0.103 0.0684 0.391 CD4T L1
ENSG00000006555 TTC22 228999 sc-eQTL 6.28e-01 -0.0269 0.0554 0.391 CD8T L1
ENSG00000116205 TCEANC2 976738 sc-eQTL 4.52e-01 0.052 0.069 0.391 CD8T L1
ENSG00000116209 TMEM59 976818 sc-eQTL 3.74e-01 -0.0427 0.0479 0.391 CD8T L1
ENSG00000116221 MRPL37 846281 sc-eQTL 1.35e-01 0.0987 0.0657 0.391 CD8T L1
ENSG00000157216 SSBP3 616843 sc-eQTL 8.64e-01 0.00815 0.0474 0.391 CD8T L1
ENSG00000162402 USP24 -185042 sc-eQTL 3.85e-01 -0.0399 0.0458 0.391 CD8T L1
ENSG00000243725 TTC4 314461 sc-eQTL 4.29e-01 -0.063 0.0795 0.391 CD8T L1
ENSG00000116133 DHCR24 143127 sc-eQTL 6.27e-01 0.0359 0.0739 0.392 DC L1
ENSG00000116205 TCEANC2 976738 sc-eQTL 2.10e-02 -0.19 0.0817 0.392 DC L1
ENSG00000116209 TMEM59 976818 sc-eQTL 2.51e-01 0.0747 0.0649 0.392 DC L1
ENSG00000116221 MRPL37 846281 sc-eQTL 8.91e-01 -0.0121 0.0874 0.392 DC L1
ENSG00000157216 SSBP3 616843 sc-eQTL 6.62e-01 -0.0342 0.0779 0.392 DC L1
ENSG00000162390 ACOT11 488065 sc-eQTL 3.44e-02 0.158 0.0741 0.392 DC L1
ENSG00000162402 USP24 -185042 sc-eQTL 5.11e-02 0.0879 0.0448 0.392 DC L1
ENSG00000215883 CYB5RL 830286 sc-eQTL 6.93e-01 -0.0323 0.0817 0.392 DC L1
ENSG00000243725 TTC4 314461 sc-eQTL 1.05e-01 0.142 0.0874 0.392 DC L1
ENSG00000116133 DHCR24 143127 sc-eQTL 7.51e-01 0.017 0.0535 0.391 Mono L1
ENSG00000116205 TCEANC2 976738 sc-eQTL 3.72e-01 -0.0516 0.0577 0.391 Mono L1
ENSG00000116209 TMEM59 976818 sc-eQTL 8.79e-02 0.073 0.0426 0.391 Mono L1
ENSG00000116221 MRPL37 846281 sc-eQTL 5.29e-01 0.0453 0.0717 0.391 Mono L1
ENSG00000157216 SSBP3 616843 sc-eQTL 2.81e-01 0.0886 0.082 0.391 Mono L1
ENSG00000162402 USP24 -185042 sc-eQTL 3.74e-02 -0.102 0.0485 0.391 Mono L1
ENSG00000243725 TTC4 314461 sc-eQTL 4.92e-01 0.0593 0.0862 0.391 Mono L1
ENSG00000006555 TTC22 228999 sc-eQTL 9.91e-01 0.000832 0.0741 0.391 NK L1
ENSG00000116133 DHCR24 143127 sc-eQTL 6.11e-01 0.0381 0.0747 0.391 NK L1
ENSG00000116205 TCEANC2 976738 sc-eQTL 9.12e-01 0.00818 0.0738 0.391 NK L1
ENSG00000116209 TMEM59 976818 sc-eQTL 2.85e-01 -0.0618 0.0576 0.391 NK L1
ENSG00000116221 MRPL37 846281 sc-eQTL 1.82e-01 0.0959 0.0716 0.391 NK L1
ENSG00000157216 SSBP3 616843 sc-eQTL 2.88e-01 0.0662 0.0621 0.391 NK L1
ENSG00000162398 LEXM 224259 sc-eQTL 9.08e-01 0.00805 0.0699 0.391 NK L1
ENSG00000162402 USP24 -185042 sc-eQTL 5.46e-01 -0.0256 0.0424 0.391 NK L1
ENSG00000243725 TTC4 314461 sc-eQTL 5.26e-01 -0.0509 0.0801 0.391 NK L1
ENSG00000006555 TTC22 228999 sc-eQTL 6.96e-01 0.0256 0.0656 0.391 Other_T L1
ENSG00000116133 DHCR24 143127 sc-eQTL 1.54e-01 0.0725 0.0507 0.391 Other_T L1
ENSG00000116205 TCEANC2 976738 sc-eQTL 6.47e-01 0.0349 0.0761 0.391 Other_T L1
ENSG00000116209 TMEM59 976818 sc-eQTL 4.62e-01 -0.0385 0.0522 0.391 Other_T L1
ENSG00000116221 MRPL37 846281 sc-eQTL 4.13e-01 0.0401 0.0489 0.391 Other_T L1
ENSG00000157216 SSBP3 616843 sc-eQTL 7.15e-01 -0.0207 0.0566 0.391 Other_T L1
ENSG00000162402 USP24 -185042 sc-eQTL 6.13e-01 -0.0305 0.0603 0.391 Other_T L1
ENSG00000215883 CYB5RL 830286 sc-eQTL 7.40e-01 0.0274 0.0824 0.391 Other_T L1
ENSG00000243725 TTC4 314461 sc-eQTL 2.44e-01 -0.0956 0.0819 0.391 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 228999 sc-eQTL 7.25e-01 -0.024 0.0682 0.385 B_Activated L2
ENSG00000116133 DHCR24 143127 sc-eQTL 9.61e-01 0.00392 0.0802 0.385 B_Activated L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 2.40e-01 -0.101 0.0857 0.385 B_Activated L2
ENSG00000116209 TMEM59 976818 sc-eQTL 8.31e-01 0.0196 0.0914 0.385 B_Activated L2
ENSG00000116221 MRPL37 846281 sc-eQTL 4.80e-01 -0.0699 0.0986 0.385 B_Activated L2
ENSG00000157216 SSBP3 616843 sc-eQTL 7.30e-01 0.0309 0.0894 0.385 B_Activated L2
ENSG00000162402 USP24 -185042 sc-eQTL 2.47e-02 0.195 0.086 0.385 B_Activated L2
ENSG00000215883 CYB5RL 830286 sc-eQTL 9.64e-01 -0.00351 0.077 0.385 B_Activated L2
ENSG00000243725 TTC4 314461 sc-eQTL 4.72e-01 0.0601 0.0834 0.385 B_Activated L2
ENSG00000006555 TTC22 228999 sc-eQTL 6.21e-01 0.0435 0.0879 0.391 B_Intermediate L2
ENSG00000116133 DHCR24 143127 sc-eQTL 4.26e-01 0.0649 0.0815 0.391 B_Intermediate L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 3.73e-01 0.0724 0.0811 0.391 B_Intermediate L2
ENSG00000116209 TMEM59 976818 sc-eQTL 2.81e-01 0.075 0.0694 0.391 B_Intermediate L2
ENSG00000116221 MRPL37 846281 sc-eQTL 2.51e-01 0.0939 0.0816 0.391 B_Intermediate L2
ENSG00000157216 SSBP3 616843 sc-eQTL 3.04e-01 -0.0786 0.0763 0.391 B_Intermediate L2
ENSG00000162402 USP24 -185042 sc-eQTL 2.75e-01 -0.0702 0.0642 0.391 B_Intermediate L2
ENSG00000215883 CYB5RL 830286 sc-eQTL 9.45e-01 -0.00631 0.0912 0.391 B_Intermediate L2
ENSG00000243725 TTC4 314461 sc-eQTL 9.97e-01 -0.000288 0.0829 0.391 B_Intermediate L2
ENSG00000006555 TTC22 228999 sc-eQTL 2.27e-01 -0.1 0.0826 0.394 B_Memory L2
ENSG00000116133 DHCR24 143127 sc-eQTL 6.74e-01 -0.0346 0.0822 0.394 B_Memory L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 7.82e-01 -0.0244 0.0879 0.394 B_Memory L2
ENSG00000116209 TMEM59 976818 sc-eQTL 8.97e-01 -0.0095 0.0733 0.394 B_Memory L2
ENSG00000116221 MRPL37 846281 sc-eQTL 4.24e-01 0.0595 0.0742 0.394 B_Memory L2
ENSG00000157216 SSBP3 616843 sc-eQTL 2.17e-01 -0.0855 0.0691 0.394 B_Memory L2
ENSG00000162402 USP24 -185042 sc-eQTL 7.25e-01 -0.0239 0.0678 0.394 B_Memory L2
ENSG00000215883 CYB5RL 830286 sc-eQTL 9.54e-03 -0.216 0.0825 0.394 B_Memory L2
ENSG00000243725 TTC4 314461 sc-eQTL 9.04e-01 0.0105 0.0869 0.394 B_Memory L2
ENSG00000006555 TTC22 228999 sc-eQTL 9.38e-01 -0.00687 0.0876 0.391 B_Naive1 L2
ENSG00000116133 DHCR24 143127 sc-eQTL 7.09e-01 0.0307 0.0821 0.391 B_Naive1 L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 2.51e-01 0.084 0.073 0.391 B_Naive1 L2
ENSG00000116209 TMEM59 976818 sc-eQTL 5.21e-01 -0.0342 0.0532 0.391 B_Naive1 L2
ENSG00000116221 MRPL37 846281 sc-eQTL 9.48e-01 -0.00515 0.0785 0.391 B_Naive1 L2
ENSG00000157216 SSBP3 616843 sc-eQTL 5.37e-01 -0.0462 0.0747 0.391 B_Naive1 L2
ENSG00000162402 USP24 -185042 sc-eQTL 5.25e-01 -0.0375 0.0588 0.391 B_Naive1 L2
ENSG00000215883 CYB5RL 830286 sc-eQTL 7.26e-01 -0.0312 0.0888 0.391 B_Naive1 L2
ENSG00000243725 TTC4 314461 sc-eQTL 5.22e-01 0.0513 0.0801 0.391 B_Naive1 L2
ENSG00000006555 TTC22 228999 sc-eQTL 9.31e-01 -0.00761 0.088 0.393 B_Naive2 L2
ENSG00000116133 DHCR24 143127 sc-eQTL 3.30e-01 0.0747 0.0764 0.393 B_Naive2 L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 5.21e-01 0.0546 0.0849 0.393 B_Naive2 L2
ENSG00000116209 TMEM59 976818 sc-eQTL 2.25e-01 0.0849 0.0698 0.393 B_Naive2 L2
ENSG00000116221 MRPL37 846281 sc-eQTL 9.97e-01 0.00032 0.0824 0.393 B_Naive2 L2
ENSG00000157216 SSBP3 616843 sc-eQTL 9.14e-01 0.00882 0.0812 0.393 B_Naive2 L2
ENSG00000162402 USP24 -185042 sc-eQTL 7.91e-01 0.0171 0.0643 0.393 B_Naive2 L2
ENSG00000215883 CYB5RL 830286 sc-eQTL 6.19e-01 -0.045 0.0905 0.393 B_Naive2 L2
ENSG00000243725 TTC4 314461 sc-eQTL 6.74e-01 0.0397 0.0942 0.393 B_Naive2 L2
ENSG00000006555 TTC22 228999 sc-eQTL 9.09e-01 -0.00953 0.0831 0.398 CD4_CTL L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 2.79e-02 0.187 0.0845 0.398 CD4_CTL L2
ENSG00000116209 TMEM59 976818 sc-eQTL 8.21e-01 0.0176 0.0778 0.398 CD4_CTL L2
ENSG00000116221 MRPL37 846281 sc-eQTL 2.53e-03 0.286 0.0935 0.398 CD4_CTL L2
ENSG00000157216 SSBP3 616843 sc-eQTL 5.68e-01 -0.0336 0.0588 0.398 CD4_CTL L2
ENSG00000162402 USP24 -185042 sc-eQTL 9.57e-01 -0.00439 0.0808 0.398 CD4_CTL L2
ENSG00000243725 TTC4 314461 sc-eQTL 4.40e-01 0.0699 0.0903 0.398 CD4_CTL L2
ENSG00000006555 TTC22 228999 sc-eQTL 5.56e-01 0.0442 0.0749 0.391 CD4_Naive L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 8.59e-01 0.0102 0.057 0.391 CD4_Naive L2
ENSG00000116209 TMEM59 976818 sc-eQTL 3.45e-01 -0.0524 0.0553 0.391 CD4_Naive L2
ENSG00000116221 MRPL37 846281 sc-eQTL 7.35e-01 0.0242 0.0714 0.391 CD4_Naive L2
ENSG00000157216 SSBP3 616843 sc-eQTL 1.08e-01 0.0916 0.0567 0.391 CD4_Naive L2
ENSG00000162402 USP24 -185042 sc-eQTL 9.12e-01 -0.00543 0.0492 0.391 CD4_Naive L2
ENSG00000243725 TTC4 314461 sc-eQTL 1.60e-01 -0.105 0.0747 0.391 CD4_Naive L2
ENSG00000006555 TTC22 228999 sc-eQTL 6.40e-01 0.0371 0.0793 0.391 CD4_TCM L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 7.73e-01 -0.0223 0.0771 0.391 CD4_TCM L2
ENSG00000116209 TMEM59 976818 sc-eQTL 7.75e-01 0.0167 0.0582 0.391 CD4_TCM L2
ENSG00000116221 MRPL37 846281 sc-eQTL 6.07e-01 -0.0376 0.0732 0.391 CD4_TCM L2
ENSG00000157216 SSBP3 616843 sc-eQTL 1.78e-01 0.0965 0.0714 0.391 CD4_TCM L2
ENSG00000162402 USP24 -185042 sc-eQTL 8.16e-01 -0.0139 0.0595 0.391 CD4_TCM L2
ENSG00000243725 TTC4 314461 sc-eQTL 4.94e-01 -0.0586 0.0856 0.391 CD4_TCM L2
ENSG00000006555 TTC22 228999 sc-eQTL 3.30e-01 -0.0878 0.0899 0.391 CD4_TEM L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 2.26e-01 -0.103 0.085 0.391 CD4_TEM L2
ENSG00000116209 TMEM59 976818 sc-eQTL 5.26e-01 0.042 0.0661 0.391 CD4_TEM L2
ENSG00000116221 MRPL37 846281 sc-eQTL 7.44e-01 0.0278 0.0851 0.391 CD4_TEM L2
ENSG00000157216 SSBP3 616843 sc-eQTL 6.68e-01 0.0313 0.0729 0.391 CD4_TEM L2
ENSG00000162402 USP24 -185042 sc-eQTL 2.97e-01 -0.0692 0.0662 0.391 CD4_TEM L2
ENSG00000243725 TTC4 314461 sc-eQTL 3.72e-01 0.0784 0.0876 0.391 CD4_TEM L2
ENSG00000006555 TTC22 228999 sc-eQTL 6.16e-01 -0.0362 0.072 0.391 CD8_CTL L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 8.51e-01 0.0149 0.0797 0.391 CD8_CTL L2
ENSG00000116209 TMEM59 976818 sc-eQTL 9.48e-01 -0.00457 0.0694 0.391 CD8_CTL L2
ENSG00000116221 MRPL37 846281 sc-eQTL 2.38e-02 0.185 0.0812 0.391 CD8_CTL L2
ENSG00000157216 SSBP3 616843 sc-eQTL 3.59e-01 -0.0515 0.0561 0.391 CD8_CTL L2
ENSG00000162402 USP24 -185042 sc-eQTL 9.66e-01 -0.00239 0.0559 0.391 CD8_CTL L2
ENSG00000243725 TTC4 314461 sc-eQTL 6.34e-03 -0.226 0.0821 0.391 CD8_CTL L2
ENSG00000006555 TTC22 228999 sc-eQTL 6.73e-02 -0.148 0.0805 0.391 CD8_Naive L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 5.52e-01 0.0437 0.0734 0.391 CD8_Naive L2
ENSG00000116209 TMEM59 976818 sc-eQTL 8.65e-02 -0.123 0.0713 0.391 CD8_Naive L2
ENSG00000116221 MRPL37 846281 sc-eQTL 1.31e-01 0.13 0.0857 0.391 CD8_Naive L2
ENSG00000157216 SSBP3 616843 sc-eQTL 2.06e-01 0.0823 0.0649 0.391 CD8_Naive L2
ENSG00000162402 USP24 -185042 sc-eQTL 7.30e-01 0.0205 0.0593 0.391 CD8_Naive L2
ENSG00000243725 TTC4 314461 sc-eQTL 5.29e-01 0.0547 0.0867 0.391 CD8_Naive L2
ENSG00000006555 TTC22 228999 sc-eQTL 1.21e-01 0.136 0.087 0.405 CD8_TCM L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 6.11e-01 0.0449 0.0879 0.405 CD8_TCM L2
ENSG00000116209 TMEM59 976818 sc-eQTL 1.12e-01 0.123 0.077 0.405 CD8_TCM L2
ENSG00000116221 MRPL37 846281 sc-eQTL 9.13e-01 0.00961 0.0878 0.405 CD8_TCM L2
ENSG00000157216 SSBP3 616843 sc-eQTL 5.91e-01 -0.041 0.0762 0.405 CD8_TCM L2
ENSG00000162402 USP24 -185042 sc-eQTL 7.88e-01 -0.0199 0.0739 0.405 CD8_TCM L2
ENSG00000243725 TTC4 314461 sc-eQTL 5.34e-01 0.0559 0.0898 0.405 CD8_TCM L2
ENSG00000006555 TTC22 228999 sc-eQTL 9.57e-01 -0.00456 0.085 0.393 CD8_TEM L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 3.55e-01 -0.082 0.0885 0.393 CD8_TEM L2
ENSG00000116209 TMEM59 976818 sc-eQTL 2.41e-01 -0.101 0.0855 0.393 CD8_TEM L2
ENSG00000116221 MRPL37 846281 sc-eQTL 2.37e-01 0.103 0.0866 0.393 CD8_TEM L2
ENSG00000157216 SSBP3 616843 sc-eQTL 4.08e-01 -0.068 0.0821 0.393 CD8_TEM L2
ENSG00000162402 USP24 -185042 sc-eQTL 9.24e-01 -0.00832 0.0867 0.393 CD8_TEM L2
ENSG00000243725 TTC4 314461 sc-eQTL 7.90e-01 -0.0235 0.088 0.393 CD8_TEM L2
ENSG00000006555 TTC22 228999 sc-eQTL 4.06e-01 0.0647 0.0777 0.392 MAIT L2
ENSG00000116133 DHCR24 143127 sc-eQTL 8.12e-01 -0.0137 0.0576 0.392 MAIT L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 9.11e-01 0.00912 0.0811 0.392 MAIT L2
ENSG00000116209 TMEM59 976818 sc-eQTL 5.37e-01 0.0453 0.0732 0.392 MAIT L2
ENSG00000116221 MRPL37 846281 sc-eQTL 6.73e-01 0.0377 0.089 0.392 MAIT L2
ENSG00000157216 SSBP3 616843 sc-eQTL 3.91e-01 -0.0677 0.0787 0.392 MAIT L2
ENSG00000162402 USP24 -185042 sc-eQTL 5.36e-01 -0.0434 0.07 0.392 MAIT L2
ENSG00000215883 CYB5RL 830286 sc-eQTL 6.87e-01 0.0329 0.0814 0.392 MAIT L2
ENSG00000243725 TTC4 314461 sc-eQTL 9.36e-01 -0.00654 0.0809 0.392 MAIT L2
ENSG00000006555 TTC22 228999 sc-eQTL 7.88e-01 -0.0242 0.0897 0.387 NK_CD56bright L2
ENSG00000116133 DHCR24 143127 sc-eQTL 1.11e-01 0.126 0.0788 0.387 NK_CD56bright L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 8.62e-01 -0.0146 0.0838 0.387 NK_CD56bright L2
ENSG00000116209 TMEM59 976818 sc-eQTL 5.58e-01 -0.0479 0.0816 0.387 NK_CD56bright L2
ENSG00000116221 MRPL37 846281 sc-eQTL 1.22e-02 0.227 0.0899 0.387 NK_CD56bright L2
ENSG00000157216 SSBP3 616843 sc-eQTL 3.04e-01 -0.0707 0.0686 0.387 NK_CD56bright L2
ENSG00000162398 LEXM 224259 sc-eQTL 6.72e-01 0.0344 0.0812 0.387 NK_CD56bright L2
ENSG00000162402 USP24 -185042 sc-eQTL 1.99e-01 -0.0897 0.0696 0.387 NK_CD56bright L2
ENSG00000243725 TTC4 314461 sc-eQTL 8.79e-01 0.0135 0.0882 0.387 NK_CD56bright L2
ENSG00000006555 TTC22 228999 sc-eQTL 6.73e-01 -0.0316 0.0747 0.392 NK_CD56dim L2
ENSG00000116133 DHCR24 143127 sc-eQTL 5.11e-01 0.0512 0.0778 0.392 NK_CD56dim L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 5.74e-01 0.0475 0.0843 0.392 NK_CD56dim L2
ENSG00000116209 TMEM59 976818 sc-eQTL 7.20e-01 0.0225 0.0626 0.392 NK_CD56dim L2
ENSG00000116221 MRPL37 846281 sc-eQTL 3.26e-01 0.08 0.0812 0.392 NK_CD56dim L2
ENSG00000157216 SSBP3 616843 sc-eQTL 1.85e-01 0.0882 0.0664 0.392 NK_CD56dim L2
ENSG00000162398 LEXM 224259 sc-eQTL 5.89e-01 -0.0414 0.0766 0.392 NK_CD56dim L2
ENSG00000162402 USP24 -185042 sc-eQTL 9.02e-01 -0.00603 0.0487 0.392 NK_CD56dim L2
ENSG00000243725 TTC4 314461 sc-eQTL 4.46e-02 -0.167 0.0826 0.392 NK_CD56dim L2
ENSG00000006555 TTC22 228999 sc-eQTL 5.66e-01 0.0527 0.0917 0.386 NK_HLA L2
ENSG00000116133 DHCR24 143127 sc-eQTL 6.48e-01 0.0409 0.0895 0.386 NK_HLA L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 3.13e-01 0.0871 0.0861 0.386 NK_HLA L2
ENSG00000116209 TMEM59 976818 sc-eQTL 5.69e-01 0.0489 0.0857 0.386 NK_HLA L2
ENSG00000116221 MRPL37 846281 sc-eQTL 1.41e-01 0.139 0.094 0.386 NK_HLA L2
ENSG00000157216 SSBP3 616843 sc-eQTL 8.90e-01 0.0107 0.0771 0.386 NK_HLA L2
ENSG00000162398 LEXM 224259 sc-eQTL 4.48e-01 0.0659 0.0868 0.386 NK_HLA L2
ENSG00000162402 USP24 -185042 sc-eQTL 2.93e-01 0.0671 0.0636 0.386 NK_HLA L2
ENSG00000243725 TTC4 314461 sc-eQTL 8.32e-01 0.0203 0.0953 0.386 NK_HLA L2
ENSG00000006555 TTC22 228999 sc-eQTL 3.92e-01 0.0676 0.0789 0.392 NK_cytokine L2
ENSG00000116133 DHCR24 143127 sc-eQTL 7.73e-01 -0.0231 0.08 0.392 NK_cytokine L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 4.03e-01 -0.0664 0.0793 0.392 NK_cytokine L2
ENSG00000116209 TMEM59 976818 sc-eQTL 1.91e-01 -0.0843 0.0643 0.392 NK_cytokine L2
ENSG00000116221 MRPL37 846281 sc-eQTL 7.32e-01 0.0273 0.0795 0.392 NK_cytokine L2
ENSG00000157216 SSBP3 616843 sc-eQTL 3.21e-02 0.142 0.066 0.392 NK_cytokine L2
ENSG00000162398 LEXM 224259 sc-eQTL 9.15e-01 0.00892 0.0834 0.392 NK_cytokine L2
ENSG00000162402 USP24 -185042 sc-eQTL 2.96e-01 -0.0594 0.0567 0.392 NK_cytokine L2
ENSG00000243725 TTC4 314461 sc-eQTL 9.90e-01 0.00109 0.0843 0.392 NK_cytokine L2
ENSG00000006555 TTC22 228999 sc-eQTL 9.84e-01 -0.00192 0.0976 0.381 PB L2
ENSG00000116133 DHCR24 143127 sc-eQTL 4.59e-01 -0.0641 0.0863 0.381 PB L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 4.89e-01 -0.0729 0.105 0.381 PB L2
ENSG00000116209 TMEM59 976818 sc-eQTL 5.41e-01 0.027 0.0439 0.381 PB L2
ENSG00000116221 MRPL37 846281 sc-eQTL 9.70e-02 -0.132 0.079 0.381 PB L2
ENSG00000157216 SSBP3 616843 sc-eQTL 6.50e-01 -0.0419 0.0923 0.381 PB L2
ENSG00000162402 USP24 -185042 sc-eQTL 7.54e-01 0.0329 0.105 0.381 PB L2
ENSG00000215883 CYB5RL 830286 sc-eQTL 3.04e-01 -0.112 0.108 0.381 PB L2
ENSG00000243725 TTC4 314461 sc-eQTL 4.88e-01 0.0705 0.101 0.381 PB L2
ENSG00000006555 TTC22 228999 sc-eQTL 2.07e-01 -0.102 0.0806 0.393 Pro_T L2
ENSG00000116133 DHCR24 143127 sc-eQTL 1.58e-02 0.165 0.0678 0.393 Pro_T L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 4.56e-01 0.0627 0.0839 0.393 Pro_T L2
ENSG00000116209 TMEM59 976818 sc-eQTL 4.49e-01 -0.0441 0.0582 0.393 Pro_T L2
ENSG00000116221 MRPL37 846281 sc-eQTL 8.94e-01 0.00763 0.0571 0.393 Pro_T L2
ENSG00000157216 SSBP3 616843 sc-eQTL 4.28e-01 -0.0508 0.0639 0.393 Pro_T L2
ENSG00000162402 USP24 -185042 sc-eQTL 9.73e-01 0.00269 0.0781 0.393 Pro_T L2
ENSG00000215883 CYB5RL 830286 sc-eQTL 5.71e-01 0.0437 0.077 0.393 Pro_T L2
ENSG00000243725 TTC4 314461 sc-eQTL 6.18e-01 -0.0428 0.0857 0.393 Pro_T L2
ENSG00000006555 TTC22 228999 sc-eQTL 3.63e-01 0.0729 0.0799 0.391 Treg L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 2.93e-01 0.0901 0.0856 0.391 Treg L2
ENSG00000116209 TMEM59 976818 sc-eQTL 1.00e+00 3.24e-05 0.0678 0.391 Treg L2
ENSG00000116221 MRPL37 846281 sc-eQTL 8.49e-01 -0.016 0.0839 0.391 Treg L2
ENSG00000157216 SSBP3 616843 sc-eQTL 5.44e-01 -0.0455 0.0748 0.391 Treg L2
ENSG00000162402 USP24 -185042 sc-eQTL 9.74e-01 0.00229 0.0713 0.391 Treg L2
ENSG00000243725 TTC4 314461 sc-eQTL 6.46e-01 -0.0413 0.0898 0.391 Treg L2
ENSG00000116133 DHCR24 143127 sc-eQTL 4.98e-01 0.0488 0.0718 0.395 cDC L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 1.36e-02 -0.208 0.0833 0.395 cDC L2
ENSG00000116209 TMEM59 976818 sc-eQTL 6.65e-01 -0.0312 0.072 0.395 cDC L2
ENSG00000116221 MRPL37 846281 sc-eQTL 2.23e-01 -0.112 0.0918 0.395 cDC L2
ENSG00000157216 SSBP3 616843 sc-eQTL 4.52e-01 -0.0639 0.0848 0.395 cDC L2
ENSG00000162390 ACOT11 488065 sc-eQTL 2.16e-02 0.18 0.0778 0.395 cDC L2
ENSG00000162402 USP24 -185042 sc-eQTL 9.72e-01 -0.00316 0.0886 0.395 cDC L2
ENSG00000215883 CYB5RL 830286 sc-eQTL 2.35e-01 -0.0903 0.0758 0.395 cDC L2
ENSG00000243725 TTC4 314461 sc-eQTL 8.35e-02 0.157 0.0901 0.395 cDC L2
ENSG00000116133 DHCR24 143127 sc-eQTL 1.71e-01 -0.0717 0.0522 0.391 cMono_IL1B L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 4.56e-01 -0.0543 0.0727 0.391 cMono_IL1B L2
ENSG00000116209 TMEM59 976818 sc-eQTL 1.62e-01 0.0616 0.0439 0.391 cMono_IL1B L2
ENSG00000116221 MRPL37 846281 sc-eQTL 9.31e-01 0.00684 0.0786 0.391 cMono_IL1B L2
ENSG00000157216 SSBP3 616843 sc-eQTL 6.99e-01 0.031 0.0802 0.391 cMono_IL1B L2
ENSG00000162402 USP24 -185042 sc-eQTL 4.21e-02 -0.12 0.0587 0.391 cMono_IL1B L2
ENSG00000243725 TTC4 314461 sc-eQTL 1.11e-01 0.144 0.0901 0.391 cMono_IL1B L2
ENSG00000116133 DHCR24 143127 sc-eQTL 1.96e-01 0.0634 0.0488 0.391 cMono_S100A L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 1.71e-01 -0.102 0.0744 0.391 cMono_S100A L2
ENSG00000116209 TMEM59 976818 sc-eQTL 4.05e-01 0.0498 0.0598 0.391 cMono_S100A L2
ENSG00000116221 MRPL37 846281 sc-eQTL 9.83e-01 -0.00182 0.0865 0.391 cMono_S100A L2
ENSG00000157216 SSBP3 616843 sc-eQTL 6.03e-01 0.0467 0.0897 0.391 cMono_S100A L2
ENSG00000162402 USP24 -185042 sc-eQTL 7.56e-01 -0.0226 0.0727 0.391 cMono_S100A L2
ENSG00000243725 TTC4 314461 sc-eQTL 8.69e-01 -0.0151 0.091 0.391 cMono_S100A L2
ENSG00000006555 TTC22 228999 sc-eQTL 3.55e-01 0.0763 0.0823 0.388 gdT L2
ENSG00000116133 DHCR24 143127 sc-eQTL 8.30e-01 0.0198 0.092 0.388 gdT L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 3.22e-01 0.0914 0.0921 0.388 gdT L2
ENSG00000116209 TMEM59 976818 sc-eQTL 7.69e-01 -0.0275 0.0937 0.388 gdT L2
ENSG00000116221 MRPL37 846281 sc-eQTL 8.26e-02 0.186 0.106 0.388 gdT L2
ENSG00000157216 SSBP3 616843 sc-eQTL 4.46e-01 0.0502 0.0656 0.388 gdT L2
ENSG00000162402 USP24 -185042 sc-eQTL 6.50e-01 -0.0401 0.0883 0.388 gdT L2
ENSG00000215883 CYB5RL 830286 sc-eQTL 3.11e-01 -0.0931 0.0915 0.388 gdT L2
ENSG00000243725 TTC4 314461 sc-eQTL 6.94e-01 -0.0408 0.103 0.388 gdT L2
ENSG00000116133 DHCR24 143127 sc-eQTL 9.70e-01 -0.00253 0.0668 0.393 intMono L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 1.74e-02 0.197 0.082 0.393 intMono L2
ENSG00000116209 TMEM59 976818 sc-eQTL 5.28e-01 0.0386 0.061 0.393 intMono L2
ENSG00000116221 MRPL37 846281 sc-eQTL 3.40e-01 0.0891 0.0932 0.393 intMono L2
ENSG00000157216 SSBP3 616843 sc-eQTL 2.76e-01 0.104 0.0951 0.393 intMono L2
ENSG00000162402 USP24 -185042 sc-eQTL 8.36e-01 0.0177 0.0851 0.393 intMono L2
ENSG00000243725 TTC4 314461 sc-eQTL 7.01e-01 -0.0349 0.0905 0.393 intMono L2
ENSG00000116133 DHCR24 143127 sc-eQTL 9.54e-01 -0.0038 0.0651 0.382 ncMono L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 6.24e-01 -0.0399 0.0813 0.382 ncMono L2
ENSG00000116209 TMEM59 976818 sc-eQTL 8.10e-01 -0.0157 0.0651 0.382 ncMono L2
ENSG00000116221 MRPL37 846281 sc-eQTL 2.31e-01 0.101 0.0837 0.382 ncMono L2
ENSG00000157216 SSBP3 616843 sc-eQTL 8.88e-01 0.013 0.0918 0.382 ncMono L2
ENSG00000162402 USP24 -185042 sc-eQTL 8.06e-01 0.018 0.0734 0.382 ncMono L2
ENSG00000243725 TTC4 314461 sc-eQTL 9.85e-01 -0.00166 0.0869 0.382 ncMono L2
ENSG00000116133 DHCR24 143127 sc-eQTL 5.83e-01 0.0425 0.0773 0.398 pDC L2
ENSG00000116205 TCEANC2 976738 sc-eQTL 4.46e-02 -0.185 0.0916 0.398 pDC L2
ENSG00000116209 TMEM59 976818 sc-eQTL 9.08e-02 0.125 0.0734 0.398 pDC L2
ENSG00000116221 MRPL37 846281 sc-eQTL 3.52e-02 0.206 0.097 0.398 pDC L2
ENSG00000157216 SSBP3 616843 sc-eQTL 2.28e-01 -0.105 0.087 0.398 pDC L2
ENSG00000162390 ACOT11 488065 sc-eQTL 6.60e-01 0.0162 0.0367 0.398 pDC L2
ENSG00000162402 USP24 -185042 sc-eQTL 3.41e-01 0.0591 0.0619 0.398 pDC L2
ENSG00000215883 CYB5RL 830286 sc-eQTL 6.41e-01 0.0396 0.0848 0.398 pDC L2
ENSG00000243725 TTC4 314461 sc-eQTL 8.80e-01 -0.0148 0.098 0.398 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 228999 sc-eQTL 6.91e-01 -0.0334 0.0839 0.391 B_Memory LOneK1K
ENSG00000116133 DHCR24 143127 sc-eQTL 8.87e-01 0.0119 0.0843 0.391 B_Memory LOneK1K
ENSG00000116205 TCEANC2 976738 sc-eQTL 9.65e-01 0.00356 0.0814 0.391 B_Memory LOneK1K
ENSG00000116209 TMEM59 976818 sc-eQTL 7.16e-01 0.0231 0.0633 0.391 B_Memory LOneK1K
ENSG00000116221 MRPL37 846281 sc-eQTL 3.22e-01 0.0752 0.0757 0.391 B_Memory LOneK1K
ENSG00000157216 SSBP3 616843 sc-eQTL 1.82e-01 -0.0879 0.0657 0.391 B_Memory LOneK1K
ENSG00000162402 USP24 -185042 sc-eQTL 9.96e-01 -0.000319 0.0602 0.391 B_Memory LOneK1K
ENSG00000215883 CYB5RL 830286 sc-eQTL 7.74e-02 -0.163 0.0918 0.391 B_Memory LOneK1K
ENSG00000243725 TTC4 314461 sc-eQTL 7.31e-01 0.0285 0.083 0.391 B_Memory LOneK1K
ENSG00000006555 TTC22 228999 sc-eQTL 8.88e-01 -0.0125 0.0888 0.391 B_Naive LOneK1K
ENSG00000116133 DHCR24 143127 sc-eQTL 3.77e-01 0.0708 0.0799 0.391 B_Naive LOneK1K
ENSG00000116205 TCEANC2 976738 sc-eQTL 2.83e-01 0.0776 0.0721 0.391 B_Naive LOneK1K
ENSG00000116209 TMEM59 976818 sc-eQTL 8.72e-01 0.00826 0.0514 0.391 B_Naive LOneK1K
ENSG00000116221 MRPL37 846281 sc-eQTL 9.51e-01 -0.00452 0.0739 0.391 B_Naive LOneK1K
ENSG00000157216 SSBP3 616843 sc-eQTL 8.76e-01 -0.0104 0.0661 0.391 B_Naive LOneK1K
ENSG00000162402 USP24 -185042 sc-eQTL 9.07e-01 -0.00662 0.0567 0.391 B_Naive LOneK1K
ENSG00000215883 CYB5RL 830286 sc-eQTL 3.90e-01 -0.0771 0.0896 0.391 B_Naive LOneK1K
ENSG00000243725 TTC4 314461 sc-eQTL 7.01e-01 0.0324 0.0844 0.391 B_Naive LOneK1K
ENSG00000116133 DHCR24 143127 sc-eQTL 6.18e-01 -0.0252 0.0505 0.391 CD14_Mono LOneK1K
ENSG00000116205 TCEANC2 976738 sc-eQTL 1.42e-01 -0.0926 0.0629 0.391 CD14_Mono LOneK1K
ENSG00000116209 TMEM59 976818 sc-eQTL 2.13e-01 0.0543 0.0434 0.391 CD14_Mono LOneK1K
ENSG00000116221 MRPL37 846281 sc-eQTL 6.67e-01 0.0333 0.0771 0.391 CD14_Mono LOneK1K
ENSG00000157216 SSBP3 616843 sc-eQTL 4.52e-01 0.0607 0.0807 0.391 CD14_Mono LOneK1K
ENSG00000162402 USP24 -185042 sc-eQTL 5.65e-02 -0.105 0.0547 0.391 CD14_Mono LOneK1K
ENSG00000243725 TTC4 314461 sc-eQTL 1.31e-01 0.138 0.091 0.391 CD14_Mono LOneK1K
ENSG00000116133 DHCR24 143127 sc-eQTL 6.77e-01 0.0259 0.062 0.388 CD16_Mono LOneK1K
ENSG00000116205 TCEANC2 976738 sc-eQTL 2.33e-01 0.0971 0.0812 0.388 CD16_Mono LOneK1K
ENSG00000116209 TMEM59 976818 sc-eQTL 4.54e-01 0.0453 0.0605 0.388 CD16_Mono LOneK1K
ENSG00000116221 MRPL37 846281 sc-eQTL 1.09e-01 0.133 0.0825 0.388 CD16_Mono LOneK1K
ENSG00000157216 SSBP3 616843 sc-eQTL 3.78e-01 0.0781 0.0883 0.388 CD16_Mono LOneK1K
ENSG00000162402 USP24 -185042 sc-eQTL 5.72e-01 0.0394 0.0697 0.388 CD16_Mono LOneK1K
ENSG00000243725 TTC4 314461 sc-eQTL 8.97e-01 -0.0114 0.0875 0.388 CD16_Mono LOneK1K
ENSG00000006555 TTC22 228999 sc-eQTL 8.09e-01 0.0176 0.0727 0.392 NK_CD56dim LOneK1K
ENSG00000116133 DHCR24 143127 sc-eQTL 8.11e-01 0.0182 0.0759 0.392 NK_CD56dim LOneK1K
ENSG00000116205 TCEANC2 976738 sc-eQTL 8.46e-01 0.0145 0.0744 0.392 NK_CD56dim LOneK1K
ENSG00000116209 TMEM59 976818 sc-eQTL 4.63e-01 -0.0423 0.0575 0.392 NK_CD56dim LOneK1K
ENSG00000116221 MRPL37 846281 sc-eQTL 3.96e-01 0.0655 0.077 0.392 NK_CD56dim LOneK1K
ENSG00000157216 SSBP3 616843 sc-eQTL 2.01e-01 0.0808 0.063 0.392 NK_CD56dim LOneK1K
ENSG00000162398 LEXM 224259 sc-eQTL 7.61e-01 0.0217 0.0713 0.392 NK_CD56dim LOneK1K
ENSG00000162402 USP24 -185042 sc-eQTL 6.45e-01 -0.0208 0.0452 0.392 NK_CD56dim LOneK1K
ENSG00000243725 TTC4 314461 sc-eQTL 2.92e-01 -0.0849 0.0803 0.392 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000169174 PCSK9 -9226 pQTL 0.0265 -0.0613 0.0276 0.0 0.0 0.392
ENSG00000169174 PCSK9 -9226 eQTL 4.49e-06 -0.0779 0.0169 0.0 0.00215 0.387

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116133 \N 143127 4.3e-06 4.67e-06 8.52e-07 2.65e-06 1.21e-06 1.33e-06 3.57e-06 1.03e-06 4.96e-06 2.44e-06 4.65e-06 3.5e-06 7.43e-06 2.15e-06 1.43e-06 3.32e-06 2.04e-06 2.78e-06 1.29e-06 1.14e-06 2.85e-06 4.6e-06 3.38e-06 1.36e-06 5.16e-06 1.33e-06 2.62e-06 1.79e-06 4.26e-06 3.06e-06 2.38e-06 4.15e-07 5.68e-07 1.79e-06 2.03e-06 9.59e-07 9.48e-07 4.24e-07 9.26e-07 5.32e-07 6.93e-07 5.32e-06 3.99e-07 1.83e-07 5.95e-07 6.75e-07 9.74e-07 5.05e-07 3.89e-07
ENSG00000162402 \N -185042 2.66e-06 2.6e-06 4.23e-07 1.99e-06 4.78e-07 7.5e-07 2.13e-06 7.33e-07 2.27e-06 1.23e-06 2.52e-06 1.65e-06 3.83e-06 1.33e-06 8.99e-07 1.86e-06 1.24e-06 2.24e-06 1.15e-06 1.19e-06 1.43e-06 3.09e-06 2.38e-06 1.24e-06 3.57e-06 1.26e-06 1.47e-06 1.72e-06 2.16e-06 1.66e-06 1.9e-06 5.93e-07 6.22e-07 1.22e-06 1.45e-06 1.03e-06 8.9e-07 4.09e-07 1.28e-06 3.27e-07 3.2e-07 3.49e-06 6.14e-07 1.89e-07 3.27e-07 4e-07 8.55e-07 2.62e-07 1.56e-07
ENSG00000169174 PCSK9 -9226 4.93e-05 4.06e-05 8.75e-06 2.04e-05 9.35e-06 2.03e-05 5.71e-05 7.48e-06 4.81e-05 2.61e-05 6.01e-05 2.54e-05 7.16e-05 1.94e-05 1.09e-05 3.12e-05 2.66e-05 3.86e-05 1.26e-05 1.07e-05 2.65e-05 5.35e-05 4.27e-05 1.35e-05 6.31e-05 1.49e-05 2.29e-05 2.16e-05 4.44e-05 3.28e-05 3.18e-05 3.19e-06 5.7e-06 1.03e-05 1.68e-05 8.29e-06 5.01e-06 5.6e-06 7.72e-06 4.53e-06 2.02e-06 4.79e-05 4.89e-06 5.83e-07 4.04e-06 6.61e-06 6.9e-06 3.4e-06 2.51e-06