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Genes within 1Mb (chr1:55027937:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 226614 sc-eQTL 5.12e-01 -0.0531 0.0809 0.402 B L1
ENSG00000116133 DHCR24 140742 sc-eQTL 6.34e-01 0.0365 0.0765 0.402 B L1
ENSG00000116205 TCEANC2 974353 sc-eQTL 1.87e-01 0.087 0.0658 0.402 B L1
ENSG00000116209 TMEM59 974433 sc-eQTL 4.93e-01 0.0276 0.0402 0.402 B L1
ENSG00000116221 MRPL37 843896 sc-eQTL 7.56e-01 0.0164 0.0526 0.402 B L1
ENSG00000157216 SSBP3 614458 sc-eQTL 1.42e-01 -0.0808 0.0548 0.402 B L1
ENSG00000162402 USP24 -187427 sc-eQTL 7.33e-01 -0.0159 0.0467 0.402 B L1
ENSG00000215883 CYB5RL 827901 sc-eQTL 5.63e-01 -0.0521 0.0899 0.402 B L1
ENSG00000243725 TTC4 312076 sc-eQTL 8.60e-01 -0.0138 0.0782 0.402 B L1
ENSG00000006555 TTC22 226614 sc-eQTL 6.72e-01 0.0269 0.0633 0.402 CD4T L1
ENSG00000116205 TCEANC2 974353 sc-eQTL 4.44e-01 0.0397 0.0517 0.402 CD4T L1
ENSG00000116209 TMEM59 974433 sc-eQTL 6.94e-01 -0.019 0.0482 0.402 CD4T L1
ENSG00000116221 MRPL37 843896 sc-eQTL 4.46e-01 0.0509 0.0666 0.402 CD4T L1
ENSG00000157216 SSBP3 614458 sc-eQTL 3.64e-01 0.0503 0.0553 0.402 CD4T L1
ENSG00000162402 USP24 -187427 sc-eQTL 7.75e-01 -0.0129 0.0451 0.402 CD4T L1
ENSG00000243725 TTC4 312076 sc-eQTL 3.87e-02 -0.14 0.0672 0.402 CD4T L1
ENSG00000006555 TTC22 226614 sc-eQTL 4.63e-01 -0.0403 0.0549 0.402 CD8T L1
ENSG00000116205 TCEANC2 974353 sc-eQTL 4.70e-01 0.0495 0.0684 0.402 CD8T L1
ENSG00000116209 TMEM59 974433 sc-eQTL 7.26e-01 -0.0167 0.0475 0.402 CD8T L1
ENSG00000116221 MRPL37 843896 sc-eQTL 1.31e-01 0.0986 0.0651 0.402 CD8T L1
ENSG00000157216 SSBP3 614458 sc-eQTL 7.82e-01 0.013 0.047 0.402 CD8T L1
ENSG00000162402 USP24 -187427 sc-eQTL 2.43e-01 -0.0531 0.0453 0.402 CD8T L1
ENSG00000243725 TTC4 312076 sc-eQTL 2.58e-01 -0.0892 0.0786 0.402 CD8T L1
ENSG00000116133 DHCR24 140742 sc-eQTL 3.37e-01 0.0702 0.0729 0.403 DC L1
ENSG00000116205 TCEANC2 974353 sc-eQTL 1.32e-02 -0.201 0.0806 0.403 DC L1
ENSG00000116209 TMEM59 974433 sc-eQTL 3.57e-01 0.0592 0.0642 0.403 DC L1
ENSG00000116221 MRPL37 843896 sc-eQTL 9.61e-01 -0.00427 0.0864 0.403 DC L1
ENSG00000157216 SSBP3 614458 sc-eQTL 5.16e-01 -0.0501 0.077 0.403 DC L1
ENSG00000162390 ACOT11 485680 sc-eQTL 1.38e-01 0.11 0.0737 0.403 DC L1
ENSG00000162402 USP24 -187427 sc-eQTL 7.37e-02 0.0797 0.0443 0.403 DC L1
ENSG00000215883 CYB5RL 827901 sc-eQTL 8.80e-01 0.0122 0.0808 0.403 DC L1
ENSG00000243725 TTC4 312076 sc-eQTL 1.51e-01 0.125 0.0865 0.403 DC L1
ENSG00000116133 DHCR24 140742 sc-eQTL 5.45e-01 0.0321 0.0529 0.402 Mono L1
ENSG00000116205 TCEANC2 974353 sc-eQTL 4.77e-01 -0.0406 0.0571 0.402 Mono L1
ENSG00000116209 TMEM59 974433 sc-eQTL 5.82e-02 0.0801 0.0421 0.402 Mono L1
ENSG00000116221 MRPL37 843896 sc-eQTL 5.02e-01 0.0477 0.0709 0.402 Mono L1
ENSG00000157216 SSBP3 614458 sc-eQTL 3.93e-01 0.0695 0.0812 0.402 Mono L1
ENSG00000162402 USP24 -187427 sc-eQTL 4.00e-02 -0.0992 0.048 0.402 Mono L1
ENSG00000243725 TTC4 312076 sc-eQTL 3.89e-01 0.0736 0.0852 0.402 Mono L1
ENSG00000006555 TTC22 226614 sc-eQTL 7.67e-01 -0.0219 0.0737 0.401 NK L1
ENSG00000116133 DHCR24 140742 sc-eQTL 4.90e-01 0.0514 0.0743 0.401 NK L1
ENSG00000116205 TCEANC2 974353 sc-eQTL 6.44e-01 0.0339 0.0733 0.401 NK L1
ENSG00000116209 TMEM59 974433 sc-eQTL 4.74e-01 -0.0412 0.0574 0.401 NK L1
ENSG00000116221 MRPL37 843896 sc-eQTL 3.26e-01 0.0702 0.0713 0.401 NK L1
ENSG00000157216 SSBP3 614458 sc-eQTL 1.75e-01 0.084 0.0617 0.401 NK L1
ENSG00000162398 LEXM 221874 sc-eQTL 9.52e-01 -0.0042 0.0695 0.401 NK L1
ENSG00000162402 USP24 -187427 sc-eQTL 4.76e-01 -0.0301 0.0421 0.401 NK L1
ENSG00000243725 TTC4 312076 sc-eQTL 4.98e-01 -0.054 0.0796 0.401 NK L1
ENSG00000006555 TTC22 226614 sc-eQTL 6.74e-01 0.0273 0.0649 0.402 Other_T L1
ENSG00000116133 DHCR24 140742 sc-eQTL 1.33e-01 0.0755 0.0501 0.402 Other_T L1
ENSG00000116205 TCEANC2 974353 sc-eQTL 8.51e-01 0.0142 0.0753 0.402 Other_T L1
ENSG00000116209 TMEM59 974433 sc-eQTL 6.40e-01 -0.0242 0.0517 0.402 Other_T L1
ENSG00000116221 MRPL37 843896 sc-eQTL 3.17e-01 0.0484 0.0483 0.402 Other_T L1
ENSG00000157216 SSBP3 614458 sc-eQTL 7.65e-01 -0.0168 0.056 0.402 Other_T L1
ENSG00000162402 USP24 -187427 sc-eQTL 5.95e-01 -0.0318 0.0596 0.402 Other_T L1
ENSG00000215883 CYB5RL 827901 sc-eQTL 5.57e-01 0.048 0.0815 0.402 Other_T L1
ENSG00000243725 TTC4 312076 sc-eQTL 4.61e-01 -0.0599 0.0811 0.402 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 226614 sc-eQTL 6.64e-01 -0.0295 0.0678 0.395 B_Activated L2
ENSG00000116133 DHCR24 140742 sc-eQTL 8.46e-01 0.0155 0.0797 0.395 B_Activated L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 4.47e-01 -0.0651 0.0854 0.395 B_Activated L2
ENSG00000116209 TMEM59 974433 sc-eQTL 8.46e-01 0.0177 0.0909 0.395 B_Activated L2
ENSG00000116221 MRPL37 843896 sc-eQTL 8.13e-01 -0.0232 0.0982 0.395 B_Activated L2
ENSG00000157216 SSBP3 614458 sc-eQTL 7.77e-01 0.0252 0.0889 0.395 B_Activated L2
ENSG00000162402 USP24 -187427 sc-eQTL 6.14e-02 0.162 0.0859 0.395 B_Activated L2
ENSG00000215883 CYB5RL 827901 sc-eQTL 8.13e-01 -0.0182 0.0766 0.395 B_Activated L2
ENSG00000243725 TTC4 312076 sc-eQTL 3.81e-01 0.0728 0.0829 0.395 B_Activated L2
ENSG00000006555 TTC22 226614 sc-eQTL 7.55e-01 0.0272 0.0868 0.401 B_Intermediate L2
ENSG00000116133 DHCR24 140742 sc-eQTL 6.29e-01 0.039 0.0806 0.401 B_Intermediate L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 2.17e-01 0.0991 0.08 0.401 B_Intermediate L2
ENSG00000116209 TMEM59 974433 sc-eQTL 3.84e-01 0.0598 0.0686 0.401 B_Intermediate L2
ENSG00000116221 MRPL37 843896 sc-eQTL 1.41e-01 0.119 0.0804 0.401 B_Intermediate L2
ENSG00000157216 SSBP3 614458 sc-eQTL 3.26e-01 -0.0742 0.0754 0.401 B_Intermediate L2
ENSG00000162402 USP24 -187427 sc-eQTL 2.79e-01 -0.0688 0.0634 0.401 B_Intermediate L2
ENSG00000215883 CYB5RL 827901 sc-eQTL 8.35e-01 -0.0188 0.09 0.401 B_Intermediate L2
ENSG00000243725 TTC4 312076 sc-eQTL 9.94e-01 -0.000625 0.0819 0.401 B_Intermediate L2
ENSG00000006555 TTC22 226614 sc-eQTL 2.09e-01 -0.103 0.0815 0.403 B_Memory L2
ENSG00000116133 DHCR24 140742 sc-eQTL 8.26e-01 -0.0179 0.0812 0.403 B_Memory L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 8.02e-01 -0.0218 0.0868 0.403 B_Memory L2
ENSG00000116209 TMEM59 974433 sc-eQTL 8.64e-01 0.0124 0.0724 0.403 B_Memory L2
ENSG00000116221 MRPL37 843896 sc-eQTL 3.96e-01 0.0623 0.0732 0.403 B_Memory L2
ENSG00000157216 SSBP3 614458 sc-eQTL 1.06e-01 -0.111 0.068 0.403 B_Memory L2
ENSG00000162402 USP24 -187427 sc-eQTL 6.27e-01 -0.0326 0.0669 0.403 B_Memory L2
ENSG00000215883 CYB5RL 827901 sc-eQTL 7.52e-03 -0.22 0.0814 0.403 B_Memory L2
ENSG00000243725 TTC4 312076 sc-eQTL 9.12e-01 0.00954 0.0858 0.403 B_Memory L2
ENSG00000006555 TTC22 226614 sc-eQTL 6.03e-01 -0.0448 0.0861 0.402 B_Naive1 L2
ENSG00000116133 DHCR24 140742 sc-eQTL 4.30e-01 0.0638 0.0806 0.402 B_Naive1 L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 1.80e-01 0.0965 0.0717 0.402 B_Naive1 L2
ENSG00000116209 TMEM59 974433 sc-eQTL 6.82e-01 -0.0215 0.0523 0.402 B_Naive1 L2
ENSG00000116221 MRPL37 843896 sc-eQTL 9.40e-01 -0.00585 0.0772 0.402 B_Naive1 L2
ENSG00000157216 SSBP3 614458 sc-eQTL 6.34e-01 -0.035 0.0735 0.402 B_Naive1 L2
ENSG00000162402 USP24 -187427 sc-eQTL 2.70e-01 -0.0638 0.0577 0.402 B_Naive1 L2
ENSG00000215883 CYB5RL 827901 sc-eQTL 5.55e-01 -0.0516 0.0873 0.402 B_Naive1 L2
ENSG00000243725 TTC4 312076 sc-eQTL 4.96e-01 0.0538 0.0788 0.402 B_Naive1 L2
ENSG00000006555 TTC22 226614 sc-eQTL 9.36e-01 -0.00695 0.0863 0.401 B_Naive2 L2
ENSG00000116133 DHCR24 140742 sc-eQTL 2.28e-01 0.0906 0.0749 0.401 B_Naive2 L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 7.80e-01 0.0234 0.0834 0.401 B_Naive2 L2
ENSG00000116209 TMEM59 974433 sc-eQTL 1.34e-01 0.103 0.0683 0.401 B_Naive2 L2
ENSG00000116221 MRPL37 843896 sc-eQTL 8.40e-01 0.0163 0.0808 0.401 B_Naive2 L2
ENSG00000157216 SSBP3 614458 sc-eQTL 8.44e-01 0.0157 0.0796 0.401 B_Naive2 L2
ENSG00000162402 USP24 -187427 sc-eQTL 8.20e-01 0.0144 0.0631 0.401 B_Naive2 L2
ENSG00000215883 CYB5RL 827901 sc-eQTL 9.31e-01 -0.00766 0.0888 0.401 B_Naive2 L2
ENSG00000243725 TTC4 312076 sc-eQTL 9.37e-01 -0.00726 0.0924 0.401 B_Naive2 L2
ENSG00000006555 TTC22 226614 sc-eQTL 6.29e-01 -0.0404 0.0835 0.405 CD4_CTL L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 2.77e-02 0.188 0.0849 0.405 CD4_CTL L2
ENSG00000116209 TMEM59 974433 sc-eQTL 6.89e-01 0.0313 0.0781 0.405 CD4_CTL L2
ENSG00000116221 MRPL37 843896 sc-eQTL 1.73e-03 0.298 0.0937 0.405 CD4_CTL L2
ENSG00000157216 SSBP3 614458 sc-eQTL 4.63e-01 -0.0434 0.059 0.405 CD4_CTL L2
ENSG00000162402 USP24 -187427 sc-eQTL 8.95e-01 -0.0107 0.0812 0.405 CD4_CTL L2
ENSG00000243725 TTC4 312076 sc-eQTL 4.71e-01 0.0655 0.0908 0.405 CD4_CTL L2
ENSG00000006555 TTC22 226614 sc-eQTL 4.70e-01 0.0537 0.0742 0.402 CD4_Naive L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 8.22e-01 0.0127 0.0565 0.402 CD4_Naive L2
ENSG00000116209 TMEM59 974433 sc-eQTL 3.21e-01 -0.0546 0.0549 0.402 CD4_Naive L2
ENSG00000116221 MRPL37 843896 sc-eQTL 4.54e-01 0.0531 0.0708 0.402 CD4_Naive L2
ENSG00000157216 SSBP3 614458 sc-eQTL 1.20e-01 0.0878 0.0562 0.402 CD4_Naive L2
ENSG00000162402 USP24 -187427 sc-eQTL 8.61e-01 -0.00857 0.0488 0.402 CD4_Naive L2
ENSG00000243725 TTC4 312076 sc-eQTL 4.06e-02 -0.152 0.0736 0.402 CD4_Naive L2
ENSG00000006555 TTC22 226614 sc-eQTL 6.36e-01 0.0372 0.0785 0.402 CD4_TCM L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 8.75e-01 0.012 0.0764 0.402 CD4_TCM L2
ENSG00000116209 TMEM59 974433 sc-eQTL 8.46e-01 0.0112 0.0576 0.402 CD4_TCM L2
ENSG00000116221 MRPL37 843896 sc-eQTL 8.35e-01 -0.0151 0.0725 0.402 CD4_TCM L2
ENSG00000157216 SSBP3 614458 sc-eQTL 1.48e-01 0.103 0.0707 0.402 CD4_TCM L2
ENSG00000162402 USP24 -187427 sc-eQTL 8.24e-01 -0.0131 0.0589 0.402 CD4_TCM L2
ENSG00000243725 TTC4 312076 sc-eQTL 6.87e-01 -0.0343 0.0848 0.402 CD4_TCM L2
ENSG00000006555 TTC22 226614 sc-eQTL 5.48e-01 -0.0536 0.0891 0.402 CD4_TEM L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 2.49e-01 -0.0973 0.0842 0.402 CD4_TEM L2
ENSG00000116209 TMEM59 974433 sc-eQTL 6.43e-01 0.0304 0.0654 0.402 CD4_TEM L2
ENSG00000116221 MRPL37 843896 sc-eQTL 8.87e-01 0.012 0.0842 0.402 CD4_TEM L2
ENSG00000157216 SSBP3 614458 sc-eQTL 6.10e-01 0.0369 0.0722 0.402 CD4_TEM L2
ENSG00000162402 USP24 -187427 sc-eQTL 5.12e-01 -0.0431 0.0656 0.402 CD4_TEM L2
ENSG00000243725 TTC4 312076 sc-eQTL 4.73e-01 0.0624 0.0868 0.402 CD4_TEM L2
ENSG00000006555 TTC22 226614 sc-eQTL 3.68e-01 -0.0639 0.0709 0.402 CD8_CTL L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 5.84e-01 0.0431 0.0786 0.402 CD8_CTL L2
ENSG00000116209 TMEM59 974433 sc-eQTL 8.46e-01 0.0133 0.0684 0.402 CD8_CTL L2
ENSG00000116221 MRPL37 843896 sc-eQTL 2.18e-02 0.185 0.08 0.402 CD8_CTL L2
ENSG00000157216 SSBP3 614458 sc-eQTL 3.60e-01 -0.0507 0.0553 0.402 CD8_CTL L2
ENSG00000162402 USP24 -187427 sc-eQTL 9.28e-01 0.00501 0.0551 0.402 CD8_CTL L2
ENSG00000243725 TTC4 312076 sc-eQTL 1.09e-02 -0.208 0.0812 0.402 CD8_CTL L2
ENSG00000006555 TTC22 226614 sc-eQTL 1.21e-01 -0.126 0.0809 0.402 CD8_Naive L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 5.89e-01 0.0398 0.0735 0.402 CD8_Naive L2
ENSG00000116209 TMEM59 974433 sc-eQTL 1.13e-01 -0.114 0.0715 0.402 CD8_Naive L2
ENSG00000116221 MRPL37 843896 sc-eQTL 1.20e-01 0.134 0.0859 0.402 CD8_Naive L2
ENSG00000157216 SSBP3 614458 sc-eQTL 1.32e-01 0.0982 0.065 0.402 CD8_Naive L2
ENSG00000162402 USP24 -187427 sc-eQTL 6.95e-01 0.0233 0.0594 0.402 CD8_Naive L2
ENSG00000243725 TTC4 312076 sc-eQTL 6.09e-01 0.0445 0.0869 0.402 CD8_Naive L2
ENSG00000006555 TTC22 226614 sc-eQTL 6.14e-02 0.162 0.0862 0.412 CD8_TCM L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 5.92e-01 0.047 0.0874 0.412 CD8_TCM L2
ENSG00000116209 TMEM59 974433 sc-eQTL 2.00e-01 0.0985 0.0767 0.412 CD8_TCM L2
ENSG00000116221 MRPL37 843896 sc-eQTL 8.95e-01 0.0115 0.0873 0.412 CD8_TCM L2
ENSG00000157216 SSBP3 614458 sc-eQTL 5.78e-01 -0.0422 0.0757 0.412 CD8_TCM L2
ENSG00000162402 USP24 -187427 sc-eQTL 9.07e-01 -0.0086 0.0735 0.412 CD8_TCM L2
ENSG00000243725 TTC4 312076 sc-eQTL 4.83e-01 0.0627 0.0892 0.412 CD8_TCM L2
ENSG00000006555 TTC22 226614 sc-eQTL 8.91e-01 -0.0117 0.0846 0.402 CD8_TEM L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 2.68e-01 -0.0977 0.088 0.402 CD8_TEM L2
ENSG00000116209 TMEM59 974433 sc-eQTL 5.36e-01 -0.053 0.0854 0.402 CD8_TEM L2
ENSG00000116221 MRPL37 843896 sc-eQTL 3.36e-01 0.0833 0.0864 0.402 CD8_TEM L2
ENSG00000157216 SSBP3 614458 sc-eQTL 6.24e-01 -0.0402 0.0818 0.402 CD8_TEM L2
ENSG00000162402 USP24 -187427 sc-eQTL 7.23e-01 -0.0306 0.0863 0.402 CD8_TEM L2
ENSG00000243725 TTC4 312076 sc-eQTL 4.27e-01 -0.0696 0.0876 0.402 CD8_TEM L2
ENSG00000006555 TTC22 226614 sc-eQTL 5.47e-01 0.0464 0.0769 0.4 MAIT L2
ENSG00000116133 DHCR24 140742 sc-eQTL 9.19e-01 -0.00583 0.057 0.4 MAIT L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 8.30e-01 0.0172 0.0802 0.4 MAIT L2
ENSG00000116209 TMEM59 974433 sc-eQTL 4.08e-01 0.0599 0.0723 0.4 MAIT L2
ENSG00000116221 MRPL37 843896 sc-eQTL 5.13e-01 0.0576 0.088 0.4 MAIT L2
ENSG00000157216 SSBP3 614458 sc-eQTL 3.00e-01 -0.0808 0.0778 0.4 MAIT L2
ENSG00000162402 USP24 -187427 sc-eQTL 6.76e-01 -0.029 0.0693 0.4 MAIT L2
ENSG00000215883 CYB5RL 827901 sc-eQTL 5.83e-01 0.0442 0.0805 0.4 MAIT L2
ENSG00000243725 TTC4 312076 sc-eQTL 8.63e-01 0.0138 0.08 0.4 MAIT L2
ENSG00000006555 TTC22 226614 sc-eQTL 9.34e-01 -0.0074 0.0896 0.398 NK_CD56bright L2
ENSG00000116133 DHCR24 140742 sc-eQTL 4.51e-02 0.158 0.0784 0.398 NK_CD56bright L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 9.77e-01 0.00239 0.0836 0.398 NK_CD56bright L2
ENSG00000116209 TMEM59 974433 sc-eQTL 6.05e-01 -0.0422 0.0815 0.398 NK_CD56bright L2
ENSG00000116221 MRPL37 843896 sc-eQTL 5.76e-03 0.25 0.0894 0.398 NK_CD56bright L2
ENSG00000157216 SSBP3 614458 sc-eQTL 2.67e-01 -0.0762 0.0685 0.398 NK_CD56bright L2
ENSG00000162398 LEXM 221874 sc-eQTL 6.28e-01 0.0394 0.0811 0.398 NK_CD56bright L2
ENSG00000162402 USP24 -187427 sc-eQTL 2.60e-01 -0.0785 0.0696 0.398 NK_CD56bright L2
ENSG00000243725 TTC4 312076 sc-eQTL 9.56e-01 -0.00491 0.088 0.398 NK_CD56bright L2
ENSG00000006555 TTC22 226614 sc-eQTL 3.99e-01 -0.0624 0.0738 0.403 NK_CD56dim L2
ENSG00000116133 DHCR24 140742 sc-eQTL 5.29e-01 0.0486 0.077 0.403 NK_CD56dim L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 6.29e-01 0.0404 0.0834 0.403 NK_CD56dim L2
ENSG00000116209 TMEM59 974433 sc-eQTL 6.12e-01 0.0314 0.0619 0.403 NK_CD56dim L2
ENSG00000116221 MRPL37 843896 sc-eQTL 5.66e-01 0.0463 0.0805 0.403 NK_CD56dim L2
ENSG00000157216 SSBP3 614458 sc-eQTL 1.52e-01 0.0944 0.0656 0.403 NK_CD56dim L2
ENSG00000162398 LEXM 221874 sc-eQTL 4.71e-01 -0.0546 0.0757 0.403 NK_CD56dim L2
ENSG00000162402 USP24 -187427 sc-eQTL 9.19e-01 -0.0049 0.0482 0.403 NK_CD56dim L2
ENSG00000243725 TTC4 312076 sc-eQTL 5.06e-02 -0.161 0.0817 0.403 NK_CD56dim L2
ENSG00000006555 TTC22 226614 sc-eQTL 8.12e-01 0.0216 0.0906 0.397 NK_HLA L2
ENSG00000116133 DHCR24 140742 sc-eQTL 9.42e-01 -0.00644 0.0884 0.397 NK_HLA L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 1.36e-01 0.127 0.0848 0.397 NK_HLA L2
ENSG00000116209 TMEM59 974433 sc-eQTL 6.04e-01 0.044 0.0846 0.397 NK_HLA L2
ENSG00000116221 MRPL37 843896 sc-eQTL 1.38e-01 0.138 0.0928 0.397 NK_HLA L2
ENSG00000157216 SSBP3 614458 sc-eQTL 3.79e-01 0.067 0.076 0.397 NK_HLA L2
ENSG00000162398 LEXM 221874 sc-eQTL 5.30e-01 0.0539 0.0858 0.397 NK_HLA L2
ENSG00000162402 USP24 -187427 sc-eQTL 3.59e-01 0.0578 0.0629 0.397 NK_HLA L2
ENSG00000243725 TTC4 312076 sc-eQTL 4.30e-01 0.0743 0.094 0.397 NK_HLA L2
ENSG00000006555 TTC22 226614 sc-eQTL 6.15e-01 0.0394 0.0782 0.403 NK_cytokine L2
ENSG00000116133 DHCR24 140742 sc-eQTL 9.94e-01 -0.000628 0.0791 0.403 NK_cytokine L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 9.12e-01 -0.00873 0.0785 0.403 NK_cytokine L2
ENSG00000116209 TMEM59 974433 sc-eQTL 3.34e-01 -0.0617 0.0637 0.403 NK_cytokine L2
ENSG00000116221 MRPL37 843896 sc-eQTL 7.88e-01 0.0211 0.0787 0.403 NK_cytokine L2
ENSG00000157216 SSBP3 614458 sc-eQTL 2.54e-02 0.147 0.0652 0.403 NK_cytokine L2
ENSG00000162398 LEXM 221874 sc-eQTL 9.50e-01 -0.0052 0.0825 0.403 NK_cytokine L2
ENSG00000162402 USP24 -187427 sc-eQTL 2.90e-01 -0.0594 0.0561 0.403 NK_cytokine L2
ENSG00000243725 TTC4 312076 sc-eQTL 6.14e-01 -0.0421 0.0833 0.403 NK_cytokine L2
ENSG00000006555 TTC22 226614 sc-eQTL 9.81e-01 -0.00228 0.096 0.396 PB L2
ENSG00000116133 DHCR24 140742 sc-eQTL 4.55e-01 -0.0636 0.0848 0.396 PB L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 5.99e-01 -0.0545 0.103 0.396 PB L2
ENSG00000116209 TMEM59 974433 sc-eQTL 2.11e-01 0.0541 0.043 0.396 PB L2
ENSG00000116221 MRPL37 843896 sc-eQTL 2.78e-01 -0.0854 0.0782 0.396 PB L2
ENSG00000157216 SSBP3 614458 sc-eQTL 7.60e-01 -0.0278 0.0908 0.396 PB L2
ENSG00000162402 USP24 -187427 sc-eQTL 3.38e-01 0.0989 0.103 0.396 PB L2
ENSG00000215883 CYB5RL 827901 sc-eQTL 4.38e-01 -0.083 0.107 0.396 PB L2
ENSG00000243725 TTC4 312076 sc-eQTL 4.93e-01 0.0685 0.0997 0.396 PB L2
ENSG00000006555 TTC22 226614 sc-eQTL 1.32e-01 -0.12 0.0793 0.404 Pro_T L2
ENSG00000116133 DHCR24 140742 sc-eQTL 2.82e-02 0.148 0.067 0.404 Pro_T L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 3.94e-01 0.0706 0.0826 0.404 Pro_T L2
ENSG00000116209 TMEM59 974433 sc-eQTL 5.10e-01 -0.0379 0.0573 0.404 Pro_T L2
ENSG00000116221 MRPL37 843896 sc-eQTL 9.13e-01 0.00618 0.0562 0.404 Pro_T L2
ENSG00000157216 SSBP3 614458 sc-eQTL 5.07e-01 -0.0419 0.063 0.404 Pro_T L2
ENSG00000162402 USP24 -187427 sc-eQTL 9.30e-01 -0.0068 0.0769 0.404 Pro_T L2
ENSG00000215883 CYB5RL 827901 sc-eQTL 4.62e-01 0.0559 0.0758 0.404 Pro_T L2
ENSG00000243725 TTC4 312076 sc-eQTL 7.09e-01 -0.0315 0.0844 0.404 Pro_T L2
ENSG00000006555 TTC22 226614 sc-eQTL 2.14e-01 0.0983 0.079 0.402 Treg L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 2.88e-01 0.0903 0.0847 0.402 Treg L2
ENSG00000116209 TMEM59 974433 sc-eQTL 9.24e-01 0.00643 0.0671 0.402 Treg L2
ENSG00000116221 MRPL37 843896 sc-eQTL 7.62e-01 -0.0251 0.083 0.402 Treg L2
ENSG00000157216 SSBP3 614458 sc-eQTL 7.07e-01 -0.0279 0.0741 0.402 Treg L2
ENSG00000162402 USP24 -187427 sc-eQTL 7.75e-01 0.0202 0.0706 0.402 Treg L2
ENSG00000243725 TTC4 312076 sc-eQTL 5.82e-01 -0.049 0.0888 0.402 Treg L2
ENSG00000116133 DHCR24 140742 sc-eQTL 2.95e-01 0.0748 0.0713 0.407 cDC L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 1.26e-02 -0.209 0.0829 0.407 cDC L2
ENSG00000116209 TMEM59 974433 sc-eQTL 9.58e-01 -0.00378 0.0717 0.407 cDC L2
ENSG00000116221 MRPL37 843896 sc-eQTL 2.16e-01 -0.113 0.0913 0.407 cDC L2
ENSG00000157216 SSBP3 614458 sc-eQTL 3.95e-01 -0.0718 0.0843 0.407 cDC L2
ENSG00000162390 ACOT11 485680 sc-eQTL 1.13e-01 0.124 0.078 0.407 cDC L2
ENSG00000162402 USP24 -187427 sc-eQTL 9.82e-01 0.00201 0.0881 0.407 cDC L2
ENSG00000215883 CYB5RL 827901 sc-eQTL 5.29e-01 -0.0477 0.0756 0.407 cDC L2
ENSG00000243725 TTC4 312076 sc-eQTL 8.51e-02 0.155 0.0897 0.407 cDC L2
ENSG00000116133 DHCR24 140742 sc-eQTL 2.83e-01 -0.0556 0.0517 0.402 cMono_IL1B L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 4.76e-01 -0.0513 0.0719 0.402 cMono_IL1B L2
ENSG00000116209 TMEM59 974433 sc-eQTL 1.35e-01 0.0651 0.0434 0.402 cMono_IL1B L2
ENSG00000116221 MRPL37 843896 sc-eQTL 7.98e-01 0.0199 0.0778 0.402 cMono_IL1B L2
ENSG00000157216 SSBP3 614458 sc-eQTL 7.38e-01 0.0266 0.0794 0.402 cMono_IL1B L2
ENSG00000162402 USP24 -187427 sc-eQTL 5.06e-02 -0.114 0.0581 0.402 cMono_IL1B L2
ENSG00000243725 TTC4 312076 sc-eQTL 1.14e-01 0.142 0.0892 0.402 cMono_IL1B L2
ENSG00000116133 DHCR24 140742 sc-eQTL 7.66e-02 0.0856 0.0481 0.402 cMono_S100A L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 1.65e-01 -0.102 0.0736 0.402 cMono_S100A L2
ENSG00000116209 TMEM59 974433 sc-eQTL 4.45e-01 0.0452 0.0591 0.402 cMono_S100A L2
ENSG00000116221 MRPL37 843896 sc-eQTL 7.46e-01 -0.0277 0.0855 0.402 cMono_S100A L2
ENSG00000157216 SSBP3 614458 sc-eQTL 7.32e-01 0.0304 0.0887 0.402 cMono_S100A L2
ENSG00000162402 USP24 -187427 sc-eQTL 9.39e-01 -0.00549 0.0718 0.402 cMono_S100A L2
ENSG00000243725 TTC4 312076 sc-eQTL 9.55e-01 -0.00503 0.0899 0.402 cMono_S100A L2
ENSG00000006555 TTC22 226614 sc-eQTL 4.29e-01 0.0652 0.0822 0.391 gdT L2
ENSG00000116133 DHCR24 140742 sc-eQTL 9.12e-01 0.0101 0.0918 0.391 gdT L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 3.82e-01 0.0808 0.092 0.391 gdT L2
ENSG00000116209 TMEM59 974433 sc-eQTL 9.05e-01 -0.0112 0.0936 0.391 gdT L2
ENSG00000116221 MRPL37 843896 sc-eQTL 7.86e-02 0.188 0.106 0.391 gdT L2
ENSG00000157216 SSBP3 614458 sc-eQTL 4.46e-01 0.0501 0.0656 0.391 gdT L2
ENSG00000162402 USP24 -187427 sc-eQTL 7.39e-01 -0.0295 0.0882 0.391 gdT L2
ENSG00000215883 CYB5RL 827901 sc-eQTL 3.51e-01 -0.0856 0.0915 0.391 gdT L2
ENSG00000243725 TTC4 312076 sc-eQTL 8.80e-01 -0.0157 0.103 0.391 gdT L2
ENSG00000116133 DHCR24 140742 sc-eQTL 9.55e-01 0.0037 0.0658 0.404 intMono L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 4.98e-03 0.228 0.0804 0.404 intMono L2
ENSG00000116209 TMEM59 974433 sc-eQTL 3.75e-01 0.0535 0.0601 0.404 intMono L2
ENSG00000116221 MRPL37 843896 sc-eQTL 2.75e-01 0.101 0.0918 0.404 intMono L2
ENSG00000157216 SSBP3 614458 sc-eQTL 3.78e-01 0.0828 0.0938 0.404 intMono L2
ENSG00000162402 USP24 -187427 sc-eQTL 7.33e-01 0.0286 0.0838 0.404 intMono L2
ENSG00000243725 TTC4 312076 sc-eQTL 9.82e-01 0.00199 0.0893 0.404 intMono L2
ENSG00000116133 DHCR24 140742 sc-eQTL 5.24e-01 0.0407 0.0638 0.394 ncMono L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 7.37e-01 -0.0268 0.0798 0.394 ncMono L2
ENSG00000116209 TMEM59 974433 sc-eQTL 9.80e-01 -0.0016 0.0638 0.394 ncMono L2
ENSG00000116221 MRPL37 843896 sc-eQTL 9.35e-02 0.138 0.0818 0.394 ncMono L2
ENSG00000157216 SSBP3 614458 sc-eQTL 9.44e-01 0.00633 0.0901 0.394 ncMono L2
ENSG00000162402 USP24 -187427 sc-eQTL 9.78e-01 -0.00203 0.072 0.394 ncMono L2
ENSG00000243725 TTC4 312076 sc-eQTL 9.40e-01 0.00646 0.0852 0.394 ncMono L2
ENSG00000116133 DHCR24 140742 sc-eQTL 4.03e-01 0.0637 0.0758 0.407 pDC L2
ENSG00000116205 TCEANC2 974353 sc-eQTL 1.80e-02 -0.214 0.0895 0.407 pDC L2
ENSG00000116209 TMEM59 974433 sc-eQTL 1.65e-01 0.101 0.0723 0.407 pDC L2
ENSG00000116221 MRPL37 843896 sc-eQTL 4.08e-02 0.197 0.0954 0.407 pDC L2
ENSG00000157216 SSBP3 614458 sc-eQTL 1.41e-01 -0.126 0.0853 0.407 pDC L2
ENSG00000162390 ACOT11 485680 sc-eQTL 6.25e-01 0.0177 0.0361 0.407 pDC L2
ENSG00000162402 USP24 -187427 sc-eQTL 4.97e-01 0.0414 0.0609 0.407 pDC L2
ENSG00000215883 CYB5RL 827901 sc-eQTL 4.01e-01 0.07 0.0832 0.407 pDC L2
ENSG00000243725 TTC4 312076 sc-eQTL 8.71e-01 -0.0156 0.0963 0.407 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 226614 sc-eQTL 4.60e-01 -0.0614 0.0829 0.402 B_Memory LOneK1K
ENSG00000116133 DHCR24 140742 sc-eQTL 9.88e-01 -0.00125 0.0833 0.402 B_Memory LOneK1K
ENSG00000116205 TCEANC2 974353 sc-eQTL 5.55e-01 0.0476 0.0805 0.402 B_Memory LOneK1K
ENSG00000116209 TMEM59 974433 sc-eQTL 4.69e-01 0.0454 0.0626 0.402 B_Memory LOneK1K
ENSG00000116221 MRPL37 843896 sc-eQTL 2.21e-01 0.0917 0.0748 0.402 B_Memory LOneK1K
ENSG00000157216 SSBP3 614458 sc-eQTL 1.80e-01 -0.0874 0.065 0.402 B_Memory LOneK1K
ENSG00000162402 USP24 -187427 sc-eQTL 7.34e-01 -0.0202 0.0595 0.402 B_Memory LOneK1K
ENSG00000215883 CYB5RL 827901 sc-eQTL 6.89e-02 -0.166 0.0907 0.402 B_Memory LOneK1K
ENSG00000243725 TTC4 312076 sc-eQTL 7.87e-01 0.0222 0.0821 0.402 B_Memory LOneK1K
ENSG00000006555 TTC22 226614 sc-eQTL 6.91e-01 -0.0347 0.0871 0.402 B_Naive LOneK1K
ENSG00000116133 DHCR24 140742 sc-eQTL 1.67e-01 0.108 0.0782 0.402 B_Naive LOneK1K
ENSG00000116205 TCEANC2 974353 sc-eQTL 2.68e-01 0.0786 0.0707 0.402 B_Naive LOneK1K
ENSG00000116209 TMEM59 974433 sc-eQTL 6.09e-01 0.0258 0.0504 0.402 B_Naive LOneK1K
ENSG00000116221 MRPL37 843896 sc-eQTL 9.55e-01 0.00407 0.0725 0.402 B_Naive LOneK1K
ENSG00000157216 SSBP3 614458 sc-eQTL 9.22e-01 -0.00639 0.0648 0.402 B_Naive LOneK1K
ENSG00000162402 USP24 -187427 sc-eQTL 5.88e-01 -0.0301 0.0556 0.402 B_Naive LOneK1K
ENSG00000215883 CYB5RL 827901 sc-eQTL 5.04e-01 -0.0589 0.0879 0.402 B_Naive LOneK1K
ENSG00000243725 TTC4 312076 sc-eQTL 9.78e-01 0.00228 0.0828 0.402 B_Naive LOneK1K
ENSG00000116133 DHCR24 140742 sc-eQTL 9.23e-01 -0.00484 0.05 0.402 CD14_Mono LOneK1K
ENSG00000116205 TCEANC2 974353 sc-eQTL 1.66e-01 -0.0865 0.0623 0.402 CD14_Mono LOneK1K
ENSG00000116209 TMEM59 974433 sc-eQTL 1.94e-01 0.0559 0.043 0.402 CD14_Mono LOneK1K
ENSG00000116221 MRPL37 843896 sc-eQTL 7.14e-01 0.0281 0.0763 0.402 CD14_Mono LOneK1K
ENSG00000157216 SSBP3 614458 sc-eQTL 6.16e-01 0.0402 0.0799 0.402 CD14_Mono LOneK1K
ENSG00000162402 USP24 -187427 sc-eQTL 1.00e-01 -0.0896 0.0543 0.402 CD14_Mono LOneK1K
ENSG00000243725 TTC4 312076 sc-eQTL 1.27e-01 0.138 0.0901 0.402 CD14_Mono LOneK1K
ENSG00000116133 DHCR24 140742 sc-eQTL 4.56e-01 0.0454 0.0609 0.399 CD16_Mono LOneK1K
ENSG00000116205 TCEANC2 974353 sc-eQTL 1.13e-01 0.127 0.0796 0.399 CD16_Mono LOneK1K
ENSG00000116209 TMEM59 974433 sc-eQTL 2.67e-01 0.0661 0.0594 0.399 CD16_Mono LOneK1K
ENSG00000116221 MRPL37 843896 sc-eQTL 4.66e-02 0.162 0.0808 0.399 CD16_Mono LOneK1K
ENSG00000157216 SSBP3 614458 sc-eQTL 4.86e-01 0.0607 0.0869 0.399 CD16_Mono LOneK1K
ENSG00000162402 USP24 -187427 sc-eQTL 6.19e-01 0.0342 0.0686 0.399 CD16_Mono LOneK1K
ENSG00000243725 TTC4 312076 sc-eQTL 8.19e-01 0.0197 0.086 0.399 CD16_Mono LOneK1K
ENSG00000006555 TTC22 226614 sc-eQTL 8.01e-01 -0.0182 0.0721 0.403 NK_CD56dim LOneK1K
ENSG00000116133 DHCR24 140742 sc-eQTL 8.02e-01 0.0189 0.0753 0.403 NK_CD56dim LOneK1K
ENSG00000116205 TCEANC2 974353 sc-eQTL 6.36e-01 0.035 0.0739 0.403 NK_CD56dim LOneK1K
ENSG00000116209 TMEM59 974433 sc-eQTL 6.71e-01 -0.0243 0.0571 0.403 NK_CD56dim LOneK1K
ENSG00000116221 MRPL37 843896 sc-eQTL 6.53e-01 0.0344 0.0765 0.403 NK_CD56dim LOneK1K
ENSG00000157216 SSBP3 614458 sc-eQTL 1.14e-01 0.0992 0.0624 0.403 NK_CD56dim LOneK1K
ENSG00000162398 LEXM 221874 sc-eQTL 9.80e-01 0.0018 0.0708 0.403 NK_CD56dim LOneK1K
ENSG00000162402 USP24 -187427 sc-eQTL 5.13e-01 -0.0294 0.0449 0.403 NK_CD56dim LOneK1K
ENSG00000243725 TTC4 312076 sc-eQTL 2.71e-01 -0.0881 0.0797 0.403 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162402 \N -187427 5.2e-06 5.64e-06 8.1e-07 2.44e-06 1.35e-06 1.54e-06 9.61e-06 9.75e-07 2.81e-06 1.41e-06 5.02e-06 1.79e-06 7.51e-06 2.37e-06 1.33e-06 2e-06 2.76e-06 3.36e-06 1.35e-06 1.39e-06 2.77e-06 4.87e-06 5.84e-06 1.24e-06 6.54e-06 1.74e-06 1.84e-06 1.44e-06 8.25e-06 4.3e-06 2.19e-06 2.49e-07 5.65e-07 1.28e-06 1.71e-06 8.73e-07 1e-06 4.74e-07 1.27e-06 2.13e-07 3.57e-07 4.95e-06 6.27e-07 1.9e-07 2.73e-07 2.93e-07 6.08e-07 8.93e-08 1.82e-07
ENSG00000169174 \N -11611 2.78e-05 3.3e-05 2.98e-06 1.29e-05 2.45e-06 9.53e-06 3.09e-05 2.96e-06 1.97e-05 7.9e-06 2.6e-05 9.35e-06 4.07e-05 9.13e-06 4.98e-06 9.06e-06 1.07e-05 1.52e-05 5.17e-06 4.26e-06 7.77e-06 1.76e-05 2.35e-05 4.74e-06 3.11e-05 5.19e-06 7.6e-06 6.34e-06 2.3e-05 1.81e-05 1.3e-05 9.95e-07 1.33e-06 3.58e-06 7.58e-06 2.9e-06 1.77e-06 2.16e-06 2.68e-06 1.38e-06 1.02e-06 3.32e-05 2.36e-06 1.88e-07 9.34e-07 2.27e-06 1.94e-06 7.25e-07 4.15e-07