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Genes within 1Mb (chr1:55006096:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 204773 sc-eQTL 9.32e-01 0.00716 0.0834 0.342 B L1
ENSG00000116133 DHCR24 118901 sc-eQTL 7.90e-01 -0.021 0.0788 0.342 B L1
ENSG00000116205 TCEANC2 952512 sc-eQTL 7.23e-01 -0.0241 0.068 0.342 B L1
ENSG00000116209 TMEM59 952592 sc-eQTL 8.75e-02 -0.0707 0.0412 0.342 B L1
ENSG00000116221 MRPL37 822055 sc-eQTL 1.07e-01 0.0872 0.0539 0.342 B L1
ENSG00000157216 SSBP3 592617 sc-eQTL 7.84e-01 0.0156 0.0568 0.342 B L1
ENSG00000162402 USP24 -209268 sc-eQTL 8.70e-01 0.00786 0.0481 0.342 B L1
ENSG00000215883 CYB5RL 806060 sc-eQTL 3.81e-01 0.0812 0.0925 0.342 B L1
ENSG00000243725 TTC4 290235 sc-eQTL 6.62e-02 -0.148 0.08 0.342 B L1
ENSG00000006555 TTC22 204773 sc-eQTL 4.69e-01 -0.0467 0.0644 0.342 CD4T L1
ENSG00000116205 TCEANC2 952512 sc-eQTL 9.55e-01 -0.00296 0.0527 0.342 CD4T L1
ENSG00000116209 TMEM59 952592 sc-eQTL 4.14e-01 -0.0401 0.0491 0.342 CD4T L1
ENSG00000116221 MRPL37 822055 sc-eQTL 5.23e-01 0.0435 0.0678 0.342 CD4T L1
ENSG00000157216 SSBP3 592617 sc-eQTL 3.56e-01 0.0521 0.0563 0.342 CD4T L1
ENSG00000162402 USP24 -209268 sc-eQTL 5.52e-01 -0.0274 0.0459 0.342 CD4T L1
ENSG00000243725 TTC4 290235 sc-eQTL 2.79e-02 -0.151 0.0684 0.342 CD4T L1
ENSG00000006555 TTC22 204773 sc-eQTL 3.25e-01 -0.0551 0.0559 0.342 CD8T L1
ENSG00000116205 TCEANC2 952512 sc-eQTL 3.15e-01 -0.0701 0.0697 0.342 CD8T L1
ENSG00000116209 TMEM59 952592 sc-eQTL 5.02e-01 -0.0326 0.0484 0.342 CD8T L1
ENSG00000116221 MRPL37 822055 sc-eQTL 8.52e-01 0.0124 0.0667 0.342 CD8T L1
ENSG00000157216 SSBP3 592617 sc-eQTL 2.39e-01 -0.0564 0.0478 0.342 CD8T L1
ENSG00000162402 USP24 -209268 sc-eQTL 7.49e-01 0.0148 0.0463 0.342 CD8T L1
ENSG00000243725 TTC4 290235 sc-eQTL 5.25e-01 -0.0511 0.0803 0.342 CD8T L1
ENSG00000116133 DHCR24 118901 sc-eQTL 2.08e-01 -0.0935 0.074 0.347 DC L1
ENSG00000116205 TCEANC2 952512 sc-eQTL 6.97e-01 -0.0325 0.0832 0.347 DC L1
ENSG00000116209 TMEM59 952592 sc-eQTL 6.32e-01 -0.0314 0.0654 0.347 DC L1
ENSG00000116221 MRPL37 822055 sc-eQTL 7.21e-02 0.158 0.0872 0.347 DC L1
ENSG00000157216 SSBP3 592617 sc-eQTL 8.16e-02 -0.136 0.0778 0.347 DC L1
ENSG00000162390 ACOT11 463839 sc-eQTL 3.60e-01 0.069 0.0752 0.347 DC L1
ENSG00000162402 USP24 -209268 sc-eQTL 1.21e-01 0.0703 0.0452 0.347 DC L1
ENSG00000215883 CYB5RL 806060 sc-eQTL 7.83e-01 0.0227 0.0822 0.347 DC L1
ENSG00000243725 TTC4 290235 sc-eQTL 3.61e-01 -0.0808 0.0883 0.347 DC L1
ENSG00000116133 DHCR24 118901 sc-eQTL 6.06e-01 0.0281 0.0543 0.342 Mono L1
ENSG00000116205 TCEANC2 952512 sc-eQTL 3.09e-01 0.0597 0.0585 0.342 Mono L1
ENSG00000116209 TMEM59 952592 sc-eQTL 2.54e-01 -0.0497 0.0434 0.342 Mono L1
ENSG00000116221 MRPL37 822055 sc-eQTL 4.99e-02 0.142 0.0722 0.342 Mono L1
ENSG00000157216 SSBP3 592617 sc-eQTL 8.46e-01 0.0162 0.0835 0.342 Mono L1
ENSG00000162402 USP24 -209268 sc-eQTL 3.62e-01 -0.0454 0.0497 0.342 Mono L1
ENSG00000243725 TTC4 290235 sc-eQTL 5.25e-01 -0.0557 0.0875 0.342 Mono L1
ENSG00000006555 TTC22 204773 sc-eQTL 6.60e-01 0.0344 0.078 0.339 NK L1
ENSG00000116133 DHCR24 118901 sc-eQTL 9.12e-01 0.00873 0.0788 0.339 NK L1
ENSG00000116205 TCEANC2 952512 sc-eQTL 8.96e-01 0.0101 0.0777 0.339 NK L1
ENSG00000116209 TMEM59 952592 sc-eQTL 1.24e-01 -0.0935 0.0606 0.339 NK L1
ENSG00000116221 MRPL37 822055 sc-eQTL 8.46e-01 0.0148 0.0757 0.339 NK L1
ENSG00000157216 SSBP3 592617 sc-eQTL 9.03e-01 0.00801 0.0657 0.339 NK L1
ENSG00000162398 LEXM 200033 sc-eQTL 9.41e-01 -0.00546 0.0737 0.339 NK L1
ENSG00000162402 USP24 -209268 sc-eQTL 4.36e-01 -0.0348 0.0446 0.339 NK L1
ENSG00000243725 TTC4 290235 sc-eQTL 9.81e-01 -0.00206 0.0845 0.339 NK L1
ENSG00000006555 TTC22 204773 sc-eQTL 6.94e-01 0.0261 0.0663 0.342 Other_T L1
ENSG00000116133 DHCR24 118901 sc-eQTL 8.49e-01 0.00981 0.0514 0.342 Other_T L1
ENSG00000116205 TCEANC2 952512 sc-eQTL 1.42e-01 0.113 0.0766 0.342 Other_T L1
ENSG00000116209 TMEM59 952592 sc-eQTL 3.83e-01 -0.0461 0.0527 0.342 Other_T L1
ENSG00000116221 MRPL37 822055 sc-eQTL 3.80e-01 0.0434 0.0494 0.342 Other_T L1
ENSG00000157216 SSBP3 592617 sc-eQTL 1.08e-01 -0.0919 0.0569 0.342 Other_T L1
ENSG00000162402 USP24 -209268 sc-eQTL 8.21e-01 -0.0138 0.0609 0.342 Other_T L1
ENSG00000215883 CYB5RL 806060 sc-eQTL 4.05e-01 -0.0694 0.0832 0.342 Other_T L1
ENSG00000243725 TTC4 290235 sc-eQTL 5.61e-01 0.0483 0.0829 0.342 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 204773 sc-eQTL 1.00e+00 -3.82e-06 0.0699 0.352 B_Activated L2
ENSG00000116133 DHCR24 118901 sc-eQTL 2.52e-01 -0.094 0.0818 0.352 B_Activated L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 2.10e-01 -0.11 0.0877 0.352 B_Activated L2
ENSG00000116209 TMEM59 952592 sc-eQTL 7.13e-02 -0.168 0.0928 0.352 B_Activated L2
ENSG00000116221 MRPL37 822055 sc-eQTL 5.61e-01 0.0589 0.101 0.352 B_Activated L2
ENSG00000157216 SSBP3 592617 sc-eQTL 4.07e-01 0.076 0.0914 0.352 B_Activated L2
ENSG00000162402 USP24 -209268 sc-eQTL 9.32e-01 -0.00762 0.0894 0.352 B_Activated L2
ENSG00000215883 CYB5RL 806060 sc-eQTL 1.01e-01 -0.129 0.0783 0.352 B_Activated L2
ENSG00000243725 TTC4 290235 sc-eQTL 9.91e-01 -0.00101 0.0856 0.352 B_Activated L2
ENSG00000006555 TTC22 204773 sc-eQTL 6.22e-01 -0.0437 0.0885 0.343 B_Intermediate L2
ENSG00000116133 DHCR24 118901 sc-eQTL 8.21e-01 0.0186 0.0822 0.343 B_Intermediate L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 1.01e-01 -0.134 0.0813 0.343 B_Intermediate L2
ENSG00000116209 TMEM59 952592 sc-eQTL 8.47e-01 -0.0136 0.0701 0.343 B_Intermediate L2
ENSG00000116221 MRPL37 822055 sc-eQTL 1.99e-03 0.252 0.0806 0.343 B_Intermediate L2
ENSG00000157216 SSBP3 592617 sc-eQTL 1.05e-01 -0.124 0.0765 0.343 B_Intermediate L2
ENSG00000162402 USP24 -209268 sc-eQTL 5.76e-02 -0.123 0.0643 0.343 B_Intermediate L2
ENSG00000215883 CYB5RL 806060 sc-eQTL 8.72e-01 -0.0148 0.0918 0.343 B_Intermediate L2
ENSG00000243725 TTC4 290235 sc-eQTL 9.38e-01 0.00647 0.0835 0.343 B_Intermediate L2
ENSG00000006555 TTC22 204773 sc-eQTL 7.22e-02 -0.153 0.0845 0.345 B_Memory L2
ENSG00000116133 DHCR24 118901 sc-eQTL 3.39e-01 -0.0808 0.0843 0.345 B_Memory L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 9.15e-01 -0.00961 0.0904 0.345 B_Memory L2
ENSG00000116209 TMEM59 952592 sc-eQTL 9.99e-01 5.65e-05 0.0754 0.345 B_Memory L2
ENSG00000116221 MRPL37 822055 sc-eQTL 4.12e-01 -0.0627 0.0762 0.345 B_Memory L2
ENSG00000157216 SSBP3 592617 sc-eQTL 8.74e-02 0.122 0.0708 0.345 B_Memory L2
ENSG00000162402 USP24 -209268 sc-eQTL 4.86e-01 -0.0485 0.0696 0.345 B_Memory L2
ENSG00000215883 CYB5RL 806060 sc-eQTL 2.72e-01 -0.0946 0.0859 0.345 B_Memory L2
ENSG00000243725 TTC4 290235 sc-eQTL 9.29e-01 0.00794 0.0893 0.345 B_Memory L2
ENSG00000006555 TTC22 204773 sc-eQTL 2.38e-01 0.106 0.0892 0.342 B_Naive1 L2
ENSG00000116133 DHCR24 118901 sc-eQTL 3.41e-01 -0.0799 0.0838 0.342 B_Naive1 L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 1.31e-01 0.113 0.0745 0.342 B_Naive1 L2
ENSG00000116209 TMEM59 952592 sc-eQTL 2.58e-01 -0.0615 0.0543 0.342 B_Naive1 L2
ENSG00000116221 MRPL37 822055 sc-eQTL 7.06e-01 0.0303 0.0802 0.342 B_Naive1 L2
ENSG00000157216 SSBP3 592617 sc-eQTL 7.19e-01 -0.0275 0.0764 0.342 B_Naive1 L2
ENSG00000162402 USP24 -209268 sc-eQTL 7.36e-01 -0.0203 0.0602 0.342 B_Naive1 L2
ENSG00000215883 CYB5RL 806060 sc-eQTL 3.13e-01 0.0916 0.0906 0.342 B_Naive1 L2
ENSG00000243725 TTC4 290235 sc-eQTL 1.56e-02 -0.197 0.0809 0.342 B_Naive1 L2
ENSG00000006555 TTC22 204773 sc-eQTL 2.69e-01 -0.0991 0.0894 0.343 B_Naive2 L2
ENSG00000116133 DHCR24 118901 sc-eQTL 6.80e-02 -0.142 0.0775 0.343 B_Naive2 L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 7.17e-01 -0.0314 0.0866 0.343 B_Naive2 L2
ENSG00000116209 TMEM59 952592 sc-eQTL 4.21e-01 -0.0574 0.0712 0.343 B_Naive2 L2
ENSG00000116221 MRPL37 822055 sc-eQTL 9.01e-01 0.0105 0.084 0.343 B_Naive2 L2
ENSG00000157216 SSBP3 592617 sc-eQTL 4.55e-02 0.165 0.0819 0.343 B_Naive2 L2
ENSG00000162402 USP24 -209268 sc-eQTL 2.41e-01 0.0769 0.0653 0.343 B_Naive2 L2
ENSG00000215883 CYB5RL 806060 sc-eQTL 6.72e-01 0.0391 0.0922 0.343 B_Naive2 L2
ENSG00000243725 TTC4 290235 sc-eQTL 7.00e-01 0.037 0.096 0.343 B_Naive2 L2
ENSG00000006555 TTC22 204773 sc-eQTL 2.18e-01 -0.103 0.0837 0.341 CD4_CTL L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 3.78e-01 0.0763 0.0863 0.341 CD4_CTL L2
ENSG00000116209 TMEM59 952592 sc-eQTL 6.56e-02 0.144 0.0779 0.341 CD4_CTL L2
ENSG00000116221 MRPL37 822055 sc-eQTL 7.76e-01 -0.0275 0.0967 0.341 CD4_CTL L2
ENSG00000157216 SSBP3 592617 sc-eQTL 7.91e-01 0.0158 0.0595 0.341 CD4_CTL L2
ENSG00000162402 USP24 -209268 sc-eQTL 6.19e-01 0.0407 0.0816 0.341 CD4_CTL L2
ENSG00000243725 TTC4 290235 sc-eQTL 9.08e-02 0.154 0.0908 0.341 CD4_CTL L2
ENSG00000006555 TTC22 204773 sc-eQTL 5.97e-01 -0.04 0.0755 0.342 CD4_Naive L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 8.47e-01 0.0111 0.0575 0.342 CD4_Naive L2
ENSG00000116209 TMEM59 952592 sc-eQTL 1.27e-01 -0.0853 0.0556 0.342 CD4_Naive L2
ENSG00000116221 MRPL37 822055 sc-eQTL 9.66e-01 0.00307 0.0721 0.342 CD4_Naive L2
ENSG00000157216 SSBP3 592617 sc-eQTL 9.66e-01 0.00245 0.0575 0.342 CD4_Naive L2
ENSG00000162402 USP24 -209268 sc-eQTL 8.96e-01 0.00651 0.0496 0.342 CD4_Naive L2
ENSG00000243725 TTC4 290235 sc-eQTL 4.04e-02 -0.155 0.0749 0.342 CD4_Naive L2
ENSG00000006555 TTC22 204773 sc-eQTL 6.73e-01 0.0339 0.0801 0.342 CD4_TCM L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 9.25e-01 0.00733 0.078 0.342 CD4_TCM L2
ENSG00000116209 TMEM59 952592 sc-eQTL 5.78e-01 -0.0328 0.0588 0.342 CD4_TCM L2
ENSG00000116221 MRPL37 822055 sc-eQTL 2.51e-01 0.0849 0.0738 0.342 CD4_TCM L2
ENSG00000157216 SSBP3 592617 sc-eQTL 3.59e-01 0.0665 0.0724 0.342 CD4_TCM L2
ENSG00000162402 USP24 -209268 sc-eQTL 2.03e-01 -0.0765 0.0599 0.342 CD4_TCM L2
ENSG00000243725 TTC4 290235 sc-eQTL 6.99e-01 -0.0335 0.0866 0.342 CD4_TCM L2
ENSG00000006555 TTC22 204773 sc-eQTL 2.53e-01 0.106 0.0922 0.342 CD4_TEM L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 8.74e-01 0.0139 0.0877 0.342 CD4_TEM L2
ENSG00000116209 TMEM59 952592 sc-eQTL 6.89e-01 0.0272 0.0679 0.342 CD4_TEM L2
ENSG00000116221 MRPL37 822055 sc-eQTL 5.72e-02 -0.166 0.0867 0.342 CD4_TEM L2
ENSG00000157216 SSBP3 592617 sc-eQTL 7.71e-01 0.0218 0.0749 0.342 CD4_TEM L2
ENSG00000162402 USP24 -209268 sc-eQTL 2.10e-01 -0.0855 0.0679 0.342 CD4_TEM L2
ENSG00000243725 TTC4 290235 sc-eQTL 4.18e-01 -0.0731 0.09 0.342 CD4_TEM L2
ENSG00000006555 TTC22 204773 sc-eQTL 9.59e-02 -0.123 0.0734 0.342 CD8_CTL L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 3.40e-01 0.078 0.0816 0.342 CD8_CTL L2
ENSG00000116209 TMEM59 952592 sc-eQTL 5.52e-01 -0.0423 0.0711 0.342 CD8_CTL L2
ENSG00000116221 MRPL37 822055 sc-eQTL 6.89e-01 -0.0337 0.0842 0.342 CD8_CTL L2
ENSG00000157216 SSBP3 592617 sc-eQTL 3.94e-01 -0.0491 0.0575 0.342 CD8_CTL L2
ENSG00000162402 USP24 -209268 sc-eQTL 6.51e-01 -0.0259 0.0572 0.342 CD8_CTL L2
ENSG00000243725 TTC4 290235 sc-eQTL 7.42e-01 -0.0283 0.0857 0.342 CD8_CTL L2
ENSG00000006555 TTC22 204773 sc-eQTL 5.54e-01 -0.0491 0.0829 0.342 CD8_Naive L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 6.57e-02 -0.138 0.0745 0.342 CD8_Naive L2
ENSG00000116209 TMEM59 952592 sc-eQTL 6.91e-01 -0.0293 0.0734 0.342 CD8_Naive L2
ENSG00000116221 MRPL37 822055 sc-eQTL 3.80e-01 0.0775 0.088 0.342 CD8_Naive L2
ENSG00000157216 SSBP3 592617 sc-eQTL 8.25e-02 -0.116 0.0662 0.342 CD8_Naive L2
ENSG00000162402 USP24 -209268 sc-eQTL 9.08e-01 0.00699 0.0606 0.342 CD8_Naive L2
ENSG00000243725 TTC4 290235 sc-eQTL 4.65e-01 0.0649 0.0886 0.342 CD8_Naive L2
ENSG00000006555 TTC22 204773 sc-eQTL 7.68e-01 -0.0267 0.0904 0.34 CD8_TCM L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 4.22e-01 0.073 0.0908 0.34 CD8_TCM L2
ENSG00000116209 TMEM59 952592 sc-eQTL 5.48e-01 0.0482 0.08 0.34 CD8_TCM L2
ENSG00000116221 MRPL37 822055 sc-eQTL 4.31e-01 0.0715 0.0906 0.34 CD8_TCM L2
ENSG00000157216 SSBP3 592617 sc-eQTL 2.00e-01 -0.101 0.0784 0.34 CD8_TCM L2
ENSG00000162402 USP24 -209268 sc-eQTL 2.58e-01 0.0863 0.0761 0.34 CD8_TCM L2
ENSG00000243725 TTC4 290235 sc-eQTL 3.42e-01 -0.0883 0.0926 0.34 CD8_TCM L2
ENSG00000006555 TTC22 204773 sc-eQTL 7.88e-01 -0.0236 0.0877 0.333 CD8_TEM L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 1.19e-01 -0.142 0.0909 0.333 CD8_TEM L2
ENSG00000116209 TMEM59 952592 sc-eQTL 4.39e-01 -0.0685 0.0884 0.333 CD8_TEM L2
ENSG00000116221 MRPL37 822055 sc-eQTL 7.24e-01 -0.0317 0.0897 0.333 CD8_TEM L2
ENSG00000157216 SSBP3 592617 sc-eQTL 2.60e-01 -0.0956 0.0846 0.333 CD8_TEM L2
ENSG00000162402 USP24 -209268 sc-eQTL 2.97e-01 -0.0933 0.0892 0.333 CD8_TEM L2
ENSG00000243725 TTC4 290235 sc-eQTL 4.45e-01 0.0694 0.0907 0.333 CD8_TEM L2
ENSG00000006555 TTC22 204773 sc-eQTL 5.69e-01 -0.0453 0.0795 0.344 MAIT L2
ENSG00000116133 DHCR24 118901 sc-eQTL 7.85e-01 0.0161 0.0589 0.344 MAIT L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 1.92e-01 0.108 0.0825 0.344 MAIT L2
ENSG00000116209 TMEM59 952592 sc-eQTL 6.75e-01 -0.0314 0.0748 0.344 MAIT L2
ENSG00000116221 MRPL37 822055 sc-eQTL 3.46e-01 -0.0858 0.0908 0.344 MAIT L2
ENSG00000157216 SSBP3 592617 sc-eQTL 1.16e-01 -0.127 0.0801 0.344 MAIT L2
ENSG00000162402 USP24 -209268 sc-eQTL 6.67e-01 0.0308 0.0716 0.344 MAIT L2
ENSG00000215883 CYB5RL 806060 sc-eQTL 6.89e-02 -0.151 0.0826 0.344 MAIT L2
ENSG00000243725 TTC4 290235 sc-eQTL 7.26e-01 0.029 0.0827 0.344 MAIT L2
ENSG00000006555 TTC22 204773 sc-eQTL 6.90e-01 -0.0364 0.091 0.34 NK_CD56bright L2
ENSG00000116133 DHCR24 118901 sc-eQTL 2.53e-01 0.0919 0.0801 0.34 NK_CD56bright L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 5.67e-01 0.0487 0.0849 0.34 NK_CD56bright L2
ENSG00000116209 TMEM59 952592 sc-eQTL 5.58e-01 0.0486 0.0828 0.34 NK_CD56bright L2
ENSG00000116221 MRPL37 822055 sc-eQTL 7.15e-01 -0.0338 0.0925 0.34 NK_CD56bright L2
ENSG00000157216 SSBP3 592617 sc-eQTL 2.29e-01 -0.0839 0.0695 0.34 NK_CD56bright L2
ENSG00000162398 LEXM 200033 sc-eQTL 8.98e-01 -0.0105 0.0824 0.34 NK_CD56bright L2
ENSG00000162402 USP24 -209268 sc-eQTL 1.13e-01 0.112 0.0705 0.34 NK_CD56bright L2
ENSG00000243725 TTC4 290235 sc-eQTL 7.60e-01 -0.0273 0.0894 0.34 NK_CD56bright L2
ENSG00000006555 TTC22 204773 sc-eQTL 9.49e-01 0.005 0.0778 0.338 NK_CD56dim L2
ENSG00000116133 DHCR24 118901 sc-eQTL 8.34e-01 0.017 0.0811 0.338 NK_CD56dim L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 4.40e-01 0.0678 0.0877 0.338 NK_CD56dim L2
ENSG00000116209 TMEM59 952592 sc-eQTL 4.51e-01 -0.0491 0.065 0.338 NK_CD56dim L2
ENSG00000116221 MRPL37 822055 sc-eQTL 4.43e-01 0.065 0.0846 0.338 NK_CD56dim L2
ENSG00000157216 SSBP3 592617 sc-eQTL 9.76e-01 -0.00205 0.0694 0.338 NK_CD56dim L2
ENSG00000162398 LEXM 200033 sc-eQTL 5.04e-01 0.0533 0.0797 0.338 NK_CD56dim L2
ENSG00000162402 USP24 -209268 sc-eQTL 5.11e-01 -0.0334 0.0506 0.338 NK_CD56dim L2
ENSG00000243725 TTC4 290235 sc-eQTL 8.84e-01 0.0127 0.0868 0.338 NK_CD56dim L2
ENSG00000006555 TTC22 204773 sc-eQTL 7.17e-01 -0.0333 0.0919 0.347 NK_HLA L2
ENSG00000116133 DHCR24 118901 sc-eQTL 3.25e-01 0.0883 0.0894 0.347 NK_HLA L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 4.02e-01 -0.0725 0.0863 0.347 NK_HLA L2
ENSG00000116209 TMEM59 952592 sc-eQTL 2.22e-01 -0.105 0.0856 0.347 NK_HLA L2
ENSG00000116221 MRPL37 822055 sc-eQTL 9.68e-01 -0.0038 0.0947 0.347 NK_HLA L2
ENSG00000157216 SSBP3 592617 sc-eQTL 7.32e-01 0.0265 0.0772 0.347 NK_HLA L2
ENSG00000162398 LEXM 200033 sc-eQTL 2.83e-01 0.0936 0.0869 0.347 NK_HLA L2
ENSG00000162402 USP24 -209268 sc-eQTL 9.74e-02 -0.106 0.0635 0.347 NK_HLA L2
ENSG00000243725 TTC4 290235 sc-eQTL 8.25e-01 0.0211 0.0955 0.347 NK_HLA L2
ENSG00000006555 TTC22 204773 sc-eQTL 5.45e-01 0.0505 0.0833 0.338 NK_cytokine L2
ENSG00000116133 DHCR24 118901 sc-eQTL 7.48e-01 -0.0271 0.0842 0.338 NK_cytokine L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 4.62e-01 -0.0616 0.0836 0.338 NK_cytokine L2
ENSG00000116209 TMEM59 952592 sc-eQTL 5.30e-02 -0.131 0.0674 0.338 NK_cytokine L2
ENSG00000116221 MRPL37 822055 sc-eQTL 3.64e-01 0.076 0.0836 0.338 NK_cytokine L2
ENSG00000157216 SSBP3 592617 sc-eQTL 6.57e-01 -0.0313 0.0703 0.338 NK_cytokine L2
ENSG00000162398 LEXM 200033 sc-eQTL 4.52e-01 -0.0662 0.0878 0.338 NK_cytokine L2
ENSG00000162402 USP24 -209268 sc-eQTL 5.75e-01 -0.0336 0.0598 0.338 NK_cytokine L2
ENSG00000243725 TTC4 290235 sc-eQTL 7.57e-01 -0.0275 0.0888 0.338 NK_cytokine L2
ENSG00000006555 TTC22 204773 sc-eQTL 6.38e-01 -0.0497 0.105 0.344 PB L2
ENSG00000116133 DHCR24 118901 sc-eQTL 6.88e-01 0.0376 0.0934 0.344 PB L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 1.04e-01 0.184 0.112 0.344 PB L2
ENSG00000116209 TMEM59 952592 sc-eQTL 6.14e-03 -0.128 0.046 0.344 PB L2
ENSG00000116221 MRPL37 822055 sc-eQTL 9.06e-01 -0.0103 0.0864 0.344 PB L2
ENSG00000157216 SSBP3 592617 sc-eQTL 7.09e-01 -0.0374 0.0998 0.344 PB L2
ENSG00000162402 USP24 -209268 sc-eQTL 7.32e-01 -0.0388 0.113 0.344 PB L2
ENSG00000215883 CYB5RL 806060 sc-eQTL 4.37e-01 -0.0913 0.117 0.344 PB L2
ENSG00000243725 TTC4 290235 sc-eQTL 4.96e-02 -0.214 0.108 0.344 PB L2
ENSG00000006555 TTC22 204773 sc-eQTL 5.22e-02 0.156 0.08 0.341 Pro_T L2
ENSG00000116133 DHCR24 118901 sc-eQTL 6.18e-01 0.0342 0.0686 0.341 Pro_T L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 3.57e-01 0.0772 0.0836 0.341 Pro_T L2
ENSG00000116209 TMEM59 952592 sc-eQTL 2.43e-01 -0.0678 0.0579 0.341 Pro_T L2
ENSG00000116221 MRPL37 822055 sc-eQTL 8.24e-01 -0.0127 0.0569 0.341 Pro_T L2
ENSG00000157216 SSBP3 592617 sc-eQTL 1.18e-01 -0.0995 0.0635 0.341 Pro_T L2
ENSG00000162402 USP24 -209268 sc-eQTL 9.24e-01 -0.00746 0.0778 0.341 Pro_T L2
ENSG00000215883 CYB5RL 806060 sc-eQTL 8.80e-01 -0.0116 0.0768 0.341 Pro_T L2
ENSG00000243725 TTC4 290235 sc-eQTL 5.64e-01 -0.0493 0.0854 0.341 Pro_T L2
ENSG00000006555 TTC22 204773 sc-eQTL 3.06e-02 -0.174 0.0801 0.342 Treg L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 8.97e-01 -0.0112 0.0867 0.342 Treg L2
ENSG00000116209 TMEM59 952592 sc-eQTL 6.87e-01 0.0277 0.0685 0.342 Treg L2
ENSG00000116221 MRPL37 822055 sc-eQTL 2.23e-01 0.103 0.0845 0.342 Treg L2
ENSG00000157216 SSBP3 592617 sc-eQTL 3.92e-01 -0.0648 0.0756 0.342 Treg L2
ENSG00000162402 USP24 -209268 sc-eQTL 5.08e-01 -0.0478 0.072 0.342 Treg L2
ENSG00000243725 TTC4 290235 sc-eQTL 7.40e-01 -0.0302 0.0908 0.342 Treg L2
ENSG00000116133 DHCR24 118901 sc-eQTL 5.82e-02 -0.138 0.0722 0.351 cDC L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 1.64e-01 -0.12 0.0855 0.351 cDC L2
ENSG00000116209 TMEM59 952592 sc-eQTL 9.47e-01 0.00486 0.0731 0.351 cDC L2
ENSG00000116221 MRPL37 822055 sc-eQTL 2.69e-01 0.103 0.0932 0.351 cDC L2
ENSG00000157216 SSBP3 592617 sc-eQTL 3.61e-01 -0.0788 0.086 0.351 cDC L2
ENSG00000162390 ACOT11 463839 sc-eQTL 3.67e-01 0.0723 0.0799 0.351 cDC L2
ENSG00000162402 USP24 -209268 sc-eQTL 7.69e-01 -0.0264 0.0898 0.351 cDC L2
ENSG00000215883 CYB5RL 806060 sc-eQTL 7.48e-01 0.0249 0.0772 0.351 cDC L2
ENSG00000243725 TTC4 290235 sc-eQTL 5.05e-01 -0.0615 0.0921 0.351 cDC L2
ENSG00000116133 DHCR24 118901 sc-eQTL 4.87e-01 -0.0369 0.053 0.342 cMono_IL1B L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 8.97e-01 -0.00952 0.0737 0.342 cMono_IL1B L2
ENSG00000116209 TMEM59 952592 sc-eQTL 7.53e-01 -0.0141 0.0447 0.342 cMono_IL1B L2
ENSG00000116221 MRPL37 822055 sc-eQTL 4.44e-01 0.061 0.0795 0.342 cMono_IL1B L2
ENSG00000157216 SSBP3 592617 sc-eQTL 2.38e-01 -0.0959 0.081 0.342 cMono_IL1B L2
ENSG00000162402 USP24 -209268 sc-eQTL 6.58e-01 0.0266 0.06 0.342 cMono_IL1B L2
ENSG00000243725 TTC4 290235 sc-eQTL 7.48e-01 -0.0295 0.0918 0.342 cMono_IL1B L2
ENSG00000116133 DHCR24 118901 sc-eQTL 9.42e-01 -0.00363 0.0496 0.342 cMono_S100A L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 7.55e-01 0.0236 0.0757 0.342 cMono_S100A L2
ENSG00000116209 TMEM59 952592 sc-eQTL 9.53e-01 0.00357 0.0606 0.342 cMono_S100A L2
ENSG00000116221 MRPL37 822055 sc-eQTL 3.94e-02 0.18 0.0867 0.342 cMono_S100A L2
ENSG00000157216 SSBP3 592617 sc-eQTL 4.10e-01 0.0749 0.0907 0.342 cMono_S100A L2
ENSG00000162402 USP24 -209268 sc-eQTL 5.64e-01 -0.0425 0.0735 0.342 cMono_S100A L2
ENSG00000243725 TTC4 290235 sc-eQTL 5.08e-01 -0.061 0.092 0.342 cMono_S100A L2
ENSG00000006555 TTC22 204773 sc-eQTL 6.25e-01 -0.042 0.0858 0.348 gdT L2
ENSG00000116133 DHCR24 118901 sc-eQTL 5.67e-01 -0.0549 0.0956 0.348 gdT L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 1.64e-01 0.134 0.0955 0.348 gdT L2
ENSG00000116209 TMEM59 952592 sc-eQTL 6.17e-01 -0.0489 0.0974 0.348 gdT L2
ENSG00000116221 MRPL37 822055 sc-eQTL 9.90e-01 -0.00134 0.112 0.348 gdT L2
ENSG00000157216 SSBP3 592617 sc-eQTL 4.84e-01 -0.048 0.0683 0.348 gdT L2
ENSG00000162402 USP24 -209268 sc-eQTL 2.86e-01 -0.0981 0.0916 0.348 gdT L2
ENSG00000215883 CYB5RL 806060 sc-eQTL 5.89e-01 0.0517 0.0955 0.348 gdT L2
ENSG00000243725 TTC4 290235 sc-eQTL 3.71e-01 0.0965 0.107 0.348 gdT L2
ENSG00000116133 DHCR24 118901 sc-eQTL 4.65e-01 0.0488 0.0666 0.34 intMono L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 4.03e-02 0.17 0.0822 0.34 intMono L2
ENSG00000116209 TMEM59 952592 sc-eQTL 5.21e-01 0.0392 0.061 0.34 intMono L2
ENSG00000116221 MRPL37 822055 sc-eQTL 2.48e-01 0.108 0.093 0.34 intMono L2
ENSG00000157216 SSBP3 592617 sc-eQTL 3.46e-01 0.0898 0.0951 0.34 intMono L2
ENSG00000162402 USP24 -209268 sc-eQTL 9.28e-01 0.00768 0.085 0.34 intMono L2
ENSG00000243725 TTC4 290235 sc-eQTL 9.19e-01 -0.00916 0.0905 0.34 intMono L2
ENSG00000116133 DHCR24 118901 sc-eQTL 6.97e-01 -0.0257 0.0658 0.342 ncMono L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 6.83e-01 0.0336 0.0822 0.342 ncMono L2
ENSG00000116209 TMEM59 952592 sc-eQTL 4.96e-02 -0.129 0.0652 0.342 ncMono L2
ENSG00000116221 MRPL37 822055 sc-eQTL 6.02e-01 0.0443 0.0849 0.342 ncMono L2
ENSG00000157216 SSBP3 592617 sc-eQTL 4.63e-01 -0.0682 0.0927 0.342 ncMono L2
ENSG00000162402 USP24 -209268 sc-eQTL 4.19e-01 -0.06 0.0741 0.342 ncMono L2
ENSG00000243725 TTC4 290235 sc-eQTL 8.82e-01 -0.013 0.0878 0.342 ncMono L2
ENSG00000116133 DHCR24 118901 sc-eQTL 3.54e-01 -0.0737 0.0794 0.359 pDC L2
ENSG00000116205 TCEANC2 952512 sc-eQTL 5.23e-01 -0.061 0.0953 0.359 pDC L2
ENSG00000116209 TMEM59 952592 sc-eQTL 1.17e-01 0.119 0.0756 0.359 pDC L2
ENSG00000116221 MRPL37 822055 sc-eQTL 4.82e-02 0.199 0.1 0.359 pDC L2
ENSG00000157216 SSBP3 592617 sc-eQTL 1.06e-01 -0.145 0.0892 0.359 pDC L2
ENSG00000162390 ACOT11 463839 sc-eQTL 8.28e-01 0.00824 0.0378 0.359 pDC L2
ENSG00000162402 USP24 -209268 sc-eQTL 2.71e-01 0.0703 0.0636 0.359 pDC L2
ENSG00000215883 CYB5RL 806060 sc-eQTL 7.01e-01 -0.0335 0.0872 0.359 pDC L2
ENSG00000243725 TTC4 290235 sc-eQTL 2.99e-01 -0.105 0.1 0.359 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 204773 sc-eQTL 5.51e-01 -0.0509 0.0852 0.342 B_Memory LOneK1K
ENSG00000116133 DHCR24 118901 sc-eQTL 8.64e-01 -0.0147 0.0856 0.342 B_Memory LOneK1K
ENSG00000116205 TCEANC2 952512 sc-eQTL 1.72e-01 -0.113 0.0824 0.342 B_Memory LOneK1K
ENSG00000116209 TMEM59 952592 sc-eQTL 2.79e-01 -0.0697 0.0642 0.342 B_Memory LOneK1K
ENSG00000116221 MRPL37 822055 sc-eQTL 1.68e-02 0.183 0.076 0.342 B_Memory LOneK1K
ENSG00000157216 SSBP3 592617 sc-eQTL 9.59e-01 -0.00346 0.067 0.342 B_Memory LOneK1K
ENSG00000162402 USP24 -209268 sc-eQTL 1.91e-01 -0.0799 0.0609 0.342 B_Memory LOneK1K
ENSG00000215883 CYB5RL 806060 sc-eQTL 4.83e-01 -0.0659 0.0938 0.342 B_Memory LOneK1K
ENSG00000243725 TTC4 290235 sc-eQTL 8.59e-01 0.015 0.0844 0.342 B_Memory LOneK1K
ENSG00000006555 TTC22 204773 sc-eQTL 8.58e-01 0.0162 0.0904 0.342 B_Naive LOneK1K
ENSG00000116133 DHCR24 118901 sc-eQTL 7.36e-02 -0.145 0.0808 0.342 B_Naive LOneK1K
ENSG00000116205 TCEANC2 952512 sc-eQTL 4.91e-01 0.0507 0.0735 0.342 B_Naive LOneK1K
ENSG00000116209 TMEM59 952592 sc-eQTL 2.77e-01 -0.0568 0.0521 0.342 B_Naive LOneK1K
ENSG00000116221 MRPL37 822055 sc-eQTL 6.86e-01 0.0304 0.0751 0.342 B_Naive LOneK1K
ENSG00000157216 SSBP3 592617 sc-eQTL 7.38e-01 0.0225 0.0672 0.342 B_Naive LOneK1K
ENSG00000162402 USP24 -209268 sc-eQTL 6.68e-01 0.0248 0.0576 0.342 B_Naive LOneK1K
ENSG00000215883 CYB5RL 806060 sc-eQTL 3.03e-01 0.0941 0.0911 0.342 B_Naive LOneK1K
ENSG00000243725 TTC4 290235 sc-eQTL 3.71e-02 -0.178 0.085 0.342 B_Naive LOneK1K
ENSG00000116133 DHCR24 118901 sc-eQTL 3.71e-01 -0.0461 0.0514 0.342 CD14_Mono LOneK1K
ENSG00000116205 TCEANC2 952512 sc-eQTL 8.68e-01 -0.0107 0.0645 0.342 CD14_Mono LOneK1K
ENSG00000116209 TMEM59 952592 sc-eQTL 7.00e-01 -0.0172 0.0445 0.342 CD14_Mono LOneK1K
ENSG00000116221 MRPL37 822055 sc-eQTL 3.99e-02 0.161 0.078 0.342 CD14_Mono LOneK1K
ENSG00000157216 SSBP3 592617 sc-eQTL 7.49e-01 -0.0264 0.0824 0.342 CD14_Mono LOneK1K
ENSG00000162402 USP24 -209268 sc-eQTL 7.64e-01 -0.0169 0.0563 0.342 CD14_Mono LOneK1K
ENSG00000243725 TTC4 290235 sc-eQTL 5.58e-01 -0.0547 0.0933 0.342 CD14_Mono LOneK1K
ENSG00000116133 DHCR24 118901 sc-eQTL 4.77e-01 0.0444 0.0623 0.338 CD16_Mono LOneK1K
ENSG00000116205 TCEANC2 952512 sc-eQTL 7.92e-02 0.143 0.0814 0.338 CD16_Mono LOneK1K
ENSG00000116209 TMEM59 952592 sc-eQTL 5.33e-01 -0.038 0.0609 0.338 CD16_Mono LOneK1K
ENSG00000116221 MRPL37 822055 sc-eQTL 3.43e-01 0.0792 0.0833 0.338 CD16_Mono LOneK1K
ENSG00000157216 SSBP3 592617 sc-eQTL 7.00e-01 0.0343 0.089 0.338 CD16_Mono LOneK1K
ENSG00000162402 USP24 -209268 sc-eQTL 3.07e-01 -0.0717 0.07 0.338 CD16_Mono LOneK1K
ENSG00000243725 TTC4 290235 sc-eQTL 9.53e-01 -0.00517 0.088 0.338 CD16_Mono LOneK1K
ENSG00000006555 TTC22 204773 sc-eQTL 7.15e-01 0.0278 0.0761 0.338 NK_CD56dim LOneK1K
ENSG00000116133 DHCR24 118901 sc-eQTL 8.44e-01 -0.0157 0.0795 0.338 NK_CD56dim LOneK1K
ENSG00000116205 TCEANC2 952512 sc-eQTL 9.95e-01 -0.000442 0.0779 0.338 NK_CD56dim LOneK1K
ENSG00000116209 TMEM59 952592 sc-eQTL 8.36e-02 -0.104 0.0599 0.338 NK_CD56dim LOneK1K
ENSG00000116221 MRPL37 822055 sc-eQTL 5.19e-01 0.0522 0.0807 0.338 NK_CD56dim LOneK1K
ENSG00000157216 SSBP3 592617 sc-eQTL 8.83e-01 -0.0098 0.0663 0.338 NK_CD56dim LOneK1K
ENSG00000162398 LEXM 200033 sc-eQTL 9.33e-01 0.00633 0.0747 0.338 NK_CD56dim LOneK1K
ENSG00000162402 USP24 -209268 sc-eQTL 2.25e-01 -0.0574 0.0472 0.338 NK_CD56dim LOneK1K
ENSG00000243725 TTC4 290235 sc-eQTL 6.26e-01 0.0411 0.0843 0.338 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116133 DHCR24 118901 eQTL 0.0227 0.059 0.0258 0.0 0.0 0.383

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina