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Genes within 1Mb (chr1:54996707:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 195384 sc-eQTL 6.85e-01 0.0338 0.0834 0.331 B L1
ENSG00000116133 DHCR24 109512 sc-eQTL 7.18e-01 -0.0285 0.0789 0.331 B L1
ENSG00000116205 TCEANC2 943123 sc-eQTL 5.53e-01 -0.0405 0.068 0.331 B L1
ENSG00000116209 TMEM59 943203 sc-eQTL 4.54e-02 -0.0827 0.0411 0.331 B L1
ENSG00000116221 MRPL37 812666 sc-eQTL 2.79e-01 0.0588 0.0541 0.331 B L1
ENSG00000157216 SSBP3 583228 sc-eQTL 1.16e-01 0.0892 0.0565 0.331 B L1
ENSG00000162402 USP24 -218657 sc-eQTL 2.24e-01 0.0586 0.048 0.331 B L1
ENSG00000215883 CYB5RL 796671 sc-eQTL 7.06e-01 0.035 0.0927 0.331 B L1
ENSG00000243725 TTC4 280846 sc-eQTL 4.92e-01 0.0554 0.0806 0.331 B L1
ENSG00000006555 TTC22 195384 sc-eQTL 3.41e-01 -0.061 0.0639 0.331 CD4T L1
ENSG00000116205 TCEANC2 943123 sc-eQTL 1.95e-01 -0.0679 0.0522 0.331 CD4T L1
ENSG00000116209 TMEM59 943203 sc-eQTL 8.71e-01 0.00792 0.0488 0.331 CD4T L1
ENSG00000116221 MRPL37 812666 sc-eQTL 8.23e-01 -0.0151 0.0674 0.331 CD4T L1
ENSG00000157216 SSBP3 583228 sc-eQTL 1.39e-01 -0.0829 0.0557 0.331 CD4T L1
ENSG00000162402 USP24 -218657 sc-eQTL 2.46e-01 0.0529 0.0455 0.331 CD4T L1
ENSG00000243725 TTC4 280846 sc-eQTL 1.35e-02 0.169 0.0677 0.331 CD4T L1
ENSG00000006555 TTC22 195384 sc-eQTL 7.40e-01 0.0185 0.0557 0.331 CD8T L1
ENSG00000116205 TCEANC2 943123 sc-eQTL 1.10e-01 -0.111 0.069 0.331 CD8T L1
ENSG00000116209 TMEM59 943203 sc-eQTL 7.63e-01 -0.0146 0.0482 0.331 CD8T L1
ENSG00000116221 MRPL37 812666 sc-eQTL 3.99e-01 -0.056 0.0663 0.331 CD8T L1
ENSG00000157216 SSBP3 583228 sc-eQTL 4.35e-01 -0.0373 0.0476 0.331 CD8T L1
ENSG00000162402 USP24 -218657 sc-eQTL 4.80e-02 0.0909 0.0457 0.331 CD8T L1
ENSG00000243725 TTC4 280846 sc-eQTL 6.03e-01 0.0416 0.0799 0.331 CD8T L1
ENSG00000116133 DHCR24 109512 sc-eQTL 8.21e-01 0.0173 0.0763 0.327 DC L1
ENSG00000116205 TCEANC2 943123 sc-eQTL 4.56e-01 0.0638 0.0854 0.327 DC L1
ENSG00000116209 TMEM59 943203 sc-eQTL 3.27e-01 0.0659 0.0671 0.327 DC L1
ENSG00000116221 MRPL37 812666 sc-eQTL 7.61e-01 -0.0275 0.0903 0.327 DC L1
ENSG00000157216 SSBP3 583228 sc-eQTL 4.46e-01 -0.0615 0.0804 0.327 DC L1
ENSG00000162390 ACOT11 454450 sc-eQTL 7.01e-01 -0.0297 0.0774 0.327 DC L1
ENSG00000162402 USP24 -218657 sc-eQTL 3.17e-02 -0.0999 0.0462 0.327 DC L1
ENSG00000215883 CYB5RL 796671 sc-eQTL 2.01e-01 0.108 0.0841 0.327 DC L1
ENSG00000243725 TTC4 280846 sc-eQTL 5.52e-01 0.0541 0.0908 0.327 DC L1
ENSG00000116133 DHCR24 109512 sc-eQTL 2.99e-01 -0.0563 0.0541 0.331 Mono L1
ENSG00000116205 TCEANC2 943123 sc-eQTL 4.88e-02 0.115 0.058 0.331 Mono L1
ENSG00000116209 TMEM59 943203 sc-eQTL 7.99e-01 0.0111 0.0435 0.331 Mono L1
ENSG00000116221 MRPL37 812666 sc-eQTL 1.76e-01 0.0983 0.0724 0.331 Mono L1
ENSG00000157216 SSBP3 583228 sc-eQTL 5.52e-02 -0.159 0.0826 0.331 Mono L1
ENSG00000162402 USP24 -218657 sc-eQTL 8.96e-02 0.0841 0.0493 0.331 Mono L1
ENSG00000243725 TTC4 280846 sc-eQTL 6.15e-01 -0.0441 0.0874 0.331 Mono L1
ENSG00000006555 TTC22 195384 sc-eQTL 4.62e-01 0.0545 0.074 0.328 NK L1
ENSG00000116133 DHCR24 109512 sc-eQTL 9.51e-01 0.00459 0.0748 0.328 NK L1
ENSG00000116205 TCEANC2 943123 sc-eQTL 2.75e-01 0.0805 0.0736 0.328 NK L1
ENSG00000116209 TMEM59 943203 sc-eQTL 6.55e-01 0.0258 0.0578 0.328 NK L1
ENSG00000116221 MRPL37 812666 sc-eQTL 5.36e-01 0.0445 0.0718 0.328 NK L1
ENSG00000157216 SSBP3 583228 sc-eQTL 3.77e-01 -0.055 0.0622 0.328 NK L1
ENSG00000162398 LEXM 190644 sc-eQTL 4.73e-02 -0.138 0.0692 0.328 NK L1
ENSG00000162402 USP24 -218657 sc-eQTL 1.47e-01 0.0614 0.0422 0.328 NK L1
ENSG00000243725 TTC4 280846 sc-eQTL 7.25e-01 0.0282 0.0801 0.328 NK L1
ENSG00000006555 TTC22 195384 sc-eQTL 4.97e-01 -0.0457 0.0671 0.331 Other_T L1
ENSG00000116133 DHCR24 109512 sc-eQTL 5.22e-01 0.0334 0.0521 0.331 Other_T L1
ENSG00000116205 TCEANC2 943123 sc-eQTL 9.52e-01 -0.00474 0.078 0.331 Other_T L1
ENSG00000116209 TMEM59 943203 sc-eQTL 6.96e-01 0.021 0.0535 0.331 Other_T L1
ENSG00000116221 MRPL37 812666 sc-eQTL 9.46e-01 -0.00339 0.0501 0.331 Other_T L1
ENSG00000157216 SSBP3 583228 sc-eQTL 5.75e-01 -0.0325 0.058 0.331 Other_T L1
ENSG00000162402 USP24 -218657 sc-eQTL 6.28e-01 0.0299 0.0617 0.331 Other_T L1
ENSG00000215883 CYB5RL 796671 sc-eQTL 4.07e-01 0.07 0.0843 0.331 Other_T L1
ENSG00000243725 TTC4 280846 sc-eQTL 3.89e-01 0.0725 0.0839 0.331 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 195384 sc-eQTL 8.00e-01 -0.0182 0.0716 0.327 B_Activated L2
ENSG00000116133 DHCR24 109512 sc-eQTL 1.98e-01 0.108 0.0837 0.327 B_Activated L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 2.25e-01 -0.11 0.0899 0.327 B_Activated L2
ENSG00000116209 TMEM59 943203 sc-eQTL 6.10e-01 0.049 0.0958 0.327 B_Activated L2
ENSG00000116221 MRPL37 812666 sc-eQTL 7.65e-01 -0.0309 0.104 0.327 B_Activated L2
ENSG00000157216 SSBP3 583228 sc-eQTL 2.30e-01 0.112 0.0934 0.327 B_Activated L2
ENSG00000162402 USP24 -218657 sc-eQTL 9.35e-01 0.00744 0.0915 0.327 B_Activated L2
ENSG00000215883 CYB5RL 796671 sc-eQTL 8.17e-01 -0.0187 0.0808 0.327 B_Activated L2
ENSG00000243725 TTC4 280846 sc-eQTL 8.47e-01 0.0169 0.0876 0.327 B_Activated L2
ENSG00000006555 TTC22 195384 sc-eQTL 3.00e-01 -0.0923 0.0888 0.33 B_Intermediate L2
ENSG00000116133 DHCR24 109512 sc-eQTL 4.75e-01 0.059 0.0825 0.33 B_Intermediate L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 7.49e-01 0.0264 0.0823 0.33 B_Intermediate L2
ENSG00000116209 TMEM59 943203 sc-eQTL 3.55e-01 -0.0651 0.0703 0.33 B_Intermediate L2
ENSG00000116221 MRPL37 812666 sc-eQTL 9.78e-01 0.00232 0.0829 0.33 B_Intermediate L2
ENSG00000157216 SSBP3 583228 sc-eQTL 2.72e-01 0.085 0.0772 0.33 B_Intermediate L2
ENSG00000162402 USP24 -218657 sc-eQTL 6.37e-02 0.121 0.0647 0.33 B_Intermediate L2
ENSG00000215883 CYB5RL 796671 sc-eQTL 5.03e-01 0.0618 0.0922 0.33 B_Intermediate L2
ENSG00000243725 TTC4 280846 sc-eQTL 7.13e-01 0.0309 0.0839 0.33 B_Intermediate L2
ENSG00000006555 TTC22 195384 sc-eQTL 3.25e-01 0.0837 0.0849 0.33 B_Memory L2
ENSG00000116133 DHCR24 109512 sc-eQTL 9.96e-01 -0.000394 0.0844 0.33 B_Memory L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 9.85e-01 0.0017 0.0903 0.33 B_Memory L2
ENSG00000116209 TMEM59 943203 sc-eQTL 2.61e-01 -0.0846 0.0751 0.33 B_Memory L2
ENSG00000116221 MRPL37 812666 sc-eQTL 7.08e-01 0.0286 0.0762 0.33 B_Memory L2
ENSG00000157216 SSBP3 583228 sc-eQTL 9.98e-01 0.000211 0.0712 0.33 B_Memory L2
ENSG00000162402 USP24 -218657 sc-eQTL 5.38e-01 0.0429 0.0695 0.33 B_Memory L2
ENSG00000215883 CYB5RL 796671 sc-eQTL 1.21e-02 0.215 0.0848 0.33 B_Memory L2
ENSG00000243725 TTC4 280846 sc-eQTL 3.70e-01 -0.0799 0.089 0.33 B_Memory L2
ENSG00000006555 TTC22 195384 sc-eQTL 6.54e-01 0.0392 0.0873 0.331 B_Naive1 L2
ENSG00000116133 DHCR24 109512 sc-eQTL 9.84e-01 0.00168 0.0819 0.331 B_Naive1 L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 5.17e-01 0.0474 0.073 0.331 B_Naive1 L2
ENSG00000116209 TMEM59 943203 sc-eQTL 3.60e-01 -0.0486 0.053 0.331 B_Naive1 L2
ENSG00000116221 MRPL37 812666 sc-eQTL 3.52e-01 0.0729 0.0781 0.331 B_Naive1 L2
ENSG00000157216 SSBP3 583228 sc-eQTL 1.84e-01 0.099 0.0742 0.331 B_Naive1 L2
ENSG00000162402 USP24 -218657 sc-eQTL 4.47e-01 0.0447 0.0586 0.331 B_Naive1 L2
ENSG00000215883 CYB5RL 796671 sc-eQTL 7.69e-01 -0.0261 0.0886 0.331 B_Naive1 L2
ENSG00000243725 TTC4 280846 sc-eQTL 2.56e-01 0.0908 0.0797 0.331 B_Naive1 L2
ENSG00000006555 TTC22 195384 sc-eQTL 8.05e-01 0.0217 0.0882 0.333 B_Naive2 L2
ENSG00000116133 DHCR24 109512 sc-eQTL 1.03e-02 -0.196 0.0756 0.333 B_Naive2 L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 7.73e-01 -0.0246 0.0852 0.333 B_Naive2 L2
ENSG00000116209 TMEM59 943203 sc-eQTL 1.24e-01 -0.108 0.0698 0.333 B_Naive2 L2
ENSG00000116221 MRPL37 812666 sc-eQTL 6.05e-01 -0.0427 0.0825 0.333 B_Naive2 L2
ENSG00000157216 SSBP3 583228 sc-eQTL 9.86e-01 0.00142 0.0813 0.333 B_Naive2 L2
ENSG00000162402 USP24 -218657 sc-eQTL 2.66e-01 -0.0717 0.0643 0.333 B_Naive2 L2
ENSG00000215883 CYB5RL 796671 sc-eQTL 1.64e-01 -0.126 0.0903 0.333 B_Naive2 L2
ENSG00000243725 TTC4 280846 sc-eQTL 9.27e-01 -0.00868 0.0944 0.333 B_Naive2 L2
ENSG00000006555 TTC22 195384 sc-eQTL 6.98e-01 0.0325 0.0838 0.332 CD4_CTL L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 6.02e-02 -0.162 0.0855 0.332 CD4_CTL L2
ENSG00000116209 TMEM59 943203 sc-eQTL 6.91e-01 -0.0312 0.0784 0.332 CD4_CTL L2
ENSG00000116221 MRPL37 812666 sc-eQTL 3.20e-01 -0.096 0.0962 0.332 CD4_CTL L2
ENSG00000157216 SSBP3 583228 sc-eQTL 5.42e-01 0.0362 0.0593 0.332 CD4_CTL L2
ENSG00000162402 USP24 -218657 sc-eQTL 1.38e-02 0.199 0.0802 0.332 CD4_CTL L2
ENSG00000243725 TTC4 280846 sc-eQTL 1.37e-01 0.136 0.0907 0.332 CD4_CTL L2
ENSG00000006555 TTC22 195384 sc-eQTL 5.59e-02 -0.143 0.0746 0.331 CD4_Naive L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 3.10e-01 -0.0581 0.0571 0.331 CD4_Naive L2
ENSG00000116209 TMEM59 943203 sc-eQTL 6.50e-01 0.0253 0.0556 0.331 CD4_Naive L2
ENSG00000116221 MRPL37 812666 sc-eQTL 9.82e-01 0.00158 0.0717 0.331 CD4_Naive L2
ENSG00000157216 SSBP3 583228 sc-eQTL 1.21e-01 -0.0886 0.0569 0.331 CD4_Naive L2
ENSG00000162402 USP24 -218657 sc-eQTL 8.14e-01 0.0116 0.0494 0.331 CD4_Naive L2
ENSG00000243725 TTC4 280846 sc-eQTL 5.41e-02 0.145 0.0746 0.331 CD4_Naive L2
ENSG00000006555 TTC22 195384 sc-eQTL 5.41e-01 0.0485 0.0792 0.331 CD4_TCM L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 9.00e-01 0.00967 0.0771 0.331 CD4_TCM L2
ENSG00000116209 TMEM59 943203 sc-eQTL 2.54e-01 -0.0663 0.058 0.331 CD4_TCM L2
ENSG00000116221 MRPL37 812666 sc-eQTL 9.34e-01 0.00607 0.0732 0.331 CD4_TCM L2
ENSG00000157216 SSBP3 583228 sc-eQTL 1.70e-02 -0.17 0.0708 0.331 CD4_TCM L2
ENSG00000162402 USP24 -218657 sc-eQTL 5.45e-01 -0.036 0.0594 0.331 CD4_TCM L2
ENSG00000243725 TTC4 280846 sc-eQTL 4.19e-01 0.0693 0.0855 0.331 CD4_TCM L2
ENSG00000006555 TTC22 195384 sc-eQTL 4.33e-01 -0.0714 0.091 0.331 CD4_TEM L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 4.21e-01 0.0694 0.0862 0.331 CD4_TEM L2
ENSG00000116209 TMEM59 943203 sc-eQTL 4.71e-01 0.0483 0.0668 0.331 CD4_TEM L2
ENSG00000116221 MRPL37 812666 sc-eQTL 7.38e-01 -0.0289 0.0861 0.331 CD4_TEM L2
ENSG00000157216 SSBP3 583228 sc-eQTL 4.21e-01 0.0594 0.0737 0.331 CD4_TEM L2
ENSG00000162402 USP24 -218657 sc-eQTL 2.51e-02 0.15 0.0664 0.331 CD4_TEM L2
ENSG00000243725 TTC4 280846 sc-eQTL 5.14e-01 0.0579 0.0887 0.331 CD4_TEM L2
ENSG00000006555 TTC22 195384 sc-eQTL 5.68e-01 -0.0422 0.0738 0.331 CD8_CTL L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 9.33e-01 -0.00683 0.0817 0.331 CD8_CTL L2
ENSG00000116209 TMEM59 943203 sc-eQTL 3.17e-01 -0.0711 0.0709 0.331 CD8_CTL L2
ENSG00000116221 MRPL37 812666 sc-eQTL 7.27e-01 0.0294 0.0842 0.331 CD8_CTL L2
ENSG00000157216 SSBP3 583228 sc-eQTL 2.59e-01 -0.065 0.0574 0.331 CD8_CTL L2
ENSG00000162402 USP24 -218657 sc-eQTL 6.54e-01 0.0257 0.0572 0.331 CD8_CTL L2
ENSG00000243725 TTC4 280846 sc-eQTL 9.20e-01 -0.00858 0.0857 0.331 CD8_CTL L2
ENSG00000006555 TTC22 195384 sc-eQTL 9.88e-01 -0.00122 0.0815 0.331 CD8_Naive L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 7.11e-01 -0.0274 0.0737 0.331 CD8_Naive L2
ENSG00000116209 TMEM59 943203 sc-eQTL 8.00e-01 -0.0183 0.0721 0.331 CD8_Naive L2
ENSG00000116221 MRPL37 812666 sc-eQTL 6.89e-01 -0.0346 0.0865 0.331 CD8_Naive L2
ENSG00000157216 SSBP3 583228 sc-eQTL 1.20e-01 -0.102 0.0651 0.331 CD8_Naive L2
ENSG00000162402 USP24 -218657 sc-eQTL 2.07e-01 0.075 0.0593 0.331 CD8_Naive L2
ENSG00000243725 TTC4 280846 sc-eQTL 3.22e-01 0.0863 0.0869 0.331 CD8_Naive L2
ENSG00000006555 TTC22 195384 sc-eQTL 8.71e-01 -0.0144 0.0888 0.343 CD8_TCM L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 4.47e-01 -0.068 0.0892 0.343 CD8_TCM L2
ENSG00000116209 TMEM59 943203 sc-eQTL 2.04e-01 -0.0997 0.0783 0.343 CD8_TCM L2
ENSG00000116221 MRPL37 812666 sc-eQTL 1.32e-01 -0.134 0.0886 0.343 CD8_TCM L2
ENSG00000157216 SSBP3 583228 sc-eQTL 2.37e-01 -0.0914 0.0771 0.343 CD8_TCM L2
ENSG00000162402 USP24 -218657 sc-eQTL 5.38e-01 0.0462 0.0749 0.343 CD8_TCM L2
ENSG00000243725 TTC4 280846 sc-eQTL 6.94e-01 0.0359 0.0911 0.343 CD8_TCM L2
ENSG00000006555 TTC22 195384 sc-eQTL 3.03e-01 0.0898 0.0871 0.317 CD8_TEM L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 4.03e-02 -0.186 0.0901 0.317 CD8_TEM L2
ENSG00000116209 TMEM59 943203 sc-eQTL 7.48e-01 -0.0284 0.0881 0.317 CD8_TEM L2
ENSG00000116221 MRPL37 812666 sc-eQTL 5.84e-01 -0.049 0.0892 0.317 CD8_TEM L2
ENSG00000157216 SSBP3 583228 sc-eQTL 6.03e-01 0.044 0.0844 0.317 CD8_TEM L2
ENSG00000162402 USP24 -218657 sc-eQTL 8.51e-01 -0.0168 0.089 0.317 CD8_TEM L2
ENSG00000243725 TTC4 280846 sc-eQTL 8.92e-01 -0.0123 0.0904 0.317 CD8_TEM L2
ENSG00000006555 TTC22 195384 sc-eQTL 2.18e-01 -0.1 0.0811 0.329 MAIT L2
ENSG00000116133 DHCR24 109512 sc-eQTL 1.45e-01 0.0878 0.06 0.329 MAIT L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 5.81e-01 0.0468 0.0848 0.329 MAIT L2
ENSG00000116209 TMEM59 943203 sc-eQTL 2.94e-01 -0.0804 0.0764 0.329 MAIT L2
ENSG00000116221 MRPL37 812666 sc-eQTL 8.90e-01 -0.0128 0.0932 0.329 MAIT L2
ENSG00000157216 SSBP3 583228 sc-eQTL 1.79e-01 -0.111 0.0822 0.329 MAIT L2
ENSG00000162402 USP24 -218657 sc-eQTL 5.48e-01 0.044 0.0732 0.329 MAIT L2
ENSG00000215883 CYB5RL 796671 sc-eQTL 9.06e-01 -0.01 0.0852 0.329 MAIT L2
ENSG00000243725 TTC4 280846 sc-eQTL 9.93e-01 -0.000737 0.0847 0.329 MAIT L2
ENSG00000006555 TTC22 195384 sc-eQTL 7.24e-01 -0.0315 0.0891 0.331 NK_CD56bright L2
ENSG00000116133 DHCR24 109512 sc-eQTL 8.24e-01 0.0175 0.0787 0.331 NK_CD56bright L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 9.56e-01 0.00458 0.0832 0.331 NK_CD56bright L2
ENSG00000116209 TMEM59 943203 sc-eQTL 1.38e-01 0.12 0.0807 0.331 NK_CD56bright L2
ENSG00000116221 MRPL37 812666 sc-eQTL 6.63e-01 0.0395 0.0906 0.331 NK_CD56bright L2
ENSG00000157216 SSBP3 583228 sc-eQTL 9.37e-01 0.00545 0.0683 0.331 NK_CD56bright L2
ENSG00000162398 LEXM 190644 sc-eQTL 4.71e-01 0.0582 0.0805 0.331 NK_CD56bright L2
ENSG00000162402 USP24 -218657 sc-eQTL 2.03e-01 0.0882 0.0691 0.331 NK_CD56bright L2
ENSG00000243725 TTC4 280846 sc-eQTL 5.10e-01 -0.0577 0.0874 0.331 NK_CD56bright L2
ENSG00000006555 TTC22 195384 sc-eQTL 5.35e-01 0.0463 0.0744 0.328 NK_CD56dim L2
ENSG00000116133 DHCR24 109512 sc-eQTL 8.59e-01 0.0138 0.0777 0.328 NK_CD56dim L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 1.44e-01 0.123 0.0837 0.328 NK_CD56dim L2
ENSG00000116209 TMEM59 943203 sc-eQTL 7.61e-01 0.019 0.0623 0.328 NK_CD56dim L2
ENSG00000116221 MRPL37 812666 sc-eQTL 6.26e-01 0.0395 0.081 0.328 NK_CD56dim L2
ENSG00000157216 SSBP3 583228 sc-eQTL 6.47e-01 -0.0304 0.0664 0.328 NK_CD56dim L2
ENSG00000162398 LEXM 190644 sc-eQTL 2.00e-02 -0.177 0.0754 0.328 NK_CD56dim L2
ENSG00000162402 USP24 -218657 sc-eQTL 6.30e-02 0.0899 0.0481 0.328 NK_CD56dim L2
ENSG00000243725 TTC4 280846 sc-eQTL 2.98e-01 0.0864 0.0829 0.328 NK_CD56dim L2
ENSG00000006555 TTC22 195384 sc-eQTL 2.68e-01 -0.101 0.0909 0.329 NK_HLA L2
ENSG00000116133 DHCR24 109512 sc-eQTL 9.95e-01 -0.000541 0.0889 0.329 NK_HLA L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 1.45e-01 -0.125 0.0853 0.329 NK_HLA L2
ENSG00000116209 TMEM59 943203 sc-eQTL 6.19e-01 0.0424 0.0851 0.329 NK_HLA L2
ENSG00000116221 MRPL37 812666 sc-eQTL 8.10e-01 0.0226 0.0939 0.329 NK_HLA L2
ENSG00000157216 SSBP3 583228 sc-eQTL 2.54e-01 -0.0874 0.0763 0.329 NK_HLA L2
ENSG00000162398 LEXM 190644 sc-eQTL 7.92e-02 -0.151 0.0857 0.329 NK_HLA L2
ENSG00000162402 USP24 -218657 sc-eQTL 5.57e-01 -0.0372 0.0633 0.329 NK_HLA L2
ENSG00000243725 TTC4 280846 sc-eQTL 9.00e-01 0.0119 0.0947 0.329 NK_HLA L2
ENSG00000006555 TTC22 195384 sc-eQTL 1.91e-01 0.105 0.0802 0.328 NK_cytokine L2
ENSG00000116133 DHCR24 109512 sc-eQTL 8.84e-01 0.0119 0.0814 0.328 NK_cytokine L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 6.99e-01 -0.0313 0.0808 0.328 NK_cytokine L2
ENSG00000116209 TMEM59 943203 sc-eQTL 8.02e-01 0.0165 0.0657 0.328 NK_cytokine L2
ENSG00000116221 MRPL37 812666 sc-eQTL 3.57e-01 -0.0746 0.0808 0.328 NK_cytokine L2
ENSG00000157216 SSBP3 583228 sc-eQTL 3.82e-01 -0.0594 0.0678 0.328 NK_cytokine L2
ENSG00000162398 LEXM 190644 sc-eQTL 9.34e-01 0.00702 0.0849 0.328 NK_cytokine L2
ENSG00000162402 USP24 -218657 sc-eQTL 3.40e-01 0.0552 0.0577 0.328 NK_cytokine L2
ENSG00000243725 TTC4 280846 sc-eQTL 4.52e-01 0.0646 0.0857 0.328 NK_cytokine L2
ENSG00000006555 TTC22 195384 sc-eQTL 8.94e-01 -0.0136 0.102 0.311 PB L2
ENSG00000116133 DHCR24 109512 sc-eQTL 4.52e-01 0.0682 0.0905 0.311 PB L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 2.90e-01 -0.117 0.11 0.311 PB L2
ENSG00000116209 TMEM59 943203 sc-eQTL 9.15e-02 -0.0776 0.0456 0.311 PB L2
ENSG00000116221 MRPL37 812666 sc-eQTL 8.40e-01 0.0169 0.0839 0.311 PB L2
ENSG00000157216 SSBP3 583228 sc-eQTL 6.02e-01 -0.0506 0.0968 0.311 PB L2
ENSG00000162402 USP24 -218657 sc-eQTL 8.23e-01 0.0247 0.11 0.311 PB L2
ENSG00000215883 CYB5RL 796671 sc-eQTL 9.50e-01 0.00716 0.114 0.311 PB L2
ENSG00000243725 TTC4 280846 sc-eQTL 7.66e-01 -0.0318 0.106 0.311 PB L2
ENSG00000006555 TTC22 195384 sc-eQTL 3.32e-01 -0.0786 0.0807 0.335 Pro_T L2
ENSG00000116133 DHCR24 109512 sc-eQTL 9.99e-01 0.000125 0.0688 0.335 Pro_T L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 5.73e-02 -0.159 0.0832 0.335 Pro_T L2
ENSG00000116209 TMEM59 943203 sc-eQTL 2.49e-01 0.0671 0.058 0.335 Pro_T L2
ENSG00000116221 MRPL37 812666 sc-eQTL 4.22e-01 0.0458 0.0569 0.335 Pro_T L2
ENSG00000157216 SSBP3 583228 sc-eQTL 9.00e-01 -0.00805 0.064 0.335 Pro_T L2
ENSG00000162402 USP24 -218657 sc-eQTL 5.20e-02 0.151 0.0773 0.335 Pro_T L2
ENSG00000215883 CYB5RL 796671 sc-eQTL 1.60e-02 0.184 0.0759 0.335 Pro_T L2
ENSG00000243725 TTC4 280846 sc-eQTL 2.86e-01 0.0913 0.0854 0.335 Pro_T L2
ENSG00000006555 TTC22 195384 sc-eQTL 3.85e-01 0.0716 0.0823 0.331 Treg L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 5.94e-01 0.0472 0.0883 0.331 Treg L2
ENSG00000116209 TMEM59 943203 sc-eQTL 4.72e-01 0.0503 0.0698 0.331 Treg L2
ENSG00000116221 MRPL37 812666 sc-eQTL 5.47e-01 0.052 0.0864 0.331 Treg L2
ENSG00000157216 SSBP3 583228 sc-eQTL 6.88e-01 0.031 0.0771 0.331 Treg L2
ENSG00000162402 USP24 -218657 sc-eQTL 3.29e-01 0.0716 0.0733 0.331 Treg L2
ENSG00000243725 TTC4 280846 sc-eQTL 4.81e-01 0.0652 0.0924 0.331 Treg L2
ENSG00000116133 DHCR24 109512 sc-eQTL 9.23e-01 0.00724 0.0746 0.32 cDC L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 1.03e-01 0.143 0.0873 0.32 cDC L2
ENSG00000116209 TMEM59 943203 sc-eQTL 5.73e-01 0.0422 0.0746 0.32 cDC L2
ENSG00000116221 MRPL37 812666 sc-eQTL 9.92e-01 0.000913 0.0956 0.32 cDC L2
ENSG00000157216 SSBP3 583228 sc-eQTL 6.49e-01 -0.0401 0.0881 0.32 cDC L2
ENSG00000162390 ACOT11 454450 sc-eQTL 5.98e-01 -0.0432 0.0819 0.32 cDC L2
ENSG00000162402 USP24 -218657 sc-eQTL 1.46e-02 -0.223 0.0904 0.32 cDC L2
ENSG00000215883 CYB5RL 796671 sc-eQTL 4.14e-01 0.0644 0.0788 0.32 cDC L2
ENSG00000243725 TTC4 280846 sc-eQTL 8.22e-01 0.0212 0.0942 0.32 cDC L2
ENSG00000116133 DHCR24 109512 sc-eQTL 9.44e-01 -0.00373 0.0534 0.331 cMono_IL1B L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 3.97e-02 0.152 0.0735 0.331 cMono_IL1B L2
ENSG00000116209 TMEM59 943203 sc-eQTL 3.14e-01 0.0453 0.0449 0.331 cMono_IL1B L2
ENSG00000116221 MRPL37 812666 sc-eQTL 9.82e-02 0.132 0.0797 0.331 cMono_IL1B L2
ENSG00000157216 SSBP3 583228 sc-eQTL 5.49e-01 -0.0491 0.0818 0.331 cMono_IL1B L2
ENSG00000162402 USP24 -218657 sc-eQTL 8.60e-01 0.0106 0.0605 0.331 cMono_IL1B L2
ENSG00000243725 TTC4 280846 sc-eQTL 9.78e-01 -0.00257 0.0925 0.331 cMono_IL1B L2
ENSG00000116133 DHCR24 109512 sc-eQTL 4.56e-01 -0.0375 0.0502 0.331 cMono_S100A L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 8.25e-01 -0.017 0.0767 0.331 cMono_S100A L2
ENSG00000116209 TMEM59 943203 sc-eQTL 9.47e-01 -0.00412 0.0614 0.331 cMono_S100A L2
ENSG00000116221 MRPL37 812666 sc-eQTL 1.18e-01 0.139 0.0883 0.331 cMono_S100A L2
ENSG00000157216 SSBP3 583228 sc-eQTL 3.41e-02 -0.194 0.0911 0.331 cMono_S100A L2
ENSG00000162402 USP24 -218657 sc-eQTL 9.50e-01 0.00468 0.0746 0.331 cMono_S100A L2
ENSG00000243725 TTC4 280846 sc-eQTL 5.65e-01 -0.0538 0.0933 0.331 cMono_S100A L2
ENSG00000006555 TTC22 195384 sc-eQTL 8.49e-01 -0.0161 0.0846 0.33 gdT L2
ENSG00000116133 DHCR24 109512 sc-eQTL 2.42e-01 0.11 0.0939 0.33 gdT L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 1.65e-01 -0.131 0.0941 0.33 gdT L2
ENSG00000116209 TMEM59 943203 sc-eQTL 8.26e-01 0.0211 0.0961 0.33 gdT L2
ENSG00000116221 MRPL37 812666 sc-eQTL 6.51e-01 -0.05 0.11 0.33 gdT L2
ENSG00000157216 SSBP3 583228 sc-eQTL 8.11e-01 -0.0162 0.0675 0.33 gdT L2
ENSG00000162402 USP24 -218657 sc-eQTL 9.26e-01 -0.00839 0.0907 0.33 gdT L2
ENSG00000215883 CYB5RL 796671 sc-eQTL 8.96e-01 -0.0123 0.0942 0.33 gdT L2
ENSG00000243725 TTC4 280846 sc-eQTL 5.64e-01 -0.0613 0.106 0.33 gdT L2
ENSG00000116133 DHCR24 109512 sc-eQTL 3.42e-01 0.0643 0.0675 0.32 intMono L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 2.03e-01 0.107 0.0839 0.32 intMono L2
ENSG00000116209 TMEM59 943203 sc-eQTL 1.60e-01 0.0869 0.0616 0.32 intMono L2
ENSG00000116221 MRPL37 812666 sc-eQTL 3.85e-01 -0.0823 0.0945 0.32 intMono L2
ENSG00000157216 SSBP3 583228 sc-eQTL 2.02e-01 -0.123 0.0962 0.32 intMono L2
ENSG00000162402 USP24 -218657 sc-eQTL 6.53e-01 0.0388 0.0862 0.32 intMono L2
ENSG00000243725 TTC4 280846 sc-eQTL 8.61e-01 -0.0161 0.0918 0.32 intMono L2
ENSG00000116133 DHCR24 109512 sc-eQTL 9.14e-01 -0.00715 0.0665 0.326 ncMono L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 5.88e-01 0.045 0.0831 0.326 ncMono L2
ENSG00000116209 TMEM59 943203 sc-eQTL 1.69e-02 0.158 0.0656 0.326 ncMono L2
ENSG00000116221 MRPL37 812666 sc-eQTL 7.45e-01 -0.028 0.0858 0.326 ncMono L2
ENSG00000157216 SSBP3 583228 sc-eQTL 1.27e-01 -0.143 0.0933 0.326 ncMono L2
ENSG00000162402 USP24 -218657 sc-eQTL 1.25e-01 0.115 0.0746 0.326 ncMono L2
ENSG00000243725 TTC4 280846 sc-eQTL 4.25e-01 -0.0708 0.0886 0.326 ncMono L2
ENSG00000116133 DHCR24 109512 sc-eQTL 3.89e-01 0.0679 0.0786 0.331 pDC L2
ENSG00000116205 TCEANC2 943123 sc-eQTL 7.42e-01 -0.0311 0.0944 0.331 pDC L2
ENSG00000116209 TMEM59 943203 sc-eQTL 5.08e-01 0.05 0.0753 0.331 pDC L2
ENSG00000116221 MRPL37 812666 sc-eQTL 5.80e-01 -0.0555 0.1 0.331 pDC L2
ENSG00000157216 SSBP3 583228 sc-eQTL 1.79e-01 0.12 0.0885 0.331 pDC L2
ENSG00000162390 ACOT11 454450 sc-eQTL 8.06e-01 -0.00922 0.0374 0.331 pDC L2
ENSG00000162402 USP24 -218657 sc-eQTL 5.60e-01 0.0369 0.0631 0.331 pDC L2
ENSG00000215883 CYB5RL 796671 sc-eQTL 4.44e-01 0.0662 0.0862 0.331 pDC L2
ENSG00000243725 TTC4 280846 sc-eQTL 7.92e-01 -0.0263 0.0997 0.331 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 195384 sc-eQTL 8.21e-01 0.0191 0.0839 0.331 B_Memory LOneK1K
ENSG00000116133 DHCR24 109512 sc-eQTL 6.98e-01 0.0327 0.0842 0.331 B_Memory LOneK1K
ENSG00000116205 TCEANC2 943123 sc-eQTL 3.21e-01 -0.0808 0.0812 0.331 B_Memory LOneK1K
ENSG00000116209 TMEM59 943203 sc-eQTL 2.61e-01 -0.0711 0.0632 0.331 B_Memory LOneK1K
ENSG00000116221 MRPL37 812666 sc-eQTL 8.04e-01 0.0188 0.0758 0.331 B_Memory LOneK1K
ENSG00000157216 SSBP3 583228 sc-eQTL 5.06e-01 0.0439 0.0659 0.331 B_Memory LOneK1K
ENSG00000162402 USP24 -218657 sc-eQTL 5.19e-02 0.117 0.0596 0.331 B_Memory LOneK1K
ENSG00000215883 CYB5RL 796671 sc-eQTL 1.57e-01 0.131 0.092 0.331 B_Memory LOneK1K
ENSG00000243725 TTC4 280846 sc-eQTL 6.69e-01 0.0356 0.083 0.331 B_Memory LOneK1K
ENSG00000006555 TTC22 195384 sc-eQTL 7.35e-01 0.0299 0.0881 0.331 B_Naive LOneK1K
ENSG00000116133 DHCR24 109512 sc-eQTL 1.59e-01 -0.112 0.079 0.331 B_Naive LOneK1K
ENSG00000116205 TCEANC2 943123 sc-eQTL 7.97e-01 0.0184 0.0716 0.331 B_Naive LOneK1K
ENSG00000116209 TMEM59 943203 sc-eQTL 6.54e-02 -0.0936 0.0505 0.331 B_Naive LOneK1K
ENSG00000116221 MRPL37 812666 sc-eQTL 7.00e-01 0.0283 0.0732 0.331 B_Naive LOneK1K
ENSG00000157216 SSBP3 583228 sc-eQTL 3.99e-01 0.0552 0.0654 0.331 B_Naive LOneK1K
ENSG00000162402 USP24 -218657 sc-eQTL 9.46e-01 -0.00381 0.0562 0.331 B_Naive LOneK1K
ENSG00000215883 CYB5RL 796671 sc-eQTL 3.32e-01 -0.0863 0.0887 0.331 B_Naive LOneK1K
ENSG00000243725 TTC4 280846 sc-eQTL 4.50e-01 0.0633 0.0836 0.331 B_Naive LOneK1K
ENSG00000116133 DHCR24 109512 sc-eQTL 6.24e-01 -0.0253 0.0517 0.331 CD14_Mono LOneK1K
ENSG00000116205 TCEANC2 943123 sc-eQTL 1.61e-01 0.0906 0.0644 0.331 CD14_Mono LOneK1K
ENSG00000116209 TMEM59 943203 sc-eQTL 5.59e-01 0.0261 0.0446 0.331 CD14_Mono LOneK1K
ENSG00000116221 MRPL37 812666 sc-eQTL 5.18e-02 0.153 0.0783 0.331 CD14_Mono LOneK1K
ENSG00000157216 SSBP3 583228 sc-eQTL 1.35e-01 -0.123 0.0822 0.331 CD14_Mono LOneK1K
ENSG00000162402 USP24 -218657 sc-eQTL 9.24e-01 0.00539 0.0565 0.331 CD14_Mono LOneK1K
ENSG00000243725 TTC4 280846 sc-eQTL 4.57e-01 -0.0697 0.0936 0.331 CD14_Mono LOneK1K
ENSG00000116133 DHCR24 109512 sc-eQTL 8.94e-01 0.00832 0.0624 0.33 CD16_Mono LOneK1K
ENSG00000116205 TCEANC2 943123 sc-eQTL 9.61e-02 0.136 0.0815 0.33 CD16_Mono LOneK1K
ENSG00000116209 TMEM59 943203 sc-eQTL 9.39e-03 0.157 0.06 0.33 CD16_Mono LOneK1K
ENSG00000116221 MRPL37 812666 sc-eQTL 1.86e-01 -0.11 0.0832 0.33 CD16_Mono LOneK1K
ENSG00000157216 SSBP3 583228 sc-eQTL 3.05e-02 -0.192 0.0882 0.33 CD16_Mono LOneK1K
ENSG00000162402 USP24 -218657 sc-eQTL 4.03e-01 0.0587 0.0702 0.33 CD16_Mono LOneK1K
ENSG00000243725 TTC4 280846 sc-eQTL 5.45e-01 -0.0534 0.088 0.33 CD16_Mono LOneK1K
ENSG00000006555 TTC22 195384 sc-eQTL 5.50e-01 0.0434 0.0726 0.328 NK_CD56dim LOneK1K
ENSG00000116133 DHCR24 109512 sc-eQTL 8.19e-01 0.0174 0.0758 0.328 NK_CD56dim LOneK1K
ENSG00000116205 TCEANC2 943123 sc-eQTL 1.92e-01 0.097 0.0741 0.328 NK_CD56dim LOneK1K
ENSG00000116209 TMEM59 943203 sc-eQTL 8.65e-01 0.00977 0.0575 0.328 NK_CD56dim LOneK1K
ENSG00000116221 MRPL37 812666 sc-eQTL 7.21e-01 0.0276 0.0771 0.328 NK_CD56dim LOneK1K
ENSG00000157216 SSBP3 583228 sc-eQTL 2.91e-01 -0.0667 0.0631 0.328 NK_CD56dim LOneK1K
ENSG00000162398 LEXM 190644 sc-eQTL 4.66e-02 -0.141 0.0706 0.328 NK_CD56dim LOneK1K
ENSG00000162402 USP24 -218657 sc-eQTL 6.66e-02 0.0827 0.0448 0.328 NK_CD56dim LOneK1K
ENSG00000243725 TTC4 280846 sc-eQTL 2.82e-01 0.0865 0.0802 0.328 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116133 DHCR24 109512 eQTL 0.0284 0.0595 0.0271 0.0 0.0 0.368

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina