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Genes within 1Mb (chr1:54990863:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 189540 sc-eQTL 3.46e-01 -0.0746 0.079 0.421 B L1
ENSG00000116133 DHCR24 103668 sc-eQTL 8.48e-01 0.0144 0.0749 0.421 B L1
ENSG00000116205 TCEANC2 937279 sc-eQTL 2.35e-01 0.0768 0.0644 0.421 B L1
ENSG00000116209 TMEM59 937359 sc-eQTL 3.01e-02 0.085 0.0389 0.421 B L1
ENSG00000116221 MRPL37 806822 sc-eQTL 2.51e-01 -0.0591 0.0513 0.421 B L1
ENSG00000157216 SSBP3 577384 sc-eQTL 1.87e-01 -0.071 0.0537 0.421 B L1
ENSG00000162402 USP24 -224501 sc-eQTL 4.23e-01 -0.0366 0.0456 0.421 B L1
ENSG00000215883 CYB5RL 790827 sc-eQTL 1.67e-01 -0.122 0.0876 0.421 B L1
ENSG00000243725 TTC4 275002 sc-eQTL 9.14e-01 -0.0083 0.0765 0.421 B L1
ENSG00000006555 TTC22 189540 sc-eQTL 6.12e-01 0.0314 0.0619 0.421 CD4T L1
ENSG00000116205 TCEANC2 937279 sc-eQTL 6.50e-01 0.023 0.0506 0.421 CD4T L1
ENSG00000116209 TMEM59 937359 sc-eQTL 2.57e-01 0.0534 0.047 0.421 CD4T L1
ENSG00000116221 MRPL37 806822 sc-eQTL 3.38e-01 -0.0624 0.065 0.421 CD4T L1
ENSG00000157216 SSBP3 577384 sc-eQTL 3.05e-01 0.0555 0.054 0.421 CD4T L1
ENSG00000162402 USP24 -224501 sc-eQTL 8.79e-01 0.00673 0.0441 0.421 CD4T L1
ENSG00000243725 TTC4 275002 sc-eQTL 6.47e-01 -0.0304 0.0663 0.421 CD4T L1
ENSG00000006555 TTC22 189540 sc-eQTL 9.26e-01 -0.00504 0.0544 0.421 CD8T L1
ENSG00000116205 TCEANC2 937279 sc-eQTL 4.11e-01 0.0557 0.0676 0.421 CD8T L1
ENSG00000116209 TMEM59 937359 sc-eQTL 3.12e-01 0.0476 0.0469 0.421 CD8T L1
ENSG00000116221 MRPL37 806822 sc-eQTL 8.62e-01 0.0113 0.0647 0.421 CD8T L1
ENSG00000157216 SSBP3 577384 sc-eQTL 9.40e-02 0.0777 0.0462 0.421 CD8T L1
ENSG00000162402 USP24 -224501 sc-eQTL 2.74e-01 -0.0492 0.0449 0.421 CD8T L1
ENSG00000243725 TTC4 275002 sc-eQTL 2.63e-01 0.0873 0.0778 0.421 CD8T L1
ENSG00000116133 DHCR24 103668 sc-eQTL 2.56e-01 0.0827 0.0725 0.417 DC L1
ENSG00000116205 TCEANC2 937279 sc-eQTL 4.10e-01 -0.0673 0.0814 0.417 DC L1
ENSG00000116209 TMEM59 937359 sc-eQTL 4.30e-01 -0.0506 0.064 0.417 DC L1
ENSG00000116221 MRPL37 806822 sc-eQTL 5.56e-01 -0.0507 0.086 0.417 DC L1
ENSG00000157216 SSBP3 577384 sc-eQTL 1.04e-01 0.124 0.0763 0.417 DC L1
ENSG00000162390 ACOT11 448606 sc-eQTL 4.22e-01 -0.0593 0.0737 0.417 DC L1
ENSG00000162402 USP24 -224501 sc-eQTL 9.48e-01 0.00288 0.0445 0.417 DC L1
ENSG00000215883 CYB5RL 790827 sc-eQTL 1.87e-01 -0.106 0.0802 0.417 DC L1
ENSG00000243725 TTC4 275002 sc-eQTL 6.12e-01 0.044 0.0866 0.417 DC L1
ENSG00000116133 DHCR24 103668 sc-eQTL 5.35e-01 0.0325 0.0524 0.421 Mono L1
ENSG00000116205 TCEANC2 937279 sc-eQTL 4.83e-02 -0.111 0.056 0.421 Mono L1
ENSG00000116209 TMEM59 937359 sc-eQTL 5.84e-01 0.023 0.042 0.421 Mono L1
ENSG00000116221 MRPL37 806822 sc-eQTL 5.97e-01 -0.0371 0.0702 0.421 Mono L1
ENSG00000157216 SSBP3 577384 sc-eQTL 4.99e-01 0.0545 0.0804 0.421 Mono L1
ENSG00000162402 USP24 -224501 sc-eQTL 4.16e-01 -0.039 0.0479 0.421 Mono L1
ENSG00000243725 TTC4 275002 sc-eQTL 3.46e-01 0.0796 0.0843 0.421 Mono L1
ENSG00000006555 TTC22 189540 sc-eQTL 2.88e-01 -0.0767 0.072 0.423 NK L1
ENSG00000116133 DHCR24 103668 sc-eQTL 5.95e-01 0.0388 0.0728 0.423 NK L1
ENSG00000116205 TCEANC2 937279 sc-eQTL 6.68e-01 -0.0308 0.0718 0.423 NK L1
ENSG00000116209 TMEM59 937359 sc-eQTL 1.67e-01 0.0777 0.0561 0.423 NK L1
ENSG00000116221 MRPL37 806822 sc-eQTL 7.35e-01 -0.0237 0.07 0.423 NK L1
ENSG00000157216 SSBP3 577384 sc-eQTL 9.79e-01 0.00164 0.0607 0.423 NK L1
ENSG00000162398 LEXM 184800 sc-eQTL 9.46e-01 0.00462 0.0681 0.423 NK L1
ENSG00000162402 USP24 -224501 sc-eQTL 7.79e-01 -0.0116 0.0413 0.423 NK L1
ENSG00000243725 TTC4 275002 sc-eQTL 6.08e-01 -0.0401 0.0781 0.423 NK L1
ENSG00000006555 TTC22 189540 sc-eQTL 5.71e-01 0.0367 0.0646 0.421 Other_T L1
ENSG00000116133 DHCR24 103668 sc-eQTL 2.87e-01 -0.0534 0.05 0.421 Other_T L1
ENSG00000116205 TCEANC2 937279 sc-eQTL 1.55e-01 -0.107 0.0747 0.421 Other_T L1
ENSG00000116209 TMEM59 937359 sc-eQTL 9.40e-01 0.00391 0.0515 0.421 Other_T L1
ENSG00000116221 MRPL37 806822 sc-eQTL 6.25e-01 -0.0236 0.0482 0.421 Other_T L1
ENSG00000157216 SSBP3 577384 sc-eQTL 4.06e-01 0.0465 0.0557 0.421 Other_T L1
ENSG00000162402 USP24 -224501 sc-eQTL 6.85e-01 -0.0242 0.0594 0.421 Other_T L1
ENSG00000215883 CYB5RL 790827 sc-eQTL 6.69e-01 0.0347 0.0812 0.421 Other_T L1
ENSG00000243725 TTC4 275002 sc-eQTL 4.96e-01 -0.0552 0.0809 0.421 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 189540 sc-eQTL 2.54e-01 -0.0745 0.0651 0.418 B_Activated L2
ENSG00000116133 DHCR24 103668 sc-eQTL 4.75e-01 -0.0548 0.0767 0.418 B_Activated L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 1.49e-01 0.119 0.0819 0.418 B_Activated L2
ENSG00000116209 TMEM59 937359 sc-eQTL 9.57e-01 -0.00475 0.0876 0.418 B_Activated L2
ENSG00000116221 MRPL37 806822 sc-eQTL 4.90e-01 0.0653 0.0945 0.418 B_Activated L2
ENSG00000157216 SSBP3 577384 sc-eQTL 1.03e-01 -0.139 0.085 0.418 B_Activated L2
ENSG00000162402 USP24 -224501 sc-eQTL 7.51e-01 -0.0265 0.0836 0.418 B_Activated L2
ENSG00000215883 CYB5RL 790827 sc-eQTL 3.65e-01 0.0669 0.0736 0.418 B_Activated L2
ENSG00000243725 TTC4 275002 sc-eQTL 9.52e-01 0.00482 0.08 0.418 B_Activated L2
ENSG00000006555 TTC22 189540 sc-eQTL 6.28e-01 0.0409 0.0843 0.421 B_Intermediate L2
ENSG00000116133 DHCR24 103668 sc-eQTL 4.22e-01 -0.0629 0.0782 0.421 B_Intermediate L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 1.81e-01 0.104 0.0776 0.421 B_Intermediate L2
ENSG00000116209 TMEM59 937359 sc-eQTL 7.50e-01 0.0213 0.0667 0.421 B_Intermediate L2
ENSG00000116221 MRPL37 806822 sc-eQTL 3.16e-01 -0.0787 0.0783 0.421 B_Intermediate L2
ENSG00000157216 SSBP3 577384 sc-eQTL 4.04e-01 -0.0613 0.0732 0.421 B_Intermediate L2
ENSG00000162402 USP24 -224501 sc-eQTL 5.54e-01 -0.0366 0.0617 0.421 B_Intermediate L2
ENSG00000215883 CYB5RL 790827 sc-eQTL 5.92e-01 -0.0469 0.0874 0.421 B_Intermediate L2
ENSG00000243725 TTC4 275002 sc-eQTL 6.87e-01 0.0321 0.0795 0.421 B_Intermediate L2
ENSG00000006555 TTC22 189540 sc-eQTL 3.21e-01 0.0817 0.0822 0.42 B_Memory L2
ENSG00000116133 DHCR24 103668 sc-eQTL 7.55e-01 0.0256 0.0817 0.42 B_Memory L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 4.79e-01 0.062 0.0873 0.42 B_Memory L2
ENSG00000116209 TMEM59 937359 sc-eQTL 3.70e-01 0.0653 0.0728 0.42 B_Memory L2
ENSG00000116221 MRPL37 806822 sc-eQTL 6.86e-01 -0.0298 0.0738 0.42 B_Memory L2
ENSG00000157216 SSBP3 577384 sc-eQTL 3.54e-02 -0.144 0.0682 0.42 B_Memory L2
ENSG00000162402 USP24 -224501 sc-eQTL 3.33e-01 0.0653 0.0672 0.42 B_Memory L2
ENSG00000215883 CYB5RL 790827 sc-eQTL 5.15e-01 -0.0543 0.0833 0.42 B_Memory L2
ENSG00000243725 TTC4 275002 sc-eQTL 3.21e-01 -0.0857 0.0862 0.42 B_Memory L2
ENSG00000006555 TTC22 189540 sc-eQTL 1.61e-01 -0.118 0.0837 0.421 B_Naive1 L2
ENSG00000116133 DHCR24 103668 sc-eQTL 2.54e-01 0.0899 0.0786 0.421 B_Naive1 L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 1.55e-01 -0.0999 0.07 0.421 B_Naive1 L2
ENSG00000116209 TMEM59 937359 sc-eQTL 3.64e-01 0.0464 0.051 0.421 B_Naive1 L2
ENSG00000116221 MRPL37 806822 sc-eQTL 5.71e-01 -0.0427 0.0753 0.421 B_Naive1 L2
ENSG00000157216 SSBP3 577384 sc-eQTL 4.89e-01 0.0497 0.0717 0.421 B_Naive1 L2
ENSG00000162402 USP24 -224501 sc-eQTL 9.31e-01 0.00489 0.0565 0.421 B_Naive1 L2
ENSG00000215883 CYB5RL 790827 sc-eQTL 5.79e-01 -0.0473 0.0852 0.421 B_Naive1 L2
ENSG00000243725 TTC4 275002 sc-eQTL 7.43e-01 0.0253 0.077 0.421 B_Naive1 L2
ENSG00000006555 TTC22 189540 sc-eQTL 9.97e-01 0.000298 0.0851 0.418 B_Naive2 L2
ENSG00000116133 DHCR24 103668 sc-eQTL 1.33e-02 0.182 0.073 0.418 B_Naive2 L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 3.39e-01 0.0787 0.0821 0.418 B_Naive2 L2
ENSG00000116209 TMEM59 937359 sc-eQTL 5.86e-01 0.0369 0.0677 0.418 B_Naive2 L2
ENSG00000116221 MRPL37 806822 sc-eQTL 3.71e-01 0.0714 0.0796 0.418 B_Naive2 L2
ENSG00000157216 SSBP3 577384 sc-eQTL 3.81e-01 -0.0688 0.0783 0.418 B_Naive2 L2
ENSG00000162402 USP24 -224501 sc-eQTL 7.22e-01 0.0222 0.0622 0.418 B_Naive2 L2
ENSG00000215883 CYB5RL 790827 sc-eQTL 7.47e-01 0.0283 0.0875 0.418 B_Naive2 L2
ENSG00000243725 TTC4 275002 sc-eQTL 8.21e-01 -0.0206 0.0911 0.418 B_Naive2 L2
ENSG00000006555 TTC22 189540 sc-eQTL 9.82e-01 0.00184 0.0829 0.42 CD4_CTL L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 7.84e-01 -0.0234 0.0853 0.42 CD4_CTL L2
ENSG00000116209 TMEM59 937359 sc-eQTL 3.63e-01 -0.0705 0.0774 0.42 CD4_CTL L2
ENSG00000116221 MRPL37 806822 sc-eQTL 6.11e-01 0.0486 0.0953 0.42 CD4_CTL L2
ENSG00000157216 SSBP3 577384 sc-eQTL 9.50e-01 0.0037 0.0587 0.42 CD4_CTL L2
ENSG00000162402 USP24 -224501 sc-eQTL 1.95e-01 -0.104 0.0802 0.42 CD4_CTL L2
ENSG00000243725 TTC4 275002 sc-eQTL 2.44e-02 -0.202 0.089 0.42 CD4_CTL L2
ENSG00000006555 TTC22 189540 sc-eQTL 5.35e-01 0.0452 0.0727 0.421 CD4_Naive L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 9.05e-01 0.00659 0.0554 0.421 CD4_Naive L2
ENSG00000116209 TMEM59 937359 sc-eQTL 1.69e-01 0.0741 0.0536 0.421 CD4_Naive L2
ENSG00000116221 MRPL37 806822 sc-eQTL 8.01e-01 -0.0175 0.0694 0.421 CD4_Naive L2
ENSG00000157216 SSBP3 577384 sc-eQTL 3.15e-01 0.0556 0.0553 0.421 CD4_Naive L2
ENSG00000162402 USP24 -224501 sc-eQTL 9.35e-01 -0.00392 0.0478 0.421 CD4_Naive L2
ENSG00000243725 TTC4 275002 sc-eQTL 8.22e-01 0.0164 0.0728 0.421 CD4_Naive L2
ENSG00000006555 TTC22 189540 sc-eQTL 4.63e-01 -0.0559 0.0759 0.421 CD4_TCM L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 8.12e-01 0.0176 0.0739 0.421 CD4_TCM L2
ENSG00000116209 TMEM59 937359 sc-eQTL 2.64e-01 0.0622 0.0556 0.421 CD4_TCM L2
ENSG00000116221 MRPL37 806822 sc-eQTL 1.92e-01 -0.0915 0.0699 0.421 CD4_TCM L2
ENSG00000157216 SSBP3 577384 sc-eQTL 3.57e-01 0.0634 0.0686 0.421 CD4_TCM L2
ENSG00000162402 USP24 -224501 sc-eQTL 2.55e-01 0.0648 0.0568 0.421 CD4_TCM L2
ENSG00000243725 TTC4 275002 sc-eQTL 6.82e-01 -0.0336 0.0821 0.421 CD4_TCM L2
ENSG00000006555 TTC22 189540 sc-eQTL 7.24e-01 -0.0312 0.0882 0.421 CD4_TEM L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 6.11e-01 -0.0426 0.0835 0.421 CD4_TEM L2
ENSG00000116209 TMEM59 937359 sc-eQTL 4.84e-01 -0.0454 0.0647 0.421 CD4_TEM L2
ENSG00000116221 MRPL37 806822 sc-eQTL 2.02e-01 0.106 0.083 0.421 CD4_TEM L2
ENSG00000157216 SSBP3 577384 sc-eQTL 9.48e-01 -0.00469 0.0715 0.421 CD4_TEM L2
ENSG00000162402 USP24 -224501 sc-eQTL 7.47e-01 -0.021 0.065 0.421 CD4_TEM L2
ENSG00000243725 TTC4 275002 sc-eQTL 6.52e-01 0.0388 0.0859 0.421 CD4_TEM L2
ENSG00000006555 TTC22 189540 sc-eQTL 1.69e-01 0.0971 0.0703 0.421 CD8_CTL L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 3.20e-01 -0.0778 0.078 0.421 CD8_CTL L2
ENSG00000116209 TMEM59 937359 sc-eQTL 2.84e-01 0.0729 0.0678 0.421 CD8_CTL L2
ENSG00000116221 MRPL37 806822 sc-eQTL 4.86e-01 0.0561 0.0805 0.421 CD8_CTL L2
ENSG00000157216 SSBP3 577384 sc-eQTL 2.80e-01 0.0595 0.0549 0.421 CD8_CTL L2
ENSG00000162402 USP24 -224501 sc-eQTL 7.61e-01 0.0167 0.0548 0.421 CD8_CTL L2
ENSG00000243725 TTC4 275002 sc-eQTL 4.22e-01 0.0659 0.0818 0.421 CD8_CTL L2
ENSG00000006555 TTC22 189540 sc-eQTL 9.05e-01 0.00943 0.0794 0.421 CD8_Naive L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 2.85e-01 0.0767 0.0716 0.421 CD8_Naive L2
ENSG00000116209 TMEM59 937359 sc-eQTL 2.04e-01 0.0891 0.07 0.421 CD8_Naive L2
ENSG00000116221 MRPL37 806822 sc-eQTL 4.83e-01 -0.0592 0.0842 0.421 CD8_Naive L2
ENSG00000157216 SSBP3 577384 sc-eQTL 2.97e-02 0.138 0.063 0.421 CD8_Naive L2
ENSG00000162402 USP24 -224501 sc-eQTL 8.26e-01 -0.0128 0.058 0.421 CD8_Naive L2
ENSG00000243725 TTC4 275002 sc-eQTL 1.53e-01 -0.121 0.0844 0.421 CD8_Naive L2
ENSG00000006555 TTC22 189540 sc-eQTL 5.58e-01 -0.0514 0.0876 0.419 CD8_TCM L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 6.34e-01 -0.042 0.0881 0.419 CD8_TCM L2
ENSG00000116209 TMEM59 937359 sc-eQTL 9.15e-01 -0.00827 0.0776 0.419 CD8_TCM L2
ENSG00000116221 MRPL37 806822 sc-eQTL 6.54e-01 0.0394 0.0879 0.419 CD8_TCM L2
ENSG00000157216 SSBP3 577384 sc-eQTL 4.96e-01 0.0521 0.0763 0.419 CD8_TCM L2
ENSG00000162402 USP24 -224501 sc-eQTL 3.92e-02 -0.152 0.0732 0.419 CD8_TCM L2
ENSG00000243725 TTC4 275002 sc-eQTL 2.26e-01 0.109 0.0897 0.419 CD8_TCM L2
ENSG00000006555 TTC22 189540 sc-eQTL 9.52e-01 -0.00499 0.0829 0.429 CD8_TEM L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 1.75e-01 0.117 0.0861 0.429 CD8_TEM L2
ENSG00000116209 TMEM59 937359 sc-eQTL 4.57e-01 -0.0623 0.0836 0.429 CD8_TEM L2
ENSG00000116221 MRPL37 806822 sc-eQTL 7.48e-01 0.0272 0.0848 0.429 CD8_TEM L2
ENSG00000157216 SSBP3 577384 sc-eQTL 5.82e-01 0.0442 0.0801 0.429 CD8_TEM L2
ENSG00000162402 USP24 -224501 sc-eQTL 3.31e-01 0.0822 0.0843 0.429 CD8_TEM L2
ENSG00000243725 TTC4 275002 sc-eQTL 3.14e-01 0.0864 0.0857 0.429 CD8_TEM L2
ENSG00000006555 TTC22 189540 sc-eQTL 1.95e-01 0.0988 0.076 0.42 MAIT L2
ENSG00000116133 DHCR24 103668 sc-eQTL 4.92e-01 -0.0389 0.0565 0.42 MAIT L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 2.12e-01 -0.0991 0.0793 0.42 MAIT L2
ENSG00000116209 TMEM59 937359 sc-eQTL 1.75e-01 0.0975 0.0716 0.42 MAIT L2
ENSG00000116221 MRPL37 806822 sc-eQTL 7.50e-01 0.0279 0.0874 0.42 MAIT L2
ENSG00000157216 SSBP3 577384 sc-eQTL 4.22e-01 0.0622 0.0773 0.42 MAIT L2
ENSG00000162402 USP24 -224501 sc-eQTL 5.19e-01 -0.0443 0.0687 0.42 MAIT L2
ENSG00000215883 CYB5RL 790827 sc-eQTL 6.33e-02 0.148 0.0793 0.42 MAIT L2
ENSG00000243725 TTC4 275002 sc-eQTL 4.95e-01 -0.0542 0.0793 0.42 MAIT L2
ENSG00000006555 TTC22 189540 sc-eQTL 6.38e-01 0.0404 0.0857 0.42 NK_CD56bright L2
ENSG00000116133 DHCR24 103668 sc-eQTL 1.67e-01 -0.104 0.0754 0.42 NK_CD56bright L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 8.87e-02 -0.136 0.0795 0.42 NK_CD56bright L2
ENSG00000116209 TMEM59 937359 sc-eQTL 2.16e-01 -0.0966 0.0778 0.42 NK_CD56bright L2
ENSG00000116221 MRPL37 806822 sc-eQTL 8.27e-01 0.0191 0.0872 0.42 NK_CD56bright L2
ENSG00000157216 SSBP3 577384 sc-eQTL 3.31e-01 0.0639 0.0656 0.42 NK_CD56bright L2
ENSG00000162398 LEXM 184800 sc-eQTL 6.82e-01 -0.0319 0.0776 0.42 NK_CD56bright L2
ENSG00000162402 USP24 -224501 sc-eQTL 7.10e-02 -0.12 0.0663 0.42 NK_CD56bright L2
ENSG00000243725 TTC4 275002 sc-eQTL 7.63e-01 0.0254 0.0842 0.42 NK_CD56bright L2
ENSG00000006555 TTC22 189540 sc-eQTL 7.38e-01 -0.0243 0.0727 0.425 NK_CD56dim L2
ENSG00000116133 DHCR24 103668 sc-eQTL 6.84e-01 0.0309 0.0758 0.425 NK_CD56dim L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 5.98e-01 -0.0434 0.0821 0.425 NK_CD56dim L2
ENSG00000116209 TMEM59 937359 sc-eQTL 2.77e-01 0.0662 0.0608 0.425 NK_CD56dim L2
ENSG00000116221 MRPL37 806822 sc-eQTL 1.98e-01 -0.102 0.0789 0.425 NK_CD56dim L2
ENSG00000157216 SSBP3 577384 sc-eQTL 9.04e-01 0.00785 0.0649 0.425 NK_CD56dim L2
ENSG00000162398 LEXM 184800 sc-eQTL 6.67e-01 0.0322 0.0746 0.425 NK_CD56dim L2
ENSG00000162402 USP24 -224501 sc-eQTL 4.80e-01 -0.0335 0.0474 0.425 NK_CD56dim L2
ENSG00000243725 TTC4 275002 sc-eQTL 2.84e-01 -0.087 0.0809 0.425 NK_CD56dim L2
ENSG00000006555 TTC22 189540 sc-eQTL 6.21e-01 0.0435 0.0878 0.422 NK_HLA L2
ENSG00000116133 DHCR24 103668 sc-eQTL 6.67e-01 -0.0369 0.0857 0.422 NK_HLA L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 2.86e-01 0.0881 0.0824 0.422 NK_HLA L2
ENSG00000116209 TMEM59 937359 sc-eQTL 7.21e-01 0.0294 0.0821 0.422 NK_HLA L2
ENSG00000116221 MRPL37 806822 sc-eQTL 5.14e-01 -0.0591 0.0904 0.422 NK_HLA L2
ENSG00000157216 SSBP3 577384 sc-eQTL 9.11e-01 0.00826 0.0738 0.422 NK_HLA L2
ENSG00000162398 LEXM 184800 sc-eQTL 8.01e-01 -0.021 0.0833 0.422 NK_HLA L2
ENSG00000162402 USP24 -224501 sc-eQTL 5.93e-02 0.115 0.0606 0.422 NK_HLA L2
ENSG00000243725 TTC4 275002 sc-eQTL 6.02e-01 0.0477 0.0912 0.422 NK_HLA L2
ENSG00000006555 TTC22 189540 sc-eQTL 1.88e-01 -0.102 0.0769 0.425 NK_cytokine L2
ENSG00000116133 DHCR24 103668 sc-eQTL 3.64e-01 0.071 0.078 0.425 NK_cytokine L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 1.77e-01 0.105 0.0772 0.425 NK_cytokine L2
ENSG00000116209 TMEM59 937359 sc-eQTL 1.42e-01 0.0924 0.0627 0.425 NK_cytokine L2
ENSG00000116221 MRPL37 806822 sc-eQTL 7.47e-01 0.0251 0.0777 0.425 NK_cytokine L2
ENSG00000157216 SSBP3 577384 sc-eQTL 9.57e-01 -0.00354 0.0652 0.425 NK_cytokine L2
ENSG00000162398 LEXM 184800 sc-eQTL 4.29e-01 -0.0645 0.0813 0.425 NK_cytokine L2
ENSG00000162402 USP24 -224501 sc-eQTL 8.11e-01 0.0133 0.0555 0.425 NK_cytokine L2
ENSG00000243725 TTC4 275002 sc-eQTL 4.57e-01 -0.0613 0.0822 0.425 NK_cytokine L2
ENSG00000006555 TTC22 189540 sc-eQTL 7.58e-01 0.0316 0.102 0.43 PB L2
ENSG00000116133 DHCR24 103668 sc-eQTL 8.35e-01 -0.0189 0.0906 0.43 PB L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 1.86e-01 -0.146 0.109 0.43 PB L2
ENSG00000116209 TMEM59 937359 sc-eQTL 1.30e-02 0.113 0.0448 0.43 PB L2
ENSG00000116221 MRPL37 806822 sc-eQTL 5.60e-01 -0.0489 0.0837 0.43 PB L2
ENSG00000157216 SSBP3 577384 sc-eQTL 5.72e-01 0.0547 0.0966 0.43 PB L2
ENSG00000162402 USP24 -224501 sc-eQTL 5.06e-01 0.0731 0.11 0.43 PB L2
ENSG00000215883 CYB5RL 790827 sc-eQTL 7.19e-01 0.041 0.114 0.43 PB L2
ENSG00000243725 TTC4 275002 sc-eQTL 9.50e-02 0.177 0.105 0.43 PB L2
ENSG00000006555 TTC22 189540 sc-eQTL 4.37e-01 -0.0617 0.0792 0.42 Pro_T L2
ENSG00000116133 DHCR24 103668 sc-eQTL 2.27e-01 -0.0815 0.0672 0.42 Pro_T L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 8.51e-01 0.0155 0.0823 0.42 Pro_T L2
ENSG00000116209 TMEM59 937359 sc-eQTL 9.81e-01 0.00137 0.0571 0.42 Pro_T L2
ENSG00000116221 MRPL37 806822 sc-eQTL 5.98e-01 -0.0296 0.0559 0.42 Pro_T L2
ENSG00000157216 SSBP3 577384 sc-eQTL 9.66e-02 0.104 0.0623 0.42 Pro_T L2
ENSG00000162402 USP24 -224501 sc-eQTL 8.01e-01 -0.0193 0.0765 0.42 Pro_T L2
ENSG00000215883 CYB5RL 790827 sc-eQTL 9.91e-02 -0.124 0.075 0.42 Pro_T L2
ENSG00000243725 TTC4 275002 sc-eQTL 9.24e-01 0.00807 0.084 0.42 Pro_T L2
ENSG00000006555 TTC22 189540 sc-eQTL 7.21e-01 0.0282 0.0789 0.421 Treg L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 6.94e-01 -0.0333 0.0845 0.421 Treg L2
ENSG00000116209 TMEM59 937359 sc-eQTL 5.38e-01 -0.0412 0.0668 0.421 Treg L2
ENSG00000116221 MRPL37 806822 sc-eQTL 1.25e-01 -0.127 0.0823 0.421 Treg L2
ENSG00000157216 SSBP3 577384 sc-eQTL 5.11e-01 0.0486 0.0737 0.421 Treg L2
ENSG00000162402 USP24 -224501 sc-eQTL 6.96e-01 0.0275 0.0703 0.421 Treg L2
ENSG00000243725 TTC4 275002 sc-eQTL 5.88e-02 -0.167 0.0878 0.421 Treg L2
ENSG00000116133 DHCR24 103668 sc-eQTL 1.75e-01 0.0965 0.0709 0.427 cDC L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 7.09e-01 -0.0314 0.084 0.427 cDC L2
ENSG00000116209 TMEM59 937359 sc-eQTL 5.43e-01 -0.0435 0.0713 0.427 cDC L2
ENSG00000116221 MRPL37 806822 sc-eQTL 9.07e-01 -0.0106 0.0914 0.427 cDC L2
ENSG00000157216 SSBP3 577384 sc-eQTL 2.87e-01 0.0896 0.084 0.427 cDC L2
ENSG00000162390 ACOT11 448606 sc-eQTL 4.48e-01 -0.0595 0.0782 0.427 cDC L2
ENSG00000162402 USP24 -224501 sc-eQTL 2.84e-01 0.0941 0.0876 0.427 cDC L2
ENSG00000215883 CYB5RL 790827 sc-eQTL 1.50e-01 -0.109 0.075 0.427 cDC L2
ENSG00000243725 TTC4 275002 sc-eQTL 4.60e-01 0.0666 0.09 0.427 cDC L2
ENSG00000116133 DHCR24 103668 sc-eQTL 5.83e-01 0.0279 0.0508 0.421 cMono_IL1B L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 3.09e-01 -0.0719 0.0704 0.421 cMono_IL1B L2
ENSG00000116209 TMEM59 937359 sc-eQTL 1.95e-01 -0.0555 0.0426 0.421 cMono_IL1B L2
ENSG00000116221 MRPL37 806822 sc-eQTL 7.45e-01 -0.0248 0.0763 0.421 cMono_IL1B L2
ENSG00000157216 SSBP3 577384 sc-eQTL 1.98e-01 0.1 0.0776 0.421 cMono_IL1B L2
ENSG00000162402 USP24 -224501 sc-eQTL 6.58e-01 -0.0255 0.0575 0.421 cMono_IL1B L2
ENSG00000243725 TTC4 275002 sc-eQTL 4.47e-01 0.067 0.0878 0.421 cMono_IL1B L2
ENSG00000116133 DHCR24 103668 sc-eQTL 2.80e-01 0.0518 0.0478 0.421 cMono_S100A L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 2.14e-01 -0.0908 0.0728 0.421 cMono_S100A L2
ENSG00000116209 TMEM59 937359 sc-eQTL 9.79e-01 0.00157 0.0585 0.421 cMono_S100A L2
ENSG00000116221 MRPL37 806822 sc-eQTL 4.38e-01 -0.0656 0.0844 0.421 cMono_S100A L2
ENSG00000157216 SSBP3 577384 sc-eQTL 8.91e-01 0.012 0.0877 0.421 cMono_S100A L2
ENSG00000162402 USP24 -224501 sc-eQTL 5.43e-01 0.0432 0.071 0.421 cMono_S100A L2
ENSG00000243725 TTC4 275002 sc-eQTL 5.50e-01 0.0532 0.0889 0.421 cMono_S100A L2
ENSG00000006555 TTC22 189540 sc-eQTL 4.67e-01 0.0594 0.0814 0.427 gdT L2
ENSG00000116133 DHCR24 103668 sc-eQTL 9.73e-01 -0.00312 0.0909 0.427 gdT L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 3.48e-01 0.0858 0.091 0.427 gdT L2
ENSG00000116209 TMEM59 937359 sc-eQTL 5.93e-01 -0.0496 0.0926 0.427 gdT L2
ENSG00000116221 MRPL37 806822 sc-eQTL 7.74e-01 0.0305 0.106 0.427 gdT L2
ENSG00000157216 SSBP3 577384 sc-eQTL 9.12e-01 -0.00722 0.065 0.427 gdT L2
ENSG00000162402 USP24 -224501 sc-eQTL 9.84e-01 0.00175 0.0874 0.427 gdT L2
ENSG00000215883 CYB5RL 790827 sc-eQTL 8.81e-01 -0.0136 0.0908 0.427 gdT L2
ENSG00000243725 TTC4 275002 sc-eQTL 2.54e-01 -0.117 0.102 0.427 gdT L2
ENSG00000116133 DHCR24 103668 sc-eQTL 2.40e-01 -0.0746 0.0632 0.433 intMono L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 3.74e-01 -0.0702 0.0789 0.433 intMono L2
ENSG00000116209 TMEM59 937359 sc-eQTL 3.90e-01 -0.05 0.0579 0.433 intMono L2
ENSG00000116221 MRPL37 806822 sc-eQTL 7.65e-01 0.0266 0.0888 0.433 intMono L2
ENSG00000157216 SSBP3 577384 sc-eQTL 9.43e-01 0.00646 0.0906 0.433 intMono L2
ENSG00000162402 USP24 -224501 sc-eQTL 3.49e-01 -0.0757 0.0807 0.433 intMono L2
ENSG00000243725 TTC4 275002 sc-eQTL 8.65e-01 0.0146 0.0861 0.433 intMono L2
ENSG00000116133 DHCR24 103668 sc-eQTL 6.18e-01 0.0312 0.0624 0.425 ncMono L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 9.31e-01 -0.00678 0.0781 0.425 ncMono L2
ENSG00000116209 TMEM59 937359 sc-eQTL 8.23e-01 0.014 0.0625 0.425 ncMono L2
ENSG00000116221 MRPL37 806822 sc-eQTL 6.43e-01 0.0374 0.0806 0.425 ncMono L2
ENSG00000157216 SSBP3 577384 sc-eQTL 3.32e-01 0.0855 0.0879 0.425 ncMono L2
ENSG00000162402 USP24 -224501 sc-eQTL 7.04e-01 -0.0268 0.0704 0.425 ncMono L2
ENSG00000243725 TTC4 275002 sc-eQTL 8.07e-01 0.0203 0.0833 0.425 ncMono L2
ENSG00000116133 DHCR24 103668 sc-eQTL 9.63e-01 0.0036 0.0778 0.418 pDC L2
ENSG00000116205 TCEANC2 937279 sc-eQTL 8.21e-01 0.0211 0.0933 0.418 pDC L2
ENSG00000116209 TMEM59 937359 sc-eQTL 2.23e-01 -0.0908 0.0742 0.418 pDC L2
ENSG00000116221 MRPL37 806822 sc-eQTL 5.86e-01 -0.054 0.0989 0.418 pDC L2
ENSG00000157216 SSBP3 577384 sc-eQTL 8.49e-01 0.0168 0.088 0.418 pDC L2
ENSG00000162390 ACOT11 448606 sc-eQTL 7.49e-01 0.0119 0.037 0.418 pDC L2
ENSG00000162402 USP24 -224501 sc-eQTL 2.56e-01 -0.0708 0.0622 0.418 pDC L2
ENSG00000215883 CYB5RL 790827 sc-eQTL 7.13e-01 -0.0314 0.0853 0.418 pDC L2
ENSG00000243725 TTC4 275002 sc-eQTL 3.40e-01 0.094 0.0983 0.418 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 189540 sc-eQTL 7.15e-01 -0.0296 0.081 0.421 B_Memory LOneK1K
ENSG00000116133 DHCR24 103668 sc-eQTL 5.17e-01 -0.0527 0.0813 0.421 B_Memory LOneK1K
ENSG00000116205 TCEANC2 937279 sc-eQTL 1.28e-02 0.194 0.0775 0.421 B_Memory LOneK1K
ENSG00000116209 TMEM59 937359 sc-eQTL 3.86e-01 0.0531 0.0611 0.421 B_Memory LOneK1K
ENSG00000116221 MRPL37 806822 sc-eQTL 1.38e-01 -0.109 0.0729 0.421 B_Memory LOneK1K
ENSG00000157216 SSBP3 577384 sc-eQTL 1.46e-01 -0.0925 0.0634 0.421 B_Memory LOneK1K
ENSG00000162402 USP24 -224501 sc-eQTL 4.20e-01 -0.0469 0.058 0.421 B_Memory LOneK1K
ENSG00000215883 CYB5RL 790827 sc-eQTL 4.21e-01 -0.0719 0.0891 0.421 B_Memory LOneK1K
ENSG00000243725 TTC4 275002 sc-eQTL 4.44e-01 -0.0614 0.0801 0.421 B_Memory LOneK1K
ENSG00000006555 TTC22 189540 sc-eQTL 3.35e-01 -0.0819 0.0848 0.421 B_Naive LOneK1K
ENSG00000116133 DHCR24 103668 sc-eQTL 4.66e-02 0.152 0.0759 0.421 B_Naive LOneK1K
ENSG00000116205 TCEANC2 937279 sc-eQTL 9.87e-01 -0.00113 0.0692 0.421 B_Naive LOneK1K
ENSG00000116209 TMEM59 937359 sc-eQTL 1.53e-01 0.0701 0.0489 0.421 B_Naive LOneK1K
ENSG00000116221 MRPL37 806822 sc-eQTL 9.88e-01 0.00107 0.0707 0.421 B_Naive LOneK1K
ENSG00000157216 SSBP3 577384 sc-eQTL 5.75e-01 0.0355 0.0632 0.421 B_Naive LOneK1K
ENSG00000162402 USP24 -224501 sc-eQTL 7.66e-01 0.0162 0.0542 0.421 B_Naive LOneK1K
ENSG00000215883 CYB5RL 790827 sc-eQTL 6.78e-01 -0.0357 0.0858 0.421 B_Naive LOneK1K
ENSG00000243725 TTC4 275002 sc-eQTL 7.80e-01 0.0226 0.0808 0.421 B_Naive LOneK1K
ENSG00000116133 DHCR24 103668 sc-eQTL 2.01e-01 0.063 0.0491 0.421 CD14_Mono LOneK1K
ENSG00000116205 TCEANC2 937279 sc-eQTL 1.96e-01 -0.0797 0.0615 0.421 CD14_Mono LOneK1K
ENSG00000116209 TMEM59 937359 sc-eQTL 6.42e-01 -0.0198 0.0425 0.421 CD14_Mono LOneK1K
ENSG00000116221 MRPL37 806822 sc-eQTL 4.00e-01 -0.0634 0.0752 0.421 CD14_Mono LOneK1K
ENSG00000157216 SSBP3 577384 sc-eQTL 3.78e-01 0.0695 0.0787 0.421 CD14_Mono LOneK1K
ENSG00000162402 USP24 -224501 sc-eQTL 9.11e-01 0.00602 0.0539 0.421 CD14_Mono LOneK1K
ENSG00000243725 TTC4 275002 sc-eQTL 2.28e-01 0.108 0.089 0.421 CD14_Mono LOneK1K
ENSG00000116133 DHCR24 103668 sc-eQTL 4.50e-01 -0.045 0.0594 0.422 CD16_Mono LOneK1K
ENSG00000116205 TCEANC2 937279 sc-eQTL 2.02e-01 -0.0998 0.0779 0.422 CD16_Mono LOneK1K
ENSG00000116209 TMEM59 937359 sc-eQTL 3.87e-01 -0.0504 0.0581 0.422 CD16_Mono LOneK1K
ENSG00000116221 MRPL37 806822 sc-eQTL 3.21e-01 0.079 0.0795 0.422 CD16_Mono LOneK1K
ENSG00000157216 SSBP3 577384 sc-eQTL 4.67e-01 0.0619 0.0849 0.422 CD16_Mono LOneK1K
ENSG00000162402 USP24 -224501 sc-eQTL 7.57e-01 -0.0207 0.067 0.422 CD16_Mono LOneK1K
ENSG00000243725 TTC4 275002 sc-eQTL 8.30e-01 0.018 0.084 0.422 CD16_Mono LOneK1K
ENSG00000006555 TTC22 189540 sc-eQTL 3.94e-01 -0.0602 0.0706 0.425 NK_CD56dim LOneK1K
ENSG00000116133 DHCR24 103668 sc-eQTL 4.37e-01 0.0575 0.0738 0.425 NK_CD56dim LOneK1K
ENSG00000116205 TCEANC2 937279 sc-eQTL 9.54e-01 -0.00415 0.0724 0.425 NK_CD56dim LOneK1K
ENSG00000116209 TMEM59 937359 sc-eQTL 7.36e-02 0.1 0.0556 0.425 NK_CD56dim LOneK1K
ENSG00000116221 MRPL37 806822 sc-eQTL 4.82e-01 -0.0528 0.075 0.425 NK_CD56dim LOneK1K
ENSG00000157216 SSBP3 577384 sc-eQTL 9.08e-01 0.00712 0.0616 0.425 NK_CD56dim LOneK1K
ENSG00000162398 LEXM 184800 sc-eQTL 9.51e-01 0.00425 0.0694 0.425 NK_CD56dim LOneK1K
ENSG00000162402 USP24 -224501 sc-eQTL 7.97e-01 -0.0113 0.044 0.425 NK_CD56dim LOneK1K
ENSG00000243725 TTC4 275002 sc-eQTL 1.37e-01 -0.116 0.078 0.425 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116133 DHCR24 103668 eQTL 0.000403 -0.0957 0.027 0.00225 0.0 0.384

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116133 DHCR24 103668 4.54e-06 5.09e-06 8.34e-07 2.96e-06 1.63e-06 1.68e-06 5.01e-06 1.09e-06 5.07e-06 2.65e-06 5.73e-06 3.27e-06 7.37e-06 2.04e-06 1.29e-06 3.69e-06 1.87e-06 3.49e-06 1.55e-06 1.15e-06 2.79e-06 4.9e-06 4.57e-06 1.46e-06 7.14e-06 1.94e-06 2.27e-06 1.55e-06 4.44e-06 4.39e-06 2.83e-06 3.85e-07 6.32e-07 1.65e-06 2.03e-06 1.17e-06 1.09e-06 4.39e-07 8.1e-07 5.61e-07 6.7e-07 5.59e-06 4.01e-07 1.46e-07 6.37e-07 1.18e-06 1.11e-06 6.9e-07 4.53e-07