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Genes within 1Mb (chr1:54963904:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 162581 sc-eQTL 6.71e-01 -0.0348 0.0816 0.611 B L1
ENSG00000116133 DHCR24 76709 sc-eQTL 7.69e-01 -0.0227 0.0772 0.611 B L1
ENSG00000116205 TCEANC2 910320 sc-eQTL 9.35e-02 0.112 0.0662 0.611 B L1
ENSG00000116209 TMEM59 910400 sc-eQTL 2.72e-01 -0.0446 0.0405 0.611 B L1
ENSG00000116221 MRPL37 779863 sc-eQTL 2.55e-01 0.0604 0.053 0.611 B L1
ENSG00000157216 SSBP3 550425 sc-eQTL 1.83e-01 0.074 0.0554 0.611 B L1
ENSG00000162402 USP24 -251460 sc-eQTL 6.09e-02 0.088 0.0467 0.611 B L1
ENSG00000215883 CYB5RL 763868 sc-eQTL 5.93e-01 -0.0486 0.0907 0.611 B L1
ENSG00000243725 TTC4 248043 sc-eQTL 4.96e-01 0.0538 0.0789 0.611 B L1
ENSG00000006555 TTC22 162581 sc-eQTL 1.42e-02 0.155 0.0628 0.611 CD4T L1
ENSG00000116205 TCEANC2 910320 sc-eQTL 6.30e-01 -0.0251 0.052 0.611 CD4T L1
ENSG00000116209 TMEM59 910400 sc-eQTL 4.52e-01 -0.0365 0.0484 0.611 CD4T L1
ENSG00000116221 MRPL37 779863 sc-eQTL 1.75e-01 0.0909 0.0667 0.611 CD4T L1
ENSG00000157216 SSBP3 550425 sc-eQTL 7.65e-01 0.0166 0.0556 0.611 CD4T L1
ENSG00000162402 USP24 -251460 sc-eQTL 1.54e-01 0.0645 0.0451 0.611 CD4T L1
ENSG00000243725 TTC4 248043 sc-eQTL 1.83e-01 0.0908 0.068 0.611 CD4T L1
ENSG00000006555 TTC22 162581 sc-eQTL 3.15e-01 0.0568 0.0564 0.611 CD8T L1
ENSG00000116205 TCEANC2 910320 sc-eQTL 8.92e-01 -0.00959 0.0704 0.611 CD8T L1
ENSG00000116209 TMEM59 910400 sc-eQTL 4.71e-01 -0.0353 0.0488 0.611 CD8T L1
ENSG00000116221 MRPL37 779863 sc-eQTL 7.31e-02 0.12 0.0668 0.611 CD8T L1
ENSG00000157216 SSBP3 550425 sc-eQTL 5.99e-01 0.0255 0.0483 0.611 CD8T L1
ENSG00000162402 USP24 -251460 sc-eQTL 8.49e-01 -0.00891 0.0467 0.611 CD8T L1
ENSG00000243725 TTC4 248043 sc-eQTL 7.04e-01 -0.0308 0.081 0.611 CD8T L1
ENSG00000116133 DHCR24 76709 sc-eQTL 1.83e-01 0.101 0.0753 0.622 DC L1
ENSG00000116205 TCEANC2 910320 sc-eQTL 4.05e-01 -0.0706 0.0846 0.622 DC L1
ENSG00000116209 TMEM59 910400 sc-eQTL 7.13e-01 0.0245 0.0666 0.622 DC L1
ENSG00000116221 MRPL37 779863 sc-eQTL 6.63e-01 -0.039 0.0894 0.622 DC L1
ENSG00000157216 SSBP3 550425 sc-eQTL 5.76e-01 0.0446 0.0797 0.622 DC L1
ENSG00000162390 ACOT11 421647 sc-eQTL 8.78e-01 -0.0118 0.0767 0.622 DC L1
ENSG00000162402 USP24 -251460 sc-eQTL 7.35e-01 -0.0157 0.0463 0.622 DC L1
ENSG00000215883 CYB5RL 763868 sc-eQTL 7.62e-01 -0.0254 0.0836 0.622 DC L1
ENSG00000243725 TTC4 248043 sc-eQTL 4.50e-01 0.0681 0.0899 0.622 DC L1
ENSG00000116133 DHCR24 76709 sc-eQTL 6.93e-01 -0.0212 0.0535 0.611 Mono L1
ENSG00000116205 TCEANC2 910320 sc-eQTL 1.73e-01 0.0785 0.0575 0.611 Mono L1
ENSG00000116209 TMEM59 910400 sc-eQTL 9.85e-01 0.000823 0.0429 0.611 Mono L1
ENSG00000116221 MRPL37 779863 sc-eQTL 9.88e-02 0.118 0.0713 0.611 Mono L1
ENSG00000157216 SSBP3 550425 sc-eQTL 2.77e-02 -0.18 0.0812 0.611 Mono L1
ENSG00000162402 USP24 -251460 sc-eQTL 5.59e-01 0.0286 0.0489 0.611 Mono L1
ENSG00000243725 TTC4 248043 sc-eQTL 2.78e-01 0.0935 0.086 0.611 Mono L1
ENSG00000006555 TTC22 162581 sc-eQTL 8.01e-01 0.0187 0.0741 0.609 NK L1
ENSG00000116133 DHCR24 76709 sc-eQTL 1.68e-02 0.178 0.0738 0.609 NK L1
ENSG00000116205 TCEANC2 910320 sc-eQTL 7.98e-01 -0.0189 0.0738 0.609 NK L1
ENSG00000116209 TMEM59 910400 sc-eQTL 7.33e-01 -0.0198 0.0578 0.609 NK L1
ENSG00000116221 MRPL37 779863 sc-eQTL 3.72e-01 0.0642 0.0718 0.609 NK L1
ENSG00000157216 SSBP3 550425 sc-eQTL 4.66e-01 -0.0455 0.0623 0.609 NK L1
ENSG00000162398 LEXM 157841 sc-eQTL 3.70e-01 0.0627 0.0698 0.609 NK L1
ENSG00000162402 USP24 -251460 sc-eQTL 5.45e-01 0.0257 0.0424 0.609 NK L1
ENSG00000243725 TTC4 248043 sc-eQTL 8.46e-01 0.0156 0.0802 0.609 NK L1
ENSG00000006555 TTC22 162581 sc-eQTL 6.06e-01 0.0338 0.0654 0.611 Other_T L1
ENSG00000116133 DHCR24 76709 sc-eQTL 1.28e-01 0.0772 0.0505 0.611 Other_T L1
ENSG00000116205 TCEANC2 910320 sc-eQTL 9.50e-01 -0.00473 0.076 0.611 Other_T L1
ENSG00000116209 TMEM59 910400 sc-eQTL 4.94e-01 -0.0357 0.0521 0.611 Other_T L1
ENSG00000116221 MRPL37 779863 sc-eQTL 3.56e-01 -0.0451 0.0488 0.611 Other_T L1
ENSG00000157216 SSBP3 550425 sc-eQTL 6.16e-01 0.0284 0.0565 0.611 Other_T L1
ENSG00000162402 USP24 -251460 sc-eQTL 8.65e-01 -0.0102 0.0602 0.611 Other_T L1
ENSG00000215883 CYB5RL 763868 sc-eQTL 2.35e-01 0.0977 0.082 0.611 Other_T L1
ENSG00000243725 TTC4 248043 sc-eQTL 9.92e-01 0.000837 0.082 0.611 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 162581 sc-eQTL 9.55e-01 -0.00388 0.0693 0.594 B_Activated L2
ENSG00000116133 DHCR24 76709 sc-eQTL 5.36e-01 0.0505 0.0813 0.594 B_Activated L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 3.03e-01 -0.09 0.0871 0.594 B_Activated L2
ENSG00000116209 TMEM59 910400 sc-eQTL 6.46e-01 -0.0426 0.0928 0.594 B_Activated L2
ENSG00000116221 MRPL37 779863 sc-eQTL 9.55e-02 -0.167 0.0995 0.594 B_Activated L2
ENSG00000157216 SSBP3 550425 sc-eQTL 9.06e-01 0.0107 0.0908 0.594 B_Activated L2
ENSG00000162402 USP24 -251460 sc-eQTL 3.47e-02 0.186 0.0875 0.594 B_Activated L2
ENSG00000215883 CYB5RL 763868 sc-eQTL 3.21e-01 -0.0777 0.078 0.594 B_Activated L2
ENSG00000243725 TTC4 248043 sc-eQTL 3.22e-01 -0.084 0.0846 0.594 B_Activated L2
ENSG00000006555 TTC22 162581 sc-eQTL 1.59e-01 -0.122 0.0866 0.609 B_Intermediate L2
ENSG00000116133 DHCR24 76709 sc-eQTL 9.89e-01 0.00113 0.0808 0.609 B_Intermediate L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 1.99e-01 -0.103 0.0801 0.609 B_Intermediate L2
ENSG00000116209 TMEM59 910400 sc-eQTL 5.87e-01 0.0374 0.0688 0.609 B_Intermediate L2
ENSG00000116221 MRPL37 779863 sc-eQTL 8.31e-01 -0.0173 0.081 0.609 B_Intermediate L2
ENSG00000157216 SSBP3 550425 sc-eQTL 4.80e-02 0.149 0.075 0.609 B_Intermediate L2
ENSG00000162402 USP24 -251460 sc-eQTL 1.21e-01 0.0986 0.0634 0.609 B_Intermediate L2
ENSG00000215883 CYB5RL 763868 sc-eQTL 2.15e-01 0.112 0.0899 0.609 B_Intermediate L2
ENSG00000243725 TTC4 248043 sc-eQTL 9.06e-01 -0.00965 0.082 0.609 B_Intermediate L2
ENSG00000006555 TTC22 162581 sc-eQTL 5.46e-01 -0.0507 0.0838 0.61 B_Memory L2
ENSG00000116133 DHCR24 76709 sc-eQTL 3.88e-01 0.0719 0.0831 0.61 B_Memory L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 4.02e-02 0.182 0.0882 0.61 B_Memory L2
ENSG00000116209 TMEM59 910400 sc-eQTL 2.18e-01 -0.0915 0.074 0.61 B_Memory L2
ENSG00000116221 MRPL37 779863 sc-eQTL 8.85e-01 0.0109 0.0752 0.61 B_Memory L2
ENSG00000157216 SSBP3 550425 sc-eQTL 9.64e-01 0.00317 0.0702 0.61 B_Memory L2
ENSG00000162402 USP24 -251460 sc-eQTL 6.76e-01 -0.0288 0.0686 0.61 B_Memory L2
ENSG00000215883 CYB5RL 763868 sc-eQTL 7.42e-01 0.0279 0.0849 0.61 B_Memory L2
ENSG00000243725 TTC4 248043 sc-eQTL 2.21e-01 0.108 0.0877 0.61 B_Memory L2
ENSG00000006555 TTC22 162581 sc-eQTL 5.13e-01 -0.0578 0.088 0.611 B_Naive1 L2
ENSG00000116133 DHCR24 76709 sc-eQTL 5.04e-01 0.0552 0.0826 0.611 B_Naive1 L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 1.16e-01 0.116 0.0733 0.611 B_Naive1 L2
ENSG00000116209 TMEM59 910400 sc-eQTL 5.71e-01 0.0304 0.0535 0.611 B_Naive1 L2
ENSG00000116221 MRPL37 779863 sc-eQTL 9.03e-02 0.133 0.0784 0.611 B_Naive1 L2
ENSG00000157216 SSBP3 550425 sc-eQTL 5.60e-01 -0.0438 0.0752 0.611 B_Naive1 L2
ENSG00000162402 USP24 -251460 sc-eQTL 5.03e-01 0.0397 0.0592 0.611 B_Naive1 L2
ENSG00000215883 CYB5RL 763868 sc-eQTL 3.45e-01 -0.0845 0.0892 0.611 B_Naive1 L2
ENSG00000243725 TTC4 248043 sc-eQTL 4.48e-01 0.0612 0.0806 0.611 B_Naive1 L2
ENSG00000006555 TTC22 162581 sc-eQTL 4.03e-01 0.0734 0.0876 0.612 B_Naive2 L2
ENSG00000116133 DHCR24 76709 sc-eQTL 5.44e-01 0.0464 0.0764 0.612 B_Naive2 L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 9.80e-01 -0.00209 0.0848 0.612 B_Naive2 L2
ENSG00000116209 TMEM59 910400 sc-eQTL 4.07e-01 -0.0579 0.0697 0.612 B_Naive2 L2
ENSG00000116221 MRPL37 779863 sc-eQTL 3.78e-01 0.0725 0.0821 0.612 B_Naive2 L2
ENSG00000157216 SSBP3 550425 sc-eQTL 3.11e-01 -0.082 0.0808 0.612 B_Naive2 L2
ENSG00000162402 USP24 -251460 sc-eQTL 6.90e-01 -0.0256 0.0642 0.612 B_Naive2 L2
ENSG00000215883 CYB5RL 763868 sc-eQTL 1.71e-01 -0.123 0.0899 0.612 B_Naive2 L2
ENSG00000243725 TTC4 248043 sc-eQTL 4.26e-01 0.0749 0.0939 0.612 B_Naive2 L2
ENSG00000006555 TTC22 162581 sc-eQTL 7.91e-01 0.0218 0.0823 0.614 CD4_CTL L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 4.37e-01 0.066 0.0846 0.614 CD4_CTL L2
ENSG00000116209 TMEM59 910400 sc-eQTL 4.79e-01 -0.0546 0.0769 0.614 CD4_CTL L2
ENSG00000116221 MRPL37 779863 sc-eQTL 9.82e-01 -0.00214 0.0948 0.614 CD4_CTL L2
ENSG00000157216 SSBP3 550425 sc-eQTL 8.73e-01 0.00936 0.0583 0.614 CD4_CTL L2
ENSG00000162402 USP24 -251460 sc-eQTL 2.32e-01 0.0957 0.0798 0.614 CD4_CTL L2
ENSG00000243725 TTC4 248043 sc-eQTL 5.28e-01 0.0565 0.0895 0.614 CD4_CTL L2
ENSG00000006555 TTC22 162581 sc-eQTL 1.86e-02 0.177 0.0745 0.611 CD4_Naive L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 9.74e-01 -0.00186 0.0574 0.611 CD4_Naive L2
ENSG00000116209 TMEM59 910400 sc-eQTL 9.55e-01 -0.00316 0.0558 0.611 CD4_Naive L2
ENSG00000116221 MRPL37 779863 sc-eQTL 1.49e-01 0.104 0.0716 0.611 CD4_Naive L2
ENSG00000157216 SSBP3 550425 sc-eQTL 8.76e-01 -0.00898 0.0574 0.611 CD4_Naive L2
ENSG00000162402 USP24 -251460 sc-eQTL 6.45e-01 0.0229 0.0495 0.611 CD4_Naive L2
ENSG00000243725 TTC4 248043 sc-eQTL 7.80e-01 0.0212 0.0755 0.611 CD4_Naive L2
ENSG00000006555 TTC22 162581 sc-eQTL 1.48e-01 0.115 0.0791 0.611 CD4_TCM L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 1.16e-01 -0.121 0.0769 0.611 CD4_TCM L2
ENSG00000116209 TMEM59 910400 sc-eQTL 8.07e-01 -0.0143 0.0583 0.611 CD4_TCM L2
ENSG00000116221 MRPL37 779863 sc-eQTL 7.20e-01 0.0263 0.0733 0.611 CD4_TCM L2
ENSG00000157216 SSBP3 550425 sc-eQTL 1.78e-01 0.0969 0.0716 0.611 CD4_TCM L2
ENSG00000162402 USP24 -251460 sc-eQTL 7.83e-01 0.0164 0.0596 0.611 CD4_TCM L2
ENSG00000243725 TTC4 248043 sc-eQTL 2.53e-02 0.191 0.0848 0.611 CD4_TCM L2
ENSG00000006555 TTC22 162581 sc-eQTL 9.23e-01 -0.00874 0.0906 0.611 CD4_TEM L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 5.89e-01 0.0465 0.0858 0.611 CD4_TEM L2
ENSG00000116209 TMEM59 910400 sc-eQTL 4.52e-01 -0.0501 0.0665 0.611 CD4_TEM L2
ENSG00000116221 MRPL37 779863 sc-eQTL 2.33e-01 0.102 0.0854 0.611 CD4_TEM L2
ENSG00000157216 SSBP3 550425 sc-eQTL 7.19e-02 0.132 0.0729 0.611 CD4_TEM L2
ENSG00000162402 USP24 -251460 sc-eQTL 1.46e-01 0.097 0.0665 0.611 CD4_TEM L2
ENSG00000243725 TTC4 248043 sc-eQTL 2.74e-01 0.0966 0.0881 0.611 CD4_TEM L2
ENSG00000006555 TTC22 162581 sc-eQTL 5.94e-01 -0.0388 0.0725 0.611 CD8_CTL L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 8.93e-02 0.136 0.0798 0.611 CD8_CTL L2
ENSG00000116209 TMEM59 910400 sc-eQTL 1.32e-01 -0.105 0.0695 0.611 CD8_CTL L2
ENSG00000116221 MRPL37 779863 sc-eQTL 6.24e-01 -0.0406 0.0827 0.611 CD8_CTL L2
ENSG00000157216 SSBP3 550425 sc-eQTL 4.19e-01 -0.0458 0.0565 0.611 CD8_CTL L2
ENSG00000162402 USP24 -251460 sc-eQTL 2.70e-01 0.0621 0.0561 0.611 CD8_CTL L2
ENSG00000243725 TTC4 248043 sc-eQTL 3.06e-04 -0.3 0.0817 0.611 CD8_CTL L2
ENSG00000006555 TTC22 162581 sc-eQTL 5.33e-01 0.0506 0.081 0.611 CD8_Naive L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 1.39e-01 -0.108 0.073 0.611 CD8_Naive L2
ENSG00000116209 TMEM59 910400 sc-eQTL 4.63e-01 -0.0527 0.0716 0.611 CD8_Naive L2
ENSG00000116221 MRPL37 779863 sc-eQTL 2.47e-04 0.311 0.0834 0.611 CD8_Naive L2
ENSG00000157216 SSBP3 550425 sc-eQTL 9.65e-01 0.00284 0.0651 0.611 CD8_Naive L2
ENSG00000162402 USP24 -251460 sc-eQTL 5.16e-01 -0.0385 0.0592 0.611 CD8_Naive L2
ENSG00000243725 TTC4 248043 sc-eQTL 7.73e-02 0.153 0.086 0.611 CD8_Naive L2
ENSG00000006555 TTC22 162581 sc-eQTL 2.62e-01 0.098 0.0871 0.623 CD8_TCM L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 5.57e-01 0.0517 0.0878 0.623 CD8_TCM L2
ENSG00000116209 TMEM59 910400 sc-eQTL 3.77e-01 -0.0684 0.0772 0.623 CD8_TCM L2
ENSG00000116221 MRPL37 779863 sc-eQTL 4.69e-01 -0.0635 0.0876 0.623 CD8_TCM L2
ENSG00000157216 SSBP3 550425 sc-eQTL 7.03e-01 -0.029 0.0761 0.623 CD8_TCM L2
ENSG00000162402 USP24 -251460 sc-eQTL 6.77e-01 0.0308 0.0738 0.623 CD8_TCM L2
ENSG00000243725 TTC4 248043 sc-eQTL 1.76e-02 0.212 0.0884 0.623 CD8_TCM L2
ENSG00000006555 TTC22 162581 sc-eQTL 9.12e-01 -0.00949 0.0859 0.603 CD8_TEM L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 3.94e-01 -0.0764 0.0895 0.603 CD8_TEM L2
ENSG00000116209 TMEM59 910400 sc-eQTL 8.06e-01 -0.0214 0.0867 0.603 CD8_TEM L2
ENSG00000116221 MRPL37 779863 sc-eQTL 6.10e-01 0.0449 0.0878 0.603 CD8_TEM L2
ENSG00000157216 SSBP3 550425 sc-eQTL 4.35e-01 0.0649 0.083 0.603 CD8_TEM L2
ENSG00000162402 USP24 -251460 sc-eQTL 2.55e-01 -0.0996 0.0873 0.603 CD8_TEM L2
ENSG00000243725 TTC4 248043 sc-eQTL 4.12e-01 0.073 0.0889 0.603 CD8_TEM L2
ENSG00000006555 TTC22 162581 sc-eQTL 8.02e-02 0.14 0.0799 0.615 MAIT L2
ENSG00000116133 DHCR24 76709 sc-eQTL 8.09e-01 0.0144 0.0596 0.615 MAIT L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 6.64e-01 0.0364 0.0838 0.615 MAIT L2
ENSG00000116209 TMEM59 910400 sc-eQTL 6.55e-02 -0.139 0.0751 0.615 MAIT L2
ENSG00000116221 MRPL37 779863 sc-eQTL 4.00e-01 -0.0775 0.0919 0.615 MAIT L2
ENSG00000157216 SSBP3 550425 sc-eQTL 7.85e-01 -0.0222 0.0816 0.615 MAIT L2
ENSG00000162402 USP24 -251460 sc-eQTL 8.73e-01 0.0116 0.0725 0.615 MAIT L2
ENSG00000215883 CYB5RL 763868 sc-eQTL 6.18e-01 0.042 0.0842 0.615 MAIT L2
ENSG00000243725 TTC4 248043 sc-eQTL 4.15e-01 -0.0683 0.0836 0.615 MAIT L2
ENSG00000006555 TTC22 162581 sc-eQTL 9.70e-01 0.00341 0.0898 0.609 NK_CD56bright L2
ENSG00000116133 DHCR24 76709 sc-eQTL 1.74e-01 0.108 0.079 0.609 NK_CD56bright L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 2.14e-01 0.104 0.0835 0.609 NK_CD56bright L2
ENSG00000116209 TMEM59 910400 sc-eQTL 4.76e-01 0.0583 0.0817 0.609 NK_CD56bright L2
ENSG00000116221 MRPL37 779863 sc-eQTL 8.13e-01 -0.0216 0.0914 0.609 NK_CD56bright L2
ENSG00000157216 SSBP3 550425 sc-eQTL 3.48e-02 -0.145 0.0681 0.609 NK_CD56bright L2
ENSG00000162398 LEXM 157841 sc-eQTL 6.27e-01 0.0395 0.0813 0.609 NK_CD56bright L2
ENSG00000162402 USP24 -251460 sc-eQTL 9.18e-01 0.00723 0.07 0.609 NK_CD56bright L2
ENSG00000243725 TTC4 248043 sc-eQTL 7.27e-01 -0.0308 0.0882 0.609 NK_CD56bright L2
ENSG00000006555 TTC22 162581 sc-eQTL 4.24e-01 -0.0602 0.0751 0.608 NK_CD56dim L2
ENSG00000116133 DHCR24 76709 sc-eQTL 4.62e-03 0.221 0.077 0.608 NK_CD56dim L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 9.97e-01 0.000318 0.085 0.608 NK_CD56dim L2
ENSG00000116209 TMEM59 910400 sc-eQTL 7.18e-01 0.0228 0.063 0.608 NK_CD56dim L2
ENSG00000116221 MRPL37 779863 sc-eQTL 4.32e-01 0.0645 0.0819 0.608 NK_CD56dim L2
ENSG00000157216 SSBP3 550425 sc-eQTL 3.10e-01 -0.0681 0.067 0.608 NK_CD56dim L2
ENSG00000162398 LEXM 157841 sc-eQTL 9.15e-01 -0.00824 0.0772 0.608 NK_CD56dim L2
ENSG00000162402 USP24 -251460 sc-eQTL 3.06e-01 -0.0502 0.0489 0.608 NK_CD56dim L2
ENSG00000243725 TTC4 248043 sc-eQTL 3.08e-01 0.0856 0.0838 0.608 NK_CD56dim L2
ENSG00000006555 TTC22 162581 sc-eQTL 4.31e-02 0.181 0.0891 0.605 NK_HLA L2
ENSG00000116133 DHCR24 76709 sc-eQTL 6.22e-01 0.0433 0.0877 0.605 NK_HLA L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 4.57e-01 -0.063 0.0845 0.605 NK_HLA L2
ENSG00000116209 TMEM59 910400 sc-eQTL 8.62e-01 0.0146 0.0841 0.605 NK_HLA L2
ENSG00000116221 MRPL37 779863 sc-eQTL 1.55e-01 0.132 0.0922 0.605 NK_HLA L2
ENSG00000157216 SSBP3 550425 sc-eQTL 5.98e-01 0.0399 0.0756 0.605 NK_HLA L2
ENSG00000162398 LEXM 157841 sc-eQTL 2.51e-02 0.19 0.0842 0.605 NK_HLA L2
ENSG00000162402 USP24 -251460 sc-eQTL 5.61e-01 -0.0364 0.0625 0.605 NK_HLA L2
ENSG00000243725 TTC4 248043 sc-eQTL 9.75e-02 -0.155 0.0928 0.605 NK_HLA L2
ENSG00000006555 TTC22 162581 sc-eQTL 9.96e-01 0.000395 0.0799 0.608 NK_cytokine L2
ENSG00000116133 DHCR24 76709 sc-eQTL 2.13e-01 0.101 0.0805 0.608 NK_cytokine L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 2.39e-01 -0.0945 0.08 0.608 NK_cytokine L2
ENSG00000116209 TMEM59 910400 sc-eQTL 4.25e-01 -0.052 0.0651 0.608 NK_cytokine L2
ENSG00000116221 MRPL37 779863 sc-eQTL 4.65e-01 0.0588 0.0803 0.608 NK_cytokine L2
ENSG00000157216 SSBP3 550425 sc-eQTL 9.56e-01 0.00376 0.0674 0.608 NK_cytokine L2
ENSG00000162398 LEXM 157841 sc-eQTL 1.36e-01 0.125 0.0838 0.608 NK_cytokine L2
ENSG00000162402 USP24 -251460 sc-eQTL 4.80e-02 0.113 0.0569 0.608 NK_cytokine L2
ENSG00000243725 TTC4 248043 sc-eQTL 7.44e-01 -0.0279 0.0851 0.608 NK_cytokine L2
ENSG00000006555 TTC22 162581 sc-eQTL 8.81e-01 -0.0147 0.0984 0.581 PB L2
ENSG00000116133 DHCR24 76709 sc-eQTL 9.44e-02 -0.145 0.0861 0.581 PB L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 6.79e-01 -0.0441 0.106 0.581 PB L2
ENSG00000116209 TMEM59 910400 sc-eQTL 9.76e-02 -0.0732 0.0438 0.581 PB L2
ENSG00000116221 MRPL37 779863 sc-eQTL 1.11e-01 0.128 0.0797 0.581 PB L2
ENSG00000157216 SSBP3 550425 sc-eQTL 3.89e-01 0.0804 0.0928 0.581 PB L2
ENSG00000162402 USP24 -251460 sc-eQTL 6.91e-01 -0.0421 0.106 0.581 PB L2
ENSG00000215883 CYB5RL 763868 sc-eQTL 6.46e-02 -0.202 0.108 0.581 PB L2
ENSG00000243725 TTC4 248043 sc-eQTL 8.49e-01 -0.0196 0.102 0.581 PB L2
ENSG00000006555 TTC22 162581 sc-eQTL 1.53e-01 -0.115 0.08 0.611 Pro_T L2
ENSG00000116133 DHCR24 76709 sc-eQTL 3.69e-01 0.0615 0.0682 0.611 Pro_T L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 8.70e-02 -0.143 0.0829 0.611 Pro_T L2
ENSG00000116209 TMEM59 910400 sc-eQTL 5.97e-01 0.0306 0.0579 0.611 Pro_T L2
ENSG00000116221 MRPL37 779863 sc-eQTL 1.39e-01 -0.0839 0.0564 0.611 Pro_T L2
ENSG00000157216 SSBP3 550425 sc-eQTL 4.61e-01 -0.0469 0.0635 0.611 Pro_T L2
ENSG00000162402 USP24 -251460 sc-eQTL 8.49e-01 -0.0147 0.0776 0.611 Pro_T L2
ENSG00000215883 CYB5RL 763868 sc-eQTL 5.55e-01 0.0452 0.0765 0.611 Pro_T L2
ENSG00000243725 TTC4 248043 sc-eQTL 1.31e-02 0.21 0.0839 0.611 Pro_T L2
ENSG00000006555 TTC22 162581 sc-eQTL 1.66e-01 0.111 0.0795 0.611 Treg L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 9.08e-01 0.00985 0.0855 0.611 Treg L2
ENSG00000116209 TMEM59 910400 sc-eQTL 6.48e-01 -0.0309 0.0676 0.611 Treg L2
ENSG00000116221 MRPL37 779863 sc-eQTL 6.78e-01 0.0348 0.0836 0.611 Treg L2
ENSG00000157216 SSBP3 550425 sc-eQTL 6.05e-01 -0.0386 0.0746 0.611 Treg L2
ENSG00000162402 USP24 -251460 sc-eQTL 1.93e-01 0.0925 0.0708 0.611 Treg L2
ENSG00000243725 TTC4 248043 sc-eQTL 6.20e-01 0.0444 0.0895 0.611 Treg L2
ENSG00000116133 DHCR24 76709 sc-eQTL 3.04e-02 0.16 0.0733 0.612 cDC L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 9.96e-01 -0.000494 0.0875 0.612 cDC L2
ENSG00000116209 TMEM59 910400 sc-eQTL 6.24e-01 -0.0365 0.0743 0.612 cDC L2
ENSG00000116221 MRPL37 779863 sc-eQTL 3.66e-01 -0.0861 0.0949 0.612 cDC L2
ENSG00000157216 SSBP3 550425 sc-eQTL 7.00e-01 -0.0338 0.0877 0.612 cDC L2
ENSG00000162390 ACOT11 421647 sc-eQTL 6.84e-01 -0.0332 0.0815 0.612 cDC L2
ENSG00000162402 USP24 -251460 sc-eQTL 5.45e-01 -0.0554 0.0913 0.612 cDC L2
ENSG00000215883 CYB5RL 763868 sc-eQTL 9.57e-01 -0.00421 0.0785 0.612 cDC L2
ENSG00000243725 TTC4 248043 sc-eQTL 9.03e-01 0.0114 0.0938 0.612 cDC L2
ENSG00000116133 DHCR24 76709 sc-eQTL 8.89e-01 -0.00718 0.0513 0.611 cMono_IL1B L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 4.17e-02 0.145 0.0706 0.611 cMono_IL1B L2
ENSG00000116209 TMEM59 910400 sc-eQTL 4.15e-01 0.0353 0.0432 0.611 cMono_IL1B L2
ENSG00000116221 MRPL37 779863 sc-eQTL 5.02e-01 0.0517 0.0769 0.611 cMono_IL1B L2
ENSG00000157216 SSBP3 550425 sc-eQTL 3.45e-02 -0.165 0.0778 0.611 cMono_IL1B L2
ENSG00000162402 USP24 -251460 sc-eQTL 6.42e-01 -0.027 0.058 0.611 cMono_IL1B L2
ENSG00000243725 TTC4 248043 sc-eQTL 3.82e-01 0.0777 0.0886 0.611 cMono_IL1B L2
ENSG00000116133 DHCR24 76709 sc-eQTL 5.94e-01 -0.0257 0.0482 0.611 cMono_S100A L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 5.94e-01 0.0392 0.0736 0.611 cMono_S100A L2
ENSG00000116209 TMEM59 910400 sc-eQTL 5.82e-01 -0.0324 0.0589 0.611 cMono_S100A L2
ENSG00000116221 MRPL37 779863 sc-eQTL 7.55e-02 0.151 0.0845 0.611 cMono_S100A L2
ENSG00000157216 SSBP3 550425 sc-eQTL 6.83e-01 -0.0361 0.0883 0.611 cMono_S100A L2
ENSG00000162402 USP24 -251460 sc-eQTL 3.61e-03 0.206 0.0701 0.611 cMono_S100A L2
ENSG00000243725 TTC4 248043 sc-eQTL 7.77e-01 -0.0254 0.0896 0.611 cMono_S100A L2
ENSG00000006555 TTC22 162581 sc-eQTL 6.27e-01 -0.0419 0.086 0.606 gdT L2
ENSG00000116133 DHCR24 76709 sc-eQTL 5.46e-01 0.058 0.0958 0.606 gdT L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 7.62e-01 -0.0292 0.0963 0.606 gdT L2
ENSG00000116209 TMEM59 910400 sc-eQTL 3.30e-01 0.0953 0.0974 0.606 gdT L2
ENSG00000116221 MRPL37 779863 sc-eQTL 1.69e-01 0.154 0.111 0.606 gdT L2
ENSG00000157216 SSBP3 550425 sc-eQTL 8.46e-01 0.0134 0.0686 0.606 gdT L2
ENSG00000162402 USP24 -251460 sc-eQTL 6.41e-01 -0.043 0.0921 0.606 gdT L2
ENSG00000215883 CYB5RL 763868 sc-eQTL 6.86e-02 -0.174 0.0947 0.606 gdT L2
ENSG00000243725 TTC4 248043 sc-eQTL 9.58e-01 0.00568 0.108 0.606 gdT L2
ENSG00000116133 DHCR24 76709 sc-eQTL 5.61e-02 0.125 0.0649 0.607 intMono L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 7.27e-01 0.0285 0.0815 0.607 intMono L2
ENSG00000116209 TMEM59 910400 sc-eQTL 9.66e-01 0.00254 0.0599 0.607 intMono L2
ENSG00000116221 MRPL37 779863 sc-eQTL 5.82e-01 0.0504 0.0916 0.607 intMono L2
ENSG00000157216 SSBP3 550425 sc-eQTL 3.78e-02 -0.194 0.0926 0.607 intMono L2
ENSG00000162402 USP24 -251460 sc-eQTL 7.24e-01 -0.0295 0.0834 0.607 intMono L2
ENSG00000243725 TTC4 248043 sc-eQTL 9.08e-01 -0.0102 0.0889 0.607 intMono L2
ENSG00000116133 DHCR24 76709 sc-eQTL 1.21e-01 0.101 0.0647 0.609 ncMono L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 5.84e-01 -0.0446 0.0813 0.609 ncMono L2
ENSG00000116209 TMEM59 910400 sc-eQTL 8.25e-01 -0.0144 0.0651 0.609 ncMono L2
ENSG00000116221 MRPL37 779863 sc-eQTL 7.63e-01 0.0254 0.084 0.609 ncMono L2
ENSG00000157216 SSBP3 550425 sc-eQTL 2.79e-01 -0.0994 0.0916 0.609 ncMono L2
ENSG00000162402 USP24 -251460 sc-eQTL 5.24e-01 -0.0468 0.0733 0.609 ncMono L2
ENSG00000243725 TTC4 248043 sc-eQTL 3.81e-01 0.0761 0.0867 0.609 ncMono L2
ENSG00000116133 DHCR24 76709 sc-eQTL 5.27e-01 -0.0505 0.0797 0.624 pDC L2
ENSG00000116205 TCEANC2 910320 sc-eQTL 3.62e-01 -0.0874 0.0955 0.624 pDC L2
ENSG00000116209 TMEM59 910400 sc-eQTL 1.88e-01 0.1 0.076 0.624 pDC L2
ENSG00000116221 MRPL37 779863 sc-eQTL 8.99e-01 -0.0129 0.102 0.624 pDC L2
ENSG00000157216 SSBP3 550425 sc-eQTL 4.53e-01 0.0678 0.09 0.624 pDC L2
ENSG00000162390 ACOT11 421647 sc-eQTL 9.70e-01 -0.00143 0.0379 0.624 pDC L2
ENSG00000162402 USP24 -251460 sc-eQTL 8.73e-01 0.0103 0.064 0.624 pDC L2
ENSG00000215883 CYB5RL 763868 sc-eQTL 3.24e-01 0.0863 0.0873 0.624 pDC L2
ENSG00000243725 TTC4 248043 sc-eQTL 7.06e-01 0.0382 0.101 0.624 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 162581 sc-eQTL 2.16e-01 -0.103 0.0833 0.611 B_Memory LOneK1K
ENSG00000116133 DHCR24 76709 sc-eQTL 3.90e-01 0.0722 0.0838 0.611 B_Memory LOneK1K
ENSG00000116205 TCEANC2 910320 sc-eQTL 8.37e-01 0.0167 0.0811 0.611 B_Memory LOneK1K
ENSG00000116209 TMEM59 910400 sc-eQTL 6.48e-01 -0.0289 0.0631 0.611 B_Memory LOneK1K
ENSG00000116221 MRPL37 779863 sc-eQTL 5.68e-01 -0.0431 0.0755 0.611 B_Memory LOneK1K
ENSG00000157216 SSBP3 550425 sc-eQTL 1.44e-01 0.0959 0.0654 0.611 B_Memory LOneK1K
ENSG00000162402 USP24 -251460 sc-eQTL 6.19e-02 0.112 0.0595 0.611 B_Memory LOneK1K
ENSG00000215883 CYB5RL 763868 sc-eQTL 4.93e-01 0.0632 0.092 0.611 B_Memory LOneK1K
ENSG00000243725 TTC4 248043 sc-eQTL 5.59e-01 -0.0484 0.0826 0.611 B_Memory LOneK1K
ENSG00000006555 TTC22 162581 sc-eQTL 9.33e-01 0.00746 0.0884 0.611 B_Naive LOneK1K
ENSG00000116133 DHCR24 76709 sc-eQTL 3.14e-01 0.0801 0.0794 0.611 B_Naive LOneK1K
ENSG00000116205 TCEANC2 910320 sc-eQTL 1.57e-01 0.102 0.0716 0.611 B_Naive LOneK1K
ENSG00000116209 TMEM59 910400 sc-eQTL 9.22e-01 -0.00502 0.0511 0.611 B_Naive LOneK1K
ENSG00000116221 MRPL37 779863 sc-eQTL 1.19e-01 0.114 0.073 0.611 B_Naive LOneK1K
ENSG00000157216 SSBP3 550425 sc-eQTL 9.63e-02 -0.109 0.0653 0.611 B_Naive LOneK1K
ENSG00000162402 USP24 -251460 sc-eQTL 9.80e-01 0.00139 0.0564 0.611 B_Naive LOneK1K
ENSG00000215883 CYB5RL 763868 sc-eQTL 1.34e-02 -0.219 0.088 0.611 B_Naive LOneK1K
ENSG00000243725 TTC4 248043 sc-eQTL 4.94e-01 0.0574 0.0839 0.611 B_Naive LOneK1K
ENSG00000116133 DHCR24 76709 sc-eQTL 4.27e-01 -0.0401 0.0503 0.611 CD14_Mono LOneK1K
ENSG00000116205 TCEANC2 910320 sc-eQTL 1.56e-01 0.0893 0.0627 0.611 CD14_Mono LOneK1K
ENSG00000116209 TMEM59 910400 sc-eQTL 8.73e-01 0.00697 0.0435 0.611 CD14_Mono LOneK1K
ENSG00000116221 MRPL37 779863 sc-eQTL 1.05e-01 0.125 0.0765 0.611 CD14_Mono LOneK1K
ENSG00000157216 SSBP3 550425 sc-eQTL 3.90e-02 -0.166 0.0798 0.611 CD14_Mono LOneK1K
ENSG00000162402 USP24 -251460 sc-eQTL 4.58e-01 0.0409 0.055 0.611 CD14_Mono LOneK1K
ENSG00000243725 TTC4 248043 sc-eQTL 4.68e-01 0.0663 0.0912 0.611 CD14_Mono LOneK1K
ENSG00000116133 DHCR24 76709 sc-eQTL 2.25e-01 0.0745 0.0612 0.608 CD16_Mono LOneK1K
ENSG00000116205 TCEANC2 910320 sc-eQTL 7.12e-01 -0.0298 0.0807 0.608 CD16_Mono LOneK1K
ENSG00000116209 TMEM59 910400 sc-eQTL 9.49e-01 0.00382 0.06 0.608 CD16_Mono LOneK1K
ENSG00000116221 MRPL37 779863 sc-eQTL 5.26e-01 0.0521 0.0821 0.608 CD16_Mono LOneK1K
ENSG00000157216 SSBP3 550425 sc-eQTL 5.29e-02 -0.169 0.0869 0.608 CD16_Mono LOneK1K
ENSG00000162402 USP24 -251460 sc-eQTL 5.83e-01 -0.038 0.0691 0.608 CD16_Mono LOneK1K
ENSG00000243725 TTC4 248043 sc-eQTL 6.35e-01 0.0412 0.0866 0.608 CD16_Mono LOneK1K
ENSG00000006555 TTC22 162581 sc-eQTL 9.36e-01 0.00584 0.0731 0.608 NK_CD56dim LOneK1K
ENSG00000116133 DHCR24 76709 sc-eQTL 2.12e-02 0.175 0.0754 0.608 NK_CD56dim LOneK1K
ENSG00000116205 TCEANC2 910320 sc-eQTL 4.87e-01 -0.052 0.0748 0.608 NK_CD56dim LOneK1K
ENSG00000116209 TMEM59 910400 sc-eQTL 7.19e-01 -0.0209 0.0579 0.608 NK_CD56dim LOneK1K
ENSG00000116221 MRPL37 779863 sc-eQTL 1.90e-01 0.102 0.0773 0.608 NK_CD56dim LOneK1K
ENSG00000157216 SSBP3 550425 sc-eQTL 4.97e-01 -0.0433 0.0636 0.608 NK_CD56dim LOneK1K
ENSG00000162398 LEXM 157841 sc-eQTL 3.10e-01 0.0729 0.0716 0.608 NK_CD56dim LOneK1K
ENSG00000162402 USP24 -251460 sc-eQTL 5.87e-01 0.0247 0.0455 0.608 NK_CD56dim LOneK1K
ENSG00000243725 TTC4 248043 sc-eQTL 6.76e-01 0.0339 0.081 0.608 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000006555 TTC22 162581 eQTL 0.00377 0.0427 0.0147 0.0 0.0 0.402

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000234810 \N -365384 1.04e-06 6.99e-07 1.48e-07 4.37e-07 9.33e-08 3.24e-07 6.09e-07 1.42e-07 5.02e-07 2.81e-07 9e-07 4.21e-07 1.02e-06 1.57e-07 3e-07 2.83e-07 5.06e-07 4.33e-07 2.57e-07 1.9e-07 2.52e-07 4.66e-07 4.01e-07 2.49e-07 1.28e-06 2.49e-07 3.37e-07 2.59e-07 4.63e-07 8.48e-07 3.66e-07 6.84e-08 4.57e-08 1.77e-07 3.7e-07 1.52e-07 1.23e-07 1.06e-07 8.52e-08 8.66e-09 9.84e-08 8.45e-07 4.65e-08 5.64e-09 1.81e-07 1.44e-08 1.18e-07 1.24e-08 6.14e-08