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Genes within 1Mb (chr1:54961164:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 159841 sc-eQTL 7.56e-01 -0.0297 0.0955 0.737 B L1
ENSG00000116133 DHCR24 73969 sc-eQTL 5.31e-01 0.0566 0.0902 0.737 B L1
ENSG00000116205 TCEANC2 907580 sc-eQTL 8.67e-02 0.133 0.0774 0.737 B L1
ENSG00000116209 TMEM59 907660 sc-eQTL 3.89e-01 -0.0409 0.0474 0.737 B L1
ENSG00000116221 MRPL37 777123 sc-eQTL 7.83e-01 -0.0171 0.0621 0.737 B L1
ENSG00000157216 SSBP3 547685 sc-eQTL 6.74e-01 0.0274 0.065 0.737 B L1
ENSG00000162402 USP24 -254200 sc-eQTL 2.29e-01 0.0663 0.0549 0.737 B L1
ENSG00000215883 CYB5RL 761128 sc-eQTL 9.07e-02 -0.179 0.105 0.737 B L1
ENSG00000243725 TTC4 245303 sc-eQTL 8.92e-01 0.0125 0.0923 0.737 B L1
ENSG00000006555 TTC22 159841 sc-eQTL 2.74e-02 0.163 0.0733 0.737 CD4T L1
ENSG00000116205 TCEANC2 907580 sc-eQTL 2.25e-01 -0.0735 0.0604 0.737 CD4T L1
ENSG00000116209 TMEM59 907660 sc-eQTL 3.06e-01 0.0578 0.0563 0.737 CD4T L1
ENSG00000116221 MRPL37 777123 sc-eQTL 4.49e-01 -0.0592 0.0779 0.737 CD4T L1
ENSG00000157216 SSBP3 547685 sc-eQTL 9.92e-02 0.107 0.0644 0.737 CD4T L1
ENSG00000162402 USP24 -254200 sc-eQTL 2.26e-01 0.0638 0.0526 0.737 CD4T L1
ENSG00000243725 TTC4 245303 sc-eQTL 2.46e-02 0.178 0.0785 0.737 CD4T L1
ENSG00000006555 TTC22 159841 sc-eQTL 3.07e-01 0.0663 0.0648 0.737 CD8T L1
ENSG00000116205 TCEANC2 907580 sc-eQTL 8.33e-01 -0.0171 0.0809 0.737 CD8T L1
ENSG00000116209 TMEM59 907660 sc-eQTL 6.36e-01 0.0266 0.0562 0.737 CD8T L1
ENSG00000116221 MRPL37 777123 sc-eQTL 4.76e-01 0.0551 0.0772 0.737 CD8T L1
ENSG00000157216 SSBP3 547685 sc-eQTL 8.00e-01 0.0141 0.0556 0.737 CD8T L1
ENSG00000162402 USP24 -254200 sc-eQTL 9.50e-01 0.00338 0.0537 0.737 CD8T L1
ENSG00000243725 TTC4 245303 sc-eQTL 5.57e-01 0.0548 0.0931 0.737 CD8T L1
ENSG00000116133 DHCR24 73969 sc-eQTL 1.42e-01 0.126 0.0857 0.741 DC L1
ENSG00000116205 TCEANC2 907580 sc-eQTL 7.65e-01 -0.0289 0.0966 0.741 DC L1
ENSG00000116209 TMEM59 907660 sc-eQTL 7.36e-01 -0.0257 0.0759 0.741 DC L1
ENSG00000116221 MRPL37 777123 sc-eQTL 5.87e-01 -0.0555 0.102 0.741 DC L1
ENSG00000157216 SSBP3 547685 sc-eQTL 2.96e-01 0.095 0.0907 0.741 DC L1
ENSG00000162390 ACOT11 418907 sc-eQTL 6.41e-01 -0.0408 0.0874 0.741 DC L1
ENSG00000162402 USP24 -254200 sc-eQTL 4.90e-01 0.0364 0.0527 0.741 DC L1
ENSG00000215883 CYB5RL 761128 sc-eQTL 9.61e-02 -0.158 0.0947 0.741 DC L1
ENSG00000243725 TTC4 245303 sc-eQTL 2.85e-01 0.11 0.102 0.741 DC L1
ENSG00000116133 DHCR24 73969 sc-eQTL 6.57e-01 0.0278 0.0625 0.737 Mono L1
ENSG00000116205 TCEANC2 907580 sc-eQTL 5.92e-01 0.0362 0.0674 0.737 Mono L1
ENSG00000116209 TMEM59 907660 sc-eQTL 5.86e-01 -0.0273 0.0501 0.737 Mono L1
ENSG00000116221 MRPL37 777123 sc-eQTL 1.06e-01 0.135 0.0833 0.737 Mono L1
ENSG00000157216 SSBP3 547685 sc-eQTL 1.77e-03 -0.297 0.0938 0.737 Mono L1
ENSG00000162402 USP24 -254200 sc-eQTL 9.41e-01 -0.00421 0.0572 0.737 Mono L1
ENSG00000243725 TTC4 245303 sc-eQTL 3.10e-01 0.102 0.101 0.737 Mono L1
ENSG00000006555 TTC22 159841 sc-eQTL 8.14e-01 0.0201 0.0854 0.736 NK L1
ENSG00000116133 DHCR24 73969 sc-eQTL 1.04e-02 0.219 0.0848 0.736 NK L1
ENSG00000116205 TCEANC2 907580 sc-eQTL 4.47e-01 0.0647 0.0849 0.736 NK L1
ENSG00000116209 TMEM59 907660 sc-eQTL 2.85e-01 0.0712 0.0664 0.736 NK L1
ENSG00000116221 MRPL37 777123 sc-eQTL 3.87e-01 0.0717 0.0826 0.736 NK L1
ENSG00000157216 SSBP3 547685 sc-eQTL 3.70e-02 -0.149 0.0711 0.736 NK L1
ENSG00000162398 LEXM 155101 sc-eQTL 9.77e-01 -0.00234 0.0806 0.736 NK L1
ENSG00000162402 USP24 -254200 sc-eQTL 5.07e-01 0.0324 0.0488 0.736 NK L1
ENSG00000243725 TTC4 245303 sc-eQTL 6.95e-01 0.0362 0.0924 0.736 NK L1
ENSG00000006555 TTC22 159841 sc-eQTL 4.78e-01 0.0536 0.0753 0.737 Other_T L1
ENSG00000116133 DHCR24 73969 sc-eQTL 6.74e-01 -0.0246 0.0584 0.737 Other_T L1
ENSG00000116205 TCEANC2 907580 sc-eQTL 7.88e-01 0.0235 0.0875 0.737 Other_T L1
ENSG00000116209 TMEM59 907660 sc-eQTL 9.11e-01 -0.00671 0.06 0.737 Other_T L1
ENSG00000116221 MRPL37 777123 sc-eQTL 2.44e-01 -0.0655 0.0561 0.737 Other_T L1
ENSG00000157216 SSBP3 547685 sc-eQTL 8.53e-01 -0.012 0.0651 0.737 Other_T L1
ENSG00000162402 USP24 -254200 sc-eQTL 4.81e-01 -0.0489 0.0692 0.737 Other_T L1
ENSG00000215883 CYB5RL 761128 sc-eQTL 3.38e-01 0.0907 0.0945 0.737 Other_T L1
ENSG00000243725 TTC4 245303 sc-eQTL 6.97e-01 0.0367 0.0943 0.737 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 159841 sc-eQTL 5.70e-01 -0.0459 0.0806 0.727 B_Activated L2
ENSG00000116133 DHCR24 73969 sc-eQTL 3.58e-01 0.0871 0.0946 0.727 B_Activated L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 5.92e-01 -0.0546 0.102 0.727 B_Activated L2
ENSG00000116209 TMEM59 907660 sc-eQTL 7.47e-01 -0.035 0.108 0.727 B_Activated L2
ENSG00000116221 MRPL37 777123 sc-eQTL 3.53e-01 -0.108 0.117 0.727 B_Activated L2
ENSG00000157216 SSBP3 547685 sc-eQTL 4.98e-01 -0.0717 0.106 0.727 B_Activated L2
ENSG00000162402 USP24 -254200 sc-eQTL 4.44e-02 0.207 0.102 0.727 B_Activated L2
ENSG00000215883 CYB5RL 761128 sc-eQTL 5.06e-01 -0.0606 0.091 0.727 B_Activated L2
ENSG00000243725 TTC4 245303 sc-eQTL 3.93e-01 -0.0844 0.0986 0.727 B_Activated L2
ENSG00000006555 TTC22 159841 sc-eQTL 3.13e-01 -0.102 0.101 0.736 B_Intermediate L2
ENSG00000116133 DHCR24 73969 sc-eQTL 4.53e-01 0.0705 0.0937 0.736 B_Intermediate L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 6.79e-01 -0.0387 0.0935 0.736 B_Intermediate L2
ENSG00000116209 TMEM59 907660 sc-eQTL 2.96e-01 -0.0836 0.0798 0.736 B_Intermediate L2
ENSG00000116221 MRPL37 777123 sc-eQTL 1.35e-01 -0.14 0.0936 0.736 B_Intermediate L2
ENSG00000157216 SSBP3 547685 sc-eQTL 1.91e-01 0.115 0.0876 0.736 B_Intermediate L2
ENSG00000162402 USP24 -254200 sc-eQTL 5.27e-01 0.0469 0.074 0.736 B_Intermediate L2
ENSG00000215883 CYB5RL 761128 sc-eQTL 5.20e-01 0.0675 0.105 0.736 B_Intermediate L2
ENSG00000243725 TTC4 245303 sc-eQTL 9.52e-01 -0.00571 0.0953 0.736 B_Intermediate L2
ENSG00000006555 TTC22 159841 sc-eQTL 8.06e-01 -0.0239 0.0974 0.737 B_Memory L2
ENSG00000116133 DHCR24 73969 sc-eQTL 9.02e-01 -0.0119 0.0967 0.737 B_Memory L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 3.28e-02 0.22 0.102 0.737 B_Memory L2
ENSG00000116209 TMEM59 907660 sc-eQTL 1.96e-01 -0.111 0.0859 0.737 B_Memory L2
ENSG00000116221 MRPL37 777123 sc-eQTL 4.11e-01 -0.0718 0.0872 0.737 B_Memory L2
ENSG00000157216 SSBP3 547685 sc-eQTL 7.45e-01 -0.0266 0.0815 0.737 B_Memory L2
ENSG00000162402 USP24 -254200 sc-eQTL 6.35e-01 0.0379 0.0797 0.737 B_Memory L2
ENSG00000215883 CYB5RL 761128 sc-eQTL 9.05e-01 0.0118 0.0986 0.737 B_Memory L2
ENSG00000243725 TTC4 245303 sc-eQTL 5.28e-01 -0.0645 0.102 0.737 B_Memory L2
ENSG00000006555 TTC22 159841 sc-eQTL 4.60e-01 -0.0759 0.103 0.737 B_Naive1 L2
ENSG00000116133 DHCR24 73969 sc-eQTL 3.41e-01 0.0918 0.0962 0.737 B_Naive1 L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 2.58e-01 0.0972 0.0857 0.737 B_Naive1 L2
ENSG00000116209 TMEM59 907660 sc-eQTL 6.12e-01 0.0317 0.0624 0.737 B_Naive1 L2
ENSG00000116221 MRPL37 777123 sc-eQTL 1.71e-01 0.126 0.0917 0.737 B_Naive1 L2
ENSG00000157216 SSBP3 547685 sc-eQTL 9.19e-01 -0.00891 0.0878 0.737 B_Naive1 L2
ENSG00000162402 USP24 -254200 sc-eQTL 7.71e-01 0.0201 0.0691 0.737 B_Naive1 L2
ENSG00000215883 CYB5RL 761128 sc-eQTL 7.68e-02 -0.184 0.104 0.737 B_Naive1 L2
ENSG00000243725 TTC4 245303 sc-eQTL 6.30e-01 0.0454 0.0941 0.737 B_Naive1 L2
ENSG00000006555 TTC22 159841 sc-eQTL 1.74e-01 0.138 0.101 0.738 B_Naive2 L2
ENSG00000116133 DHCR24 73969 sc-eQTL 3.91e-01 0.0759 0.0882 0.738 B_Naive2 L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 8.49e-01 -0.0187 0.0981 0.738 B_Naive2 L2
ENSG00000116209 TMEM59 907660 sc-eQTL 8.44e-01 -0.016 0.0807 0.738 B_Naive2 L2
ENSG00000116221 MRPL37 777123 sc-eQTL 3.55e-01 0.088 0.0949 0.738 B_Naive2 L2
ENSG00000157216 SSBP3 547685 sc-eQTL 1.64e-01 -0.13 0.0932 0.738 B_Naive2 L2
ENSG00000162402 USP24 -254200 sc-eQTL 9.74e-01 0.00241 0.0742 0.738 B_Naive2 L2
ENSG00000215883 CYB5RL 761128 sc-eQTL 6.22e-02 -0.194 0.104 0.738 B_Naive2 L2
ENSG00000243725 TTC4 245303 sc-eQTL 8.79e-01 0.0166 0.109 0.738 B_Naive2 L2
ENSG00000006555 TTC22 159841 sc-eQTL 9.04e-01 0.0114 0.0948 0.739 CD4_CTL L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 2.23e-01 0.119 0.0972 0.739 CD4_CTL L2
ENSG00000116209 TMEM59 907660 sc-eQTL 3.45e-01 -0.0838 0.0885 0.739 CD4_CTL L2
ENSG00000116221 MRPL37 777123 sc-eQTL 3.67e-01 -0.0984 0.109 0.739 CD4_CTL L2
ENSG00000157216 SSBP3 547685 sc-eQTL 7.63e-01 -0.0203 0.0671 0.739 CD4_CTL L2
ENSG00000162402 USP24 -254200 sc-eQTL 9.82e-01 -0.00206 0.0922 0.739 CD4_CTL L2
ENSG00000243725 TTC4 245303 sc-eQTL 7.39e-01 0.0344 0.103 0.739 CD4_CTL L2
ENSG00000006555 TTC22 159841 sc-eQTL 1.42e-01 0.128 0.0866 0.737 CD4_Naive L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 5.48e-01 -0.0398 0.0662 0.737 CD4_Naive L2
ENSG00000116209 TMEM59 907660 sc-eQTL 1.80e-01 0.0862 0.0641 0.737 CD4_Naive L2
ENSG00000116221 MRPL37 777123 sc-eQTL 6.84e-01 -0.0338 0.083 0.737 CD4_Naive L2
ENSG00000157216 SSBP3 547685 sc-eQTL 5.12e-01 0.0435 0.0662 0.737 CD4_Naive L2
ENSG00000162402 USP24 -254200 sc-eQTL 8.86e-01 0.00821 0.0572 0.737 CD4_Naive L2
ENSG00000243725 TTC4 245303 sc-eQTL 2.27e-01 0.105 0.0868 0.737 CD4_Naive L2
ENSG00000006555 TTC22 159841 sc-eQTL 2.74e-02 0.202 0.0908 0.737 CD4_TCM L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 1.16e-01 -0.14 0.0889 0.737 CD4_TCM L2
ENSG00000116209 TMEM59 907660 sc-eQTL 3.38e-01 0.0646 0.0673 0.737 CD4_TCM L2
ENSG00000116221 MRPL37 777123 sc-eQTL 6.01e-01 -0.0444 0.0848 0.737 CD4_TCM L2
ENSG00000157216 SSBP3 547685 sc-eQTL 2.52e-02 0.185 0.0821 0.737 CD4_TCM L2
ENSG00000162402 USP24 -254200 sc-eQTL 4.53e-01 0.0517 0.0688 0.737 CD4_TCM L2
ENSG00000243725 TTC4 245303 sc-eQTL 4.06e-02 0.202 0.0983 0.737 CD4_TCM L2
ENSG00000006555 TTC22 159841 sc-eQTL 1.82e-01 -0.14 0.105 0.737 CD4_TEM L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 4.55e-01 -0.0745 0.0995 0.737 CD4_TEM L2
ENSG00000116209 TMEM59 907660 sc-eQTL 9.03e-01 -0.00944 0.0772 0.737 CD4_TEM L2
ENSG00000116221 MRPL37 777123 sc-eQTL 7.19e-01 0.0358 0.0993 0.737 CD4_TEM L2
ENSG00000157216 SSBP3 547685 sc-eQTL 2.33e-02 0.192 0.0842 0.737 CD4_TEM L2
ENSG00000162402 USP24 -254200 sc-eQTL 7.45e-01 0.0252 0.0775 0.737 CD4_TEM L2
ENSG00000243725 TTC4 245303 sc-eQTL 1.92e-02 0.239 0.101 0.737 CD4_TEM L2
ENSG00000006555 TTC22 159841 sc-eQTL 7.53e-01 0.0264 0.0836 0.737 CD8_CTL L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 3.09e-01 0.0943 0.0924 0.737 CD8_CTL L2
ENSG00000116209 TMEM59 907660 sc-eQTL 6.70e-01 -0.0344 0.0805 0.737 CD8_CTL L2
ENSG00000116221 MRPL37 777123 sc-eQTL 7.12e-01 -0.0352 0.0954 0.737 CD8_CTL L2
ENSG00000157216 SSBP3 547685 sc-eQTL 3.02e-01 -0.0673 0.0651 0.737 CD8_CTL L2
ENSG00000162402 USP24 -254200 sc-eQTL 4.96e-01 0.0442 0.0648 0.737 CD8_CTL L2
ENSG00000243725 TTC4 245303 sc-eQTL 2.96e-02 -0.21 0.096 0.737 CD8_CTL L2
ENSG00000006555 TTC22 159841 sc-eQTL 7.75e-01 -0.0272 0.0947 0.737 CD8_Naive L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 1.16e-01 -0.135 0.0852 0.737 CD8_Naive L2
ENSG00000116209 TMEM59 907660 sc-eQTL 9.27e-01 0.00772 0.0839 0.737 CD8_Naive L2
ENSG00000116221 MRPL37 777123 sc-eQTL 3.90e-02 0.207 0.0996 0.737 CD8_Naive L2
ENSG00000157216 SSBP3 547685 sc-eQTL 6.69e-01 0.0326 0.0761 0.737 CD8_Naive L2
ENSG00000162402 USP24 -254200 sc-eQTL 5.94e-01 0.037 0.0692 0.737 CD8_Naive L2
ENSG00000243725 TTC4 245303 sc-eQTL 2.97e-01 0.106 0.101 0.737 CD8_Naive L2
ENSG00000006555 TTC22 159841 sc-eQTL 3.52e-01 0.095 0.102 0.748 CD8_TCM L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 4.09e-01 0.0847 0.102 0.748 CD8_TCM L2
ENSG00000116209 TMEM59 907660 sc-eQTL 7.22e-01 -0.0322 0.0904 0.748 CD8_TCM L2
ENSG00000116221 MRPL37 777123 sc-eQTL 1.55e-01 -0.145 0.102 0.748 CD8_TCM L2
ENSG00000157216 SSBP3 547685 sc-eQTL 7.94e-01 0.0233 0.0889 0.748 CD8_TCM L2
ENSG00000162402 USP24 -254200 sc-eQTL 4.54e-01 -0.0646 0.0861 0.748 CD8_TCM L2
ENSG00000243725 TTC4 245303 sc-eQTL 1.18e-02 0.262 0.103 0.748 CD8_TCM L2
ENSG00000006555 TTC22 159841 sc-eQTL 6.78e-01 0.0407 0.0978 0.728 CD8_TEM L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 1.57e-01 -0.144 0.102 0.728 CD8_TEM L2
ENSG00000116209 TMEM59 907660 sc-eQTL 6.98e-01 -0.0383 0.0987 0.728 CD8_TEM L2
ENSG00000116221 MRPL37 777123 sc-eQTL 9.20e-01 0.01 0.1 0.728 CD8_TEM L2
ENSG00000157216 SSBP3 547685 sc-eQTL 3.85e-01 0.0822 0.0945 0.728 CD8_TEM L2
ENSG00000162402 USP24 -254200 sc-eQTL 3.45e-01 -0.0942 0.0995 0.728 CD8_TEM L2
ENSG00000243725 TTC4 245303 sc-eQTL 1.30e-01 0.153 0.101 0.728 CD8_TEM L2
ENSG00000006555 TTC22 159841 sc-eQTL 5.85e-02 0.175 0.0922 0.738 MAIT L2
ENSG00000116133 DHCR24 73969 sc-eQTL 3.44e-01 -0.0652 0.0687 0.738 MAIT L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 8.04e-01 0.024 0.0969 0.738 MAIT L2
ENSG00000116209 TMEM59 907660 sc-eQTL 3.70e-01 -0.0785 0.0874 0.738 MAIT L2
ENSG00000116221 MRPL37 777123 sc-eQTL 5.86e-01 -0.058 0.106 0.738 MAIT L2
ENSG00000157216 SSBP3 547685 sc-eQTL 5.91e-01 -0.0506 0.0942 0.738 MAIT L2
ENSG00000162402 USP24 -254200 sc-eQTL 3.13e-01 -0.0845 0.0835 0.738 MAIT L2
ENSG00000215883 CYB5RL 761128 sc-eQTL 3.73e-01 0.0867 0.0971 0.738 MAIT L2
ENSG00000243725 TTC4 245303 sc-eQTL 1.11e-01 -0.154 0.0961 0.738 MAIT L2
ENSG00000006555 TTC22 159841 sc-eQTL 2.04e-01 -0.132 0.103 0.738 NK_CD56bright L2
ENSG00000116133 DHCR24 73969 sc-eQTL 4.68e-01 0.0665 0.0914 0.738 NK_CD56bright L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 6.48e-01 0.0442 0.0967 0.738 NK_CD56bright L2
ENSG00000116209 TMEM59 907660 sc-eQTL 4.58e-01 0.07 0.0942 0.738 NK_CD56bright L2
ENSG00000116221 MRPL37 777123 sc-eQTL 6.18e-01 -0.0526 0.105 0.738 NK_CD56bright L2
ENSG00000157216 SSBP3 547685 sc-eQTL 3.39e-02 -0.168 0.0785 0.738 NK_CD56bright L2
ENSG00000162398 LEXM 155101 sc-eQTL 9.70e-01 0.00351 0.0938 0.738 NK_CD56bright L2
ENSG00000162402 USP24 -254200 sc-eQTL 6.89e-01 -0.0324 0.0807 0.738 NK_CD56bright L2
ENSG00000243725 TTC4 245303 sc-eQTL 5.71e-01 -0.0577 0.102 0.738 NK_CD56bright L2
ENSG00000006555 TTC22 159841 sc-eQTL 5.22e-01 0.0557 0.0867 0.735 NK_CD56dim L2
ENSG00000116133 DHCR24 73969 sc-eQTL 1.29e-03 0.288 0.0883 0.735 NK_CD56dim L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 3.15e-01 0.0984 0.0978 0.735 NK_CD56dim L2
ENSG00000116209 TMEM59 907660 sc-eQTL 1.06e-01 0.117 0.0723 0.735 NK_CD56dim L2
ENSG00000116221 MRPL37 777123 sc-eQTL 6.86e-01 0.0383 0.0945 0.735 NK_CD56dim L2
ENSG00000157216 SSBP3 547685 sc-eQTL 2.13e-02 -0.177 0.0764 0.735 NK_CD56dim L2
ENSG00000162398 LEXM 155101 sc-eQTL 5.28e-01 -0.0562 0.0889 0.735 NK_CD56dim L2
ENSG00000162402 USP24 -254200 sc-eQTL 3.92e-01 -0.0484 0.0565 0.735 NK_CD56dim L2
ENSG00000243725 TTC4 245303 sc-eQTL 7.79e-01 0.0273 0.0968 0.735 NK_CD56dim L2
ENSG00000006555 TTC22 159841 sc-eQTL 9.13e-01 0.0114 0.104 0.733 NK_HLA L2
ENSG00000116133 DHCR24 73969 sc-eQTL 9.34e-01 0.00839 0.101 0.733 NK_HLA L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 9.11e-01 -0.0109 0.0978 0.733 NK_HLA L2
ENSG00000116209 TMEM59 907660 sc-eQTL 4.40e-01 0.0751 0.097 0.733 NK_HLA L2
ENSG00000116221 MRPL37 777123 sc-eQTL 2.11e-01 0.134 0.107 0.733 NK_HLA L2
ENSG00000157216 SSBP3 547685 sc-eQTL 6.76e-01 -0.0366 0.0874 0.733 NK_HLA L2
ENSG00000162398 LEXM 155101 sc-eQTL 1.18e-01 0.154 0.098 0.733 NK_HLA L2
ENSG00000162402 USP24 -254200 sc-eQTL 5.06e-01 0.0482 0.0723 0.733 NK_HLA L2
ENSG00000243725 TTC4 245303 sc-eQTL 2.82e-01 -0.116 0.108 0.733 NK_HLA L2
ENSG00000006555 TTC22 159841 sc-eQTL 7.66e-01 0.0272 0.0913 0.735 NK_cytokine L2
ENSG00000116133 DHCR24 73969 sc-eQTL 3.10e-01 0.0937 0.0921 0.735 NK_cytokine L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 9.17e-01 -0.00962 0.0917 0.735 NK_cytokine L2
ENSG00000116209 TMEM59 907660 sc-eQTL 9.20e-01 0.00745 0.0745 0.735 NK_cytokine L2
ENSG00000116221 MRPL37 777123 sc-eQTL 4.46e-01 0.07 0.0917 0.735 NK_cytokine L2
ENSG00000157216 SSBP3 547685 sc-eQTL 1.83e-01 -0.103 0.0767 0.735 NK_cytokine L2
ENSG00000162398 LEXM 155101 sc-eQTL 1.27e-01 0.147 0.0957 0.735 NK_cytokine L2
ENSG00000162402 USP24 -254200 sc-eQTL 6.40e-02 0.121 0.0651 0.735 NK_cytokine L2
ENSG00000243725 TTC4 245303 sc-eQTL 2.78e-01 0.106 0.097 0.735 NK_cytokine L2
ENSG00000006555 TTC22 159841 sc-eQTL 8.01e-01 0.029 0.115 0.733 PB L2
ENSG00000116133 DHCR24 73969 sc-eQTL 1.54e-01 -0.144 0.101 0.733 PB L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 7.38e-01 -0.0414 0.124 0.733 PB L2
ENSG00000116209 TMEM59 907660 sc-eQTL 8.93e-01 -0.007 0.0517 0.733 PB L2
ENSG00000116221 MRPL37 777123 sc-eQTL 8.78e-01 -0.0144 0.094 0.733 PB L2
ENSG00000157216 SSBP3 547685 sc-eQTL 7.67e-01 -0.0322 0.109 0.733 PB L2
ENSG00000162402 USP24 -254200 sc-eQTL 4.47e-01 -0.0938 0.123 0.733 PB L2
ENSG00000215883 CYB5RL 761128 sc-eQTL 1.13e-01 -0.202 0.126 0.733 PB L2
ENSG00000243725 TTC4 245303 sc-eQTL 4.85e-01 -0.0834 0.119 0.733 PB L2
ENSG00000006555 TTC22 159841 sc-eQTL 7.14e-02 -0.167 0.0921 0.739 Pro_T L2
ENSG00000116133 DHCR24 73969 sc-eQTL 5.49e-01 -0.0472 0.0788 0.739 Pro_T L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 3.47e-01 -0.0905 0.0961 0.739 Pro_T L2
ENSG00000116209 TMEM59 907660 sc-eQTL 3.88e-01 0.0577 0.0667 0.739 Pro_T L2
ENSG00000116221 MRPL37 777123 sc-eQTL 2.54e-02 -0.146 0.0646 0.739 Pro_T L2
ENSG00000157216 SSBP3 547685 sc-eQTL 2.88e-01 -0.0779 0.0732 0.739 Pro_T L2
ENSG00000162402 USP24 -254200 sc-eQTL 4.43e-01 0.0687 0.0894 0.739 Pro_T L2
ENSG00000215883 CYB5RL 761128 sc-eQTL 9.51e-01 0.00548 0.0883 0.739 Pro_T L2
ENSG00000243725 TTC4 245303 sc-eQTL 4.01e-03 0.28 0.0963 0.739 Pro_T L2
ENSG00000006555 TTC22 159841 sc-eQTL 7.71e-01 0.0268 0.0922 0.737 Treg L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 9.84e-01 0.00194 0.0988 0.737 Treg L2
ENSG00000116209 TMEM59 907660 sc-eQTL 7.79e-01 -0.0219 0.0781 0.737 Treg L2
ENSG00000116221 MRPL37 777123 sc-eQTL 7.40e-01 -0.0321 0.0966 0.737 Treg L2
ENSG00000157216 SSBP3 547685 sc-eQTL 3.25e-01 -0.0849 0.086 0.737 Treg L2
ENSG00000162402 USP24 -254200 sc-eQTL 7.03e-02 0.148 0.0815 0.737 Treg L2
ENSG00000243725 TTC4 245303 sc-eQTL 6.53e-01 0.0466 0.103 0.737 Treg L2
ENSG00000116133 DHCR24 73969 sc-eQTL 4.18e-02 0.172 0.0837 0.734 cDC L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 8.50e-01 0.0189 0.0999 0.734 cDC L2
ENSG00000116209 TMEM59 907660 sc-eQTL 1.31e-01 -0.128 0.0843 0.734 cDC L2
ENSG00000116221 MRPL37 777123 sc-eQTL 7.63e-01 -0.0328 0.109 0.734 cDC L2
ENSG00000157216 SSBP3 547685 sc-eQTL 9.49e-01 0.0064 0.1 0.734 cDC L2
ENSG00000162390 ACOT11 418907 sc-eQTL 3.26e-01 -0.0914 0.0928 0.734 cDC L2
ENSG00000162402 USP24 -254200 sc-eQTL 8.62e-01 0.0182 0.104 0.734 cDC L2
ENSG00000215883 CYB5RL 761128 sc-eQTL 9.60e-02 -0.149 0.089 0.734 cDC L2
ENSG00000243725 TTC4 245303 sc-eQTL 1.54e-01 0.152 0.106 0.734 cDC L2
ENSG00000116133 DHCR24 73969 sc-eQTL 5.89e-01 0.0326 0.0602 0.737 cMono_IL1B L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 7.55e-02 0.148 0.083 0.737 cMono_IL1B L2
ENSG00000116209 TMEM59 907660 sc-eQTL 4.68e-01 0.0368 0.0507 0.737 cMono_IL1B L2
ENSG00000116221 MRPL37 777123 sc-eQTL 9.25e-01 0.00854 0.0904 0.737 cMono_IL1B L2
ENSG00000157216 SSBP3 547685 sc-eQTL 3.98e-02 -0.189 0.0913 0.737 cMono_IL1B L2
ENSG00000162402 USP24 -254200 sc-eQTL 4.78e-01 -0.0484 0.0681 0.737 cMono_IL1B L2
ENSG00000243725 TTC4 245303 sc-eQTL 6.01e-01 0.0545 0.104 0.737 cMono_IL1B L2
ENSG00000116133 DHCR24 73969 sc-eQTL 8.93e-01 0.00761 0.0565 0.737 cMono_S100A L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 8.59e-01 -0.0153 0.0862 0.737 cMono_S100A L2
ENSG00000116209 TMEM59 907660 sc-eQTL 2.58e-01 -0.078 0.0688 0.737 cMono_S100A L2
ENSG00000116221 MRPL37 777123 sc-eQTL 2.23e-02 0.227 0.0984 0.737 cMono_S100A L2
ENSG00000157216 SSBP3 547685 sc-eQTL 1.40e-01 -0.153 0.103 0.737 cMono_S100A L2
ENSG00000162402 USP24 -254200 sc-eQTL 8.25e-02 0.145 0.0831 0.737 cMono_S100A L2
ENSG00000243725 TTC4 245303 sc-eQTL 9.32e-01 -0.00892 0.105 0.737 cMono_S100A L2
ENSG00000006555 TTC22 159841 sc-eQTL 6.69e-01 -0.0406 0.0949 0.73 gdT L2
ENSG00000116133 DHCR24 73969 sc-eQTL 8.30e-01 -0.0228 0.106 0.73 gdT L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 4.18e-01 0.0861 0.106 0.73 gdT L2
ENSG00000116209 TMEM59 907660 sc-eQTL 4.22e-01 0.0867 0.108 0.73 gdT L2
ENSG00000116221 MRPL37 777123 sc-eQTL 2.15e-01 0.153 0.123 0.73 gdT L2
ENSG00000157216 SSBP3 547685 sc-eQTL 4.65e-01 -0.0554 0.0756 0.73 gdT L2
ENSG00000162402 USP24 -254200 sc-eQTL 4.65e-01 -0.0744 0.102 0.73 gdT L2
ENSG00000215883 CYB5RL 761128 sc-eQTL 2.90e-02 -0.229 0.104 0.73 gdT L2
ENSG00000243725 TTC4 245303 sc-eQTL 2.36e-01 -0.141 0.119 0.73 gdT L2
ENSG00000116133 DHCR24 73969 sc-eQTL 7.02e-01 0.0292 0.0762 0.738 intMono L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 1.69e-01 0.13 0.0945 0.738 intMono L2
ENSG00000116209 TMEM59 907660 sc-eQTL 9.33e-01 0.00583 0.0698 0.738 intMono L2
ENSG00000116221 MRPL37 777123 sc-eQTL 7.66e-01 0.0318 0.107 0.738 intMono L2
ENSG00000157216 SSBP3 547685 sc-eQTL 5.28e-03 -0.301 0.107 0.738 intMono L2
ENSG00000162402 USP24 -254200 sc-eQTL 8.07e-01 0.0237 0.0972 0.738 intMono L2
ENSG00000243725 TTC4 245303 sc-eQTL 4.41e-01 0.0797 0.103 0.738 intMono L2
ENSG00000116133 DHCR24 73969 sc-eQTL 9.74e-01 0.0025 0.0752 0.731 ncMono L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 1.27e-01 -0.143 0.0935 0.731 ncMono L2
ENSG00000116209 TMEM59 907660 sc-eQTL 5.34e-01 -0.0469 0.0752 0.731 ncMono L2
ENSG00000116221 MRPL37 777123 sc-eQTL 4.02e-02 0.198 0.096 0.731 ncMono L2
ENSG00000157216 SSBP3 547685 sc-eQTL 1.06e-01 -0.171 0.105 0.731 ncMono L2
ENSG00000162402 USP24 -254200 sc-eQTL 7.93e-01 -0.0223 0.0848 0.731 ncMono L2
ENSG00000243725 TTC4 245303 sc-eQTL 1.61e-01 0.141 0.0999 0.731 ncMono L2
ENSG00000116133 DHCR24 73969 sc-eQTL 8.52e-01 -0.0168 0.0901 0.743 pDC L2
ENSG00000116205 TCEANC2 907580 sc-eQTL 5.02e-01 -0.0727 0.108 0.743 pDC L2
ENSG00000116209 TMEM59 907660 sc-eQTL 3.90e-01 0.0742 0.0861 0.743 pDC L2
ENSG00000116221 MRPL37 777123 sc-eQTL 7.20e-01 -0.0412 0.115 0.743 pDC L2
ENSG00000157216 SSBP3 547685 sc-eQTL 1.79e-01 0.137 0.101 0.743 pDC L2
ENSG00000162390 ACOT11 418907 sc-eQTL 8.10e-01 -0.0103 0.0428 0.743 pDC L2
ENSG00000162402 USP24 -254200 sc-eQTL 4.74e-01 0.0519 0.0722 0.743 pDC L2
ENSG00000215883 CYB5RL 761128 sc-eQTL 5.18e-01 0.064 0.0987 0.743 pDC L2
ENSG00000243725 TTC4 245303 sc-eQTL 6.81e-01 -0.0469 0.114 0.743 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 159841 sc-eQTL 1.48e-01 -0.139 0.0959 0.737 B_Memory LOneK1K
ENSG00000116133 DHCR24 73969 sc-eQTL 3.20e-01 0.0962 0.0965 0.737 B_Memory LOneK1K
ENSG00000116205 TCEANC2 907580 sc-eQTL 5.45e-01 0.0566 0.0934 0.737 B_Memory LOneK1K
ENSG00000116209 TMEM59 907660 sc-eQTL 2.11e-01 -0.0909 0.0724 0.737 B_Memory LOneK1K
ENSG00000116221 MRPL37 777123 sc-eQTL 3.14e-02 -0.187 0.0861 0.737 B_Memory LOneK1K
ENSG00000157216 SSBP3 547685 sc-eQTL 5.47e-01 0.0457 0.0757 0.737 B_Memory LOneK1K
ENSG00000162402 USP24 -254200 sc-eQTL 1.35e-01 0.103 0.0687 0.737 B_Memory LOneK1K
ENSG00000215883 CYB5RL 761128 sc-eQTL 9.88e-01 0.00164 0.106 0.737 B_Memory LOneK1K
ENSG00000243725 TTC4 245303 sc-eQTL 2.00e-01 -0.122 0.0949 0.737 B_Memory LOneK1K
ENSG00000006555 TTC22 159841 sc-eQTL 6.45e-01 0.0476 0.103 0.737 B_Naive LOneK1K
ENSG00000116133 DHCR24 73969 sc-eQTL 1.03e-01 0.152 0.0924 0.737 B_Naive LOneK1K
ENSG00000116205 TCEANC2 907580 sc-eQTL 2.41e-01 0.0985 0.0838 0.737 B_Naive LOneK1K
ENSG00000116209 TMEM59 907660 sc-eQTL 6.92e-01 0.0237 0.0597 0.737 B_Naive LOneK1K
ENSG00000116221 MRPL37 777123 sc-eQTL 3.61e-01 0.0785 0.0857 0.737 B_Naive LOneK1K
ENSG00000157216 SSBP3 547685 sc-eQTL 1.72e-01 -0.105 0.0765 0.737 B_Naive LOneK1K
ENSG00000162402 USP24 -254200 sc-eQTL 8.15e-01 -0.0154 0.0659 0.737 B_Naive LOneK1K
ENSG00000215883 CYB5RL 761128 sc-eQTL 5.04e-04 -0.358 0.101 0.737 B_Naive LOneK1K
ENSG00000243725 TTC4 245303 sc-eQTL 7.36e-01 0.0332 0.0981 0.737 B_Naive LOneK1K
ENSG00000116133 DHCR24 73969 sc-eQTL 8.10e-01 0.0142 0.059 0.737 CD14_Mono LOneK1K
ENSG00000116205 TCEANC2 907580 sc-eQTL 3.40e-01 0.0705 0.0737 0.737 CD14_Mono LOneK1K
ENSG00000116209 TMEM59 907660 sc-eQTL 7.41e-01 -0.0168 0.0509 0.737 CD14_Mono LOneK1K
ENSG00000116221 MRPL37 777123 sc-eQTL 1.87e-01 0.119 0.0898 0.737 CD14_Mono LOneK1K
ENSG00000157216 SSBP3 547685 sc-eQTL 8.83e-03 -0.245 0.0929 0.737 CD14_Mono LOneK1K
ENSG00000162402 USP24 -254200 sc-eQTL 9.07e-01 0.00756 0.0645 0.737 CD14_Mono LOneK1K
ENSG00000243725 TTC4 245303 sc-eQTL 7.13e-01 0.0393 0.107 0.737 CD14_Mono LOneK1K
ENSG00000116133 DHCR24 73969 sc-eQTL 9.04e-01 -0.00859 0.0712 0.735 CD16_Mono LOneK1K
ENSG00000116205 TCEANC2 907580 sc-eQTL 6.91e-01 -0.0372 0.0935 0.735 CD16_Mono LOneK1K
ENSG00000116209 TMEM59 907660 sc-eQTL 5.88e-01 -0.0377 0.0695 0.735 CD16_Mono LOneK1K
ENSG00000116221 MRPL37 777123 sc-eQTL 7.52e-02 0.169 0.0946 0.735 CD16_Mono LOneK1K
ENSG00000157216 SSBP3 547685 sc-eQTL 6.20e-03 -0.276 0.0999 0.735 CD16_Mono LOneK1K
ENSG00000162402 USP24 -254200 sc-eQTL 9.73e-01 0.00275 0.0801 0.735 CD16_Mono LOneK1K
ENSG00000243725 TTC4 245303 sc-eQTL 1.50e-01 0.144 0.1 0.735 CD16_Mono LOneK1K
ENSG00000006555 TTC22 159841 sc-eQTL 7.54e-01 0.0265 0.0845 0.735 NK_CD56dim LOneK1K
ENSG00000116133 DHCR24 73969 sc-eQTL 6.46e-03 0.238 0.0867 0.735 NK_CD56dim LOneK1K
ENSG00000116205 TCEANC2 907580 sc-eQTL 6.08e-01 0.0444 0.0865 0.735 NK_CD56dim LOneK1K
ENSG00000116209 TMEM59 907660 sc-eQTL 2.02e-01 0.0854 0.0667 0.735 NK_CD56dim LOneK1K
ENSG00000116221 MRPL37 777123 sc-eQTL 1.70e-01 0.123 0.0893 0.735 NK_CD56dim LOneK1K
ENSG00000157216 SSBP3 547685 sc-eQTL 2.42e-02 -0.165 0.0727 0.735 NK_CD56dim LOneK1K
ENSG00000162398 LEXM 155101 sc-eQTL 7.28e-01 0.0289 0.0829 0.735 NK_CD56dim LOneK1K
ENSG00000162402 USP24 -254200 sc-eQTL 4.34e-01 0.0412 0.0525 0.735 NK_CD56dim LOneK1K
ENSG00000243725 TTC4 245303 sc-eQTL 6.00e-01 0.0492 0.0936 0.735 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000234810 \N -368124 1.27e-06 1.36e-06 2.62e-07 1.01e-06 1.78e-07 3.08e-07 1.02e-06 3.27e-07 1.12e-06 2.72e-07 1.39e-06 5.51e-07 1.82e-06 2.72e-07 4.12e-07 4.47e-07 8.89e-07 5.68e-07 5.26e-07 6.33e-07 2.53e-07 1.08e-06 8.26e-07 3.53e-07 1.98e-06 2.54e-07 6.3e-07 6.23e-07 8.81e-07 1.11e-06 5.45e-07 1.87e-07 9.26e-08 5.24e-07 4.2e-07 3.36e-07 5.12e-07 1.24e-07 2.95e-07 3.11e-07 8.55e-08 1.41e-06 6.65e-08 6.53e-08 1.71e-07 1.25e-07 1.08e-07 3.77e-08 5.94e-08