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Genes within 1Mb (chr1:54959803:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 158480 sc-eQTL 7.56e-01 -0.0297 0.0955 0.737 B L1
ENSG00000116133 DHCR24 72608 sc-eQTL 5.31e-01 0.0566 0.0902 0.737 B L1
ENSG00000116205 TCEANC2 906219 sc-eQTL 8.67e-02 0.133 0.0774 0.737 B L1
ENSG00000116209 TMEM59 906299 sc-eQTL 3.89e-01 -0.0409 0.0474 0.737 B L1
ENSG00000116221 MRPL37 775762 sc-eQTL 7.83e-01 -0.0171 0.0621 0.737 B L1
ENSG00000157216 SSBP3 546324 sc-eQTL 6.74e-01 0.0274 0.065 0.737 B L1
ENSG00000162402 USP24 -255561 sc-eQTL 2.29e-01 0.0663 0.0549 0.737 B L1
ENSG00000215883 CYB5RL 759767 sc-eQTL 9.07e-02 -0.179 0.105 0.737 B L1
ENSG00000243725 TTC4 243942 sc-eQTL 8.92e-01 0.0125 0.0923 0.737 B L1
ENSG00000006555 TTC22 158480 sc-eQTL 2.74e-02 0.163 0.0733 0.737 CD4T L1
ENSG00000116205 TCEANC2 906219 sc-eQTL 2.25e-01 -0.0735 0.0604 0.737 CD4T L1
ENSG00000116209 TMEM59 906299 sc-eQTL 3.06e-01 0.0578 0.0563 0.737 CD4T L1
ENSG00000116221 MRPL37 775762 sc-eQTL 4.49e-01 -0.0592 0.0779 0.737 CD4T L1
ENSG00000157216 SSBP3 546324 sc-eQTL 9.92e-02 0.107 0.0644 0.737 CD4T L1
ENSG00000162402 USP24 -255561 sc-eQTL 2.26e-01 0.0638 0.0526 0.737 CD4T L1
ENSG00000243725 TTC4 243942 sc-eQTL 2.46e-02 0.178 0.0785 0.737 CD4T L1
ENSG00000006555 TTC22 158480 sc-eQTL 3.07e-01 0.0663 0.0648 0.737 CD8T L1
ENSG00000116205 TCEANC2 906219 sc-eQTL 8.33e-01 -0.0171 0.0809 0.737 CD8T L1
ENSG00000116209 TMEM59 906299 sc-eQTL 6.36e-01 0.0266 0.0562 0.737 CD8T L1
ENSG00000116221 MRPL37 775762 sc-eQTL 4.76e-01 0.0551 0.0772 0.737 CD8T L1
ENSG00000157216 SSBP3 546324 sc-eQTL 8.00e-01 0.0141 0.0556 0.737 CD8T L1
ENSG00000162402 USP24 -255561 sc-eQTL 9.50e-01 0.00338 0.0537 0.737 CD8T L1
ENSG00000243725 TTC4 243942 sc-eQTL 5.57e-01 0.0548 0.0931 0.737 CD8T L1
ENSG00000116133 DHCR24 72608 sc-eQTL 1.42e-01 0.126 0.0857 0.741 DC L1
ENSG00000116205 TCEANC2 906219 sc-eQTL 7.65e-01 -0.0289 0.0966 0.741 DC L1
ENSG00000116209 TMEM59 906299 sc-eQTL 7.36e-01 -0.0257 0.0759 0.741 DC L1
ENSG00000116221 MRPL37 775762 sc-eQTL 5.87e-01 -0.0555 0.102 0.741 DC L1
ENSG00000157216 SSBP3 546324 sc-eQTL 2.96e-01 0.095 0.0907 0.741 DC L1
ENSG00000162390 ACOT11 417546 sc-eQTL 6.41e-01 -0.0408 0.0874 0.741 DC L1
ENSG00000162402 USP24 -255561 sc-eQTL 4.90e-01 0.0364 0.0527 0.741 DC L1
ENSG00000215883 CYB5RL 759767 sc-eQTL 9.61e-02 -0.158 0.0947 0.741 DC L1
ENSG00000243725 TTC4 243942 sc-eQTL 2.85e-01 0.11 0.102 0.741 DC L1
ENSG00000116133 DHCR24 72608 sc-eQTL 6.57e-01 0.0278 0.0625 0.737 Mono L1
ENSG00000116205 TCEANC2 906219 sc-eQTL 5.92e-01 0.0362 0.0674 0.737 Mono L1
ENSG00000116209 TMEM59 906299 sc-eQTL 5.86e-01 -0.0273 0.0501 0.737 Mono L1
ENSG00000116221 MRPL37 775762 sc-eQTL 1.06e-01 0.135 0.0833 0.737 Mono L1
ENSG00000157216 SSBP3 546324 sc-eQTL 1.77e-03 -0.297 0.0938 0.737 Mono L1
ENSG00000162402 USP24 -255561 sc-eQTL 9.41e-01 -0.00421 0.0572 0.737 Mono L1
ENSG00000243725 TTC4 243942 sc-eQTL 3.10e-01 0.102 0.101 0.737 Mono L1
ENSG00000006555 TTC22 158480 sc-eQTL 8.14e-01 0.0201 0.0854 0.736 NK L1
ENSG00000116133 DHCR24 72608 sc-eQTL 1.04e-02 0.219 0.0848 0.736 NK L1
ENSG00000116205 TCEANC2 906219 sc-eQTL 4.47e-01 0.0647 0.0849 0.736 NK L1
ENSG00000116209 TMEM59 906299 sc-eQTL 2.85e-01 0.0712 0.0664 0.736 NK L1
ENSG00000116221 MRPL37 775762 sc-eQTL 3.87e-01 0.0717 0.0826 0.736 NK L1
ENSG00000157216 SSBP3 546324 sc-eQTL 3.70e-02 -0.149 0.0711 0.736 NK L1
ENSG00000162398 LEXM 153740 sc-eQTL 9.77e-01 -0.00234 0.0806 0.736 NK L1
ENSG00000162402 USP24 -255561 sc-eQTL 5.07e-01 0.0324 0.0488 0.736 NK L1
ENSG00000243725 TTC4 243942 sc-eQTL 6.95e-01 0.0362 0.0924 0.736 NK L1
ENSG00000006555 TTC22 158480 sc-eQTL 4.78e-01 0.0536 0.0753 0.737 Other_T L1
ENSG00000116133 DHCR24 72608 sc-eQTL 6.74e-01 -0.0246 0.0584 0.737 Other_T L1
ENSG00000116205 TCEANC2 906219 sc-eQTL 7.88e-01 0.0235 0.0875 0.737 Other_T L1
ENSG00000116209 TMEM59 906299 sc-eQTL 9.11e-01 -0.00671 0.06 0.737 Other_T L1
ENSG00000116221 MRPL37 775762 sc-eQTL 2.44e-01 -0.0655 0.0561 0.737 Other_T L1
ENSG00000157216 SSBP3 546324 sc-eQTL 8.53e-01 -0.012 0.0651 0.737 Other_T L1
ENSG00000162402 USP24 -255561 sc-eQTL 4.81e-01 -0.0489 0.0692 0.737 Other_T L1
ENSG00000215883 CYB5RL 759767 sc-eQTL 3.38e-01 0.0907 0.0945 0.737 Other_T L1
ENSG00000243725 TTC4 243942 sc-eQTL 6.97e-01 0.0367 0.0943 0.737 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 158480 sc-eQTL 5.70e-01 -0.0459 0.0806 0.727 B_Activated L2
ENSG00000116133 DHCR24 72608 sc-eQTL 3.58e-01 0.0871 0.0946 0.727 B_Activated L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 5.92e-01 -0.0546 0.102 0.727 B_Activated L2
ENSG00000116209 TMEM59 906299 sc-eQTL 7.47e-01 -0.035 0.108 0.727 B_Activated L2
ENSG00000116221 MRPL37 775762 sc-eQTL 3.53e-01 -0.108 0.117 0.727 B_Activated L2
ENSG00000157216 SSBP3 546324 sc-eQTL 4.98e-01 -0.0717 0.106 0.727 B_Activated L2
ENSG00000162402 USP24 -255561 sc-eQTL 4.44e-02 0.207 0.102 0.727 B_Activated L2
ENSG00000215883 CYB5RL 759767 sc-eQTL 5.06e-01 -0.0606 0.091 0.727 B_Activated L2
ENSG00000243725 TTC4 243942 sc-eQTL 3.93e-01 -0.0844 0.0986 0.727 B_Activated L2
ENSG00000006555 TTC22 158480 sc-eQTL 3.13e-01 -0.102 0.101 0.736 B_Intermediate L2
ENSG00000116133 DHCR24 72608 sc-eQTL 4.53e-01 0.0705 0.0937 0.736 B_Intermediate L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 6.79e-01 -0.0387 0.0935 0.736 B_Intermediate L2
ENSG00000116209 TMEM59 906299 sc-eQTL 2.96e-01 -0.0836 0.0798 0.736 B_Intermediate L2
ENSG00000116221 MRPL37 775762 sc-eQTL 1.35e-01 -0.14 0.0936 0.736 B_Intermediate L2
ENSG00000157216 SSBP3 546324 sc-eQTL 1.91e-01 0.115 0.0876 0.736 B_Intermediate L2
ENSG00000162402 USP24 -255561 sc-eQTL 5.27e-01 0.0469 0.074 0.736 B_Intermediate L2
ENSG00000215883 CYB5RL 759767 sc-eQTL 5.20e-01 0.0675 0.105 0.736 B_Intermediate L2
ENSG00000243725 TTC4 243942 sc-eQTL 9.52e-01 -0.00571 0.0953 0.736 B_Intermediate L2
ENSG00000006555 TTC22 158480 sc-eQTL 8.06e-01 -0.0239 0.0974 0.737 B_Memory L2
ENSG00000116133 DHCR24 72608 sc-eQTL 9.02e-01 -0.0119 0.0967 0.737 B_Memory L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 3.28e-02 0.22 0.102 0.737 B_Memory L2
ENSG00000116209 TMEM59 906299 sc-eQTL 1.96e-01 -0.111 0.0859 0.737 B_Memory L2
ENSG00000116221 MRPL37 775762 sc-eQTL 4.11e-01 -0.0718 0.0872 0.737 B_Memory L2
ENSG00000157216 SSBP3 546324 sc-eQTL 7.45e-01 -0.0266 0.0815 0.737 B_Memory L2
ENSG00000162402 USP24 -255561 sc-eQTL 6.35e-01 0.0379 0.0797 0.737 B_Memory L2
ENSG00000215883 CYB5RL 759767 sc-eQTL 9.05e-01 0.0118 0.0986 0.737 B_Memory L2
ENSG00000243725 TTC4 243942 sc-eQTL 5.28e-01 -0.0645 0.102 0.737 B_Memory L2
ENSG00000006555 TTC22 158480 sc-eQTL 4.60e-01 -0.0759 0.103 0.737 B_Naive1 L2
ENSG00000116133 DHCR24 72608 sc-eQTL 3.41e-01 0.0918 0.0962 0.737 B_Naive1 L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 2.58e-01 0.0972 0.0857 0.737 B_Naive1 L2
ENSG00000116209 TMEM59 906299 sc-eQTL 6.12e-01 0.0317 0.0624 0.737 B_Naive1 L2
ENSG00000116221 MRPL37 775762 sc-eQTL 1.71e-01 0.126 0.0917 0.737 B_Naive1 L2
ENSG00000157216 SSBP3 546324 sc-eQTL 9.19e-01 -0.00891 0.0878 0.737 B_Naive1 L2
ENSG00000162402 USP24 -255561 sc-eQTL 7.71e-01 0.0201 0.0691 0.737 B_Naive1 L2
ENSG00000215883 CYB5RL 759767 sc-eQTL 7.68e-02 -0.184 0.104 0.737 B_Naive1 L2
ENSG00000243725 TTC4 243942 sc-eQTL 6.30e-01 0.0454 0.0941 0.737 B_Naive1 L2
ENSG00000006555 TTC22 158480 sc-eQTL 1.74e-01 0.138 0.101 0.738 B_Naive2 L2
ENSG00000116133 DHCR24 72608 sc-eQTL 3.91e-01 0.0759 0.0882 0.738 B_Naive2 L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 8.49e-01 -0.0187 0.0981 0.738 B_Naive2 L2
ENSG00000116209 TMEM59 906299 sc-eQTL 8.44e-01 -0.016 0.0807 0.738 B_Naive2 L2
ENSG00000116221 MRPL37 775762 sc-eQTL 3.55e-01 0.088 0.0949 0.738 B_Naive2 L2
ENSG00000157216 SSBP3 546324 sc-eQTL 1.64e-01 -0.13 0.0932 0.738 B_Naive2 L2
ENSG00000162402 USP24 -255561 sc-eQTL 9.74e-01 0.00241 0.0742 0.738 B_Naive2 L2
ENSG00000215883 CYB5RL 759767 sc-eQTL 6.22e-02 -0.194 0.104 0.738 B_Naive2 L2
ENSG00000243725 TTC4 243942 sc-eQTL 8.79e-01 0.0166 0.109 0.738 B_Naive2 L2
ENSG00000006555 TTC22 158480 sc-eQTL 9.04e-01 0.0114 0.0948 0.739 CD4_CTL L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 2.23e-01 0.119 0.0972 0.739 CD4_CTL L2
ENSG00000116209 TMEM59 906299 sc-eQTL 3.45e-01 -0.0838 0.0885 0.739 CD4_CTL L2
ENSG00000116221 MRPL37 775762 sc-eQTL 3.67e-01 -0.0984 0.109 0.739 CD4_CTL L2
ENSG00000157216 SSBP3 546324 sc-eQTL 7.63e-01 -0.0203 0.0671 0.739 CD4_CTL L2
ENSG00000162402 USP24 -255561 sc-eQTL 9.82e-01 -0.00206 0.0922 0.739 CD4_CTL L2
ENSG00000243725 TTC4 243942 sc-eQTL 7.39e-01 0.0344 0.103 0.739 CD4_CTL L2
ENSG00000006555 TTC22 158480 sc-eQTL 1.42e-01 0.128 0.0866 0.737 CD4_Naive L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 5.48e-01 -0.0398 0.0662 0.737 CD4_Naive L2
ENSG00000116209 TMEM59 906299 sc-eQTL 1.80e-01 0.0862 0.0641 0.737 CD4_Naive L2
ENSG00000116221 MRPL37 775762 sc-eQTL 6.84e-01 -0.0338 0.083 0.737 CD4_Naive L2
ENSG00000157216 SSBP3 546324 sc-eQTL 5.12e-01 0.0435 0.0662 0.737 CD4_Naive L2
ENSG00000162402 USP24 -255561 sc-eQTL 8.86e-01 0.00821 0.0572 0.737 CD4_Naive L2
ENSG00000243725 TTC4 243942 sc-eQTL 2.27e-01 0.105 0.0868 0.737 CD4_Naive L2
ENSG00000006555 TTC22 158480 sc-eQTL 2.74e-02 0.202 0.0908 0.737 CD4_TCM L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 1.16e-01 -0.14 0.0889 0.737 CD4_TCM L2
ENSG00000116209 TMEM59 906299 sc-eQTL 3.38e-01 0.0646 0.0673 0.737 CD4_TCM L2
ENSG00000116221 MRPL37 775762 sc-eQTL 6.01e-01 -0.0444 0.0848 0.737 CD4_TCM L2
ENSG00000157216 SSBP3 546324 sc-eQTL 2.52e-02 0.185 0.0821 0.737 CD4_TCM L2
ENSG00000162402 USP24 -255561 sc-eQTL 4.53e-01 0.0517 0.0688 0.737 CD4_TCM L2
ENSG00000243725 TTC4 243942 sc-eQTL 4.06e-02 0.202 0.0983 0.737 CD4_TCM L2
ENSG00000006555 TTC22 158480 sc-eQTL 1.82e-01 -0.14 0.105 0.737 CD4_TEM L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 4.55e-01 -0.0745 0.0995 0.737 CD4_TEM L2
ENSG00000116209 TMEM59 906299 sc-eQTL 9.03e-01 -0.00944 0.0772 0.737 CD4_TEM L2
ENSG00000116221 MRPL37 775762 sc-eQTL 7.19e-01 0.0358 0.0993 0.737 CD4_TEM L2
ENSG00000157216 SSBP3 546324 sc-eQTL 2.33e-02 0.192 0.0842 0.737 CD4_TEM L2
ENSG00000162402 USP24 -255561 sc-eQTL 7.45e-01 0.0252 0.0775 0.737 CD4_TEM L2
ENSG00000243725 TTC4 243942 sc-eQTL 1.92e-02 0.239 0.101 0.737 CD4_TEM L2
ENSG00000006555 TTC22 158480 sc-eQTL 7.53e-01 0.0264 0.0836 0.737 CD8_CTL L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 3.09e-01 0.0943 0.0924 0.737 CD8_CTL L2
ENSG00000116209 TMEM59 906299 sc-eQTL 6.70e-01 -0.0344 0.0805 0.737 CD8_CTL L2
ENSG00000116221 MRPL37 775762 sc-eQTL 7.12e-01 -0.0352 0.0954 0.737 CD8_CTL L2
ENSG00000157216 SSBP3 546324 sc-eQTL 3.02e-01 -0.0673 0.0651 0.737 CD8_CTL L2
ENSG00000162402 USP24 -255561 sc-eQTL 4.96e-01 0.0442 0.0648 0.737 CD8_CTL L2
ENSG00000243725 TTC4 243942 sc-eQTL 2.96e-02 -0.21 0.096 0.737 CD8_CTL L2
ENSG00000006555 TTC22 158480 sc-eQTL 7.75e-01 -0.0272 0.0947 0.737 CD8_Naive L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 1.16e-01 -0.135 0.0852 0.737 CD8_Naive L2
ENSG00000116209 TMEM59 906299 sc-eQTL 9.27e-01 0.00772 0.0839 0.737 CD8_Naive L2
ENSG00000116221 MRPL37 775762 sc-eQTL 3.90e-02 0.207 0.0996 0.737 CD8_Naive L2
ENSG00000157216 SSBP3 546324 sc-eQTL 6.69e-01 0.0326 0.0761 0.737 CD8_Naive L2
ENSG00000162402 USP24 -255561 sc-eQTL 5.94e-01 0.037 0.0692 0.737 CD8_Naive L2
ENSG00000243725 TTC4 243942 sc-eQTL 2.97e-01 0.106 0.101 0.737 CD8_Naive L2
ENSG00000006555 TTC22 158480 sc-eQTL 3.52e-01 0.095 0.102 0.748 CD8_TCM L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 4.09e-01 0.0847 0.102 0.748 CD8_TCM L2
ENSG00000116209 TMEM59 906299 sc-eQTL 7.22e-01 -0.0322 0.0904 0.748 CD8_TCM L2
ENSG00000116221 MRPL37 775762 sc-eQTL 1.55e-01 -0.145 0.102 0.748 CD8_TCM L2
ENSG00000157216 SSBP3 546324 sc-eQTL 7.94e-01 0.0233 0.0889 0.748 CD8_TCM L2
ENSG00000162402 USP24 -255561 sc-eQTL 4.54e-01 -0.0646 0.0861 0.748 CD8_TCM L2
ENSG00000243725 TTC4 243942 sc-eQTL 1.18e-02 0.262 0.103 0.748 CD8_TCM L2
ENSG00000006555 TTC22 158480 sc-eQTL 6.78e-01 0.0407 0.0978 0.728 CD8_TEM L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 1.57e-01 -0.144 0.102 0.728 CD8_TEM L2
ENSG00000116209 TMEM59 906299 sc-eQTL 6.98e-01 -0.0383 0.0987 0.728 CD8_TEM L2
ENSG00000116221 MRPL37 775762 sc-eQTL 9.20e-01 0.01 0.1 0.728 CD8_TEM L2
ENSG00000157216 SSBP3 546324 sc-eQTL 3.85e-01 0.0822 0.0945 0.728 CD8_TEM L2
ENSG00000162402 USP24 -255561 sc-eQTL 3.45e-01 -0.0942 0.0995 0.728 CD8_TEM L2
ENSG00000243725 TTC4 243942 sc-eQTL 1.30e-01 0.153 0.101 0.728 CD8_TEM L2
ENSG00000006555 TTC22 158480 sc-eQTL 5.85e-02 0.175 0.0922 0.738 MAIT L2
ENSG00000116133 DHCR24 72608 sc-eQTL 3.44e-01 -0.0652 0.0687 0.738 MAIT L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 8.04e-01 0.024 0.0969 0.738 MAIT L2
ENSG00000116209 TMEM59 906299 sc-eQTL 3.70e-01 -0.0785 0.0874 0.738 MAIT L2
ENSG00000116221 MRPL37 775762 sc-eQTL 5.86e-01 -0.058 0.106 0.738 MAIT L2
ENSG00000157216 SSBP3 546324 sc-eQTL 5.91e-01 -0.0506 0.0942 0.738 MAIT L2
ENSG00000162402 USP24 -255561 sc-eQTL 3.13e-01 -0.0845 0.0835 0.738 MAIT L2
ENSG00000215883 CYB5RL 759767 sc-eQTL 3.73e-01 0.0867 0.0971 0.738 MAIT L2
ENSG00000243725 TTC4 243942 sc-eQTL 1.11e-01 -0.154 0.0961 0.738 MAIT L2
ENSG00000006555 TTC22 158480 sc-eQTL 2.04e-01 -0.132 0.103 0.738 NK_CD56bright L2
ENSG00000116133 DHCR24 72608 sc-eQTL 4.68e-01 0.0665 0.0914 0.738 NK_CD56bright L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 6.48e-01 0.0442 0.0967 0.738 NK_CD56bright L2
ENSG00000116209 TMEM59 906299 sc-eQTL 4.58e-01 0.07 0.0942 0.738 NK_CD56bright L2
ENSG00000116221 MRPL37 775762 sc-eQTL 6.18e-01 -0.0526 0.105 0.738 NK_CD56bright L2
ENSG00000157216 SSBP3 546324 sc-eQTL 3.39e-02 -0.168 0.0785 0.738 NK_CD56bright L2
ENSG00000162398 LEXM 153740 sc-eQTL 9.70e-01 0.00351 0.0938 0.738 NK_CD56bright L2
ENSG00000162402 USP24 -255561 sc-eQTL 6.89e-01 -0.0324 0.0807 0.738 NK_CD56bright L2
ENSG00000243725 TTC4 243942 sc-eQTL 5.71e-01 -0.0577 0.102 0.738 NK_CD56bright L2
ENSG00000006555 TTC22 158480 sc-eQTL 5.22e-01 0.0557 0.0867 0.735 NK_CD56dim L2
ENSG00000116133 DHCR24 72608 sc-eQTL 1.29e-03 0.288 0.0883 0.735 NK_CD56dim L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 3.15e-01 0.0984 0.0978 0.735 NK_CD56dim L2
ENSG00000116209 TMEM59 906299 sc-eQTL 1.06e-01 0.117 0.0723 0.735 NK_CD56dim L2
ENSG00000116221 MRPL37 775762 sc-eQTL 6.86e-01 0.0383 0.0945 0.735 NK_CD56dim L2
ENSG00000157216 SSBP3 546324 sc-eQTL 2.13e-02 -0.177 0.0764 0.735 NK_CD56dim L2
ENSG00000162398 LEXM 153740 sc-eQTL 5.28e-01 -0.0562 0.0889 0.735 NK_CD56dim L2
ENSG00000162402 USP24 -255561 sc-eQTL 3.92e-01 -0.0484 0.0565 0.735 NK_CD56dim L2
ENSG00000243725 TTC4 243942 sc-eQTL 7.79e-01 0.0273 0.0968 0.735 NK_CD56dim L2
ENSG00000006555 TTC22 158480 sc-eQTL 9.13e-01 0.0114 0.104 0.733 NK_HLA L2
ENSG00000116133 DHCR24 72608 sc-eQTL 9.34e-01 0.00839 0.101 0.733 NK_HLA L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 9.11e-01 -0.0109 0.0978 0.733 NK_HLA L2
ENSG00000116209 TMEM59 906299 sc-eQTL 4.40e-01 0.0751 0.097 0.733 NK_HLA L2
ENSG00000116221 MRPL37 775762 sc-eQTL 2.11e-01 0.134 0.107 0.733 NK_HLA L2
ENSG00000157216 SSBP3 546324 sc-eQTL 6.76e-01 -0.0366 0.0874 0.733 NK_HLA L2
ENSG00000162398 LEXM 153740 sc-eQTL 1.18e-01 0.154 0.098 0.733 NK_HLA L2
ENSG00000162402 USP24 -255561 sc-eQTL 5.06e-01 0.0482 0.0723 0.733 NK_HLA L2
ENSG00000243725 TTC4 243942 sc-eQTL 2.82e-01 -0.116 0.108 0.733 NK_HLA L2
ENSG00000006555 TTC22 158480 sc-eQTL 7.66e-01 0.0272 0.0913 0.735 NK_cytokine L2
ENSG00000116133 DHCR24 72608 sc-eQTL 3.10e-01 0.0937 0.0921 0.735 NK_cytokine L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 9.17e-01 -0.00962 0.0917 0.735 NK_cytokine L2
ENSG00000116209 TMEM59 906299 sc-eQTL 9.20e-01 0.00745 0.0745 0.735 NK_cytokine L2
ENSG00000116221 MRPL37 775762 sc-eQTL 4.46e-01 0.07 0.0917 0.735 NK_cytokine L2
ENSG00000157216 SSBP3 546324 sc-eQTL 1.83e-01 -0.103 0.0767 0.735 NK_cytokine L2
ENSG00000162398 LEXM 153740 sc-eQTL 1.27e-01 0.147 0.0957 0.735 NK_cytokine L2
ENSG00000162402 USP24 -255561 sc-eQTL 6.40e-02 0.121 0.0651 0.735 NK_cytokine L2
ENSG00000243725 TTC4 243942 sc-eQTL 2.78e-01 0.106 0.097 0.735 NK_cytokine L2
ENSG00000006555 TTC22 158480 sc-eQTL 8.01e-01 0.029 0.115 0.733 PB L2
ENSG00000116133 DHCR24 72608 sc-eQTL 1.54e-01 -0.144 0.101 0.733 PB L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 7.38e-01 -0.0414 0.124 0.733 PB L2
ENSG00000116209 TMEM59 906299 sc-eQTL 8.93e-01 -0.007 0.0517 0.733 PB L2
ENSG00000116221 MRPL37 775762 sc-eQTL 8.78e-01 -0.0144 0.094 0.733 PB L2
ENSG00000157216 SSBP3 546324 sc-eQTL 7.67e-01 -0.0322 0.109 0.733 PB L2
ENSG00000162402 USP24 -255561 sc-eQTL 4.47e-01 -0.0938 0.123 0.733 PB L2
ENSG00000215883 CYB5RL 759767 sc-eQTL 1.13e-01 -0.202 0.126 0.733 PB L2
ENSG00000243725 TTC4 243942 sc-eQTL 4.85e-01 -0.0834 0.119 0.733 PB L2
ENSG00000006555 TTC22 158480 sc-eQTL 7.14e-02 -0.167 0.0921 0.739 Pro_T L2
ENSG00000116133 DHCR24 72608 sc-eQTL 5.49e-01 -0.0472 0.0788 0.739 Pro_T L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 3.47e-01 -0.0905 0.0961 0.739 Pro_T L2
ENSG00000116209 TMEM59 906299 sc-eQTL 3.88e-01 0.0577 0.0667 0.739 Pro_T L2
ENSG00000116221 MRPL37 775762 sc-eQTL 2.54e-02 -0.146 0.0646 0.739 Pro_T L2
ENSG00000157216 SSBP3 546324 sc-eQTL 2.88e-01 -0.0779 0.0732 0.739 Pro_T L2
ENSG00000162402 USP24 -255561 sc-eQTL 4.43e-01 0.0687 0.0894 0.739 Pro_T L2
ENSG00000215883 CYB5RL 759767 sc-eQTL 9.51e-01 0.00548 0.0883 0.739 Pro_T L2
ENSG00000243725 TTC4 243942 sc-eQTL 4.01e-03 0.28 0.0963 0.739 Pro_T L2
ENSG00000006555 TTC22 158480 sc-eQTL 7.71e-01 0.0268 0.0922 0.737 Treg L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 9.84e-01 0.00194 0.0988 0.737 Treg L2
ENSG00000116209 TMEM59 906299 sc-eQTL 7.79e-01 -0.0219 0.0781 0.737 Treg L2
ENSG00000116221 MRPL37 775762 sc-eQTL 7.40e-01 -0.0321 0.0966 0.737 Treg L2
ENSG00000157216 SSBP3 546324 sc-eQTL 3.25e-01 -0.0849 0.086 0.737 Treg L2
ENSG00000162402 USP24 -255561 sc-eQTL 7.03e-02 0.148 0.0815 0.737 Treg L2
ENSG00000243725 TTC4 243942 sc-eQTL 6.53e-01 0.0466 0.103 0.737 Treg L2
ENSG00000116133 DHCR24 72608 sc-eQTL 4.18e-02 0.172 0.0837 0.734 cDC L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 8.50e-01 0.0189 0.0999 0.734 cDC L2
ENSG00000116209 TMEM59 906299 sc-eQTL 1.31e-01 -0.128 0.0843 0.734 cDC L2
ENSG00000116221 MRPL37 775762 sc-eQTL 7.63e-01 -0.0328 0.109 0.734 cDC L2
ENSG00000157216 SSBP3 546324 sc-eQTL 9.49e-01 0.0064 0.1 0.734 cDC L2
ENSG00000162390 ACOT11 417546 sc-eQTL 3.26e-01 -0.0914 0.0928 0.734 cDC L2
ENSG00000162402 USP24 -255561 sc-eQTL 8.62e-01 0.0182 0.104 0.734 cDC L2
ENSG00000215883 CYB5RL 759767 sc-eQTL 9.60e-02 -0.149 0.089 0.734 cDC L2
ENSG00000243725 TTC4 243942 sc-eQTL 1.54e-01 0.152 0.106 0.734 cDC L2
ENSG00000116133 DHCR24 72608 sc-eQTL 5.89e-01 0.0326 0.0602 0.737 cMono_IL1B L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 7.55e-02 0.148 0.083 0.737 cMono_IL1B L2
ENSG00000116209 TMEM59 906299 sc-eQTL 4.68e-01 0.0368 0.0507 0.737 cMono_IL1B L2
ENSG00000116221 MRPL37 775762 sc-eQTL 9.25e-01 0.00854 0.0904 0.737 cMono_IL1B L2
ENSG00000157216 SSBP3 546324 sc-eQTL 3.98e-02 -0.189 0.0913 0.737 cMono_IL1B L2
ENSG00000162402 USP24 -255561 sc-eQTL 4.78e-01 -0.0484 0.0681 0.737 cMono_IL1B L2
ENSG00000243725 TTC4 243942 sc-eQTL 6.01e-01 0.0545 0.104 0.737 cMono_IL1B L2
ENSG00000116133 DHCR24 72608 sc-eQTL 8.93e-01 0.00761 0.0565 0.737 cMono_S100A L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 8.59e-01 -0.0153 0.0862 0.737 cMono_S100A L2
ENSG00000116209 TMEM59 906299 sc-eQTL 2.58e-01 -0.078 0.0688 0.737 cMono_S100A L2
ENSG00000116221 MRPL37 775762 sc-eQTL 2.23e-02 0.227 0.0984 0.737 cMono_S100A L2
ENSG00000157216 SSBP3 546324 sc-eQTL 1.40e-01 -0.153 0.103 0.737 cMono_S100A L2
ENSG00000162402 USP24 -255561 sc-eQTL 8.25e-02 0.145 0.0831 0.737 cMono_S100A L2
ENSG00000243725 TTC4 243942 sc-eQTL 9.32e-01 -0.00892 0.105 0.737 cMono_S100A L2
ENSG00000006555 TTC22 158480 sc-eQTL 6.69e-01 -0.0406 0.0949 0.73 gdT L2
ENSG00000116133 DHCR24 72608 sc-eQTL 8.30e-01 -0.0228 0.106 0.73 gdT L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 4.18e-01 0.0861 0.106 0.73 gdT L2
ENSG00000116209 TMEM59 906299 sc-eQTL 4.22e-01 0.0867 0.108 0.73 gdT L2
ENSG00000116221 MRPL37 775762 sc-eQTL 2.15e-01 0.153 0.123 0.73 gdT L2
ENSG00000157216 SSBP3 546324 sc-eQTL 4.65e-01 -0.0554 0.0756 0.73 gdT L2
ENSG00000162402 USP24 -255561 sc-eQTL 4.65e-01 -0.0744 0.102 0.73 gdT L2
ENSG00000215883 CYB5RL 759767 sc-eQTL 2.90e-02 -0.229 0.104 0.73 gdT L2
ENSG00000243725 TTC4 243942 sc-eQTL 2.36e-01 -0.141 0.119 0.73 gdT L2
ENSG00000116133 DHCR24 72608 sc-eQTL 7.02e-01 0.0292 0.0762 0.738 intMono L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 1.69e-01 0.13 0.0945 0.738 intMono L2
ENSG00000116209 TMEM59 906299 sc-eQTL 9.33e-01 0.00583 0.0698 0.738 intMono L2
ENSG00000116221 MRPL37 775762 sc-eQTL 7.66e-01 0.0318 0.107 0.738 intMono L2
ENSG00000157216 SSBP3 546324 sc-eQTL 5.28e-03 -0.301 0.107 0.738 intMono L2
ENSG00000162402 USP24 -255561 sc-eQTL 8.07e-01 0.0237 0.0972 0.738 intMono L2
ENSG00000243725 TTC4 243942 sc-eQTL 4.41e-01 0.0797 0.103 0.738 intMono L2
ENSG00000116133 DHCR24 72608 sc-eQTL 9.74e-01 0.0025 0.0752 0.731 ncMono L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 1.27e-01 -0.143 0.0935 0.731 ncMono L2
ENSG00000116209 TMEM59 906299 sc-eQTL 5.34e-01 -0.0469 0.0752 0.731 ncMono L2
ENSG00000116221 MRPL37 775762 sc-eQTL 4.02e-02 0.198 0.096 0.731 ncMono L2
ENSG00000157216 SSBP3 546324 sc-eQTL 1.06e-01 -0.171 0.105 0.731 ncMono L2
ENSG00000162402 USP24 -255561 sc-eQTL 7.93e-01 -0.0223 0.0848 0.731 ncMono L2
ENSG00000243725 TTC4 243942 sc-eQTL 1.61e-01 0.141 0.0999 0.731 ncMono L2
ENSG00000116133 DHCR24 72608 sc-eQTL 8.52e-01 -0.0168 0.0901 0.743 pDC L2
ENSG00000116205 TCEANC2 906219 sc-eQTL 5.02e-01 -0.0727 0.108 0.743 pDC L2
ENSG00000116209 TMEM59 906299 sc-eQTL 3.90e-01 0.0742 0.0861 0.743 pDC L2
ENSG00000116221 MRPL37 775762 sc-eQTL 7.20e-01 -0.0412 0.115 0.743 pDC L2
ENSG00000157216 SSBP3 546324 sc-eQTL 1.79e-01 0.137 0.101 0.743 pDC L2
ENSG00000162390 ACOT11 417546 sc-eQTL 8.10e-01 -0.0103 0.0428 0.743 pDC L2
ENSG00000162402 USP24 -255561 sc-eQTL 4.74e-01 0.0519 0.0722 0.743 pDC L2
ENSG00000215883 CYB5RL 759767 sc-eQTL 5.18e-01 0.064 0.0987 0.743 pDC L2
ENSG00000243725 TTC4 243942 sc-eQTL 6.81e-01 -0.0469 0.114 0.743 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 158480 sc-eQTL 1.48e-01 -0.139 0.0959 0.737 B_Memory LOneK1K
ENSG00000116133 DHCR24 72608 sc-eQTL 3.20e-01 0.0962 0.0965 0.737 B_Memory LOneK1K
ENSG00000116205 TCEANC2 906219 sc-eQTL 5.45e-01 0.0566 0.0934 0.737 B_Memory LOneK1K
ENSG00000116209 TMEM59 906299 sc-eQTL 2.11e-01 -0.0909 0.0724 0.737 B_Memory LOneK1K
ENSG00000116221 MRPL37 775762 sc-eQTL 3.14e-02 -0.187 0.0861 0.737 B_Memory LOneK1K
ENSG00000157216 SSBP3 546324 sc-eQTL 5.47e-01 0.0457 0.0757 0.737 B_Memory LOneK1K
ENSG00000162402 USP24 -255561 sc-eQTL 1.35e-01 0.103 0.0687 0.737 B_Memory LOneK1K
ENSG00000215883 CYB5RL 759767 sc-eQTL 9.88e-01 0.00164 0.106 0.737 B_Memory LOneK1K
ENSG00000243725 TTC4 243942 sc-eQTL 2.00e-01 -0.122 0.0949 0.737 B_Memory LOneK1K
ENSG00000006555 TTC22 158480 sc-eQTL 6.45e-01 0.0476 0.103 0.737 B_Naive LOneK1K
ENSG00000116133 DHCR24 72608 sc-eQTL 1.03e-01 0.152 0.0924 0.737 B_Naive LOneK1K
ENSG00000116205 TCEANC2 906219 sc-eQTL 2.41e-01 0.0985 0.0838 0.737 B_Naive LOneK1K
ENSG00000116209 TMEM59 906299 sc-eQTL 6.92e-01 0.0237 0.0597 0.737 B_Naive LOneK1K
ENSG00000116221 MRPL37 775762 sc-eQTL 3.61e-01 0.0785 0.0857 0.737 B_Naive LOneK1K
ENSG00000157216 SSBP3 546324 sc-eQTL 1.72e-01 -0.105 0.0765 0.737 B_Naive LOneK1K
ENSG00000162402 USP24 -255561 sc-eQTL 8.15e-01 -0.0154 0.0659 0.737 B_Naive LOneK1K
ENSG00000215883 CYB5RL 759767 sc-eQTL 5.04e-04 -0.358 0.101 0.737 B_Naive LOneK1K
ENSG00000243725 TTC4 243942 sc-eQTL 7.36e-01 0.0332 0.0981 0.737 B_Naive LOneK1K
ENSG00000116133 DHCR24 72608 sc-eQTL 8.10e-01 0.0142 0.059 0.737 CD14_Mono LOneK1K
ENSG00000116205 TCEANC2 906219 sc-eQTL 3.40e-01 0.0705 0.0737 0.737 CD14_Mono LOneK1K
ENSG00000116209 TMEM59 906299 sc-eQTL 7.41e-01 -0.0168 0.0509 0.737 CD14_Mono LOneK1K
ENSG00000116221 MRPL37 775762 sc-eQTL 1.87e-01 0.119 0.0898 0.737 CD14_Mono LOneK1K
ENSG00000157216 SSBP3 546324 sc-eQTL 8.83e-03 -0.245 0.0929 0.737 CD14_Mono LOneK1K
ENSG00000162402 USP24 -255561 sc-eQTL 9.07e-01 0.00756 0.0645 0.737 CD14_Mono LOneK1K
ENSG00000243725 TTC4 243942 sc-eQTL 7.13e-01 0.0393 0.107 0.737 CD14_Mono LOneK1K
ENSG00000116133 DHCR24 72608 sc-eQTL 9.04e-01 -0.00859 0.0712 0.735 CD16_Mono LOneK1K
ENSG00000116205 TCEANC2 906219 sc-eQTL 6.91e-01 -0.0372 0.0935 0.735 CD16_Mono LOneK1K
ENSG00000116209 TMEM59 906299 sc-eQTL 5.88e-01 -0.0377 0.0695 0.735 CD16_Mono LOneK1K
ENSG00000116221 MRPL37 775762 sc-eQTL 7.52e-02 0.169 0.0946 0.735 CD16_Mono LOneK1K
ENSG00000157216 SSBP3 546324 sc-eQTL 6.20e-03 -0.276 0.0999 0.735 CD16_Mono LOneK1K
ENSG00000162402 USP24 -255561 sc-eQTL 9.73e-01 0.00275 0.0801 0.735 CD16_Mono LOneK1K
ENSG00000243725 TTC4 243942 sc-eQTL 1.50e-01 0.144 0.1 0.735 CD16_Mono LOneK1K
ENSG00000006555 TTC22 158480 sc-eQTL 7.54e-01 0.0265 0.0845 0.735 NK_CD56dim LOneK1K
ENSG00000116133 DHCR24 72608 sc-eQTL 6.46e-03 0.238 0.0867 0.735 NK_CD56dim LOneK1K
ENSG00000116205 TCEANC2 906219 sc-eQTL 6.08e-01 0.0444 0.0865 0.735 NK_CD56dim LOneK1K
ENSG00000116209 TMEM59 906299 sc-eQTL 2.02e-01 0.0854 0.0667 0.735 NK_CD56dim LOneK1K
ENSG00000116221 MRPL37 775762 sc-eQTL 1.70e-01 0.123 0.0893 0.735 NK_CD56dim LOneK1K
ENSG00000157216 SSBP3 546324 sc-eQTL 2.42e-02 -0.165 0.0727 0.735 NK_CD56dim LOneK1K
ENSG00000162398 LEXM 153740 sc-eQTL 7.28e-01 0.0289 0.0829 0.735 NK_CD56dim LOneK1K
ENSG00000162402 USP24 -255561 sc-eQTL 4.34e-01 0.0412 0.0525 0.735 NK_CD56dim LOneK1K
ENSG00000243725 TTC4 243942 sc-eQTL 6.00e-01 0.0492 0.0936 0.735 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000234810 \N -369485 1.27e-06 2.19e-06 3.43e-07 1.7e-06 2.79e-07 6.73e-07 1.3e-06 3.54e-07 1.74e-06 5.86e-07 1.86e-06 8.93e-07 2.61e-06 8.7e-07 4.37e-07 9.2e-07 1.11e-06 1.08e-06 8.2e-07 6.4e-07 6.81e-07 1.75e-06 9.73e-07 5.74e-07 2.41e-06 6.52e-07 9.45e-07 7.25e-07 1.59e-06 1.29e-06 7.56e-07 4.5e-08 9.46e-08 6.58e-07 8.75e-07 1.82e-07 4.13e-07 1.25e-07 4.18e-07 1.17e-07 1.14e-07 2.77e-06 5.66e-08 1.75e-07 2.8e-07 1.71e-07 1.97e-07 2.48e-08 6.04e-08