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Genes within 1Mb (chr1:54954664:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 153341 sc-eQTL 6.14e-01 -0.0481 0.0954 0.739 B L1
ENSG00000116133 DHCR24 67469 sc-eQTL 6.87e-01 0.0363 0.0902 0.739 B L1
ENSG00000116205 TCEANC2 901080 sc-eQTL 7.40e-02 0.139 0.0773 0.739 B L1
ENSG00000116209 TMEM59 901160 sc-eQTL 3.77e-01 -0.0419 0.0474 0.739 B L1
ENSG00000116221 MRPL37 770623 sc-eQTL 7.67e-01 -0.0184 0.0621 0.739 B L1
ENSG00000157216 SSBP3 541185 sc-eQTL 5.77e-01 0.0363 0.065 0.739 B L1
ENSG00000162402 USP24 -260700 sc-eQTL 1.59e-01 0.0774 0.0548 0.739 B L1
ENSG00000215883 CYB5RL 754628 sc-eQTL 9.49e-02 -0.177 0.105 0.739 B L1
ENSG00000243725 TTC4 238803 sc-eQTL 8.80e-01 0.014 0.0923 0.739 B L1
ENSG00000006555 TTC22 153341 sc-eQTL 5.75e-02 0.141 0.0736 0.739 CD4T L1
ENSG00000116205 TCEANC2 901080 sc-eQTL 1.95e-01 -0.0786 0.0605 0.739 CD4T L1
ENSG00000116209 TMEM59 901160 sc-eQTL 3.75e-01 0.0502 0.0565 0.739 CD4T L1
ENSG00000116221 MRPL37 770623 sc-eQTL 3.59e-01 -0.0717 0.078 0.739 CD4T L1
ENSG00000157216 SSBP3 541185 sc-eQTL 7.69e-02 0.115 0.0645 0.739 CD4T L1
ENSG00000162402 USP24 -260700 sc-eQTL 3.03e-01 0.0545 0.0528 0.739 CD4T L1
ENSG00000243725 TTC4 238803 sc-eQTL 2.02e-02 0.184 0.0786 0.739 CD4T L1
ENSG00000006555 TTC22 153341 sc-eQTL 3.96e-01 0.0551 0.0648 0.739 CD8T L1
ENSG00000116205 TCEANC2 901080 sc-eQTL 9.79e-01 -0.00212 0.0808 0.739 CD8T L1
ENSG00000116209 TMEM59 901160 sc-eQTL 7.25e-01 0.0198 0.0561 0.739 CD8T L1
ENSG00000116221 MRPL37 770623 sc-eQTL 4.61e-01 0.0569 0.0771 0.739 CD8T L1
ENSG00000157216 SSBP3 541185 sc-eQTL 9.77e-01 -0.00162 0.0555 0.739 CD8T L1
ENSG00000162402 USP24 -260700 sc-eQTL 9.70e-01 0.00203 0.0537 0.739 CD8T L1
ENSG00000243725 TTC4 238803 sc-eQTL 5.65e-01 0.0536 0.093 0.739 CD8T L1
ENSG00000116133 DHCR24 67469 sc-eQTL 1.42e-01 0.126 0.0857 0.741 DC L1
ENSG00000116205 TCEANC2 901080 sc-eQTL 7.65e-01 -0.0289 0.0966 0.741 DC L1
ENSG00000116209 TMEM59 901160 sc-eQTL 7.36e-01 -0.0257 0.0759 0.741 DC L1
ENSG00000116221 MRPL37 770623 sc-eQTL 5.87e-01 -0.0555 0.102 0.741 DC L1
ENSG00000157216 SSBP3 541185 sc-eQTL 2.96e-01 0.095 0.0907 0.741 DC L1
ENSG00000162390 ACOT11 412407 sc-eQTL 6.41e-01 -0.0408 0.0874 0.741 DC L1
ENSG00000162402 USP24 -260700 sc-eQTL 4.90e-01 0.0364 0.0527 0.741 DC L1
ENSG00000215883 CYB5RL 754628 sc-eQTL 9.61e-02 -0.158 0.0947 0.741 DC L1
ENSG00000243725 TTC4 238803 sc-eQTL 2.85e-01 0.11 0.102 0.741 DC L1
ENSG00000116133 DHCR24 67469 sc-eQTL 5.81e-01 0.0346 0.0626 0.739 Mono L1
ENSG00000116205 TCEANC2 901080 sc-eQTL 7.14e-01 0.0249 0.0676 0.739 Mono L1
ENSG00000116209 TMEM59 901160 sc-eQTL 5.60e-01 -0.0293 0.0502 0.739 Mono L1
ENSG00000116221 MRPL37 770623 sc-eQTL 1.01e-01 0.138 0.0835 0.739 Mono L1
ENSG00000157216 SSBP3 541185 sc-eQTL 1.84e-03 -0.297 0.0941 0.739 Mono L1
ENSG00000162402 USP24 -260700 sc-eQTL 9.67e-01 -0.00241 0.0574 0.739 Mono L1
ENSG00000243725 TTC4 238803 sc-eQTL 2.68e-01 0.112 0.101 0.739 Mono L1
ENSG00000006555 TTC22 153341 sc-eQTL 9.04e-01 0.0103 0.0853 0.738 NK L1
ENSG00000116133 DHCR24 67469 sc-eQTL 8.33e-03 0.226 0.0847 0.738 NK L1
ENSG00000116205 TCEANC2 901080 sc-eQTL 4.60e-01 0.0629 0.0848 0.738 NK L1
ENSG00000116209 TMEM59 901160 sc-eQTL 3.10e-01 0.0676 0.0664 0.738 NK L1
ENSG00000116221 MRPL37 770623 sc-eQTL 3.57e-01 0.0762 0.0826 0.738 NK L1
ENSG00000157216 SSBP3 541185 sc-eQTL 2.52e-02 -0.16 0.0709 0.738 NK L1
ENSG00000162398 LEXM 148601 sc-eQTL 7.80e-01 -0.0225 0.0805 0.738 NK L1
ENSG00000162402 USP24 -260700 sc-eQTL 5.38e-01 0.0301 0.0488 0.738 NK L1
ENSG00000243725 TTC4 238803 sc-eQTL 7.20e-01 0.0332 0.0923 0.738 NK L1
ENSG00000006555 TTC22 153341 sc-eQTL 4.53e-01 0.0565 0.0751 0.739 Other_T L1
ENSG00000116133 DHCR24 67469 sc-eQTL 6.07e-01 -0.0301 0.0583 0.739 Other_T L1
ENSG00000116205 TCEANC2 901080 sc-eQTL 6.77e-01 0.0364 0.0873 0.739 Other_T L1
ENSG00000116209 TMEM59 901160 sc-eQTL 8.84e-01 -0.00878 0.0599 0.739 Other_T L1
ENSG00000116221 MRPL37 770623 sc-eQTL 2.28e-01 -0.0676 0.0559 0.739 Other_T L1
ENSG00000157216 SSBP3 541185 sc-eQTL 6.83e-01 -0.0265 0.0649 0.739 Other_T L1
ENSG00000162402 USP24 -260700 sc-eQTL 5.66e-01 -0.0397 0.0691 0.739 Other_T L1
ENSG00000215883 CYB5RL 754628 sc-eQTL 2.65e-01 0.105 0.0942 0.739 Other_T L1
ENSG00000243725 TTC4 238803 sc-eQTL 6.51e-01 0.0426 0.0941 0.739 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 153341 sc-eQTL 5.70e-01 -0.0459 0.0806 0.727 B_Activated L2
ENSG00000116133 DHCR24 67469 sc-eQTL 3.58e-01 0.0871 0.0946 0.727 B_Activated L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 5.92e-01 -0.0546 0.102 0.727 B_Activated L2
ENSG00000116209 TMEM59 901160 sc-eQTL 7.47e-01 -0.035 0.108 0.727 B_Activated L2
ENSG00000116221 MRPL37 770623 sc-eQTL 3.53e-01 -0.108 0.117 0.727 B_Activated L2
ENSG00000157216 SSBP3 541185 sc-eQTL 4.98e-01 -0.0717 0.106 0.727 B_Activated L2
ENSG00000162402 USP24 -260700 sc-eQTL 4.44e-02 0.207 0.102 0.727 B_Activated L2
ENSG00000215883 CYB5RL 754628 sc-eQTL 5.06e-01 -0.0606 0.091 0.727 B_Activated L2
ENSG00000243725 TTC4 238803 sc-eQTL 3.93e-01 -0.0844 0.0986 0.727 B_Activated L2
ENSG00000006555 TTC22 153341 sc-eQTL 3.32e-01 -0.0987 0.101 0.738 B_Intermediate L2
ENSG00000116133 DHCR24 67469 sc-eQTL 4.27e-01 0.0749 0.0942 0.738 B_Intermediate L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 7.38e-01 -0.0314 0.0939 0.738 B_Intermediate L2
ENSG00000116209 TMEM59 901160 sc-eQTL 2.64e-01 -0.0898 0.0802 0.738 B_Intermediate L2
ENSG00000116221 MRPL37 770623 sc-eQTL 1.30e-01 -0.143 0.0941 0.738 B_Intermediate L2
ENSG00000157216 SSBP3 541185 sc-eQTL 2.13e-01 0.11 0.0881 0.738 B_Intermediate L2
ENSG00000162402 USP24 -260700 sc-eQTL 4.95e-01 0.0509 0.0744 0.738 B_Intermediate L2
ENSG00000215883 CYB5RL 754628 sc-eQTL 5.61e-01 0.0614 0.105 0.738 B_Intermediate L2
ENSG00000243725 TTC4 238803 sc-eQTL 9.37e-01 -0.00762 0.0958 0.738 B_Intermediate L2
ENSG00000006555 TTC22 153341 sc-eQTL 7.25e-01 -0.0344 0.0975 0.739 B_Memory L2
ENSG00000116133 DHCR24 67469 sc-eQTL 7.07e-01 -0.0364 0.0967 0.739 B_Memory L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 4.54e-02 0.206 0.103 0.739 B_Memory L2
ENSG00000116209 TMEM59 901160 sc-eQTL 2.24e-01 -0.105 0.086 0.739 B_Memory L2
ENSG00000116221 MRPL37 770623 sc-eQTL 4.35e-01 -0.0683 0.0873 0.739 B_Memory L2
ENSG00000157216 SSBP3 541185 sc-eQTL 8.36e-01 -0.0169 0.0816 0.739 B_Memory L2
ENSG00000162402 USP24 -260700 sc-eQTL 6.52e-01 0.0361 0.0798 0.739 B_Memory L2
ENSG00000215883 CYB5RL 754628 sc-eQTL 9.94e-01 -0.000802 0.0987 0.739 B_Memory L2
ENSG00000243725 TTC4 238803 sc-eQTL 4.43e-01 -0.0784 0.102 0.739 B_Memory L2
ENSG00000006555 TTC22 153341 sc-eQTL 3.64e-01 -0.0932 0.103 0.739 B_Naive1 L2
ENSG00000116133 DHCR24 67469 sc-eQTL 4.03e-01 0.0805 0.0962 0.739 B_Naive1 L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 2.56e-01 0.0976 0.0856 0.739 B_Naive1 L2
ENSG00000116209 TMEM59 901160 sc-eQTL 6.68e-01 0.0268 0.0624 0.739 B_Naive1 L2
ENSG00000116221 MRPL37 770623 sc-eQTL 1.54e-01 0.131 0.0916 0.739 B_Naive1 L2
ENSG00000157216 SSBP3 541185 sc-eQTL 9.70e-01 -0.00325 0.0877 0.739 B_Naive1 L2
ENSG00000162402 USP24 -260700 sc-eQTL 5.57e-01 0.0406 0.069 0.739 B_Naive1 L2
ENSG00000215883 CYB5RL 754628 sc-eQTL 1.06e-01 -0.168 0.104 0.739 B_Naive1 L2
ENSG00000243725 TTC4 238803 sc-eQTL 5.98e-01 0.0496 0.094 0.739 B_Naive1 L2
ENSG00000006555 TTC22 153341 sc-eQTL 1.97e-01 0.131 0.101 0.74 B_Naive2 L2
ENSG00000116133 DHCR24 67469 sc-eQTL 3.96e-01 0.075 0.0882 0.74 B_Naive2 L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 8.57e-01 -0.0177 0.098 0.74 B_Naive2 L2
ENSG00000116209 TMEM59 901160 sc-eQTL 7.62e-01 -0.0245 0.0807 0.74 B_Naive2 L2
ENSG00000116221 MRPL37 770623 sc-eQTL 4.85e-01 0.0664 0.0949 0.74 B_Naive2 L2
ENSG00000157216 SSBP3 541185 sc-eQTL 1.20e-01 -0.145 0.0931 0.74 B_Naive2 L2
ENSG00000162402 USP24 -260700 sc-eQTL 9.65e-01 0.0033 0.0742 0.74 B_Naive2 L2
ENSG00000215883 CYB5RL 754628 sc-eQTL 3.83e-02 -0.215 0.103 0.74 B_Naive2 L2
ENSG00000243725 TTC4 238803 sc-eQTL 6.96e-01 0.0424 0.109 0.74 B_Naive2 L2
ENSG00000006555 TTC22 153341 sc-eQTL 9.34e-01 0.00789 0.0945 0.741 CD4_CTL L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 2.16e-01 0.12 0.0969 0.741 CD4_CTL L2
ENSG00000116209 TMEM59 901160 sc-eQTL 3.81e-01 -0.0775 0.0883 0.741 CD4_CTL L2
ENSG00000116221 MRPL37 770623 sc-eQTL 3.47e-01 -0.102 0.109 0.741 CD4_CTL L2
ENSG00000157216 SSBP3 541185 sc-eQTL 7.99e-01 -0.017 0.0669 0.741 CD4_CTL L2
ENSG00000162402 USP24 -260700 sc-eQTL 9.46e-01 -0.00623 0.0919 0.741 CD4_CTL L2
ENSG00000243725 TTC4 238803 sc-eQTL 7.43e-01 0.0338 0.103 0.741 CD4_CTL L2
ENSG00000006555 TTC22 153341 sc-eQTL 2.20e-01 0.107 0.0869 0.739 CD4_Naive L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 4.99e-01 -0.0449 0.0663 0.739 CD4_Naive L2
ENSG00000116209 TMEM59 901160 sc-eQTL 2.24e-01 0.0785 0.0643 0.739 CD4_Naive L2
ENSG00000116221 MRPL37 770623 sc-eQTL 6.01e-01 -0.0436 0.0831 0.739 CD4_Naive L2
ENSG00000157216 SSBP3 541185 sc-eQTL 4.68e-01 0.0482 0.0663 0.739 CD4_Naive L2
ENSG00000162402 USP24 -260700 sc-eQTL 9.74e-01 0.00185 0.0573 0.739 CD4_Naive L2
ENSG00000243725 TTC4 238803 sc-eQTL 2.04e-01 0.111 0.087 0.739 CD4_Naive L2
ENSG00000006555 TTC22 153341 sc-eQTL 4.69e-02 0.183 0.0914 0.739 CD4_TCM L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 8.82e-02 -0.153 0.0891 0.739 CD4_TCM L2
ENSG00000116209 TMEM59 901160 sc-eQTL 3.80e-01 0.0594 0.0676 0.739 CD4_TCM L2
ENSG00000116221 MRPL37 770623 sc-eQTL 5.25e-01 -0.0542 0.0851 0.739 CD4_TCM L2
ENSG00000157216 SSBP3 541185 sc-eQTL 2.68e-02 0.184 0.0825 0.739 CD4_TCM L2
ENSG00000162402 USP24 -260700 sc-eQTL 5.87e-01 0.0377 0.0691 0.739 CD4_TCM L2
ENSG00000243725 TTC4 238803 sc-eQTL 4.44e-02 0.2 0.0987 0.739 CD4_TCM L2
ENSG00000006555 TTC22 153341 sc-eQTL 1.80e-01 -0.142 0.106 0.739 CD4_TEM L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 5.43e-01 -0.0613 0.101 0.739 CD4_TEM L2
ENSG00000116209 TMEM59 901160 sc-eQTL 6.96e-01 -0.0305 0.078 0.739 CD4_TEM L2
ENSG00000116221 MRPL37 770623 sc-eQTL 7.54e-01 0.0316 0.1 0.739 CD4_TEM L2
ENSG00000157216 SSBP3 541185 sc-eQTL 1.82e-02 0.202 0.085 0.739 CD4_TEM L2
ENSG00000162402 USP24 -260700 sc-eQTL 6.77e-01 0.0327 0.0783 0.739 CD4_TEM L2
ENSG00000243725 TTC4 238803 sc-eQTL 1.14e-02 0.26 0.102 0.739 CD4_TEM L2
ENSG00000006555 TTC22 153341 sc-eQTL 9.43e-01 0.00592 0.0834 0.739 CD8_CTL L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 2.77e-01 0.1 0.0921 0.739 CD8_CTL L2
ENSG00000116209 TMEM59 901160 sc-eQTL 5.80e-01 -0.0445 0.0803 0.739 CD8_CTL L2
ENSG00000116221 MRPL37 770623 sc-eQTL 7.44e-01 -0.0311 0.0951 0.739 CD8_CTL L2
ENSG00000157216 SSBP3 541185 sc-eQTL 2.41e-01 -0.0762 0.0648 0.739 CD8_CTL L2
ENSG00000162402 USP24 -260700 sc-eQTL 4.34e-01 0.0507 0.0646 0.739 CD8_CTL L2
ENSG00000243725 TTC4 238803 sc-eQTL 3.50e-02 -0.203 0.0958 0.739 CD8_CTL L2
ENSG00000006555 TTC22 153341 sc-eQTL 6.98e-01 -0.0367 0.0946 0.739 CD8_Naive L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 1.30e-01 -0.129 0.0852 0.739 CD8_Naive L2
ENSG00000116209 TMEM59 901160 sc-eQTL 9.02e-01 0.0103 0.0838 0.739 CD8_Naive L2
ENSG00000116221 MRPL37 770623 sc-eQTL 3.57e-02 0.21 0.0995 0.739 CD8_Naive L2
ENSG00000157216 SSBP3 541185 sc-eQTL 6.89e-01 0.0305 0.076 0.739 CD8_Naive L2
ENSG00000162402 USP24 -260700 sc-eQTL 6.49e-01 0.0315 0.0691 0.739 CD8_Naive L2
ENSG00000243725 TTC4 238803 sc-eQTL 3.84e-01 0.088 0.101 0.739 CD8_Naive L2
ENSG00000006555 TTC22 153341 sc-eQTL 3.52e-01 0.095 0.102 0.748 CD8_TCM L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 4.09e-01 0.0847 0.102 0.748 CD8_TCM L2
ENSG00000116209 TMEM59 901160 sc-eQTL 7.22e-01 -0.0322 0.0904 0.748 CD8_TCM L2
ENSG00000116221 MRPL37 770623 sc-eQTL 1.55e-01 -0.145 0.102 0.748 CD8_TCM L2
ENSG00000157216 SSBP3 541185 sc-eQTL 7.94e-01 0.0233 0.0889 0.748 CD8_TCM L2
ENSG00000162402 USP24 -260700 sc-eQTL 4.54e-01 -0.0646 0.0861 0.748 CD8_TCM L2
ENSG00000243725 TTC4 238803 sc-eQTL 1.18e-02 0.262 0.103 0.748 CD8_TCM L2
ENSG00000006555 TTC22 153341 sc-eQTL 6.98e-01 0.0378 0.0973 0.731 CD8_TEM L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 2.19e-01 -0.125 0.101 0.731 CD8_TEM L2
ENSG00000116209 TMEM59 901160 sc-eQTL 6.35e-01 -0.0468 0.0982 0.731 CD8_TEM L2
ENSG00000116221 MRPL37 770623 sc-eQTL 9.15e-01 0.0107 0.0996 0.731 CD8_TEM L2
ENSG00000157216 SSBP3 541185 sc-eQTL 4.57e-01 0.07 0.094 0.731 CD8_TEM L2
ENSG00000162402 USP24 -260700 sc-eQTL 2.87e-01 -0.106 0.099 0.731 CD8_TEM L2
ENSG00000243725 TTC4 238803 sc-eQTL 1.01e-01 0.165 0.1 0.731 CD8_TEM L2
ENSG00000006555 TTC22 153341 sc-eQTL 5.34e-02 0.179 0.0923 0.74 MAIT L2
ENSG00000116133 DHCR24 67469 sc-eQTL 4.90e-01 -0.0476 0.0688 0.74 MAIT L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 7.04e-01 0.0368 0.097 0.74 MAIT L2
ENSG00000116209 TMEM59 901160 sc-eQTL 3.41e-01 -0.0835 0.0875 0.74 MAIT L2
ENSG00000116221 MRPL37 770623 sc-eQTL 5.84e-01 -0.0584 0.106 0.74 MAIT L2
ENSG00000157216 SSBP3 541185 sc-eQTL 4.67e-01 -0.0687 0.0943 0.74 MAIT L2
ENSG00000162402 USP24 -260700 sc-eQTL 3.38e-01 -0.0804 0.0837 0.74 MAIT L2
ENSG00000215883 CYB5RL 754628 sc-eQTL 4.32e-01 0.0766 0.0973 0.74 MAIT L2
ENSG00000243725 TTC4 238803 sc-eQTL 1.45e-01 -0.141 0.0964 0.74 MAIT L2
ENSG00000006555 TTC22 153341 sc-eQTL 1.97e-01 -0.133 0.103 0.74 NK_CD56bright L2
ENSG00000116133 DHCR24 67469 sc-eQTL 5.57e-01 0.0538 0.0913 0.74 NK_CD56bright L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 6.05e-01 0.0499 0.0965 0.74 NK_CD56bright L2
ENSG00000116209 TMEM59 901160 sc-eQTL 5.56e-01 0.0555 0.0941 0.74 NK_CD56bright L2
ENSG00000116221 MRPL37 770623 sc-eQTL 6.37e-01 -0.0496 0.105 0.74 NK_CD56bright L2
ENSG00000157216 SSBP3 541185 sc-eQTL 1.98e-02 -0.184 0.0782 0.74 NK_CD56bright L2
ENSG00000162398 LEXM 148601 sc-eQTL 9.69e-01 -0.0036 0.0936 0.74 NK_CD56bright L2
ENSG00000162402 USP24 -260700 sc-eQTL 7.67e-01 -0.0239 0.0806 0.74 NK_CD56bright L2
ENSG00000243725 TTC4 238803 sc-eQTL 6.12e-01 -0.0516 0.102 0.74 NK_CD56bright L2
ENSG00000006555 TTC22 153341 sc-eQTL 5.67e-01 0.0497 0.0867 0.737 NK_CD56dim L2
ENSG00000116133 DHCR24 67469 sc-eQTL 9.38e-04 0.296 0.0882 0.737 NK_CD56dim L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 3.40e-01 0.0936 0.0978 0.737 NK_CD56dim L2
ENSG00000116209 TMEM59 901160 sc-eQTL 1.13e-01 0.115 0.0722 0.737 NK_CD56dim L2
ENSG00000116221 MRPL37 770623 sc-eQTL 6.02e-01 0.0494 0.0945 0.737 NK_CD56dim L2
ENSG00000157216 SSBP3 541185 sc-eQTL 1.49e-02 -0.187 0.0763 0.737 NK_CD56dim L2
ENSG00000162398 LEXM 148601 sc-eQTL 4.57e-01 -0.0663 0.0889 0.737 NK_CD56dim L2
ENSG00000162402 USP24 -260700 sc-eQTL 4.07e-01 -0.0469 0.0565 0.737 NK_CD56dim L2
ENSG00000243725 TTC4 238803 sc-eQTL 8.24e-01 0.0215 0.0968 0.737 NK_CD56dim L2
ENSG00000006555 TTC22 153341 sc-eQTL 9.97e-01 -0.000391 0.104 0.735 NK_HLA L2
ENSG00000116133 DHCR24 67469 sc-eQTL 9.62e-01 -0.00479 0.101 0.735 NK_HLA L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 8.52e-01 -0.0182 0.0977 0.735 NK_HLA L2
ENSG00000116209 TMEM59 901160 sc-eQTL 3.56e-01 0.0896 0.0968 0.735 NK_HLA L2
ENSG00000116221 MRPL37 770623 sc-eQTL 2.50e-01 0.123 0.107 0.735 NK_HLA L2
ENSG00000157216 SSBP3 541185 sc-eQTL 6.63e-01 -0.0381 0.0872 0.735 NK_HLA L2
ENSG00000162398 LEXM 148601 sc-eQTL 1.84e-01 0.131 0.098 0.735 NK_HLA L2
ENSG00000162402 USP24 -260700 sc-eQTL 5.99e-01 0.0381 0.0722 0.735 NK_HLA L2
ENSG00000243725 TTC4 238803 sc-eQTL 2.39e-01 -0.127 0.107 0.735 NK_HLA L2
ENSG00000006555 TTC22 153341 sc-eQTL 7.73e-01 0.0264 0.0912 0.737 NK_cytokine L2
ENSG00000116133 DHCR24 67469 sc-eQTL 2.46e-01 0.107 0.0919 0.737 NK_cytokine L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 9.48e-01 0.00593 0.0916 0.737 NK_cytokine L2
ENSG00000116209 TMEM59 901160 sc-eQTL 9.77e-01 0.00213 0.0744 0.737 NK_cytokine L2
ENSG00000116221 MRPL37 770623 sc-eQTL 4.43e-01 0.0704 0.0916 0.737 NK_cytokine L2
ENSG00000157216 SSBP3 541185 sc-eQTL 1.09e-01 -0.123 0.0765 0.737 NK_cytokine L2
ENSG00000162398 LEXM 148601 sc-eQTL 2.14e-01 0.119 0.0958 0.737 NK_cytokine L2
ENSG00000162402 USP24 -260700 sc-eQTL 7.21e-02 0.118 0.065 0.737 NK_cytokine L2
ENSG00000243725 TTC4 238803 sc-eQTL 2.55e-01 0.111 0.0969 0.737 NK_cytokine L2
ENSG00000006555 TTC22 153341 sc-eQTL 7.52e-01 0.0362 0.114 0.737 PB L2
ENSG00000116133 DHCR24 67469 sc-eQTL 1.37e-01 -0.15 0.1 0.737 PB L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 6.57e-01 -0.0549 0.123 0.737 PB L2
ENSG00000116209 TMEM59 901160 sc-eQTL 8.23e-01 -0.0116 0.0516 0.737 PB L2
ENSG00000116221 MRPL37 770623 sc-eQTL 9.34e-01 -0.00776 0.0937 0.737 PB L2
ENSG00000157216 SSBP3 541185 sc-eQTL 8.56e-01 -0.0197 0.108 0.737 PB L2
ENSG00000162402 USP24 -260700 sc-eQTL 4.94e-01 -0.0842 0.123 0.737 PB L2
ENSG00000215883 CYB5RL 754628 sc-eQTL 1.45e-01 -0.185 0.126 0.737 PB L2
ENSG00000243725 TTC4 238803 sc-eQTL 4.39e-01 -0.0921 0.119 0.737 PB L2
ENSG00000006555 TTC22 153341 sc-eQTL 8.33e-02 -0.16 0.092 0.741 Pro_T L2
ENSG00000116133 DHCR24 67469 sc-eQTL 4.78e-01 -0.0559 0.0786 0.741 Pro_T L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 3.79e-01 -0.0845 0.0959 0.741 Pro_T L2
ENSG00000116209 TMEM59 901160 sc-eQTL 4.08e-01 0.0552 0.0666 0.741 Pro_T L2
ENSG00000116221 MRPL37 770623 sc-eQTL 2.20e-02 -0.149 0.0645 0.741 Pro_T L2
ENSG00000157216 SSBP3 541185 sc-eQTL 2.45e-01 -0.0851 0.073 0.741 Pro_T L2
ENSG00000162402 USP24 -260700 sc-eQTL 4.62e-01 0.0658 0.0892 0.741 Pro_T L2
ENSG00000215883 CYB5RL 754628 sc-eQTL 8.03e-01 0.022 0.0882 0.741 Pro_T L2
ENSG00000243725 TTC4 238803 sc-eQTL 4.30e-03 0.278 0.0962 0.741 Pro_T L2
ENSG00000006555 TTC22 153341 sc-eQTL 7.56e-01 0.0288 0.0925 0.739 Treg L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 9.73e-01 0.00333 0.0991 0.739 Treg L2
ENSG00000116209 TMEM59 901160 sc-eQTL 7.76e-01 -0.0224 0.0783 0.739 Treg L2
ENSG00000116221 MRPL37 770623 sc-eQTL 7.26e-01 -0.034 0.0969 0.739 Treg L2
ENSG00000157216 SSBP3 541185 sc-eQTL 3.54e-01 -0.0802 0.0863 0.739 Treg L2
ENSG00000162402 USP24 -260700 sc-eQTL 7.49e-02 0.146 0.0818 0.739 Treg L2
ENSG00000243725 TTC4 238803 sc-eQTL 6.66e-01 0.0448 0.104 0.739 Treg L2
ENSG00000116133 DHCR24 67469 sc-eQTL 4.18e-02 0.172 0.0837 0.734 cDC L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 8.50e-01 0.0189 0.0999 0.734 cDC L2
ENSG00000116209 TMEM59 901160 sc-eQTL 1.31e-01 -0.128 0.0843 0.734 cDC L2
ENSG00000116221 MRPL37 770623 sc-eQTL 7.63e-01 -0.0328 0.109 0.734 cDC L2
ENSG00000157216 SSBP3 541185 sc-eQTL 9.49e-01 0.0064 0.1 0.734 cDC L2
ENSG00000162390 ACOT11 412407 sc-eQTL 3.26e-01 -0.0914 0.0928 0.734 cDC L2
ENSG00000162402 USP24 -260700 sc-eQTL 8.62e-01 0.0182 0.104 0.734 cDC L2
ENSG00000215883 CYB5RL 754628 sc-eQTL 9.60e-02 -0.149 0.089 0.734 cDC L2
ENSG00000243725 TTC4 238803 sc-eQTL 1.54e-01 0.152 0.106 0.734 cDC L2
ENSG00000116133 DHCR24 67469 sc-eQTL 5.52e-01 0.0359 0.0603 0.739 cMono_IL1B L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 9.77e-02 0.138 0.0832 0.739 cMono_IL1B L2
ENSG00000116209 TMEM59 901160 sc-eQTL 5.08e-01 0.0337 0.0508 0.739 cMono_IL1B L2
ENSG00000116221 MRPL37 770623 sc-eQTL 9.85e-01 -0.00166 0.0905 0.739 cMono_IL1B L2
ENSG00000157216 SSBP3 541185 sc-eQTL 3.83e-02 -0.191 0.0915 0.739 cMono_IL1B L2
ENSG00000162402 USP24 -260700 sc-eQTL 4.71e-01 -0.0492 0.0682 0.739 cMono_IL1B L2
ENSG00000243725 TTC4 238803 sc-eQTL 5.88e-01 0.0566 0.104 0.739 cMono_IL1B L2
ENSG00000116133 DHCR24 67469 sc-eQTL 7.81e-01 0.0158 0.0566 0.739 cMono_S100A L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 8.37e-01 -0.0178 0.0863 0.739 cMono_S100A L2
ENSG00000116209 TMEM59 901160 sc-eQTL 2.43e-01 -0.0807 0.0689 0.739 cMono_S100A L2
ENSG00000116221 MRPL37 770623 sc-eQTL 1.25e-02 0.248 0.0984 0.739 cMono_S100A L2
ENSG00000157216 SSBP3 541185 sc-eQTL 1.57e-01 -0.146 0.103 0.739 cMono_S100A L2
ENSG00000162402 USP24 -260700 sc-eQTL 7.24e-02 0.15 0.0832 0.739 cMono_S100A L2
ENSG00000243725 TTC4 238803 sc-eQTL 8.72e-01 0.017 0.105 0.739 cMono_S100A L2
ENSG00000006555 TTC22 153341 sc-eQTL 6.69e-01 -0.0406 0.0949 0.73 gdT L2
ENSG00000116133 DHCR24 67469 sc-eQTL 8.30e-01 -0.0228 0.106 0.73 gdT L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 4.18e-01 0.0861 0.106 0.73 gdT L2
ENSG00000116209 TMEM59 901160 sc-eQTL 4.22e-01 0.0867 0.108 0.73 gdT L2
ENSG00000116221 MRPL37 770623 sc-eQTL 2.15e-01 0.153 0.123 0.73 gdT L2
ENSG00000157216 SSBP3 541185 sc-eQTL 4.65e-01 -0.0554 0.0756 0.73 gdT L2
ENSG00000162402 USP24 -260700 sc-eQTL 4.65e-01 -0.0744 0.102 0.73 gdT L2
ENSG00000215883 CYB5RL 754628 sc-eQTL 2.90e-02 -0.229 0.104 0.73 gdT L2
ENSG00000243725 TTC4 238803 sc-eQTL 2.36e-01 -0.141 0.119 0.73 gdT L2
ENSG00000116133 DHCR24 67469 sc-eQTL 6.59e-01 0.0338 0.0764 0.74 intMono L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 2.34e-01 0.113 0.0949 0.74 intMono L2
ENSG00000116209 TMEM59 901160 sc-eQTL 9.58e-01 0.00368 0.07 0.74 intMono L2
ENSG00000116221 MRPL37 770623 sc-eQTL 6.71e-01 0.0456 0.107 0.74 intMono L2
ENSG00000157216 SSBP3 541185 sc-eQTL 5.03e-03 -0.304 0.107 0.74 intMono L2
ENSG00000162402 USP24 -260700 sc-eQTL 8.09e-01 0.0236 0.0974 0.74 intMono L2
ENSG00000243725 TTC4 238803 sc-eQTL 6.08e-01 0.0533 0.104 0.74 intMono L2
ENSG00000116133 DHCR24 67469 sc-eQTL 7.97e-01 0.0194 0.0752 0.733 ncMono L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 9.86e-02 -0.155 0.0934 0.733 ncMono L2
ENSG00000116209 TMEM59 901160 sc-eQTL 5.54e-01 -0.0446 0.0752 0.733 ncMono L2
ENSG00000116221 MRPL37 770623 sc-eQTL 7.92e-02 0.17 0.0963 0.733 ncMono L2
ENSG00000157216 SSBP3 541185 sc-eQTL 1.04e-01 -0.172 0.105 0.733 ncMono L2
ENSG00000162402 USP24 -260700 sc-eQTL 8.83e-01 -0.0125 0.0848 0.733 ncMono L2
ENSG00000243725 TTC4 238803 sc-eQTL 2.19e-01 0.123 0.1 0.733 ncMono L2
ENSG00000116133 DHCR24 67469 sc-eQTL 8.52e-01 -0.0168 0.0901 0.743 pDC L2
ENSG00000116205 TCEANC2 901080 sc-eQTL 5.02e-01 -0.0727 0.108 0.743 pDC L2
ENSG00000116209 TMEM59 901160 sc-eQTL 3.90e-01 0.0742 0.0861 0.743 pDC L2
ENSG00000116221 MRPL37 770623 sc-eQTL 7.20e-01 -0.0412 0.115 0.743 pDC L2
ENSG00000157216 SSBP3 541185 sc-eQTL 1.79e-01 0.137 0.101 0.743 pDC L2
ENSG00000162390 ACOT11 412407 sc-eQTL 8.10e-01 -0.0103 0.0428 0.743 pDC L2
ENSG00000162402 USP24 -260700 sc-eQTL 4.74e-01 0.0519 0.0722 0.743 pDC L2
ENSG00000215883 CYB5RL 754628 sc-eQTL 5.18e-01 0.064 0.0987 0.743 pDC L2
ENSG00000243725 TTC4 238803 sc-eQTL 6.81e-01 -0.0469 0.114 0.743 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 153341 sc-eQTL 1.27e-01 -0.147 0.0963 0.739 B_Memory LOneK1K
ENSG00000116133 DHCR24 67469 sc-eQTL 4.11e-01 0.0799 0.097 0.739 B_Memory LOneK1K
ENSG00000116205 TCEANC2 901080 sc-eQTL 3.29e-01 0.0917 0.0937 0.739 B_Memory LOneK1K
ENSG00000116209 TMEM59 901160 sc-eQTL 2.28e-01 -0.0881 0.0728 0.739 B_Memory LOneK1K
ENSG00000116221 MRPL37 770623 sc-eQTL 2.36e-02 -0.197 0.0864 0.739 B_Memory LOneK1K
ENSG00000157216 SSBP3 541185 sc-eQTL 5.37e-01 0.047 0.076 0.739 B_Memory LOneK1K
ENSG00000162402 USP24 -260700 sc-eQTL 1.23e-01 0.107 0.069 0.739 B_Memory LOneK1K
ENSG00000215883 CYB5RL 754628 sc-eQTL 8.20e-01 -0.0243 0.107 0.739 B_Memory LOneK1K
ENSG00000243725 TTC4 238803 sc-eQTL 1.72e-01 -0.131 0.0953 0.739 B_Memory LOneK1K
ENSG00000006555 TTC22 153341 sc-eQTL 7.89e-01 0.0277 0.103 0.739 B_Naive LOneK1K
ENSG00000116133 DHCR24 67469 sc-eQTL 1.19e-01 0.145 0.0924 0.739 B_Naive LOneK1K
ENSG00000116205 TCEANC2 901080 sc-eQTL 2.31e-01 0.101 0.0837 0.739 B_Naive LOneK1K
ENSG00000116209 TMEM59 901160 sc-eQTL 8.22e-01 0.0134 0.0597 0.739 B_Naive LOneK1K
ENSG00000116221 MRPL37 770623 sc-eQTL 4.24e-01 0.0687 0.0857 0.739 B_Naive LOneK1K
ENSG00000157216 SSBP3 541185 sc-eQTL 1.58e-01 -0.108 0.0764 0.739 B_Naive LOneK1K
ENSG00000162402 USP24 -260700 sc-eQTL 9.42e-01 0.00482 0.0658 0.739 B_Naive LOneK1K
ENSG00000215883 CYB5RL 754628 sc-eQTL 6.52e-04 -0.351 0.101 0.739 B_Naive LOneK1K
ENSG00000243725 TTC4 238803 sc-eQTL 6.12e-01 0.0497 0.098 0.739 B_Naive LOneK1K
ENSG00000116133 DHCR24 67469 sc-eQTL 7.20e-01 0.0213 0.0592 0.739 CD14_Mono LOneK1K
ENSG00000116205 TCEANC2 901080 sc-eQTL 3.83e-01 0.0646 0.0739 0.739 CD14_Mono LOneK1K
ENSG00000116209 TMEM59 901160 sc-eQTL 6.94e-01 -0.0201 0.0511 0.739 CD14_Mono LOneK1K
ENSG00000116221 MRPL37 770623 sc-eQTL 1.75e-01 0.123 0.09 0.739 CD14_Mono LOneK1K
ENSG00000157216 SSBP3 541185 sc-eQTL 9.65e-03 -0.243 0.0932 0.739 CD14_Mono LOneK1K
ENSG00000162402 USP24 -260700 sc-eQTL 8.77e-01 0.01 0.0647 0.739 CD14_Mono LOneK1K
ENSG00000243725 TTC4 238803 sc-eQTL 5.99e-01 0.0565 0.107 0.739 CD14_Mono LOneK1K
ENSG00000116133 DHCR24 67469 sc-eQTL 9.76e-01 -0.00214 0.0715 0.737 CD16_Mono LOneK1K
ENSG00000116205 TCEANC2 901080 sc-eQTL 5.33e-01 -0.0586 0.0939 0.737 CD16_Mono LOneK1K
ENSG00000116209 TMEM59 901160 sc-eQTL 5.81e-01 -0.0386 0.0698 0.737 CD16_Mono LOneK1K
ENSG00000116221 MRPL37 770623 sc-eQTL 1.09e-01 0.153 0.0951 0.737 CD16_Mono LOneK1K
ENSG00000157216 SSBP3 541185 sc-eQTL 5.95e-03 -0.279 0.1 0.737 CD16_Mono LOneK1K
ENSG00000162402 USP24 -260700 sc-eQTL 9.21e-01 0.008 0.0805 0.737 CD16_Mono LOneK1K
ENSG00000243725 TTC4 238803 sc-eQTL 2.29e-01 0.121 0.101 0.737 CD16_Mono LOneK1K
ENSG00000006555 TTC22 153341 sc-eQTL 8.36e-01 0.0175 0.0844 0.737 NK_CD56dim LOneK1K
ENSG00000116133 DHCR24 67469 sc-eQTL 4.61e-03 0.248 0.0865 0.737 NK_CD56dim LOneK1K
ENSG00000116205 TCEANC2 901080 sc-eQTL 5.98e-01 0.0457 0.0865 0.737 NK_CD56dim LOneK1K
ENSG00000116209 TMEM59 901160 sc-eQTL 2.24e-01 0.0813 0.0667 0.737 NK_CD56dim LOneK1K
ENSG00000116221 MRPL37 770623 sc-eQTL 1.54e-01 0.128 0.0892 0.737 NK_CD56dim LOneK1K
ENSG00000157216 SSBP3 541185 sc-eQTL 1.53e-02 -0.177 0.0725 0.737 NK_CD56dim LOneK1K
ENSG00000162398 LEXM 148601 sc-eQTL 9.38e-01 0.00647 0.0829 0.737 NK_CD56dim LOneK1K
ENSG00000162402 USP24 -260700 sc-eQTL 4.42e-01 0.0404 0.0525 0.737 NK_CD56dim LOneK1K
ENSG00000243725 TTC4 238803 sc-eQTL 6.32e-01 0.0449 0.0935 0.737 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000234810 \N -374624 1.25e-06 1.01e-06 1.48e-07 3.63e-07 1.07e-07 2.01e-07 6.33e-07 2e-07 6.18e-07 2.43e-07 1.07e-06 5.39e-07 1.53e-06 2.19e-07 4.17e-07 2.89e-07 7.22e-07 4.16e-07 2.13e-07 1.89e-07 2.01e-07 5.83e-07 5.21e-07 2.24e-07 1.3e-06 2.68e-07 4.27e-07 4.06e-07 4.88e-07 7.06e-07 4.53e-07 5.71e-08 4.77e-08 1.5e-07 3.26e-07 1.94e-07 2.94e-07 8.21e-08 6.63e-08 6.46e-08 3.24e-08 1.13e-06 5.41e-08 1.55e-08 1.16e-07 3.5e-08 8.01e-08 2.28e-08 5.05e-08