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Genes within 1Mb (chr1:54950799:A:AT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 149476 sc-eQTL 7.12e-01 -0.0352 0.0954 0.72 B L1
ENSG00000116133 DHCR24 63604 sc-eQTL 4.45e-01 0.0689 0.0901 0.72 B L1
ENSG00000116205 TCEANC2 897215 sc-eQTL 2.60e-01 0.0877 0.0776 0.72 B L1
ENSG00000116209 TMEM59 897295 sc-eQTL 6.26e-01 -0.0231 0.0474 0.72 B L1
ENSG00000116221 MRPL37 766758 sc-eQTL 6.14e-01 -0.0313 0.062 0.72 B L1
ENSG00000157216 SSBP3 537320 sc-eQTL 6.17e-01 0.0325 0.0649 0.72 B L1
ENSG00000162402 USP24 -264565 sc-eQTL 2.17e-01 0.0679 0.0549 0.72 B L1
ENSG00000215883 CYB5RL 750763 sc-eQTL 2.25e-01 -0.129 0.106 0.72 B L1
ENSG00000243725 TTC4 234938 sc-eQTL 8.75e-01 -0.0145 0.0922 0.72 B L1
ENSG00000006555 TTC22 149476 sc-eQTL 1.46e-02 0.18 0.0733 0.72 CD4T L1
ENSG00000116205 TCEANC2 897215 sc-eQTL 3.34e-01 -0.0587 0.0607 0.72 CD4T L1
ENSG00000116209 TMEM59 897295 sc-eQTL 7.91e-02 0.0992 0.0562 0.72 CD4T L1
ENSG00000116221 MRPL37 766758 sc-eQTL 7.26e-02 -0.14 0.0777 0.72 CD4T L1
ENSG00000157216 SSBP3 537320 sc-eQTL 5.69e-02 0.123 0.0644 0.72 CD4T L1
ENSG00000162402 USP24 -264565 sc-eQTL 3.17e-01 0.053 0.0528 0.72 CD4T L1
ENSG00000243725 TTC4 234938 sc-eQTL 4.99e-02 0.156 0.079 0.72 CD4T L1
ENSG00000006555 TTC22 149476 sc-eQTL 1.57e-01 0.0923 0.0649 0.72 CD8T L1
ENSG00000116205 TCEANC2 897215 sc-eQTL 6.24e-01 0.0399 0.0812 0.72 CD8T L1
ENSG00000116209 TMEM59 897295 sc-eQTL 6.13e-01 0.0286 0.0564 0.72 CD8T L1
ENSG00000116221 MRPL37 766758 sc-eQTL 4.36e-01 0.0606 0.0776 0.72 CD8T L1
ENSG00000157216 SSBP3 537320 sc-eQTL 8.28e-01 0.0121 0.0558 0.72 CD8T L1
ENSG00000162402 USP24 -264565 sc-eQTL 5.41e-01 0.033 0.0539 0.72 CD8T L1
ENSG00000243725 TTC4 234938 sc-eQTL 6.51e-01 0.0424 0.0936 0.72 CD8T L1
ENSG00000116133 DHCR24 63604 sc-eQTL 1.58e-01 0.122 0.0863 0.723 DC L1
ENSG00000116205 TCEANC2 897215 sc-eQTL 6.28e-01 0.0472 0.0971 0.723 DC L1
ENSG00000116209 TMEM59 897295 sc-eQTL 8.74e-01 -0.0121 0.0764 0.723 DC L1
ENSG00000116221 MRPL37 766758 sc-eQTL 9.01e-01 0.0128 0.103 0.723 DC L1
ENSG00000157216 SSBP3 537320 sc-eQTL 2.29e-01 0.11 0.0912 0.723 DC L1
ENSG00000162390 ACOT11 408542 sc-eQTL 6.94e-01 0.0347 0.088 0.723 DC L1
ENSG00000162402 USP24 -264565 sc-eQTL 4.13e-01 0.0435 0.053 0.723 DC L1
ENSG00000215883 CYB5RL 750763 sc-eQTL 2.74e-01 -0.105 0.0957 0.723 DC L1
ENSG00000243725 TTC4 234938 sc-eQTL 6.49e-01 0.047 0.103 0.723 DC L1
ENSG00000116133 DHCR24 63604 sc-eQTL 5.19e-01 0.0403 0.0623 0.72 Mono L1
ENSG00000116205 TCEANC2 897215 sc-eQTL 6.06e-01 0.0347 0.0673 0.72 Mono L1
ENSG00000116209 TMEM59 897295 sc-eQTL 6.63e-01 -0.0218 0.05 0.72 Mono L1
ENSG00000116221 MRPL37 766758 sc-eQTL 2.67e-01 0.0929 0.0834 0.72 Mono L1
ENSG00000157216 SSBP3 537320 sc-eQTL 1.56e-03 -0.3 0.0936 0.72 Mono L1
ENSG00000162402 USP24 -264565 sc-eQTL 7.84e-01 -0.0157 0.0571 0.72 Mono L1
ENSG00000243725 TTC4 234938 sc-eQTL 4.77e-01 0.0715 0.1 0.72 Mono L1
ENSG00000006555 TTC22 149476 sc-eQTL 8.78e-01 0.0132 0.0861 0.719 NK L1
ENSG00000116133 DHCR24 63604 sc-eQTL 8.56e-03 0.227 0.0855 0.719 NK L1
ENSG00000116205 TCEANC2 897215 sc-eQTL 2.61e-01 0.0964 0.0855 0.719 NK L1
ENSG00000116209 TMEM59 897295 sc-eQTL 8.83e-02 0.114 0.0667 0.719 NK L1
ENSG00000116221 MRPL37 766758 sc-eQTL 8.58e-01 0.015 0.0835 0.719 NK L1
ENSG00000157216 SSBP3 537320 sc-eQTL 3.67e-02 -0.151 0.0717 0.719 NK L1
ENSG00000162398 LEXM 144736 sc-eQTL 7.75e-01 -0.0232 0.0813 0.719 NK L1
ENSG00000162402 USP24 -264565 sc-eQTL 6.61e-01 0.0217 0.0493 0.719 NK L1
ENSG00000243725 TTC4 234938 sc-eQTL 5.11e-01 0.0613 0.0931 0.719 NK L1
ENSG00000006555 TTC22 149476 sc-eQTL 4.91e-01 0.0522 0.0757 0.72 Other_T L1
ENSG00000116133 DHCR24 63604 sc-eQTL 9.55e-01 -0.00335 0.0588 0.72 Other_T L1
ENSG00000116205 TCEANC2 897215 sc-eQTL 5.16e-01 0.0572 0.0879 0.72 Other_T L1
ENSG00000116209 TMEM59 897295 sc-eQTL 4.84e-01 0.0423 0.0603 0.72 Other_T L1
ENSG00000116221 MRPL37 766758 sc-eQTL 3.30e-02 -0.12 0.0559 0.72 Other_T L1
ENSG00000157216 SSBP3 537320 sc-eQTL 4.65e-01 -0.0478 0.0653 0.72 Other_T L1
ENSG00000162402 USP24 -264565 sc-eQTL 6.13e-01 -0.0352 0.0696 0.72 Other_T L1
ENSG00000215883 CYB5RL 750763 sc-eQTL 4.72e-01 0.0684 0.0951 0.72 Other_T L1
ENSG00000243725 TTC4 234938 sc-eQTL 4.32e-01 0.0746 0.0947 0.72 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 149476 sc-eQTL 2.82e-01 -0.0883 0.0817 0.714 B_Activated L2
ENSG00000116133 DHCR24 63604 sc-eQTL 3.36e-01 0.0927 0.0961 0.714 B_Activated L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 5.91e-01 -0.0557 0.103 0.714 B_Activated L2
ENSG00000116209 TMEM59 897295 sc-eQTL 4.68e-01 -0.0797 0.11 0.714 B_Activated L2
ENSG00000116221 MRPL37 766758 sc-eQTL 3.07e-01 -0.121 0.118 0.714 B_Activated L2
ENSG00000157216 SSBP3 537320 sc-eQTL 2.74e-01 -0.118 0.107 0.714 B_Activated L2
ENSG00000162402 USP24 -264565 sc-eQTL 3.84e-02 0.216 0.104 0.714 B_Activated L2
ENSG00000215883 CYB5RL 750763 sc-eQTL 6.23e-01 -0.0456 0.0925 0.714 B_Activated L2
ENSG00000243725 TTC4 234938 sc-eQTL 3.93e-01 -0.0858 0.1 0.714 B_Activated L2
ENSG00000006555 TTC22 149476 sc-eQTL 6.18e-01 -0.0507 0.102 0.721 B_Intermediate L2
ENSG00000116133 DHCR24 63604 sc-eQTL 4.64e-01 0.0691 0.0942 0.721 B_Intermediate L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 7.48e-01 -0.0302 0.094 0.721 B_Intermediate L2
ENSG00000116209 TMEM59 897295 sc-eQTL 4.53e-01 -0.0603 0.0803 0.721 B_Intermediate L2
ENSG00000116221 MRPL37 766758 sc-eQTL 1.11e-01 -0.151 0.0941 0.721 B_Intermediate L2
ENSG00000157216 SSBP3 537320 sc-eQTL 2.85e-01 0.0945 0.0882 0.721 B_Intermediate L2
ENSG00000162402 USP24 -264565 sc-eQTL 2.55e-01 0.0847 0.0742 0.721 B_Intermediate L2
ENSG00000215883 CYB5RL 750763 sc-eQTL 3.69e-01 0.0947 0.105 0.721 B_Intermediate L2
ENSG00000243725 TTC4 234938 sc-eQTL 9.44e-01 0.00673 0.0958 0.721 B_Intermediate L2
ENSG00000006555 TTC22 149476 sc-eQTL 5.07e-01 -0.0645 0.0969 0.72 B_Memory L2
ENSG00000116133 DHCR24 63604 sc-eQTL 6.62e-01 -0.0422 0.0963 0.72 B_Memory L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 1.27e-01 0.157 0.102 0.72 B_Memory L2
ENSG00000116209 TMEM59 897295 sc-eQTL 1.84e-01 -0.114 0.0855 0.72 B_Memory L2
ENSG00000116221 MRPL37 766758 sc-eQTL 1.39e-01 -0.129 0.0865 0.72 B_Memory L2
ENSG00000157216 SSBP3 537320 sc-eQTL 5.62e-01 0.0471 0.0811 0.72 B_Memory L2
ENSG00000162402 USP24 -264565 sc-eQTL 4.11e-01 0.0653 0.0793 0.72 B_Memory L2
ENSG00000215883 CYB5RL 750763 sc-eQTL 6.56e-01 0.0438 0.0981 0.72 B_Memory L2
ENSG00000243725 TTC4 234938 sc-eQTL 4.02e-01 -0.0852 0.102 0.72 B_Memory L2
ENSG00000006555 TTC22 149476 sc-eQTL 9.33e-01 -0.00872 0.103 0.72 B_Naive1 L2
ENSG00000116133 DHCR24 63604 sc-eQTL 8.17e-01 0.0224 0.0966 0.72 B_Naive1 L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 5.29e-01 0.0542 0.0861 0.72 B_Naive1 L2
ENSG00000116209 TMEM59 897295 sc-eQTL 7.16e-01 0.0228 0.0626 0.72 B_Naive1 L2
ENSG00000116221 MRPL37 766758 sc-eQTL 3.39e-01 0.0883 0.0921 0.72 B_Naive1 L2
ENSG00000157216 SSBP3 537320 sc-eQTL 6.98e-01 -0.0341 0.0879 0.72 B_Naive1 L2
ENSG00000162402 USP24 -264565 sc-eQTL 9.10e-01 -0.00782 0.0692 0.72 B_Naive1 L2
ENSG00000215883 CYB5RL 750763 sc-eQTL 2.40e-01 -0.123 0.104 0.72 B_Naive1 L2
ENSG00000243725 TTC4 234938 sc-eQTL 3.13e-01 0.0952 0.0941 0.72 B_Naive1 L2
ENSG00000006555 TTC22 149476 sc-eQTL 3.72e-01 0.0906 0.101 0.721 B_Naive2 L2
ENSG00000116133 DHCR24 63604 sc-eQTL 3.50e-01 0.0825 0.0881 0.721 B_Naive2 L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 9.46e-01 -0.00668 0.0979 0.721 B_Naive2 L2
ENSG00000116209 TMEM59 897295 sc-eQTL 4.31e-01 0.0635 0.0805 0.721 B_Naive2 L2
ENSG00000116221 MRPL37 766758 sc-eQTL 4.53e-01 0.0713 0.0948 0.721 B_Naive2 L2
ENSG00000157216 SSBP3 537320 sc-eQTL 1.91e-01 -0.122 0.0931 0.721 B_Naive2 L2
ENSG00000162402 USP24 -264565 sc-eQTL 7.44e-01 0.0242 0.0741 0.721 B_Naive2 L2
ENSG00000215883 CYB5RL 750763 sc-eQTL 1.30e-01 -0.158 0.104 0.721 B_Naive2 L2
ENSG00000243725 TTC4 234938 sc-eQTL 5.62e-01 -0.063 0.108 0.721 B_Naive2 L2
ENSG00000006555 TTC22 149476 sc-eQTL 9.35e-01 0.00787 0.0964 0.723 CD4_CTL L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 2.13e-01 0.124 0.0988 0.723 CD4_CTL L2
ENSG00000116209 TMEM59 897295 sc-eQTL 4.10e-01 -0.0743 0.09 0.723 CD4_CTL L2
ENSG00000116221 MRPL37 766758 sc-eQTL 3.84e-01 -0.0966 0.111 0.723 CD4_CTL L2
ENSG00000157216 SSBP3 537320 sc-eQTL 6.65e-01 -0.0296 0.0682 0.723 CD4_CTL L2
ENSG00000162402 USP24 -264565 sc-eQTL 8.05e-01 -0.0231 0.0937 0.723 CD4_CTL L2
ENSG00000243725 TTC4 234938 sc-eQTL 8.18e-01 0.0242 0.105 0.723 CD4_CTL L2
ENSG00000006555 TTC22 149476 sc-eQTL 5.03e-02 0.17 0.0865 0.72 CD4_Naive L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 5.61e-01 -0.0386 0.0663 0.72 CD4_Naive L2
ENSG00000116209 TMEM59 897295 sc-eQTL 1.08e-01 0.104 0.0642 0.72 CD4_Naive L2
ENSG00000116221 MRPL37 766758 sc-eQTL 1.70e-01 -0.114 0.0828 0.72 CD4_Naive L2
ENSG00000157216 SSBP3 537320 sc-eQTL 4.03e-01 0.0556 0.0663 0.72 CD4_Naive L2
ENSG00000162402 USP24 -264565 sc-eQTL 7.90e-01 -0.0153 0.0573 0.72 CD4_Naive L2
ENSG00000243725 TTC4 234938 sc-eQTL 3.18e-01 0.0872 0.0871 0.72 CD4_Naive L2
ENSG00000006555 TTC22 149476 sc-eQTL 3.04e-02 0.199 0.0913 0.72 CD4_TCM L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 3.58e-01 -0.0826 0.0896 0.72 CD4_TCM L2
ENSG00000116209 TMEM59 897295 sc-eQTL 1.48e-01 0.0978 0.0674 0.72 CD4_TCM L2
ENSG00000116221 MRPL37 766758 sc-eQTL 4.39e-01 -0.066 0.0851 0.72 CD4_TCM L2
ENSG00000157216 SSBP3 537320 sc-eQTL 3.13e-02 0.179 0.0826 0.72 CD4_TCM L2
ENSG00000162402 USP24 -264565 sc-eQTL 4.26e-01 0.0551 0.0691 0.72 CD4_TCM L2
ENSG00000243725 TTC4 234938 sc-eQTL 3.94e-02 0.205 0.0987 0.72 CD4_TCM L2
ENSG00000006555 TTC22 149476 sc-eQTL 3.72e-01 -0.0952 0.106 0.72 CD4_TEM L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 4.18e-01 -0.0819 0.101 0.72 CD4_TEM L2
ENSG00000116209 TMEM59 897295 sc-eQTL 5.04e-01 0.0523 0.0782 0.72 CD4_TEM L2
ENSG00000116221 MRPL37 766758 sc-eQTL 6.20e-01 -0.05 0.101 0.72 CD4_TEM L2
ENSG00000157216 SSBP3 537320 sc-eQTL 2.07e-02 0.199 0.0852 0.72 CD4_TEM L2
ENSG00000162402 USP24 -264565 sc-eQTL 5.06e-01 0.0523 0.0785 0.72 CD4_TEM L2
ENSG00000243725 TTC4 234938 sc-eQTL 2.71e-02 0.228 0.103 0.72 CD4_TEM L2
ENSG00000006555 TTC22 149476 sc-eQTL 9.85e-01 0.00155 0.0841 0.72 CD8_CTL L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 1.62e-02 0.223 0.0918 0.72 CD8_CTL L2
ENSG00000116209 TMEM59 897295 sc-eQTL 6.89e-01 -0.0325 0.0809 0.72 CD8_CTL L2
ENSG00000116221 MRPL37 766758 sc-eQTL 5.68e-01 0.0548 0.0958 0.72 CD8_CTL L2
ENSG00000157216 SSBP3 537320 sc-eQTL 1.71e-01 -0.0896 0.0653 0.72 CD8_CTL L2
ENSG00000162402 USP24 -264565 sc-eQTL 9.00e-01 0.00824 0.0652 0.72 CD8_CTL L2
ENSG00000243725 TTC4 234938 sc-eQTL 1.24e-02 -0.243 0.0961 0.72 CD8_CTL L2
ENSG00000006555 TTC22 149476 sc-eQTL 7.17e-01 0.0346 0.0955 0.72 CD8_Naive L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 1.02e-01 -0.141 0.0859 0.72 CD8_Naive L2
ENSG00000116209 TMEM59 897295 sc-eQTL 6.69e-01 -0.0362 0.0845 0.72 CD8_Naive L2
ENSG00000116221 MRPL37 766758 sc-eQTL 8.47e-02 0.174 0.101 0.72 CD8_Naive L2
ENSG00000157216 SSBP3 537320 sc-eQTL 6.24e-01 0.0376 0.0767 0.72 CD8_Naive L2
ENSG00000162402 USP24 -264565 sc-eQTL 6.79e-02 0.127 0.0692 0.72 CD8_Naive L2
ENSG00000243725 TTC4 234938 sc-eQTL 4.88e-01 0.0708 0.102 0.72 CD8_Naive L2
ENSG00000006555 TTC22 149476 sc-eQTL 5.95e-01 0.0557 0.105 0.731 CD8_TCM L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 2.24e-01 0.128 0.105 0.731 CD8_TCM L2
ENSG00000116209 TMEM59 897295 sc-eQTL 5.83e-01 -0.051 0.0927 0.731 CD8_TCM L2
ENSG00000116221 MRPL37 766758 sc-eQTL 1.33e-01 -0.158 0.105 0.731 CD8_TCM L2
ENSG00000157216 SSBP3 537320 sc-eQTL 8.87e-01 0.013 0.0913 0.731 CD8_TCM L2
ENSG00000162402 USP24 -264565 sc-eQTL 5.17e-01 -0.0574 0.0884 0.731 CD8_TCM L2
ENSG00000243725 TTC4 234938 sc-eQTL 6.06e-03 0.293 0.106 0.731 CD8_TCM L2
ENSG00000006555 TTC22 149476 sc-eQTL 9.70e-01 0.00366 0.0978 0.717 CD8_TEM L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 6.40e-02 -0.188 0.101 0.717 CD8_TEM L2
ENSG00000116209 TMEM59 897295 sc-eQTL 8.22e-01 -0.0222 0.0987 0.717 CD8_TEM L2
ENSG00000116221 MRPL37 766758 sc-eQTL 6.84e-01 0.0407 0.1 0.717 CD8_TEM L2
ENSG00000157216 SSBP3 537320 sc-eQTL 1.80e-01 0.127 0.0942 0.717 CD8_TEM L2
ENSG00000162402 USP24 -264565 sc-eQTL 4.34e-01 -0.0781 0.0996 0.717 CD8_TEM L2
ENSG00000243725 TTC4 234938 sc-eQTL 1.59e-01 0.143 0.101 0.717 CD8_TEM L2
ENSG00000006555 TTC22 149476 sc-eQTL 5.49e-02 0.18 0.0931 0.721 MAIT L2
ENSG00000116133 DHCR24 63604 sc-eQTL 5.51e-01 -0.0414 0.0694 0.721 MAIT L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 4.20e-01 0.079 0.0977 0.721 MAIT L2
ENSG00000116209 TMEM59 897295 sc-eQTL 5.40e-01 -0.0542 0.0883 0.721 MAIT L2
ENSG00000116221 MRPL37 766758 sc-eQTL 2.23e-01 -0.131 0.107 0.721 MAIT L2
ENSG00000157216 SSBP3 537320 sc-eQTL 5.92e-01 -0.051 0.0951 0.721 MAIT L2
ENSG00000162402 USP24 -264565 sc-eQTL 2.35e-01 -0.1 0.0842 0.721 MAIT L2
ENSG00000215883 CYB5RL 750763 sc-eQTL 3.53e-01 0.0912 0.0981 0.721 MAIT L2
ENSG00000243725 TTC4 234938 sc-eQTL 1.77e-01 -0.132 0.0972 0.721 MAIT L2
ENSG00000006555 TTC22 149476 sc-eQTL 9.76e-02 -0.171 0.103 0.72 NK_CD56bright L2
ENSG00000116133 DHCR24 63604 sc-eQTL 8.42e-01 0.0183 0.0916 0.72 NK_CD56bright L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 4.16e-01 0.0787 0.0966 0.72 NK_CD56bright L2
ENSG00000116209 TMEM59 897295 sc-eQTL 4.36e-01 0.0735 0.0942 0.72 NK_CD56bright L2
ENSG00000116221 MRPL37 766758 sc-eQTL 6.70e-01 -0.045 0.105 0.72 NK_CD56bright L2
ENSG00000157216 SSBP3 537320 sc-eQTL 9.78e-03 -0.204 0.0782 0.72 NK_CD56bright L2
ENSG00000162398 LEXM 144736 sc-eQTL 8.40e-01 0.0189 0.0938 0.72 NK_CD56bright L2
ENSG00000162402 USP24 -264565 sc-eQTL 7.46e-01 -0.0262 0.0808 0.72 NK_CD56bright L2
ENSG00000243725 TTC4 234938 sc-eQTL 6.50e-01 -0.0463 0.102 0.72 NK_CD56bright L2
ENSG00000006555 TTC22 149476 sc-eQTL 4.03e-01 0.0729 0.087 0.718 NK_CD56dim L2
ENSG00000116133 DHCR24 63604 sc-eQTL 3.30e-03 0.265 0.0891 0.718 NK_CD56dim L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 3.01e-01 0.102 0.0982 0.718 NK_CD56dim L2
ENSG00000116209 TMEM59 897295 sc-eQTL 3.47e-02 0.154 0.0722 0.718 NK_CD56dim L2
ENSG00000116221 MRPL37 766758 sc-eQTL 8.76e-01 -0.0148 0.095 0.718 NK_CD56dim L2
ENSG00000157216 SSBP3 537320 sc-eQTL 1.37e-02 -0.191 0.0766 0.718 NK_CD56dim L2
ENSG00000162398 LEXM 144736 sc-eQTL 4.99e-01 -0.0605 0.0893 0.718 NK_CD56dim L2
ENSG00000162402 USP24 -264565 sc-eQTL 3.93e-01 -0.0485 0.0567 0.718 NK_CD56dim L2
ENSG00000243725 TTC4 234938 sc-eQTL 6.86e-01 0.0394 0.0972 0.718 NK_CD56dim L2
ENSG00000006555 TTC22 149476 sc-eQTL 9.85e-01 -0.00191 0.103 0.717 NK_HLA L2
ENSG00000116133 DHCR24 63604 sc-eQTL 9.31e-01 -0.00869 0.101 0.717 NK_HLA L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 9.33e-01 -0.0082 0.0973 0.717 NK_HLA L2
ENSG00000116209 TMEM59 897295 sc-eQTL 7.12e-02 0.174 0.0958 0.717 NK_HLA L2
ENSG00000116221 MRPL37 766758 sc-eQTL 2.48e-01 0.123 0.106 0.717 NK_HLA L2
ENSG00000157216 SSBP3 537320 sc-eQTL 7.52e-01 -0.0275 0.0869 0.717 NK_HLA L2
ENSG00000162398 LEXM 144736 sc-eQTL 6.01e-02 0.184 0.0971 0.717 NK_HLA L2
ENSG00000162402 USP24 -264565 sc-eQTL 5.82e-01 0.0396 0.0719 0.717 NK_HLA L2
ENSG00000243725 TTC4 234938 sc-eQTL 4.05e-01 -0.0895 0.107 0.717 NK_HLA L2
ENSG00000006555 TTC22 149476 sc-eQTL 9.09e-01 -0.0105 0.0917 0.718 NK_cytokine L2
ENSG00000116133 DHCR24 63604 sc-eQTL 8.33e-02 0.16 0.0921 0.718 NK_cytokine L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 5.13e-01 0.0602 0.092 0.718 NK_cytokine L2
ENSG00000116209 TMEM59 897295 sc-eQTL 6.64e-01 0.0325 0.0749 0.718 NK_cytokine L2
ENSG00000116221 MRPL37 766758 sc-eQTL 7.03e-01 0.0353 0.0922 0.718 NK_cytokine L2
ENSG00000157216 SSBP3 537320 sc-eQTL 2.50e-01 -0.089 0.0772 0.718 NK_cytokine L2
ENSG00000162398 LEXM 144736 sc-eQTL 2.50e-01 0.111 0.0964 0.718 NK_cytokine L2
ENSG00000162402 USP24 -264565 sc-eQTL 2.43e-01 0.077 0.0657 0.718 NK_cytokine L2
ENSG00000243725 TTC4 234938 sc-eQTL 1.33e-01 0.147 0.0973 0.718 NK_cytokine L2
ENSG00000006555 TTC22 149476 sc-eQTL 8.38e-01 -0.023 0.112 0.707 PB L2
ENSG00000116133 DHCR24 63604 sc-eQTL 1.81e-01 -0.133 0.0987 0.707 PB L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 8.95e-01 -0.0161 0.121 0.707 PB L2
ENSG00000116209 TMEM59 897295 sc-eQTL 7.68e-01 -0.015 0.0506 0.707 PB L2
ENSG00000116221 MRPL37 766758 sc-eQTL 9.25e-01 -0.00871 0.092 0.707 PB L2
ENSG00000157216 SSBP3 537320 sc-eQTL 9.62e-01 -0.00509 0.106 0.707 PB L2
ENSG00000162402 USP24 -264565 sc-eQTL 6.48e-02 -0.222 0.119 0.707 PB L2
ENSG00000215883 CYB5RL 750763 sc-eQTL 4.73e-02 -0.246 0.123 0.707 PB L2
ENSG00000243725 TTC4 234938 sc-eQTL 2.62e-01 -0.131 0.116 0.707 PB L2
ENSG00000006555 TTC22 149476 sc-eQTL 1.13e-01 -0.147 0.0925 0.724 Pro_T L2
ENSG00000116133 DHCR24 63604 sc-eQTL 5.38e-01 -0.0487 0.079 0.724 Pro_T L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 1.89e-01 -0.127 0.0961 0.724 Pro_T L2
ENSG00000116209 TMEM59 897295 sc-eQTL 1.87e-01 0.0884 0.0667 0.724 Pro_T L2
ENSG00000116221 MRPL37 766758 sc-eQTL 3.37e-02 -0.139 0.0649 0.724 Pro_T L2
ENSG00000157216 SSBP3 537320 sc-eQTL 1.36e-01 -0.11 0.0732 0.724 Pro_T L2
ENSG00000162402 USP24 -264565 sc-eQTL 2.70e-01 0.099 0.0895 0.724 Pro_T L2
ENSG00000215883 CYB5RL 750763 sc-eQTL 6.68e-01 -0.038 0.0885 0.724 Pro_T L2
ENSG00000243725 TTC4 234938 sc-eQTL 4.34e-03 0.279 0.0966 0.724 Pro_T L2
ENSG00000006555 TTC22 149476 sc-eQTL 7.63e-01 0.0278 0.0921 0.72 Treg L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 5.59e-01 0.0578 0.0986 0.72 Treg L2
ENSG00000116209 TMEM59 897295 sc-eQTL 8.35e-01 0.0162 0.078 0.72 Treg L2
ENSG00000116221 MRPL37 766758 sc-eQTL 1.95e-01 -0.125 0.0961 0.72 Treg L2
ENSG00000157216 SSBP3 537320 sc-eQTL 3.73e-01 -0.0768 0.0859 0.72 Treg L2
ENSG00000162402 USP24 -264565 sc-eQTL 7.89e-02 0.144 0.0814 0.72 Treg L2
ENSG00000243725 TTC4 234938 sc-eQTL 7.08e-01 0.0387 0.103 0.72 Treg L2
ENSG00000116133 DHCR24 63604 sc-eQTL 4.34e-02 0.172 0.0844 0.72 cDC L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 9.37e-01 0.00797 0.101 0.72 cDC L2
ENSG00000116209 TMEM59 897295 sc-eQTL 1.18e-01 -0.133 0.0849 0.72 cDC L2
ENSG00000116221 MRPL37 766758 sc-eQTL 9.48e-01 -0.00718 0.109 0.72 cDC L2
ENSG00000157216 SSBP3 537320 sc-eQTL 5.19e-01 0.0651 0.101 0.72 cDC L2
ENSG00000162390 ACOT11 408542 sc-eQTL 8.51e-01 -0.0176 0.0938 0.72 cDC L2
ENSG00000162402 USP24 -264565 sc-eQTL 9.76e-01 0.00321 0.105 0.72 cDC L2
ENSG00000215883 CYB5RL 750763 sc-eQTL 1.59e-01 -0.127 0.0898 0.72 cDC L2
ENSG00000243725 TTC4 234938 sc-eQTL 3.56e-01 0.0996 0.108 0.72 cDC L2
ENSG00000116133 DHCR24 63604 sc-eQTL 9.39e-01 0.00462 0.0601 0.72 cMono_IL1B L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 1.12e-01 0.132 0.083 0.72 cMono_IL1B L2
ENSG00000116209 TMEM59 897295 sc-eQTL 6.91e-01 0.0202 0.0506 0.72 cMono_IL1B L2
ENSG00000116221 MRPL37 766758 sc-eQTL 6.33e-01 -0.0431 0.0901 0.72 cMono_IL1B L2
ENSG00000157216 SSBP3 537320 sc-eQTL 3.13e-02 -0.197 0.0911 0.72 cMono_IL1B L2
ENSG00000162402 USP24 -264565 sc-eQTL 4.16e-01 -0.0553 0.0679 0.72 cMono_IL1B L2
ENSG00000243725 TTC4 234938 sc-eQTL 5.98e-01 0.0549 0.104 0.72 cMono_IL1B L2
ENSG00000116133 DHCR24 63604 sc-eQTL 3.32e-01 0.0547 0.0563 0.72 cMono_S100A L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 9.36e-01 -0.00696 0.0861 0.72 cMono_S100A L2
ENSG00000116209 TMEM59 897295 sc-eQTL 3.57e-01 -0.0634 0.0687 0.72 cMono_S100A L2
ENSG00000116221 MRPL37 766758 sc-eQTL 2.77e-02 0.218 0.0984 0.72 cMono_S100A L2
ENSG00000157216 SSBP3 537320 sc-eQTL 5.92e-02 -0.194 0.102 0.72 cMono_S100A L2
ENSG00000162402 USP24 -264565 sc-eQTL 1.37e-01 0.124 0.0832 0.72 cMono_S100A L2
ENSG00000243725 TTC4 234938 sc-eQTL 9.16e-01 -0.011 0.105 0.72 cMono_S100A L2
ENSG00000006555 TTC22 149476 sc-eQTL 7.66e-01 -0.0289 0.0973 0.709 gdT L2
ENSG00000116133 DHCR24 63604 sc-eQTL 8.73e-01 0.0174 0.108 0.709 gdT L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 7.73e-01 0.0315 0.109 0.709 gdT L2
ENSG00000116209 TMEM59 897295 sc-eQTL 2.28e-01 0.133 0.11 0.709 gdT L2
ENSG00000116221 MRPL37 766758 sc-eQTL 9.61e-01 -0.00621 0.127 0.709 gdT L2
ENSG00000157216 SSBP3 537320 sc-eQTL 3.02e-01 -0.08 0.0773 0.709 gdT L2
ENSG00000162402 USP24 -264565 sc-eQTL 9.97e-01 0.000422 0.104 0.709 gdT L2
ENSG00000215883 CYB5RL 750763 sc-eQTL 5.36e-02 -0.208 0.107 0.709 gdT L2
ENSG00000243725 TTC4 234938 sc-eQTL 3.13e-01 -0.123 0.122 0.709 gdT L2
ENSG00000116133 DHCR24 63604 sc-eQTL 3.52e-01 0.0712 0.0763 0.72 intMono L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 2.65e-01 0.106 0.0949 0.72 intMono L2
ENSG00000116209 TMEM59 897295 sc-eQTL 9.62e-01 0.0033 0.07 0.72 intMono L2
ENSG00000116221 MRPL37 766758 sc-eQTL 7.02e-01 0.041 0.107 0.72 intMono L2
ENSG00000157216 SSBP3 537320 sc-eQTL 6.22e-03 -0.296 0.107 0.72 intMono L2
ENSG00000162402 USP24 -264565 sc-eQTL 8.50e-01 -0.0185 0.0974 0.72 intMono L2
ENSG00000243725 TTC4 234938 sc-eQTL 6.09e-01 0.0531 0.104 0.72 intMono L2
ENSG00000116133 DHCR24 63604 sc-eQTL 6.29e-01 0.0364 0.0752 0.715 ncMono L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 9.53e-02 -0.157 0.0934 0.715 ncMono L2
ENSG00000116209 TMEM59 897295 sc-eQTL 6.30e-01 -0.0362 0.0752 0.715 ncMono L2
ENSG00000116221 MRPL37 766758 sc-eQTL 9.36e-02 0.162 0.0964 0.715 ncMono L2
ENSG00000157216 SSBP3 537320 sc-eQTL 2.45e-01 -0.123 0.106 0.715 ncMono L2
ENSG00000162402 USP24 -264565 sc-eQTL 6.13e-01 -0.043 0.0848 0.715 ncMono L2
ENSG00000243725 TTC4 234938 sc-eQTL 1.75e-01 0.136 0.0999 0.715 ncMono L2
ENSG00000116133 DHCR24 63604 sc-eQTL 8.48e-01 -0.0177 0.092 0.729 pDC L2
ENSG00000116205 TCEANC2 897215 sc-eQTL 9.72e-01 0.00387 0.11 0.729 pDC L2
ENSG00000116209 TMEM59 897295 sc-eQTL 1.70e-01 0.121 0.0876 0.729 pDC L2
ENSG00000116221 MRPL37 766758 sc-eQTL 9.79e-01 0.00306 0.117 0.729 pDC L2
ENSG00000157216 SSBP3 537320 sc-eQTL 2.35e-01 0.123 0.104 0.729 pDC L2
ENSG00000162390 ACOT11 408542 sc-eQTL 9.03e-01 -0.00534 0.0437 0.729 pDC L2
ENSG00000162402 USP24 -264565 sc-eQTL 7.68e-01 0.0218 0.0738 0.729 pDC L2
ENSG00000215883 CYB5RL 750763 sc-eQTL 3.85e-01 0.0878 0.101 0.729 pDC L2
ENSG00000243725 TTC4 234938 sc-eQTL 5.50e-01 -0.0697 0.116 0.729 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 149476 sc-eQTL 1.37e-01 -0.144 0.0963 0.72 B_Memory LOneK1K
ENSG00000116133 DHCR24 63604 sc-eQTL 4.14e-01 0.0794 0.0971 0.72 B_Memory LOneK1K
ENSG00000116205 TCEANC2 897215 sc-eQTL 7.54e-01 0.0295 0.0939 0.72 B_Memory LOneK1K
ENSG00000116209 TMEM59 897295 sc-eQTL 2.26e-01 -0.0885 0.0728 0.72 B_Memory LOneK1K
ENSG00000116221 MRPL37 766758 sc-eQTL 8.56e-03 -0.229 0.0861 0.72 B_Memory LOneK1K
ENSG00000157216 SSBP3 537320 sc-eQTL 3.18e-01 0.076 0.0759 0.72 B_Memory LOneK1K
ENSG00000162402 USP24 -264565 sc-eQTL 4.05e-02 0.142 0.0687 0.72 B_Memory LOneK1K
ENSG00000215883 CYB5RL 750763 sc-eQTL 5.73e-01 0.0602 0.107 0.72 B_Memory LOneK1K
ENSG00000243725 TTC4 234938 sc-eQTL 1.64e-01 -0.133 0.0954 0.72 B_Memory LOneK1K
ENSG00000006555 TTC22 149476 sc-eQTL 5.52e-01 0.0613 0.103 0.72 B_Naive LOneK1K
ENSG00000116133 DHCR24 63604 sc-eQTL 3.61e-01 0.0849 0.0927 0.72 B_Naive LOneK1K
ENSG00000116205 TCEANC2 897215 sc-eQTL 3.26e-01 0.0825 0.0837 0.72 B_Naive LOneK1K
ENSG00000116209 TMEM59 897295 sc-eQTL 3.93e-01 0.051 0.0595 0.72 B_Naive LOneK1K
ENSG00000116221 MRPL37 766758 sc-eQTL 5.96e-01 0.0456 0.0857 0.72 B_Naive LOneK1K
ENSG00000157216 SSBP3 537320 sc-eQTL 1.65e-01 -0.106 0.0764 0.72 B_Naive LOneK1K
ENSG00000162402 USP24 -264565 sc-eQTL 7.30e-01 -0.0228 0.0658 0.72 B_Naive LOneK1K
ENSG00000215883 CYB5RL 750763 sc-eQTL 5.36e-03 -0.288 0.102 0.72 B_Naive LOneK1K
ENSG00000243725 TTC4 234938 sc-eQTL 7.11e-01 0.0363 0.098 0.72 B_Naive LOneK1K
ENSG00000116133 DHCR24 63604 sc-eQTL 8.43e-01 0.0117 0.0588 0.72 CD14_Mono LOneK1K
ENSG00000116205 TCEANC2 897215 sc-eQTL 4.25e-01 0.0587 0.0735 0.72 CD14_Mono LOneK1K
ENSG00000116209 TMEM59 897295 sc-eQTL 6.00e-01 -0.0266 0.0507 0.72 CD14_Mono LOneK1K
ENSG00000116221 MRPL37 766758 sc-eQTL 3.93e-01 0.0767 0.0897 0.72 CD14_Mono LOneK1K
ENSG00000157216 SSBP3 537320 sc-eQTL 4.06e-03 -0.268 0.0922 0.72 CD14_Mono LOneK1K
ENSG00000162402 USP24 -264565 sc-eQTL 9.98e-01 0.000136 0.0643 0.72 CD14_Mono LOneK1K
ENSG00000243725 TTC4 234938 sc-eQTL 8.04e-01 0.0265 0.107 0.72 CD14_Mono LOneK1K
ENSG00000116133 DHCR24 63604 sc-eQTL 7.20e-01 0.0257 0.0716 0.718 CD16_Mono LOneK1K
ENSG00000116205 TCEANC2 897215 sc-eQTL 6.68e-01 -0.0404 0.094 0.718 CD16_Mono LOneK1K
ENSG00000116209 TMEM59 897295 sc-eQTL 7.33e-01 -0.0239 0.0699 0.718 CD16_Mono LOneK1K
ENSG00000116221 MRPL37 766758 sc-eQTL 7.62e-02 0.17 0.0951 0.718 CD16_Mono LOneK1K
ENSG00000157216 SSBP3 537320 sc-eQTL 1.29e-02 -0.253 0.101 0.718 CD16_Mono LOneK1K
ENSG00000162402 USP24 -264565 sc-eQTL 7.32e-01 -0.0277 0.0806 0.718 CD16_Mono LOneK1K
ENSG00000243725 TTC4 234938 sc-eQTL 1.93e-01 0.131 0.101 0.718 CD16_Mono LOneK1K
ENSG00000006555 TTC22 149476 sc-eQTL 6.45e-01 0.0391 0.0847 0.718 NK_CD56dim LOneK1K
ENSG00000116133 DHCR24 63604 sc-eQTL 6.26e-03 0.24 0.087 0.718 NK_CD56dim LOneK1K
ENSG00000116205 TCEANC2 897215 sc-eQTL 3.55e-01 0.0803 0.0867 0.718 NK_CD56dim LOneK1K
ENSG00000116209 TMEM59 897295 sc-eQTL 4.67e-02 0.133 0.0665 0.718 NK_CD56dim LOneK1K
ENSG00000116221 MRPL37 766758 sc-eQTL 5.49e-01 0.054 0.0899 0.718 NK_CD56dim LOneK1K
ENSG00000157216 SSBP3 537320 sc-eQTL 3.32e-02 -0.157 0.073 0.718 NK_CD56dim LOneK1K
ENSG00000162398 LEXM 144736 sc-eQTL 9.35e-01 0.00681 0.0832 0.718 NK_CD56dim LOneK1K
ENSG00000162402 USP24 -264565 sc-eQTL 6.24e-01 0.0259 0.0527 0.718 NK_CD56dim LOneK1K
ENSG00000243725 TTC4 234938 sc-eQTL 3.72e-01 0.0839 0.0938 0.718 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000157216 SSBP3 537320 eQTL 0.0251 -0.0336 0.015 0.0 0.0 0.288

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116133 \N 63604 7.88e-05 2.58e-05 4.17e-06 1.27e-05 5.76e-06 2.21e-05 3.74e-05 3.25e-06 2.13e-05 1.17e-05 3.19e-05 9.68e-06 4.46e-05 1.05e-05 9.07e-06 1.77e-05 1.05e-05 3.05e-05 5.66e-06 4.22e-06 1.15e-05 3.06e-05 2.43e-05 7.51e-06 4.24e-05 7.28e-06 1.27e-05 1.12e-05 2.25e-05 2.15e-05 1.55e-05 1.06e-06 1.91e-06 4.75e-06 8.27e-06 3.83e-06 2.36e-06 3.05e-06 3.15e-06 2.92e-06 1.63e-06 3.18e-05 3.74e-06 1.97e-07 1.91e-06 2.69e-06 3.39e-06 7.67e-07 5.34e-07
ENSG00000234810 \N -378489 4.35e-05 1.56e-05 1.43e-06 5.85e-06 2.45e-06 9.07e-06 1.7e-05 1.69e-06 8.81e-06 5.45e-06 1.5e-05 5.15e-06 1.82e-05 3.88e-06 5.36e-06 8.42e-06 5.03e-06 1.52e-05 2.72e-06 2.62e-06 6.26e-06 1.4e-05 1.03e-05 3.3e-06 2.21e-05 4.43e-06 7.15e-06 4.83e-06 1.2e-05 9.08e-06 6.63e-06 4.16e-07 8.87e-07 2.77e-06 3.69e-06 1.29e-06 1.76e-06 1.97e-06 1.62e-06 1.11e-06 6.6e-07 1.85e-05 1.63e-06 1.54e-07 7.16e-07 1.62e-06 9.78e-07 6.58e-07 4.68e-07