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Genes within 1Mb (chr1:54947688:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 146365 sc-eQTL 7.54e-01 -0.0319 0.101 0.763 B L1
ENSG00000116133 DHCR24 60493 sc-eQTL 8.53e-01 0.0178 0.096 0.763 B L1
ENSG00000116205 TCEANC2 894104 sc-eQTL 3.67e-01 0.0747 0.0827 0.763 B L1
ENSG00000116209 TMEM59 894184 sc-eQTL 5.65e-01 -0.0291 0.0504 0.763 B L1
ENSG00000116221 MRPL37 763647 sc-eQTL 8.66e-01 -0.0112 0.066 0.763 B L1
ENSG00000157216 SSBP3 534209 sc-eQTL 5.30e-01 0.0435 0.0691 0.763 B L1
ENSG00000162402 USP24 -267676 sc-eQTL 2.25e-01 0.0711 0.0584 0.763 B L1
ENSG00000215883 CYB5RL 747652 sc-eQTL 3.76e-02 -0.234 0.112 0.763 B L1
ENSG00000243725 TTC4 231827 sc-eQTL 6.55e-01 0.0439 0.0981 0.763 B L1
ENSG00000006555 TTC22 146365 sc-eQTL 1.69e-02 0.187 0.0778 0.763 CD4T L1
ENSG00000116205 TCEANC2 894104 sc-eQTL 8.78e-01 0.00995 0.0645 0.763 CD4T L1
ENSG00000116209 TMEM59 894184 sc-eQTL 2.51e-01 0.069 0.0599 0.763 CD4T L1
ENSG00000116221 MRPL37 763647 sc-eQTL 1.40e-01 -0.122 0.0826 0.763 CD4T L1
ENSG00000157216 SSBP3 534209 sc-eQTL 1.02e-01 0.112 0.0685 0.763 CD4T L1
ENSG00000162402 USP24 -267676 sc-eQTL 9.49e-01 0.00361 0.0562 0.763 CD4T L1
ENSG00000243725 TTC4 231827 sc-eQTL 4.18e-02 0.171 0.0837 0.763 CD4T L1
ENSG00000006555 TTC22 146365 sc-eQTL 9.16e-02 0.116 0.0683 0.763 CD8T L1
ENSG00000116205 TCEANC2 894104 sc-eQTL 8.23e-01 -0.0192 0.0856 0.763 CD8T L1
ENSG00000116209 TMEM59 894184 sc-eQTL 6.86e-01 0.024 0.0594 0.763 CD8T L1
ENSG00000116221 MRPL37 763647 sc-eQTL 1.91e-01 0.107 0.0815 0.763 CD8T L1
ENSG00000157216 SSBP3 534209 sc-eQTL 4.22e-01 0.0472 0.0587 0.763 CD8T L1
ENSG00000162402 USP24 -267676 sc-eQTL 3.49e-01 0.0533 0.0567 0.763 CD8T L1
ENSG00000243725 TTC4 231827 sc-eQTL 9.15e-01 -0.0106 0.0986 0.763 CD8T L1
ENSG00000116133 DHCR24 60493 sc-eQTL 1.60e-02 0.217 0.0893 0.764 DC L1
ENSG00000116205 TCEANC2 894104 sc-eQTL 2.86e-01 0.108 0.101 0.764 DC L1
ENSG00000116209 TMEM59 894184 sc-eQTL 4.21e-01 -0.0644 0.0797 0.764 DC L1
ENSG00000116221 MRPL37 763647 sc-eQTL 9.00e-01 -0.0135 0.107 0.764 DC L1
ENSG00000157216 SSBP3 534209 sc-eQTL 2.03e-01 0.122 0.0953 0.764 DC L1
ENSG00000162390 ACOT11 405431 sc-eQTL 8.76e-01 0.0144 0.092 0.764 DC L1
ENSG00000162402 USP24 -267676 sc-eQTL 4.67e-01 0.0404 0.0554 0.764 DC L1
ENSG00000215883 CYB5RL 747652 sc-eQTL 3.40e-01 -0.0958 0.1 0.764 DC L1
ENSG00000243725 TTC4 231827 sc-eQTL 4.16e-01 0.0879 0.108 0.764 DC L1
ENSG00000116133 DHCR24 60493 sc-eQTL 3.31e-01 0.0639 0.0655 0.763 Mono L1
ENSG00000116205 TCEANC2 894104 sc-eQTL 9.22e-01 0.00698 0.0708 0.763 Mono L1
ENSG00000116209 TMEM59 894184 sc-eQTL 5.99e-01 -0.0277 0.0526 0.763 Mono L1
ENSG00000116221 MRPL37 763647 sc-eQTL 3.98e-01 0.0744 0.0879 0.763 Mono L1
ENSG00000157216 SSBP3 534209 sc-eQTL 3.49e-03 -0.292 0.0988 0.763 Mono L1
ENSG00000162402 USP24 -267676 sc-eQTL 3.12e-01 -0.0608 0.06 0.763 Mono L1
ENSG00000243725 TTC4 231827 sc-eQTL 2.43e-01 0.123 0.105 0.763 Mono L1
ENSG00000006555 TTC22 146365 sc-eQTL 5.47e-01 0.0547 0.0907 0.762 NK L1
ENSG00000116133 DHCR24 60493 sc-eQTL 1.24e-01 0.141 0.0911 0.762 NK L1
ENSG00000116205 TCEANC2 894104 sc-eQTL 5.42e-01 0.0552 0.0903 0.762 NK L1
ENSG00000116209 TMEM59 894184 sc-eQTL 2.15e-01 0.0877 0.0706 0.762 NK L1
ENSG00000116221 MRPL37 763647 sc-eQTL 8.96e-01 -0.0115 0.088 0.762 NK L1
ENSG00000157216 SSBP3 534209 sc-eQTL 1.32e-01 -0.115 0.0759 0.762 NK L1
ENSG00000162398 LEXM 141625 sc-eQTL 7.02e-01 0.0328 0.0856 0.762 NK L1
ENSG00000162402 USP24 -267676 sc-eQTL 6.45e-01 -0.0239 0.0519 0.762 NK L1
ENSG00000243725 TTC4 231827 sc-eQTL 3.73e-01 0.0875 0.098 0.762 NK L1
ENSG00000006555 TTC22 146365 sc-eQTL 1.38e-01 0.119 0.0802 0.763 Other_T L1
ENSG00000116133 DHCR24 60493 sc-eQTL 9.98e-01 0.000177 0.0625 0.763 Other_T L1
ENSG00000116205 TCEANC2 894104 sc-eQTL 8.01e-01 0.0237 0.0936 0.763 Other_T L1
ENSG00000116209 TMEM59 894184 sc-eQTL 3.83e-01 0.0561 0.0641 0.763 Other_T L1
ENSG00000116221 MRPL37 763647 sc-eQTL 3.32e-02 -0.128 0.0595 0.763 Other_T L1
ENSG00000157216 SSBP3 534209 sc-eQTL 7.86e-01 -0.0189 0.0696 0.763 Other_T L1
ENSG00000162402 USP24 -267676 sc-eQTL 4.94e-01 -0.0507 0.074 0.763 Other_T L1
ENSG00000215883 CYB5RL 747652 sc-eQTL 4.19e-01 0.0819 0.101 0.763 Other_T L1
ENSG00000243725 TTC4 231827 sc-eQTL 7.12e-01 -0.0373 0.101 0.763 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 146365 sc-eQTL 2.16e-01 -0.109 0.0882 0.758 B_Activated L2
ENSG00000116133 DHCR24 60493 sc-eQTL 9.75e-01 0.0033 0.104 0.758 B_Activated L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 4.78e-01 -0.0792 0.112 0.758 B_Activated L2
ENSG00000116209 TMEM59 894184 sc-eQTL 3.08e-01 -0.121 0.118 0.758 B_Activated L2
ENSG00000116221 MRPL37 763647 sc-eQTL 7.35e-01 -0.0435 0.128 0.758 B_Activated L2
ENSG00000157216 SSBP3 534209 sc-eQTL 4.68e-01 -0.0843 0.116 0.758 B_Activated L2
ENSG00000162402 USP24 -267676 sc-eQTL 1.22e-01 0.175 0.112 0.758 B_Activated L2
ENSG00000215883 CYB5RL 747652 sc-eQTL 8.78e-01 0.0154 0.0999 0.758 B_Activated L2
ENSG00000243725 TTC4 231827 sc-eQTL 7.61e-01 -0.033 0.108 0.758 B_Activated L2
ENSG00000006555 TTC22 146365 sc-eQTL 8.28e-01 -0.0234 0.108 0.764 B_Intermediate L2
ENSG00000116133 DHCR24 60493 sc-eQTL 7.11e-01 -0.0372 0.1 0.764 B_Intermediate L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 5.82e-01 -0.0549 0.0996 0.764 B_Intermediate L2
ENSG00000116209 TMEM59 894184 sc-eQTL 5.25e-01 -0.0543 0.0852 0.764 B_Intermediate L2
ENSG00000116221 MRPL37 763647 sc-eQTL 2.69e-01 -0.111 0.1 0.764 B_Intermediate L2
ENSG00000157216 SSBP3 534209 sc-eQTL 2.12e-01 0.117 0.0934 0.764 B_Intermediate L2
ENSG00000162402 USP24 -267676 sc-eQTL 6.01e-01 0.0414 0.0789 0.764 B_Intermediate L2
ENSG00000215883 CYB5RL 747652 sc-eQTL 5.59e-01 0.0654 0.112 0.764 B_Intermediate L2
ENSG00000243725 TTC4 231827 sc-eQTL 8.66e-01 -0.0171 0.102 0.764 B_Intermediate L2
ENSG00000006555 TTC22 146365 sc-eQTL 7.97e-01 0.0266 0.104 0.763 B_Memory L2
ENSG00000116133 DHCR24 60493 sc-eQTL 3.39e-01 -0.0983 0.103 0.763 B_Memory L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 5.98e-02 0.206 0.109 0.763 B_Memory L2
ENSG00000116209 TMEM59 894184 sc-eQTL 9.10e-01 0.0104 0.0917 0.763 B_Memory L2
ENSG00000116221 MRPL37 763647 sc-eQTL 9.11e-01 -0.0104 0.0929 0.763 B_Memory L2
ENSG00000157216 SSBP3 534209 sc-eQTL 4.76e-01 0.0617 0.0866 0.763 B_Memory L2
ENSG00000162402 USP24 -267676 sc-eQTL 7.90e-01 -0.0226 0.0847 0.763 B_Memory L2
ENSG00000215883 CYB5RL 747652 sc-eQTL 9.82e-01 0.00232 0.105 0.763 B_Memory L2
ENSG00000243725 TTC4 231827 sc-eQTL 5.08e-01 -0.0719 0.109 0.763 B_Memory L2
ENSG00000006555 TTC22 146365 sc-eQTL 9.80e-01 0.00271 0.11 0.763 B_Naive1 L2
ENSG00000116133 DHCR24 60493 sc-eQTL 5.63e-01 0.0595 0.103 0.763 B_Naive1 L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 8.46e-01 -0.0179 0.0918 0.763 B_Naive1 L2
ENSG00000116209 TMEM59 894184 sc-eQTL 8.64e-01 -0.0115 0.0667 0.763 B_Naive1 L2
ENSG00000116221 MRPL37 763647 sc-eQTL 3.21e-01 0.0977 0.0982 0.763 B_Naive1 L2
ENSG00000157216 SSBP3 534209 sc-eQTL 9.25e-01 -0.00883 0.0937 0.763 B_Naive1 L2
ENSG00000162402 USP24 -267676 sc-eQTL 3.39e-01 0.0705 0.0737 0.763 B_Naive1 L2
ENSG00000215883 CYB5RL 747652 sc-eQTL 1.74e-01 -0.151 0.111 0.763 B_Naive1 L2
ENSG00000243725 TTC4 231827 sc-eQTL 4.72e-02 0.199 0.0996 0.763 B_Naive1 L2
ENSG00000006555 TTC22 146365 sc-eQTL 5.58e-01 0.0629 0.107 0.764 B_Naive2 L2
ENSG00000116133 DHCR24 60493 sc-eQTL 1.77e-01 0.126 0.093 0.764 B_Naive2 L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 8.37e-01 0.0213 0.104 0.764 B_Naive2 L2
ENSG00000116209 TMEM59 894184 sc-eQTL 3.90e-01 0.0734 0.0852 0.764 B_Naive2 L2
ENSG00000116221 MRPL37 763647 sc-eQTL 4.54e-01 0.0752 0.1 0.764 B_Naive2 L2
ENSG00000157216 SSBP3 534209 sc-eQTL 3.78e-01 -0.0872 0.0987 0.764 B_Naive2 L2
ENSG00000162402 USP24 -267676 sc-eQTL 8.55e-01 0.0144 0.0784 0.764 B_Naive2 L2
ENSG00000215883 CYB5RL 747652 sc-eQTL 2.35e-02 -0.249 0.109 0.764 B_Naive2 L2
ENSG00000243725 TTC4 231827 sc-eQTL 9.75e-01 0.00364 0.115 0.764 B_Naive2 L2
ENSG00000006555 TTC22 146365 sc-eQTL 7.46e-01 0.0333 0.103 0.761 CD4_CTL L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 7.23e-01 0.0376 0.106 0.761 CD4_CTL L2
ENSG00000116209 TMEM59 894184 sc-eQTL 1.89e-01 -0.126 0.0959 0.761 CD4_CTL L2
ENSG00000116221 MRPL37 763647 sc-eQTL 5.74e-01 -0.0667 0.118 0.761 CD4_CTL L2
ENSG00000157216 SSBP3 534209 sc-eQTL 6.40e-01 -0.0341 0.0728 0.761 CD4_CTL L2
ENSG00000162402 USP24 -267676 sc-eQTL 9.08e-01 -0.0116 0.1 0.761 CD4_CTL L2
ENSG00000243725 TTC4 231827 sc-eQTL 8.20e-01 -0.0255 0.112 0.761 CD4_CTL L2
ENSG00000006555 TTC22 146365 sc-eQTL 9.20e-02 0.156 0.0922 0.763 CD4_Naive L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 4.66e-01 0.0515 0.0705 0.763 CD4_Naive L2
ENSG00000116209 TMEM59 894184 sc-eQTL 4.21e-01 0.0553 0.0685 0.763 CD4_Naive L2
ENSG00000116221 MRPL37 763647 sc-eQTL 4.40e-01 -0.0684 0.0883 0.763 CD4_Naive L2
ENSG00000157216 SSBP3 534209 sc-eQTL 1.00e-01 0.116 0.0702 0.763 CD4_Naive L2
ENSG00000162402 USP24 -267676 sc-eQTL 2.91e-01 -0.0643 0.0608 0.763 CD4_Naive L2
ENSG00000243725 TTC4 231827 sc-eQTL 1.80e-01 0.124 0.0925 0.763 CD4_Naive L2
ENSG00000006555 TTC22 146365 sc-eQTL 2.99e-02 0.211 0.0963 0.763 CD4_TCM L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 7.70e-01 -0.0277 0.0948 0.763 CD4_TCM L2
ENSG00000116209 TMEM59 894184 sc-eQTL 2.58e-01 0.0808 0.0713 0.763 CD4_TCM L2
ENSG00000116221 MRPL37 763647 sc-eQTL 4.54e-01 -0.0674 0.0898 0.763 CD4_TCM L2
ENSG00000157216 SSBP3 534209 sc-eQTL 4.92e-01 0.0607 0.0881 0.763 CD4_TCM L2
ENSG00000162402 USP24 -267676 sc-eQTL 2.34e-01 0.0868 0.0728 0.763 CD4_TCM L2
ENSG00000243725 TTC4 231827 sc-eQTL 3.01e-01 0.109 0.105 0.763 CD4_TCM L2
ENSG00000006555 TTC22 146365 sc-eQTL 8.86e-01 0.0162 0.112 0.763 CD4_TEM L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 4.29e-01 -0.0842 0.106 0.763 CD4_TEM L2
ENSG00000116209 TMEM59 894184 sc-eQTL 2.15e-01 0.102 0.0821 0.763 CD4_TEM L2
ENSG00000116221 MRPL37 763647 sc-eQTL 6.17e-01 -0.053 0.106 0.763 CD4_TEM L2
ENSG00000157216 SSBP3 534209 sc-eQTL 7.51e-03 0.241 0.0894 0.763 CD4_TEM L2
ENSG00000162402 USP24 -267676 sc-eQTL 5.75e-01 0.0464 0.0827 0.763 CD4_TEM L2
ENSG00000243725 TTC4 231827 sc-eQTL 2.34e-02 0.247 0.108 0.763 CD4_TEM L2
ENSG00000006555 TTC22 146365 sc-eQTL 4.79e-01 0.0637 0.0898 0.763 CD8_CTL L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 1.97e-01 0.128 0.0992 0.763 CD8_CTL L2
ENSG00000116209 TMEM59 894184 sc-eQTL 5.07e-01 -0.0575 0.0865 0.763 CD8_CTL L2
ENSG00000116221 MRPL37 763647 sc-eQTL 9.83e-01 0.00217 0.103 0.763 CD8_CTL L2
ENSG00000157216 SSBP3 534209 sc-eQTL 6.51e-01 -0.0317 0.0701 0.763 CD8_CTL L2
ENSG00000162402 USP24 -267676 sc-eQTL 4.99e-01 0.0472 0.0697 0.763 CD8_CTL L2
ENSG00000243725 TTC4 231827 sc-eQTL 5.39e-03 -0.288 0.102 0.763 CD8_CTL L2
ENSG00000006555 TTC22 146365 sc-eQTL 7.61e-01 0.0309 0.101 0.763 CD8_Naive L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 2.17e-01 -0.113 0.0912 0.763 CD8_Naive L2
ENSG00000116209 TMEM59 894184 sc-eQTL 8.45e-01 -0.0175 0.0895 0.763 CD8_Naive L2
ENSG00000116221 MRPL37 763647 sc-eQTL 3.85e-02 0.222 0.106 0.763 CD8_Naive L2
ENSG00000157216 SSBP3 534209 sc-eQTL 3.09e-01 0.0826 0.0811 0.763 CD8_Naive L2
ENSG00000162402 USP24 -267676 sc-eQTL 8.11e-02 0.129 0.0734 0.763 CD8_Naive L2
ENSG00000243725 TTC4 231827 sc-eQTL 7.42e-01 -0.0356 0.108 0.763 CD8_Naive L2
ENSG00000006555 TTC22 146365 sc-eQTL 3.46e-01 0.104 0.11 0.775 CD8_TCM L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 3.67e-01 0.1 0.111 0.775 CD8_TCM L2
ENSG00000116209 TMEM59 894184 sc-eQTL 9.80e-01 -0.00251 0.0976 0.775 CD8_TCM L2
ENSG00000116221 MRPL37 763647 sc-eQTL 3.22e-01 -0.11 0.11 0.775 CD8_TCM L2
ENSG00000157216 SSBP3 534209 sc-eQTL 3.89e-01 0.0828 0.0959 0.775 CD8_TCM L2
ENSG00000162402 USP24 -267676 sc-eQTL 2.99e-01 -0.0967 0.0929 0.775 CD8_TCM L2
ENSG00000243725 TTC4 231827 sc-eQTL 1.25e-02 0.281 0.111 0.775 CD8_TCM L2
ENSG00000006555 TTC22 146365 sc-eQTL 7.62e-01 0.0318 0.105 0.76 CD8_TEM L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 6.04e-02 -0.205 0.109 0.76 CD8_TEM L2
ENSG00000116209 TMEM59 894184 sc-eQTL 7.43e-01 0.0349 0.106 0.76 CD8_TEM L2
ENSG00000116221 MRPL37 763647 sc-eQTL 1.54e-01 0.153 0.107 0.76 CD8_TEM L2
ENSG00000157216 SSBP3 534209 sc-eQTL 1.68e-01 0.14 0.101 0.76 CD8_TEM L2
ENSG00000162402 USP24 -267676 sc-eQTL 7.09e-01 0.0401 0.107 0.76 CD8_TEM L2
ENSG00000243725 TTC4 231827 sc-eQTL 9.65e-02 0.181 0.108 0.76 CD8_TEM L2
ENSG00000006555 TTC22 146365 sc-eQTL 4.67e-03 0.276 0.0966 0.764 MAIT L2
ENSG00000116133 DHCR24 60493 sc-eQTL 7.18e-01 0.0263 0.0729 0.764 MAIT L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 9.94e-01 -0.000832 0.103 0.764 MAIT L2
ENSG00000116209 TMEM59 894184 sc-eQTL 8.67e-01 -0.0156 0.0927 0.764 MAIT L2
ENSG00000116221 MRPL37 763647 sc-eQTL 5.37e-01 -0.0696 0.113 0.764 MAIT L2
ENSG00000157216 SSBP3 534209 sc-eQTL 6.02e-01 -0.0521 0.0998 0.764 MAIT L2
ENSG00000162402 USP24 -267676 sc-eQTL 3.21e-01 -0.088 0.0885 0.764 MAIT L2
ENSG00000215883 CYB5RL 747652 sc-eQTL 5.64e-01 0.0595 0.103 0.764 MAIT L2
ENSG00000243725 TTC4 231827 sc-eQTL 6.35e-02 -0.19 0.102 0.764 MAIT L2
ENSG00000006555 TTC22 146365 sc-eQTL 5.31e-02 -0.212 0.109 0.76 NK_CD56bright L2
ENSG00000116133 DHCR24 60493 sc-eQTL 8.58e-01 -0.0175 0.0971 0.76 NK_CD56bright L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 5.48e-01 0.0618 0.103 0.76 NK_CD56bright L2
ENSG00000116209 TMEM59 894184 sc-eQTL 7.44e-01 0.0327 0.1 0.76 NK_CD56bright L2
ENSG00000116221 MRPL37 763647 sc-eQTL 8.63e-01 -0.0193 0.112 0.76 NK_CD56bright L2
ENSG00000157216 SSBP3 534209 sc-eQTL 4.46e-02 -0.169 0.0834 0.76 NK_CD56bright L2
ENSG00000162398 LEXM 141625 sc-eQTL 7.59e-01 0.0306 0.0995 0.76 NK_CD56bright L2
ENSG00000162402 USP24 -267676 sc-eQTL 8.70e-01 -0.0141 0.0857 0.76 NK_CD56bright L2
ENSG00000243725 TTC4 231827 sc-eQTL 9.26e-01 0.0101 0.108 0.76 NK_CD56bright L2
ENSG00000006555 TTC22 146365 sc-eQTL 2.36e-01 0.108 0.0906 0.761 NK_CD56dim L2
ENSG00000116133 DHCR24 60493 sc-eQTL 1.02e-02 0.242 0.0933 0.761 NK_CD56dim L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 5.32e-01 0.0642 0.103 0.761 NK_CD56dim L2
ENSG00000116209 TMEM59 894184 sc-eQTL 1.91e-01 0.0994 0.0758 0.761 NK_CD56dim L2
ENSG00000116221 MRPL37 763647 sc-eQTL 6.76e-01 -0.0414 0.099 0.761 NK_CD56dim L2
ENSG00000157216 SSBP3 534209 sc-eQTL 9.83e-02 -0.134 0.0805 0.761 NK_CD56dim L2
ENSG00000162398 LEXM 141625 sc-eQTL 6.22e-01 0.046 0.0931 0.761 NK_CD56dim L2
ENSG00000162402 USP24 -267676 sc-eQTL 2.73e-01 -0.0649 0.0591 0.761 NK_CD56dim L2
ENSG00000243725 TTC4 231827 sc-eQTL 9.66e-01 0.00436 0.101 0.761 NK_CD56dim L2
ENSG00000006555 TTC22 146365 sc-eQTL 9.38e-01 -0.00846 0.109 0.76 NK_HLA L2
ENSG00000116133 DHCR24 60493 sc-eQTL 4.34e-01 -0.0829 0.106 0.76 NK_HLA L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 8.78e-01 -0.0157 0.102 0.76 NK_HLA L2
ENSG00000116209 TMEM59 894184 sc-eQTL 2.95e-01 0.106 0.101 0.76 NK_HLA L2
ENSG00000116221 MRPL37 763647 sc-eQTL 8.84e-01 0.0163 0.112 0.76 NK_HLA L2
ENSG00000157216 SSBP3 534209 sc-eQTL 5.19e-01 -0.0589 0.0911 0.76 NK_HLA L2
ENSG00000162398 LEXM 141625 sc-eQTL 4.06e-01 0.0855 0.103 0.76 NK_HLA L2
ENSG00000162402 USP24 -267676 sc-eQTL 5.15e-01 0.0491 0.0754 0.76 NK_HLA L2
ENSG00000243725 TTC4 231827 sc-eQTL 5.25e-01 0.0716 0.113 0.76 NK_HLA L2
ENSG00000006555 TTC22 146365 sc-eQTL 3.22e-01 0.0953 0.0959 0.761 NK_cytokine L2
ENSG00000116133 DHCR24 60493 sc-eQTL 5.91e-01 0.0522 0.0972 0.761 NK_cytokine L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 8.85e-01 0.014 0.0965 0.761 NK_cytokine L2
ENSG00000116209 TMEM59 894184 sc-eQTL 3.11e-01 0.0795 0.0783 0.761 NK_cytokine L2
ENSG00000116221 MRPL37 763647 sc-eQTL 6.60e-01 0.0426 0.0967 0.761 NK_cytokine L2
ENSG00000157216 SSBP3 534209 sc-eQTL 6.34e-01 -0.0386 0.0811 0.761 NK_cytokine L2
ENSG00000162398 LEXM 141625 sc-eQTL 7.28e-02 0.181 0.101 0.761 NK_cytokine L2
ENSG00000162402 USP24 -267676 sc-eQTL 9.88e-01 0.00103 0.0691 0.761 NK_cytokine L2
ENSG00000243725 TTC4 231827 sc-eQTL 4.29e-01 0.081 0.102 0.761 NK_cytokine L2
ENSG00000006555 TTC22 146365 sc-eQTL 5.23e-01 -0.0767 0.12 0.763 PB L2
ENSG00000116133 DHCR24 60493 sc-eQTL 2.91e-01 -0.112 0.106 0.763 PB L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 4.74e-01 -0.0928 0.129 0.763 PB L2
ENSG00000116209 TMEM59 894184 sc-eQTL 9.80e-01 0.00137 0.0541 0.763 PB L2
ENSG00000116221 MRPL37 763647 sc-eQTL 3.97e-01 -0.0833 0.098 0.763 PB L2
ENSG00000157216 SSBP3 534209 sc-eQTL 7.39e-01 0.0379 0.114 0.763 PB L2
ENSG00000162402 USP24 -267676 sc-eQTL 4.36e-01 -0.101 0.129 0.763 PB L2
ENSG00000215883 CYB5RL 747652 sc-eQTL 7.16e-03 -0.355 0.129 0.763 PB L2
ENSG00000243725 TTC4 231827 sc-eQTL 3.64e-01 -0.113 0.124 0.763 PB L2
ENSG00000006555 TTC22 146365 sc-eQTL 2.03e-01 -0.128 0.1 0.767 Pro_T L2
ENSG00000116133 DHCR24 60493 sc-eQTL 6.10e-01 -0.0436 0.0854 0.767 Pro_T L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 4.34e-01 -0.0816 0.104 0.767 Pro_T L2
ENSG00000116209 TMEM59 894184 sc-eQTL 1.68e-01 0.0998 0.072 0.767 Pro_T L2
ENSG00000116221 MRPL37 763647 sc-eQTL 1.67e-02 -0.169 0.0699 0.767 Pro_T L2
ENSG00000157216 SSBP3 534209 sc-eQTL 3.19e-01 -0.0792 0.0793 0.767 Pro_T L2
ENSG00000162402 USP24 -267676 sc-eQTL 8.77e-02 0.165 0.0963 0.767 Pro_T L2
ENSG00000215883 CYB5RL 747652 sc-eQTL 6.97e-01 0.0373 0.0957 0.767 Pro_T L2
ENSG00000243725 TTC4 231827 sc-eQTL 1.29e-01 0.161 0.106 0.767 Pro_T L2
ENSG00000006555 TTC22 146365 sc-eQTL 3.68e-01 0.088 0.0975 0.763 Treg L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 5.78e-01 0.0583 0.105 0.763 Treg L2
ENSG00000116209 TMEM59 894184 sc-eQTL 8.69e-01 0.0137 0.0827 0.763 Treg L2
ENSG00000116221 MRPL37 763647 sc-eQTL 1.93e-02 -0.238 0.101 0.763 Treg L2
ENSG00000157216 SSBP3 534209 sc-eQTL 9.21e-01 0.0091 0.0913 0.763 Treg L2
ENSG00000162402 USP24 -267676 sc-eQTL 4.67e-01 0.0633 0.0869 0.763 Treg L2
ENSG00000243725 TTC4 231827 sc-eQTL 5.18e-01 0.0708 0.109 0.763 Treg L2
ENSG00000116133 DHCR24 60493 sc-eQTL 1.46e-03 0.284 0.0878 0.763 cDC L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 5.03e-01 0.0713 0.106 0.763 cDC L2
ENSG00000116209 TMEM59 894184 sc-eQTL 1.26e-01 -0.138 0.0899 0.763 cDC L2
ENSG00000116221 MRPL37 763647 sc-eQTL 9.31e-01 0.00997 0.116 0.763 cDC L2
ENSG00000157216 SSBP3 534209 sc-eQTL 6.16e-01 0.0535 0.107 0.763 cDC L2
ENSG00000162390 ACOT11 405431 sc-eQTL 7.43e-01 -0.0325 0.0992 0.763 cDC L2
ENSG00000162402 USP24 -267676 sc-eQTL 9.19e-01 0.0114 0.111 0.763 cDC L2
ENSG00000215883 CYB5RL 747652 sc-eQTL 2.42e-01 -0.112 0.0952 0.763 cDC L2
ENSG00000243725 TTC4 231827 sc-eQTL 1.57e-01 0.161 0.113 0.763 cDC L2
ENSG00000116133 DHCR24 60493 sc-eQTL 7.93e-01 0.0168 0.0637 0.763 cMono_IL1B L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 4.80e-02 0.174 0.0877 0.763 cMono_IL1B L2
ENSG00000116209 TMEM59 894184 sc-eQTL 7.69e-01 -0.0158 0.0537 0.763 cMono_IL1B L2
ENSG00000116221 MRPL37 763647 sc-eQTL 4.22e-01 -0.0768 0.0955 0.763 cMono_IL1B L2
ENSG00000157216 SSBP3 534209 sc-eQTL 8.14e-02 -0.17 0.097 0.763 cMono_IL1B L2
ENSG00000162402 USP24 -267676 sc-eQTL 2.71e-01 -0.0793 0.0719 0.763 cMono_IL1B L2
ENSG00000243725 TTC4 231827 sc-eQTL 7.86e-02 0.194 0.11 0.763 cMono_IL1B L2
ENSG00000116133 DHCR24 60493 sc-eQTL 7.38e-01 0.02 0.0597 0.763 cMono_S100A L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 3.06e-01 -0.0932 0.0909 0.763 cMono_S100A L2
ENSG00000116209 TMEM59 894184 sc-eQTL 2.84e-01 -0.0781 0.0727 0.763 cMono_S100A L2
ENSG00000116221 MRPL37 763647 sc-eQTL 1.90e-02 0.246 0.104 0.763 cMono_S100A L2
ENSG00000157216 SSBP3 534209 sc-eQTL 7.10e-02 -0.197 0.109 0.763 cMono_S100A L2
ENSG00000162402 USP24 -267676 sc-eQTL 2.60e-01 0.0997 0.0883 0.763 cMono_S100A L2
ENSG00000243725 TTC4 231827 sc-eQTL 4.69e-01 -0.0804 0.111 0.763 cMono_S100A L2
ENSG00000006555 TTC22 146365 sc-eQTL 7.35e-01 0.034 0.1 0.748 gdT L2
ENSG00000116133 DHCR24 60493 sc-eQTL 9.00e-01 0.0141 0.112 0.748 gdT L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 5.99e-01 0.0592 0.112 0.748 gdT L2
ENSG00000116209 TMEM59 894184 sc-eQTL 3.55e-01 0.105 0.114 0.748 gdT L2
ENSG00000116221 MRPL37 763647 sc-eQTL 9.09e-01 0.0149 0.131 0.748 gdT L2
ENSG00000157216 SSBP3 534209 sc-eQTL 5.24e-01 -0.051 0.0798 0.748 gdT L2
ENSG00000162402 USP24 -267676 sc-eQTL 7.07e-01 -0.0404 0.107 0.748 gdT L2
ENSG00000215883 CYB5RL 747652 sc-eQTL 1.69e-01 -0.153 0.111 0.748 gdT L2
ENSG00000243725 TTC4 231827 sc-eQTL 3.15e-01 -0.126 0.125 0.748 gdT L2
ENSG00000116133 DHCR24 60493 sc-eQTL 2.10e-01 0.101 0.0807 0.764 intMono L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 7.33e-01 0.0345 0.101 0.764 intMono L2
ENSG00000116209 TMEM59 894184 sc-eQTL 5.11e-01 0.0488 0.0741 0.764 intMono L2
ENSG00000116221 MRPL37 763647 sc-eQTL 9.96e-01 0.000638 0.113 0.764 intMono L2
ENSG00000157216 SSBP3 534209 sc-eQTL 1.59e-02 -0.278 0.114 0.764 intMono L2
ENSG00000162402 USP24 -267676 sc-eQTL 3.69e-01 -0.0927 0.103 0.764 intMono L2
ENSG00000243725 TTC4 231827 sc-eQTL 4.30e-01 0.0868 0.11 0.764 intMono L2
ENSG00000116133 DHCR24 60493 sc-eQTL 3.01e-01 0.0826 0.0797 0.758 ncMono L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 1.78e-01 -0.135 0.0995 0.758 ncMono L2
ENSG00000116209 TMEM59 894184 sc-eQTL 4.95e-01 -0.0546 0.0799 0.758 ncMono L2
ENSG00000116221 MRPL37 763647 sc-eQTL 1.42e-01 0.151 0.103 0.758 ncMono L2
ENSG00000157216 SSBP3 534209 sc-eQTL 1.77e-01 -0.152 0.112 0.758 ncMono L2
ENSG00000162402 USP24 -267676 sc-eQTL 9.75e-01 0.00288 0.0902 0.758 ncMono L2
ENSG00000243725 TTC4 231827 sc-eQTL 4.05e-01 0.0889 0.107 0.758 ncMono L2
ENSG00000116133 DHCR24 60493 sc-eQTL 6.71e-01 0.0411 0.0967 0.771 pDC L2
ENSG00000116205 TCEANC2 894104 sc-eQTL 8.95e-01 -0.0154 0.116 0.771 pDC L2
ENSG00000116209 TMEM59 894184 sc-eQTL 3.24e-01 0.0914 0.0923 0.771 pDC L2
ENSG00000116221 MRPL37 763647 sc-eQTL 9.00e-01 -0.0156 0.123 0.771 pDC L2
ENSG00000157216 SSBP3 534209 sc-eQTL 1.84e-01 0.145 0.109 0.771 pDC L2
ENSG00000162390 ACOT11 405431 sc-eQTL 8.72e-01 -0.0074 0.0459 0.771 pDC L2
ENSG00000162402 USP24 -267676 sc-eQTL 4.64e-01 -0.0568 0.0775 0.771 pDC L2
ENSG00000215883 CYB5RL 747652 sc-eQTL 7.48e-01 0.0341 0.106 0.771 pDC L2
ENSG00000243725 TTC4 231827 sc-eQTL 8.38e-01 -0.0251 0.122 0.771 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000006555 TTC22 146365 sc-eQTL 3.17e-01 -0.103 0.102 0.763 B_Memory LOneK1K
ENSG00000116133 DHCR24 60493 sc-eQTL 5.95e-01 -0.0548 0.103 0.763 B_Memory LOneK1K
ENSG00000116205 TCEANC2 894104 sc-eQTL 6.40e-01 0.0467 0.0996 0.763 B_Memory LOneK1K
ENSG00000116209 TMEM59 894184 sc-eQTL 4.63e-01 -0.0569 0.0774 0.763 B_Memory LOneK1K
ENSG00000116221 MRPL37 763647 sc-eQTL 1.61e-01 -0.13 0.0924 0.763 B_Memory LOneK1K
ENSG00000157216 SSBP3 534209 sc-eQTL 1.84e-01 0.107 0.0804 0.763 B_Memory LOneK1K
ENSG00000162402 USP24 -267676 sc-eQTL 4.19e-01 0.0595 0.0735 0.763 B_Memory LOneK1K
ENSG00000215883 CYB5RL 747652 sc-eQTL 8.01e-01 0.0285 0.113 0.763 B_Memory LOneK1K
ENSG00000243725 TTC4 231827 sc-eQTL 3.25e-01 -0.1 0.101 0.763 B_Memory LOneK1K
ENSG00000006555 TTC22 146365 sc-eQTL 6.06e-01 0.0563 0.109 0.763 B_Naive LOneK1K
ENSG00000116133 DHCR24 60493 sc-eQTL 1.60e-01 0.138 0.0979 0.763 B_Naive LOneK1K
ENSG00000116205 TCEANC2 894104 sc-eQTL 6.18e-01 0.0443 0.0888 0.763 B_Naive LOneK1K
ENSG00000116209 TMEM59 894184 sc-eQTL 5.91e-01 0.034 0.0631 0.763 B_Naive LOneK1K
ENSG00000116221 MRPL37 763647 sc-eQTL 5.29e-01 0.0571 0.0907 0.763 B_Naive LOneK1K
ENSG00000157216 SSBP3 534209 sc-eQTL 4.54e-01 -0.0608 0.0811 0.763 B_Naive LOneK1K
ENSG00000162402 USP24 -267676 sc-eQTL 8.21e-01 0.0158 0.0696 0.763 B_Naive LOneK1K
ENSG00000215883 CYB5RL 747652 sc-eQTL 6.51e-04 -0.371 0.107 0.763 B_Naive LOneK1K
ENSG00000243725 TTC4 231827 sc-eQTL 2.79e-01 0.112 0.103 0.763 B_Naive LOneK1K
ENSG00000116133 DHCR24 60493 sc-eQTL 7.30e-01 0.0214 0.0618 0.763 CD14_Mono LOneK1K
ENSG00000116205 TCEANC2 894104 sc-eQTL 6.10e-01 0.0395 0.0773 0.763 CD14_Mono LOneK1K
ENSG00000116209 TMEM59 894184 sc-eQTL 3.24e-01 -0.0526 0.0533 0.763 CD14_Mono LOneK1K
ENSG00000116221 MRPL37 763647 sc-eQTL 4.82e-01 0.0664 0.0944 0.763 CD14_Mono LOneK1K
ENSG00000157216 SSBP3 534209 sc-eQTL 1.77e-02 -0.233 0.0976 0.763 CD14_Mono LOneK1K
ENSG00000162402 USP24 -267676 sc-eQTL 5.47e-01 -0.0408 0.0675 0.763 CD14_Mono LOneK1K
ENSG00000243725 TTC4 231827 sc-eQTL 3.77e-01 0.0989 0.112 0.763 CD14_Mono LOneK1K
ENSG00000116133 DHCR24 60493 sc-eQTL 2.97e-01 0.0793 0.0758 0.761 CD16_Mono LOneK1K
ENSG00000116205 TCEANC2 894104 sc-eQTL 6.31e-01 -0.0479 0.0998 0.761 CD16_Mono LOneK1K
ENSG00000116209 TMEM59 894184 sc-eQTL 9.33e-01 -0.00621 0.0742 0.761 CD16_Mono LOneK1K
ENSG00000116221 MRPL37 763647 sc-eQTL 7.59e-02 0.18 0.101 0.761 CD16_Mono LOneK1K
ENSG00000157216 SSBP3 534209 sc-eQTL 2.32e-02 -0.245 0.107 0.761 CD16_Mono LOneK1K
ENSG00000162402 USP24 -267676 sc-eQTL 4.56e-01 -0.0638 0.0854 0.761 CD16_Mono LOneK1K
ENSG00000243725 TTC4 231827 sc-eQTL 2.66e-01 0.119 0.107 0.761 CD16_Mono LOneK1K
ENSG00000006555 TTC22 146365 sc-eQTL 1.64e-01 0.123 0.0882 0.761 NK_CD56dim LOneK1K
ENSG00000116133 DHCR24 60493 sc-eQTL 1.11e-01 0.147 0.092 0.761 NK_CD56dim LOneK1K
ENSG00000116205 TCEANC2 894104 sc-eQTL 6.39e-01 0.0426 0.0907 0.761 NK_CD56dim LOneK1K
ENSG00000116209 TMEM59 894184 sc-eQTL 1.05e-01 0.114 0.0698 0.761 NK_CD56dim LOneK1K
ENSG00000116221 MRPL37 763647 sc-eQTL 7.92e-01 0.0248 0.094 0.761 NK_CD56dim LOneK1K
ENSG00000157216 SSBP3 534209 sc-eQTL 1.54e-01 -0.11 0.0768 0.761 NK_CD56dim LOneK1K
ENSG00000162398 LEXM 141625 sc-eQTL 4.07e-01 0.0722 0.0868 0.761 NK_CD56dim LOneK1K
ENSG00000162402 USP24 -267676 sc-eQTL 6.91e-01 -0.0219 0.0551 0.761 NK_CD56dim LOneK1K
ENSG00000243725 TTC4 231827 sc-eQTL 5.36e-01 0.0608 0.0981 0.761 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000157216 SSBP3 534209 eQTL 0.0253 -0.0343 0.0153 0.0 0.0 0.231
ENSG00000162390 ACOT11 405431 eQTL 0.0205 0.0593 0.0255 0.0 0.0 0.231

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116133 \N 60493 8.53e-05 1.27e-05 1.35e-06 6.07e-06 2.4e-06 6.44e-06 1.13e-05 1.26e-06 9.91e-06 5.11e-06 1.24e-05 4.35e-06 1.96e-05 3.8e-06 2e-06 6.75e-06 4.09e-06 9.67e-06 2.19e-06 1.63e-06 4.49e-06 1.18e-05 8.67e-06 1.97e-06 2.11e-05 4.27e-06 4.63e-06 3.11e-06 9.77e-06 9.08e-06 6.74e-06 4.15e-07 8.03e-07 2.77e-06 4.6e-06 2.81e-06 1.08e-06 4.99e-07 1.59e-06 8.19e-07 2.08e-07 1.68e-05 2.67e-06 1.93e-07 6.98e-07 9.29e-07 1.23e-06 5.05e-07 1.53e-07
ENSG00000234810 \N -381600 2.75e-06 9.29e-07 3.58e-07 4.37e-07 1.54e-07 5.88e-07 7.54e-07 1.38e-07 8.66e-07 3.11e-07 1.13e-06 5.53e-07 1.48e-06 2.67e-07 4.48e-07 8.02e-07 7.39e-07 5.5e-07 3.3e-07 8.1e-08 2.61e-07 9.67e-07 6.1e-07 1.58e-07 2.23e-06 3.91e-07 6.03e-07 3.51e-07 6.62e-07 9.22e-07 4.48e-07 3.55e-08 5.38e-08 1.67e-07 3.21e-07 4.53e-07 1.4e-07 8.33e-08 7.72e-08 7.28e-08 5.28e-08 1.53e-06 4.38e-07 1.86e-08 1.71e-07 1.35e-08 1.08e-07 1.77e-08 4.8e-08