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Genes within 1Mb (chr6:137241198:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 21749 sc-eQTL 6.43e-01 0.0381 0.0823 0.769 B L1
ENSG00000029363 BCLAF1 951347 sc-eQTL 2.20e-01 0.0449 0.0365 0.769 B L1
ENSG00000112357 PEX7 418634 sc-eQTL 5.29e-01 0.0613 0.0973 0.769 B L1
ENSG00000112378 PERP -866221 sc-eQTL 1.13e-02 -0.162 0.0635 0.769 B L1
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 3.19e-01 0.0517 0.0518 0.769 B L1
ENSG00000197442 MAP3K5 448721 sc-eQTL 1.03e-01 -0.118 0.0719 0.769 B L1
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 5.88e-01 -0.0443 0.0817 0.769 B L1
ENSG00000027697 IFNGR1 21749 sc-eQTL 4.80e-01 -0.0391 0.0552 0.769 CD4T L1
ENSG00000029363 BCLAF1 951347 sc-eQTL 8.17e-01 0.0097 0.0418 0.769 CD4T L1
ENSG00000112357 PEX7 418634 sc-eQTL 3.31e-01 -0.0865 0.0888 0.769 CD4T L1
ENSG00000112378 PERP -866221 sc-eQTL 6.17e-01 0.0299 0.0597 0.769 CD4T L1
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 5.27e-02 0.108 0.0555 0.769 CD4T L1
ENSG00000197442 MAP3K5 448721 sc-eQTL 1.26e-01 -0.0651 0.0424 0.769 CD4T L1
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 8.65e-01 -0.012 0.0705 0.769 CD4T L1
ENSG00000027697 IFNGR1 21749 sc-eQTL 7.07e-01 -0.0234 0.0622 0.769 CD8T L1
ENSG00000029363 BCLAF1 951347 sc-eQTL 2.20e-01 0.0516 0.042 0.769 CD8T L1
ENSG00000112357 PEX7 418634 sc-eQTL 8.76e-01 0.0163 0.104 0.769 CD8T L1
ENSG00000112378 PERP -866221 sc-eQTL 4.31e-01 0.0535 0.0677 0.769 CD8T L1
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 2.83e-01 0.0562 0.0522 0.769 CD8T L1
ENSG00000197442 MAP3K5 448721 sc-eQTL 8.11e-02 -0.0963 0.0549 0.769 CD8T L1
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 2.32e-02 -0.174 0.076 0.769 CD8T L1
ENSG00000027697 IFNGR1 21749 sc-eQTL 9.61e-01 0.00387 0.0787 0.775 DC L1
ENSG00000029363 BCLAF1 951347 sc-eQTL 2.39e-01 -0.0833 0.0705 0.775 DC L1
ENSG00000112357 PEX7 418634 sc-eQTL 5.45e-01 -0.0671 0.111 0.775 DC L1
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 5.29e-01 0.0529 0.084 0.775 DC L1
ENSG00000135525 MAP7 690379 sc-eQTL 8.30e-03 -0.238 0.0895 0.775 DC L1
ENSG00000197442 MAP3K5 448721 sc-eQTL 1.90e-01 -0.114 0.0869 0.775 DC L1
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 9.43e-01 0.00617 0.0857 0.775 DC L1
ENSG00000286646 AL121933.2 457153 sc-eQTL 8.26e-01 -0.025 0.114 0.775 DC L1
ENSG00000027697 IFNGR1 21749 sc-eQTL 9.85e-01 0.00116 0.0635 0.769 Mono L1
ENSG00000029363 BCLAF1 951347 sc-eQTL 9.38e-01 -0.00424 0.0543 0.769 Mono L1
ENSG00000112357 PEX7 418634 sc-eQTL 6.78e-01 0.0443 0.107 0.769 Mono L1
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 1.04e-01 0.0874 0.0535 0.769 Mono L1
ENSG00000135525 MAP7 690379 sc-eQTL 1.94e-01 -0.122 0.0938 0.769 Mono L1
ENSG00000197442 MAP3K5 448721 sc-eQTL 2.36e-01 -0.0744 0.0626 0.769 Mono L1
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 6.23e-01 -0.0328 0.0667 0.769 Mono L1
ENSG00000286646 AL121933.2 457153 sc-eQTL 2.55e-01 0.0865 0.0759 0.769 Mono L1
ENSG00000027697 IFNGR1 21749 sc-eQTL 9.80e-01 0.00173 0.0704 0.773 NK L1
ENSG00000029363 BCLAF1 951347 sc-eQTL 7.06e-01 0.0141 0.0374 0.773 NK L1
ENSG00000112357 PEX7 418634 sc-eQTL 3.63e-01 0.0989 0.108 0.773 NK L1
ENSG00000112378 PERP -866221 sc-eQTL 8.61e-01 -0.012 0.0685 0.773 NK L1
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 4.15e-01 0.0477 0.0585 0.773 NK L1
ENSG00000197442 MAP3K5 448721 sc-eQTL 5.14e-01 -0.0548 0.0839 0.773 NK L1
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 7.58e-02 -0.147 0.0824 0.773 NK L1
ENSG00000027697 IFNGR1 21749 sc-eQTL 6.89e-01 0.0258 0.0645 0.769 Other_T L1
ENSG00000029363 BCLAF1 951347 sc-eQTL 3.99e-01 -0.0456 0.054 0.769 Other_T L1
ENSG00000112357 PEX7 418634 sc-eQTL 7.61e-01 -0.0321 0.105 0.769 Other_T L1
ENSG00000112378 PERP -866221 sc-eQTL 7.12e-01 0.0312 0.0844 0.769 Other_T L1
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 1.37e-02 0.0984 0.0396 0.769 Other_T L1
ENSG00000146410 MTFR2 990863 sc-eQTL 1.01e-01 -0.0996 0.0604 0.769 Other_T L1
ENSG00000197442 MAP3K5 448721 sc-eQTL 6.93e-03 -0.208 0.0762 0.769 Other_T L1
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 2.69e-01 -0.0881 0.0795 0.769 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 21749 sc-eQTL 2.29e-01 0.127 0.105 0.75 B_Activated L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 8.93e-01 0.0116 0.086 0.75 B_Activated L2
ENSG00000112357 PEX7 418634 sc-eQTL 3.75e-01 0.0925 0.104 0.75 B_Activated L2
ENSG00000112378 PERP -866221 sc-eQTL 9.89e-01 0.000729 0.0539 0.75 B_Activated L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 3.66e-01 0.0945 0.104 0.75 B_Activated L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 7.19e-01 -0.0422 0.117 0.75 B_Activated L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 3.81e-01 0.08 0.0911 0.75 B_Activated L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 9.19e-01 -0.00976 0.096 0.768 B_Intermediate L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 7.99e-01 0.0139 0.0546 0.768 B_Intermediate L2
ENSG00000112357 PEX7 418634 sc-eQTL 2.62e-01 0.113 0.1 0.768 B_Intermediate L2
ENSG00000112378 PERP -866221 sc-eQTL 7.99e-02 -0.16 0.0909 0.768 B_Intermediate L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 3.99e-01 0.0605 0.0717 0.768 B_Intermediate L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 3.69e-01 -0.078 0.0866 0.768 B_Intermediate L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 4.54e-01 -0.0763 0.102 0.768 B_Intermediate L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 4.52e-01 0.0787 0.104 0.767 B_Memory L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 2.84e-01 0.0665 0.0619 0.767 B_Memory L2
ENSG00000112357 PEX7 418634 sc-eQTL 5.42e-01 -0.0645 0.105 0.767 B_Memory L2
ENSG00000112378 PERP -866221 sc-eQTL 3.67e-01 -0.0896 0.0991 0.767 B_Memory L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 1.37e-01 0.101 0.068 0.767 B_Memory L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 9.44e-01 0.00656 0.0934 0.767 B_Memory L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 5.48e-01 -0.0611 0.102 0.767 B_Memory L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 7.61e-01 0.0249 0.0817 0.769 B_Naive1 L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 5.18e-01 0.0302 0.0466 0.769 B_Naive1 L2
ENSG00000112357 PEX7 418634 sc-eQTL 1.60e-01 -0.151 0.107 0.769 B_Naive1 L2
ENSG00000112378 PERP -866221 sc-eQTL 2.14e-01 -0.117 0.0939 0.769 B_Naive1 L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 1.35e-01 0.0816 0.0544 0.769 B_Naive1 L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 8.40e-01 -0.0155 0.0768 0.769 B_Naive1 L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 9.49e-01 -0.00552 0.0857 0.769 B_Naive1 L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 6.50e-01 0.0452 0.0995 0.768 B_Naive2 L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 2.21e-02 0.131 0.057 0.768 B_Naive2 L2
ENSG00000112357 PEX7 418634 sc-eQTL 2.35e-01 0.129 0.109 0.768 B_Naive2 L2
ENSG00000112378 PERP -866221 sc-eQTL 1.07e-01 0.127 0.0788 0.768 B_Naive2 L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 7.88e-01 -0.0214 0.0793 0.768 B_Naive2 L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 2.58e-01 -0.0955 0.0841 0.768 B_Naive2 L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 8.86e-01 -0.0147 0.102 0.768 B_Naive2 L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 4.10e-01 -0.0797 0.0967 0.77 CD4_CTL L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 5.49e-01 -0.0515 0.0858 0.77 CD4_CTL L2
ENSG00000112357 PEX7 418634 sc-eQTL 4.03e-01 0.0898 0.107 0.77 CD4_CTL L2
ENSG00000112378 PERP -866221 sc-eQTL 9.47e-01 -0.00722 0.109 0.77 CD4_CTL L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 8.39e-02 0.109 0.063 0.77 CD4_CTL L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 5.70e-01 -0.0577 0.101 0.77 CD4_CTL L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 1.51e-02 -0.239 0.0973 0.77 CD4_CTL L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 5.97e-01 -0.0277 0.0525 0.769 CD4_Naive L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 7.39e-01 -0.014 0.0421 0.769 CD4_Naive L2
ENSG00000112357 PEX7 418634 sc-eQTL 4.62e-01 -0.073 0.099 0.769 CD4_Naive L2
ENSG00000112378 PERP -866221 sc-eQTL 7.70e-01 0.0239 0.0818 0.769 CD4_Naive L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 1.80e-01 0.0768 0.0571 0.769 CD4_Naive L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 5.09e-01 -0.0279 0.0421 0.769 CD4_Naive L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 9.11e-01 -0.00828 0.0743 0.769 CD4_Naive L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 9.70e-01 0.00271 0.0722 0.769 CD4_TCM L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 9.04e-01 -0.00552 0.0456 0.769 CD4_TCM L2
ENSG00000112357 PEX7 418634 sc-eQTL 2.65e-01 -0.118 0.106 0.769 CD4_TCM L2
ENSG00000112378 PERP -866221 sc-eQTL 2.66e-01 0.0997 0.0893 0.769 CD4_TCM L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 1.21e-01 0.0804 0.0517 0.769 CD4_TCM L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 3.80e-01 -0.0521 0.0591 0.769 CD4_TCM L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 2.50e-01 0.0839 0.0727 0.769 CD4_TCM L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 5.64e-03 0.227 0.0811 0.769 CD4_TEM L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 6.45e-01 -0.027 0.0585 0.769 CD4_TEM L2
ENSG00000112357 PEX7 418634 sc-eQTL 6.25e-01 -0.0521 0.107 0.769 CD4_TEM L2
ENSG00000112378 PERP -866221 sc-eQTL 9.56e-01 0.00478 0.0864 0.769 CD4_TEM L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 2.58e-01 0.062 0.0547 0.769 CD4_TEM L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 3.89e-01 -0.073 0.0845 0.769 CD4_TEM L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 7.98e-01 0.0226 0.0879 0.769 CD4_TEM L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 1.08e-02 0.192 0.0748 0.769 CD8_CTL L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 9.67e-01 0.00212 0.0506 0.769 CD8_CTL L2
ENSG00000112357 PEX7 418634 sc-eQTL 7.77e-01 -0.0296 0.104 0.769 CD8_CTL L2
ENSG00000112378 PERP -866221 sc-eQTL 3.13e-01 0.101 0.1 0.769 CD8_CTL L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 3.10e-01 0.0649 0.0638 0.769 CD8_CTL L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 2.47e-01 -0.104 0.0899 0.769 CD8_CTL L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 5.16e-02 -0.174 0.089 0.769 CD8_CTL L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 5.14e-01 -0.0476 0.0728 0.769 CD8_Naive L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 4.88e-01 0.0352 0.0508 0.769 CD8_Naive L2
ENSG00000112357 PEX7 418634 sc-eQTL 2.60e-01 0.119 0.105 0.769 CD8_Naive L2
ENSG00000112378 PERP -866221 sc-eQTL 4.21e-02 0.162 0.0795 0.769 CD8_Naive L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 1.93e-01 0.0742 0.0567 0.769 CD8_Naive L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 7.39e-01 -0.0225 0.0675 0.769 CD8_Naive L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 6.58e-01 -0.0374 0.0842 0.769 CD8_Naive L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 2.45e-02 -0.217 0.0956 0.764 CD8_TCM L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 7.06e-01 -0.0274 0.0727 0.764 CD8_TCM L2
ENSG00000112357 PEX7 418634 sc-eQTL 7.38e-01 -0.0373 0.111 0.764 CD8_TCM L2
ENSG00000112378 PERP -866221 sc-eQTL 5.94e-01 0.0582 0.109 0.764 CD8_TCM L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 4.10e-01 0.0433 0.0524 0.764 CD8_TCM L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 2.08e-01 0.118 0.0934 0.764 CD8_TCM L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 9.32e-02 -0.161 0.0954 0.764 CD8_TCM L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 2.41e-01 -0.112 0.095 0.776 CD8_TEM L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 7.90e-01 -0.024 0.0899 0.776 CD8_TEM L2
ENSG00000112357 PEX7 418634 sc-eQTL 3.01e-01 0.114 0.109 0.776 CD8_TEM L2
ENSG00000112378 PERP -866221 sc-eQTL 8.45e-01 -0.0223 0.114 0.776 CD8_TEM L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 1.25e-02 0.174 0.0692 0.776 CD8_TEM L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 2.95e-02 -0.236 0.107 0.776 CD8_TEM L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 3.22e-01 -0.103 0.104 0.776 CD8_TEM L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 8.82e-01 0.0114 0.0769 0.773 MAIT L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 3.62e-01 0.0583 0.0638 0.773 MAIT L2
ENSG00000112357 PEX7 418634 sc-eQTL 1.25e-01 -0.16 0.104 0.773 MAIT L2
ENSG00000112378 PERP -866221 sc-eQTL 6.75e-02 0.198 0.108 0.773 MAIT L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 3.37e-02 0.109 0.0512 0.773 MAIT L2
ENSG00000146410 MTFR2 990863 sc-eQTL 7.84e-01 0.0237 0.0862 0.773 MAIT L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 5.47e-02 -0.173 0.0893 0.773 MAIT L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 1.24e-01 -0.147 0.0951 0.773 MAIT L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 9.61e-02 -0.137 0.0817 0.773 NK_CD56bright L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 8.91e-01 -0.00835 0.0607 0.773 NK_CD56bright L2
ENSG00000112357 PEX7 418634 sc-eQTL 6.02e-01 0.056 0.107 0.773 NK_CD56bright L2
ENSG00000112378 PERP -866221 sc-eQTL 7.84e-01 -0.0263 0.096 0.773 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 2.39e-02 0.138 0.0605 0.773 NK_CD56bright L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 4.86e-01 -0.065 0.093 0.773 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 3.74e-01 -0.0867 0.0974 0.773 NK_CD56bright L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 5.00e-01 0.0437 0.0647 0.772 NK_CD56dim L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 1.40e-01 0.0623 0.0421 0.772 NK_CD56dim L2
ENSG00000112357 PEX7 418634 sc-eQTL 9.41e-01 -0.00826 0.112 0.772 NK_CD56dim L2
ENSG00000112378 PERP -866221 sc-eQTL 7.62e-01 0.0238 0.0784 0.772 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 2.70e-01 0.0672 0.0608 0.772 NK_CD56dim L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 7.20e-01 -0.0315 0.0877 0.772 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 1.85e-01 -0.121 0.0909 0.772 NK_CD56dim L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 7.68e-01 0.0249 0.084 0.774 NK_HLA L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 1.00e-01 -0.117 0.0706 0.774 NK_HLA L2
ENSG00000112357 PEX7 418634 sc-eQTL 1.49e-02 0.258 0.105 0.774 NK_HLA L2
ENSG00000112378 PERP -866221 sc-eQTL 3.32e-01 -0.0839 0.0863 0.774 NK_HLA L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 1.15e-01 0.105 0.0661 0.774 NK_HLA L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 2.24e-01 -0.129 0.105 0.774 NK_HLA L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 9.61e-01 0.00529 0.107 0.774 NK_HLA L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 8.11e-01 -0.0164 0.0686 0.772 NK_cytokine L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 9.98e-01 0.000148 0.0512 0.772 NK_cytokine L2
ENSG00000112357 PEX7 418634 sc-eQTL 6.86e-01 0.0436 0.108 0.772 NK_cytokine L2
ENSG00000112378 PERP -866221 sc-eQTL 3.29e-01 0.0797 0.0816 0.772 NK_cytokine L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 3.13e-01 0.0619 0.0611 0.772 NK_cytokine L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 5.75e-01 -0.0473 0.0841 0.772 NK_cytokine L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 6.93e-01 -0.0365 0.0923 0.772 NK_cytokine L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 8.30e-01 -0.0294 0.137 0.781 PB L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 6.29e-01 0.0571 0.118 0.781 PB L2
ENSG00000112357 PEX7 418634 sc-eQTL 4.89e-01 0.0973 0.14 0.781 PB L2
ENSG00000112378 PERP -866221 sc-eQTL 8.02e-01 -0.0221 0.0877 0.781 PB L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 2.54e-01 0.121 0.106 0.781 PB L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 5.20e-01 0.0781 0.121 0.781 PB L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 8.43e-01 0.0253 0.128 0.781 PB L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 1.22e-01 0.13 0.0835 0.767 Pro_T L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 2.79e-02 -0.191 0.0861 0.767 Pro_T L2
ENSG00000112357 PEX7 418634 sc-eQTL 9.41e-01 0.00758 0.102 0.767 Pro_T L2
ENSG00000112378 PERP -866221 sc-eQTL 8.88e-01 -0.0114 0.0811 0.767 Pro_T L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 7.21e-01 0.0183 0.0511 0.767 Pro_T L2
ENSG00000146410 MTFR2 990863 sc-eQTL 2.88e-01 -0.0753 0.0707 0.767 Pro_T L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 8.62e-01 -0.0173 0.0991 0.767 Pro_T L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 7.63e-01 -0.03 0.0993 0.767 Pro_T L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 9.32e-01 -0.00846 0.0985 0.769 Treg L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 6.21e-01 0.0315 0.0636 0.769 Treg L2
ENSG00000112357 PEX7 418634 sc-eQTL 8.91e-01 -0.0143 0.104 0.769 Treg L2
ENSG00000112378 PERP -866221 sc-eQTL 2.33e-01 0.134 0.112 0.769 Treg L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 1.37e-02 0.153 0.0617 0.769 Treg L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 5.85e-01 -0.0371 0.0678 0.769 Treg L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 2.72e-01 0.105 0.0953 0.769 Treg L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 5.63e-01 -0.0496 0.0855 0.773 cDC L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 2.28e-01 -0.104 0.0859 0.773 cDC L2
ENSG00000112357 PEX7 418634 sc-eQTL 8.50e-01 -0.021 0.111 0.773 cDC L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 8.13e-01 -0.02 0.0844 0.773 cDC L2
ENSG00000135525 MAP7 690379 sc-eQTL 1.66e-02 -0.235 0.0971 0.773 cDC L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 3.91e-01 -0.0745 0.0866 0.773 cDC L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 1.36e-01 -0.164 0.109 0.773 cDC L2
ENSG00000286646 AL121933.2 457153 sc-eQTL 8.49e-01 0.0215 0.113 0.773 cDC L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 8.92e-01 0.00795 0.0583 0.769 cMono_IL1B L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 5.99e-01 -0.0329 0.0625 0.769 cMono_IL1B L2
ENSG00000112357 PEX7 418634 sc-eQTL 6.41e-01 0.0489 0.105 0.769 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 1.77e-01 0.0847 0.0625 0.769 cMono_IL1B L2
ENSG00000135525 MAP7 690379 sc-eQTL 1.89e-01 -0.119 0.09 0.769 cMono_IL1B L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 2.54e-01 -0.0744 0.0651 0.769 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 9.35e-01 -0.00545 0.067 0.769 cMono_IL1B L2
ENSG00000286646 AL121933.2 457153 sc-eQTL 8.87e-01 0.0119 0.0839 0.769 cMono_IL1B L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 8.60e-01 -0.012 0.0675 0.769 cMono_S100A L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 5.98e-01 0.0366 0.0693 0.769 cMono_S100A L2
ENSG00000112357 PEX7 418634 sc-eQTL 5.13e-01 -0.071 0.108 0.769 cMono_S100A L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 1.36e-01 0.0893 0.0597 0.769 cMono_S100A L2
ENSG00000135525 MAP7 690379 sc-eQTL 3.85e-01 -0.0877 0.101 0.769 cMono_S100A L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 3.11e-01 -0.0826 0.0814 0.769 cMono_S100A L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 1.29e-01 -0.131 0.0857 0.769 cMono_S100A L2
ENSG00000286646 AL121933.2 457153 sc-eQTL 2.03e-02 0.194 0.083 0.769 cMono_S100A L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 6.01e-01 0.0543 0.104 0.767 gdT L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 6.18e-01 -0.0456 0.0911 0.767 gdT L2
ENSG00000112357 PEX7 418634 sc-eQTL 7.31e-01 -0.0451 0.131 0.767 gdT L2
ENSG00000112378 PERP -866221 sc-eQTL 9.01e-01 -0.0143 0.115 0.767 gdT L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 4.41e-02 0.128 0.0628 0.767 gdT L2
ENSG00000146410 MTFR2 990863 sc-eQTL 3.41e-01 -0.0958 0.1 0.767 gdT L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 7.91e-01 -0.0358 0.135 0.767 gdT L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 5.80e-01 0.064 0.115 0.767 gdT L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 4.67e-01 0.053 0.0727 0.773 intMono L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 5.13e-01 -0.063 0.0961 0.773 intMono L2
ENSG00000112357 PEX7 418634 sc-eQTL 9.26e-01 -0.00919 0.0982 0.773 intMono L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 8.95e-01 -0.00832 0.0629 0.773 intMono L2
ENSG00000135525 MAP7 690379 sc-eQTL 4.05e-01 -0.0805 0.0965 0.773 intMono L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 9.27e-01 -0.00939 0.102 0.773 intMono L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 1.10e-01 -0.149 0.0931 0.773 intMono L2
ENSG00000286646 AL121933.2 457153 sc-eQTL 2.64e-01 0.121 0.108 0.773 intMono L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 8.56e-01 -0.016 0.0877 0.771 ncMono L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 9.24e-01 0.00651 0.0682 0.771 ncMono L2
ENSG00000112357 PEX7 418634 sc-eQTL 8.17e-01 0.0252 0.109 0.771 ncMono L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 1.83e-01 0.103 0.0773 0.771 ncMono L2
ENSG00000135525 MAP7 690379 sc-eQTL 3.71e-01 0.0858 0.0958 0.771 ncMono L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 7.21e-01 0.036 0.101 0.771 ncMono L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 3.76e-01 0.086 0.0969 0.771 ncMono L2
ENSG00000286646 AL121933.2 457153 sc-eQTL 9.10e-01 0.0116 0.102 0.771 ncMono L2
ENSG00000027697 IFNGR1 21749 sc-eQTL 5.21e-01 -0.0649 0.101 0.785 pDC L2
ENSG00000029363 BCLAF1 951347 sc-eQTL 5.74e-01 -0.0427 0.0758 0.785 pDC L2
ENSG00000112357 PEX7 418634 sc-eQTL 5.30e-01 -0.0699 0.111 0.785 pDC L2
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 2.28e-02 0.212 0.0922 0.785 pDC L2
ENSG00000135525 MAP7 690379 sc-eQTL 5.94e-01 -0.0414 0.0777 0.785 pDC L2
ENSG00000197442 MAP3K5 448721 sc-eQTL 3.97e-01 -0.105 0.124 0.785 pDC L2
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 4.36e-01 0.0742 0.0949 0.785 pDC L2
ENSG00000286646 AL121933.2 457153 sc-eQTL 4.77e-01 -0.0816 0.115 0.785 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 21749 sc-eQTL 6.97e-01 0.0331 0.0848 0.769 B_Memory LOneK1K
ENSG00000029363 BCLAF1 951347 sc-eQTL 5.46e-01 0.0288 0.0476 0.769 B_Memory LOneK1K
ENSG00000112357 PEX7 418634 sc-eQTL 4.82e-01 0.0686 0.0974 0.769 B_Memory LOneK1K
ENSG00000112378 PERP -866221 sc-eQTL 4.66e-02 -0.18 0.0898 0.769 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 2.80e-01 0.0646 0.0597 0.769 B_Memory LOneK1K
ENSG00000197442 MAP3K5 448721 sc-eQTL 2.26e-01 -0.0959 0.0789 0.769 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 3.75e-01 -0.0897 0.101 0.769 B_Memory LOneK1K
ENSG00000027697 IFNGR1 21749 sc-eQTL 5.23e-01 0.0551 0.0861 0.769 B_Naive LOneK1K
ENSG00000029363 BCLAF1 951347 sc-eQTL 2.71e-01 0.0436 0.0395 0.769 B_Naive LOneK1K
ENSG00000112357 PEX7 418634 sc-eQTL 9.76e-01 0.00315 0.105 0.769 B_Naive LOneK1K
ENSG00000112378 PERP -866221 sc-eQTL 2.72e-01 -0.103 0.0936 0.769 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 3.76e-01 0.0437 0.0493 0.769 B_Naive LOneK1K
ENSG00000197442 MAP3K5 448721 sc-eQTL 3.93e-01 -0.0618 0.0722 0.769 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 8.25e-01 -0.0195 0.0879 0.769 B_Naive LOneK1K
ENSG00000027697 IFNGR1 21749 sc-eQTL 8.67e-01 0.00989 0.0589 0.769 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 951347 sc-eQTL 7.74e-01 -0.0157 0.0549 0.769 CD14_Mono LOneK1K
ENSG00000112357 PEX7 418634 sc-eQTL 8.62e-01 0.0184 0.106 0.769 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 3.12e-01 0.0551 0.0544 0.769 CD14_Mono LOneK1K
ENSG00000135525 MAP7 690379 sc-eQTL 1.23e-01 -0.146 0.0941 0.769 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 448721 sc-eQTL 1.43e-01 -0.0935 0.0636 0.769 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 4.34e-01 -0.0512 0.0652 0.769 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 457153 sc-eQTL 7.97e-02 0.133 0.0755 0.769 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 21749 sc-eQTL 7.07e-01 0.0267 0.071 0.774 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 951347 sc-eQTL 5.57e-01 0.0377 0.0641 0.774 CD16_Mono LOneK1K
ENSG00000112357 PEX7 418634 sc-eQTL 9.10e-01 0.0121 0.107 0.774 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 4.09e-01 0.0548 0.0663 0.774 CD16_Mono LOneK1K
ENSG00000135525 MAP7 690379 sc-eQTL 9.30e-01 -0.00906 0.104 0.774 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 448721 sc-eQTL 8.42e-01 0.017 0.0851 0.774 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 5.90e-01 -0.048 0.0889 0.774 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 457153 sc-eQTL 6.90e-01 0.0403 0.101 0.774 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 21749 sc-eQTL 4.95e-01 0.0456 0.0666 0.772 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 951347 sc-eQTL 6.76e-01 0.0162 0.0387 0.772 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 418634 sc-eQTL 3.81e-01 0.0985 0.112 0.772 NK_CD56dim LOneK1K
ENSG00000112378 PERP -866221 sc-eQTL 9.68e-01 0.00283 0.0698 0.772 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -626016 sc-eQTL 3.91e-01 0.0522 0.0607 0.772 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 448721 sc-eQTL 4.34e-01 -0.0643 0.082 0.772 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -627035 sc-eQTL 1.36e-01 -0.127 0.0846 0.772 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000182747 SLC35D3 318897 eQTL 0.00408 -0.104 0.0361 0.00104 0.0 0.24
ENSG00000197442 MAP3K5 448721 eQTL 0.0262 0.0317 0.0142 0.0 0.0 0.24

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000182747 SLC35D3 318897 5.58e-06 9.42e-06 9.83e-07 3.69e-06 1.63e-06 2.14e-06 9.22e-06 1.17e-06 6.04e-06 3.1e-06 9.41e-06 3.66e-06 1.14e-05 3.74e-06 1.46e-06 5.49e-06 3.69e-06 3.8e-06 1.87e-06 1.54e-06 2.61e-06 7.77e-06 5.31e-06 1.71e-06 1.13e-05 2.1e-06 3.64e-06 2.3e-06 6.2e-06 5.27e-06 4.13e-06 4.97e-07 7.57e-07 2.15e-06 2.56e-06 1.32e-06 1.27e-06 5.58e-07 9.81e-07 4.71e-07 4.51e-07 1.09e-05 9.1e-07 1.96e-07 3.5e-07 9.91e-07 1.02e-06 4.43e-07 3.4e-07