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Genes within 1Mb (chr6:137219233:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -216 sc-eQTL 4.14e-03 -0.2 0.0691 0.494 B L1
ENSG00000029363 BCLAF1 929382 sc-eQTL 2.66e-01 0.0349 0.0313 0.494 B L1
ENSG00000112357 PEX7 396669 sc-eQTL 3.48e-01 0.0783 0.0832 0.494 B L1
ENSG00000112378 PERP -888186 sc-eQTL 6.49e-01 -0.0252 0.0552 0.494 B L1
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 1.86e-01 0.0588 0.0443 0.494 B L1
ENSG00000197442 MAP3K5 426756 sc-eQTL 3.92e-01 0.0531 0.0618 0.494 B L1
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 2.98e-01 0.0728 0.0698 0.494 B L1
ENSG00000027697 IFNGR1 -216 sc-eQTL 8.96e-07 -0.223 0.044 0.494 CD4T L1
ENSG00000029363 BCLAF1 929382 sc-eQTL 2.95e-01 0.0369 0.0352 0.494 CD4T L1
ENSG00000112357 PEX7 396669 sc-eQTL 9.00e-02 -0.127 0.0746 0.494 CD4T L1
ENSG00000112378 PERP -888186 sc-eQTL 8.19e-01 -0.0115 0.0504 0.494 CD4T L1
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 3.29e-01 0.0461 0.0471 0.494 CD4T L1
ENSG00000197442 MAP3K5 426756 sc-eQTL 4.79e-01 -0.0255 0.0359 0.494 CD4T L1
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 7.23e-01 0.0211 0.0594 0.494 CD4T L1
ENSG00000027697 IFNGR1 -216 sc-eQTL 1.49e-03 -0.169 0.0525 0.494 CD8T L1
ENSG00000029363 BCLAF1 929382 sc-eQTL 3.88e-01 0.0314 0.0363 0.494 CD8T L1
ENSG00000112357 PEX7 396669 sc-eQTL 3.45e-01 0.0846 0.0895 0.494 CD8T L1
ENSG00000112378 PERP -888186 sc-eQTL 2.66e-01 0.0651 0.0584 0.494 CD8T L1
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 5.87e-01 0.0246 0.0452 0.494 CD8T L1
ENSG00000197442 MAP3K5 426756 sc-eQTL 6.45e-01 -0.0221 0.0478 0.494 CD8T L1
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 6.43e-01 -0.0308 0.0664 0.494 CD8T L1
ENSG00000027697 IFNGR1 -216 sc-eQTL 1.82e-02 -0.154 0.0648 0.5 DC L1
ENSG00000029363 BCLAF1 929382 sc-eQTL 4.92e-02 0.116 0.0585 0.5 DC L1
ENSG00000112357 PEX7 396669 sc-eQTL 1.55e-01 0.131 0.092 0.5 DC L1
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 4.09e-01 -0.0579 0.0701 0.5 DC L1
ENSG00000135525 MAP7 668414 sc-eQTL 6.02e-01 -0.0397 0.076 0.5 DC L1
ENSG00000197442 MAP3K5 426756 sc-eQTL 9.58e-01 -0.00382 0.0729 0.5 DC L1
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 9.01e-01 -0.00892 0.0715 0.5 DC L1
ENSG00000286646 AL121933.2 435188 sc-eQTL 5.09e-01 0.0629 0.095 0.5 DC L1
ENSG00000027697 IFNGR1 -216 sc-eQTL 2.76e-17 -0.423 0.0458 0.494 Mono L1
ENSG00000029363 BCLAF1 929382 sc-eQTL 6.35e-01 0.0221 0.0464 0.494 Mono L1
ENSG00000112357 PEX7 396669 sc-eQTL 1.13e-02 -0.23 0.09 0.494 Mono L1
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 9.18e-01 -0.00474 0.0461 0.494 Mono L1
ENSG00000135525 MAP7 668414 sc-eQTL 2.27e-01 -0.0973 0.0803 0.494 Mono L1
ENSG00000197442 MAP3K5 426756 sc-eQTL 9.67e-01 0.0022 0.0538 0.494 Mono L1
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 9.91e-01 0.000658 0.0571 0.494 Mono L1
ENSG00000286646 AL121933.2 435188 sc-eQTL 7.90e-01 0.0174 0.0651 0.494 Mono L1
ENSG00000027697 IFNGR1 -216 sc-eQTL 1.88e-04 -0.22 0.0578 0.494 NK L1
ENSG00000029363 BCLAF1 929382 sc-eQTL 7.03e-01 -0.0121 0.0317 0.494 NK L1
ENSG00000112357 PEX7 396669 sc-eQTL 8.61e-01 0.0162 0.0922 0.494 NK L1
ENSG00000112378 PERP -888186 sc-eQTL 7.41e-01 0.0192 0.0581 0.494 NK L1
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 7.35e-01 0.0168 0.0497 0.494 NK L1
ENSG00000197442 MAP3K5 426756 sc-eQTL 1.93e-01 0.0927 0.0709 0.494 NK L1
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 1.99e-01 0.0904 0.0702 0.494 NK L1
ENSG00000027697 IFNGR1 -216 sc-eQTL 1.59e-02 -0.136 0.0558 0.494 Other_T L1
ENSG00000029363 BCLAF1 929382 sc-eQTL 5.42e-01 -0.029 0.0474 0.494 Other_T L1
ENSG00000112357 PEX7 396669 sc-eQTL 5.94e-01 -0.0493 0.0922 0.494 Other_T L1
ENSG00000112378 PERP -888186 sc-eQTL 5.69e-01 -0.0423 0.074 0.494 Other_T L1
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 8.45e-01 -0.00688 0.0352 0.494 Other_T L1
ENSG00000146410 MTFR2 968898 sc-eQTL 2.43e-01 -0.0623 0.0532 0.494 Other_T L1
ENSG00000197442 MAP3K5 426756 sc-eQTL 9.16e-01 0.00718 0.068 0.494 Other_T L1
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 8.80e-01 -0.0105 0.0699 0.494 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -216 sc-eQTL 2.62e-02 -0.2 0.0892 0.492 B_Activated L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 4.69e-01 -0.0532 0.0734 0.492 B_Activated L2
ENSG00000112357 PEX7 396669 sc-eQTL 3.26e-01 0.0874 0.0888 0.492 B_Activated L2
ENSG00000112378 PERP -888186 sc-eQTL 7.11e-01 -0.0171 0.0461 0.492 B_Activated L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 9.46e-03 0.23 0.0876 0.492 B_Activated L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 4.25e-01 0.0799 0.0999 0.492 B_Activated L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 1.27e-01 0.119 0.0775 0.492 B_Activated L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 1.46e-02 -0.202 0.0819 0.491 B_Intermediate L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 6.19e-01 0.0235 0.0472 0.491 B_Intermediate L2
ENSG00000112357 PEX7 396669 sc-eQTL 8.70e-02 0.148 0.0863 0.491 B_Intermediate L2
ENSG00000112378 PERP -888186 sc-eQTL 8.34e-02 -0.137 0.0787 0.491 B_Intermediate L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 9.87e-01 0.000981 0.0622 0.491 B_Intermediate L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 8.51e-01 0.0141 0.0751 0.491 B_Intermediate L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 2.30e-01 0.106 0.0879 0.491 B_Intermediate L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 1.11e-02 -0.227 0.0885 0.494 B_Memory L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 9.78e-01 -0.00149 0.0534 0.494 B_Memory L2
ENSG00000112357 PEX7 396669 sc-eQTL 3.28e-01 0.0888 0.0905 0.494 B_Memory L2
ENSG00000112378 PERP -888186 sc-eQTL 3.72e-01 0.0763 0.0852 0.494 B_Memory L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 5.52e-01 0.035 0.0587 0.494 B_Memory L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 2.50e-01 0.0924 0.08 0.494 B_Memory L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 3.17e-01 -0.0874 0.0872 0.494 B_Memory L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 6.08e-03 -0.193 0.0697 0.494 B_Naive1 L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 8.92e-01 0.00553 0.0405 0.494 B_Naive1 L2
ENSG00000112357 PEX7 396669 sc-eQTL 7.02e-01 -0.0359 0.0936 0.494 B_Naive1 L2
ENSG00000112378 PERP -888186 sc-eQTL 9.57e-01 -0.00437 0.0819 0.494 B_Naive1 L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 8.58e-02 0.0814 0.0472 0.494 B_Naive1 L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 4.29e-02 0.135 0.0661 0.494 B_Naive1 L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 2.15e-01 0.0922 0.0741 0.494 B_Naive1 L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 5.49e-01 -0.0521 0.0868 0.494 B_Naive2 L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 5.23e-01 0.0322 0.0503 0.494 B_Naive2 L2
ENSG00000112357 PEX7 396669 sc-eQTL 3.19e-01 0.0947 0.0949 0.494 B_Naive2 L2
ENSG00000112378 PERP -888186 sc-eQTL 5.63e-01 -0.0401 0.0692 0.494 B_Naive2 L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 6.62e-01 -0.0303 0.0692 0.494 B_Naive2 L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 6.11e-01 -0.0375 0.0736 0.494 B_Naive2 L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 8.14e-01 -0.0211 0.0895 0.494 B_Naive2 L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 5.82e-02 -0.158 0.0827 0.491 CD4_CTL L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 2.99e-01 0.077 0.0739 0.491 CD4_CTL L2
ENSG00000112357 PEX7 396669 sc-eQTL 3.25e-01 -0.0911 0.0923 0.491 CD4_CTL L2
ENSG00000112378 PERP -888186 sc-eQTL 6.25e-01 -0.0459 0.0938 0.491 CD4_CTL L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 1.59e-01 0.0771 0.0545 0.491 CD4_CTL L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 8.74e-01 0.0138 0.0873 0.491 CD4_CTL L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 7.37e-01 0.0287 0.0852 0.491 CD4_CTL L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 3.13e-05 -0.182 0.0427 0.494 CD4_Naive L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 6.14e-01 0.018 0.0357 0.494 CD4_Naive L2
ENSG00000112357 PEX7 396669 sc-eQTL 3.29e-01 -0.082 0.0838 0.494 CD4_Naive L2
ENSG00000112378 PERP -888186 sc-eQTL 8.29e-01 -0.015 0.0693 0.494 CD4_Naive L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 5.57e-01 0.0286 0.0486 0.494 CD4_Naive L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 6.79e-01 -0.0148 0.0357 0.494 CD4_Naive L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 7.55e-01 0.0197 0.063 0.494 CD4_Naive L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 1.04e-02 -0.157 0.0608 0.494 CD4_TCM L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 2.32e-01 0.0466 0.0389 0.494 CD4_TCM L2
ENSG00000112357 PEX7 396669 sc-eQTL 5.83e-01 -0.0499 0.0906 0.494 CD4_TCM L2
ENSG00000112378 PERP -888186 sc-eQTL 6.15e-01 0.0386 0.0766 0.494 CD4_TCM L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 6.07e-01 0.0229 0.0445 0.494 CD4_TCM L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 1.74e-01 -0.0689 0.0505 0.494 CD4_TCM L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 5.06e-01 -0.0415 0.0623 0.494 CD4_TCM L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 5.55e-05 -0.278 0.0676 0.494 CD4_TEM L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 7.13e-01 0.0183 0.0498 0.494 CD4_TEM L2
ENSG00000112357 PEX7 396669 sc-eQTL 7.04e-01 -0.0345 0.0907 0.494 CD4_TEM L2
ENSG00000112378 PERP -888186 sc-eQTL 2.98e-01 -0.0764 0.0733 0.494 CD4_TEM L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 4.80e-01 0.033 0.0466 0.494 CD4_TEM L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 5.54e-01 0.0427 0.072 0.494 CD4_TEM L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 6.12e-01 -0.038 0.0748 0.494 CD4_TEM L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 1.21e-01 -0.0994 0.0638 0.494 CD8_CTL L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 4.60e-01 0.0316 0.0428 0.494 CD8_CTL L2
ENSG00000112357 PEX7 396669 sc-eQTL 4.82e-01 0.0621 0.0882 0.494 CD8_CTL L2
ENSG00000112378 PERP -888186 sc-eQTL 3.74e-01 0.0755 0.0848 0.494 CD8_CTL L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 6.41e-01 0.0252 0.054 0.494 CD8_CTL L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 8.05e-01 0.0188 0.0762 0.494 CD8_CTL L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 8.61e-01 -0.0133 0.076 0.494 CD8_CTL L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 6.96e-05 -0.251 0.0618 0.494 CD8_Naive L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 7.31e-01 -0.0154 0.0448 0.494 CD8_Naive L2
ENSG00000112357 PEX7 396669 sc-eQTL 7.76e-01 0.0265 0.093 0.494 CD8_Naive L2
ENSG00000112378 PERP -888186 sc-eQTL 7.58e-01 -0.0218 0.0707 0.494 CD8_Naive L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 4.58e-01 0.0372 0.0501 0.494 CD8_Naive L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 7.27e-01 0.0208 0.0595 0.494 CD8_Naive L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 5.76e-01 -0.0415 0.0741 0.494 CD8_Naive L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 7.65e-02 -0.151 0.0845 0.498 CD8_TCM L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 1.45e-01 0.0931 0.0636 0.498 CD8_TCM L2
ENSG00000112357 PEX7 396669 sc-eQTL 4.90e-01 -0.0675 0.0977 0.498 CD8_TCM L2
ENSG00000112378 PERP -888186 sc-eQTL 3.43e-01 0.0908 0.0956 0.498 CD8_TCM L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 2.21e-01 0.0565 0.046 0.498 CD8_TCM L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 4.05e-01 -0.0688 0.0823 0.498 CD8_TCM L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 6.66e-01 -0.0365 0.0845 0.498 CD8_TCM L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 1.74e-02 -0.196 0.0817 0.491 CD8_TEM L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 1.29e-01 0.119 0.0778 0.491 CD8_TEM L2
ENSG00000112357 PEX7 396669 sc-eQTL 7.49e-01 0.0305 0.0954 0.491 CD8_TEM L2
ENSG00000112378 PERP -888186 sc-eQTL 3.36e-01 -0.0955 0.099 0.491 CD8_TEM L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 7.64e-01 0.0184 0.0611 0.491 CD8_TEM L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 5.40e-01 0.0579 0.0945 0.491 CD8_TEM L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 8.14e-01 0.0214 0.0907 0.491 CD8_TEM L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 3.62e-03 -0.189 0.0642 0.498 MAIT L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 5.88e-01 -0.0295 0.0544 0.498 MAIT L2
ENSG00000112357 PEX7 396669 sc-eQTL 7.81e-01 -0.0247 0.0888 0.498 MAIT L2
ENSG00000112378 PERP -888186 sc-eQTL 2.72e-01 -0.102 0.0923 0.498 MAIT L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 7.19e-01 0.0159 0.044 0.498 MAIT L2
ENSG00000146410 MTFR2 968898 sc-eQTL 4.98e-01 0.0498 0.0733 0.498 MAIT L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 5.18e-01 0.0497 0.0767 0.498 MAIT L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 8.99e-01 -0.0103 0.0815 0.498 MAIT L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 3.79e-03 -0.203 0.0694 0.496 NK_CD56bright L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 6.69e-01 -0.0224 0.0522 0.496 NK_CD56bright L2
ENSG00000112357 PEX7 396669 sc-eQTL 2.52e-02 0.206 0.0912 0.496 NK_CD56bright L2
ENSG00000112378 PERP -888186 sc-eQTL 6.51e-01 -0.0375 0.0827 0.496 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 9.83e-01 0.00109 0.0527 0.496 NK_CD56bright L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 7.78e-01 0.0226 0.0802 0.496 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 6.89e-02 0.153 0.0834 0.496 NK_CD56bright L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 1.09e-04 -0.209 0.0529 0.496 NK_CD56dim L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 4.58e-01 -0.0266 0.0358 0.496 NK_CD56dim L2
ENSG00000112357 PEX7 396669 sc-eQTL 1.25e-01 -0.145 0.094 0.496 NK_CD56dim L2
ENSG00000112378 PERP -888186 sc-eQTL 4.26e-01 0.0529 0.0663 0.496 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 8.75e-01 0.00812 0.0517 0.496 NK_CD56dim L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 6.12e-01 0.0378 0.0743 0.496 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 8.08e-01 0.0188 0.0774 0.496 NK_CD56dim L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 2.93e-04 -0.254 0.0688 0.5 NK_HLA L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 7.12e-01 -0.0223 0.0602 0.5 NK_HLA L2
ENSG00000112357 PEX7 396669 sc-eQTL 8.41e-01 -0.0182 0.0904 0.5 NK_HLA L2
ENSG00000112378 PERP -888186 sc-eQTL 6.22e-01 -0.0361 0.0733 0.5 NK_HLA L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 3.52e-01 -0.0525 0.0563 0.5 NK_HLA L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 1.10e-01 0.143 0.089 0.5 NK_HLA L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 6.38e-01 0.0428 0.0908 0.5 NK_HLA L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 4.12e-04 -0.202 0.0563 0.496 NK_cytokine L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 6.08e-01 -0.0222 0.0433 0.496 NK_cytokine L2
ENSG00000112357 PEX7 396669 sc-eQTL 3.06e-01 0.0931 0.0908 0.496 NK_cytokine L2
ENSG00000112378 PERP -888186 sc-eQTL 7.64e-01 0.0208 0.069 0.496 NK_cytokine L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 6.57e-01 0.023 0.0517 0.496 NK_cytokine L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 1.07e-01 0.114 0.0707 0.496 NK_cytokine L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 2.87e-01 0.0831 0.0778 0.496 NK_cytokine L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 9.51e-01 -0.00691 0.113 0.489 PB L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 6.58e-01 0.0432 0.0973 0.489 PB L2
ENSG00000112357 PEX7 396669 sc-eQTL 8.77e-01 -0.018 0.116 0.489 PB L2
ENSG00000112378 PERP -888186 sc-eQTL 2.80e-01 -0.0781 0.072 0.489 PB L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 2.08e-01 -0.11 0.0871 0.489 PB L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 9.39e-02 -0.167 0.0986 0.489 PB L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 2.78e-01 -0.114 0.105 0.489 PB L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 9.42e-01 -0.0053 0.073 0.496 Pro_T L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 3.91e-01 0.0649 0.0755 0.496 Pro_T L2
ENSG00000112357 PEX7 396669 sc-eQTL 6.71e-01 -0.0377 0.0886 0.496 Pro_T L2
ENSG00000112378 PERP -888186 sc-eQTL 1.42e-01 0.103 0.0701 0.496 Pro_T L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 8.69e-02 0.0759 0.0441 0.496 Pro_T L2
ENSG00000146410 MTFR2 968898 sc-eQTL 3.44e-01 -0.0584 0.0615 0.496 Pro_T L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 1.07e-01 0.139 0.0856 0.496 Pro_T L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 7.14e-01 -0.0317 0.0863 0.496 Pro_T L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 2.15e-03 -0.257 0.0826 0.494 Treg L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 2.82e-01 0.0587 0.0544 0.494 Treg L2
ENSG00000112357 PEX7 396669 sc-eQTL 2.02e-02 -0.206 0.0881 0.494 Treg L2
ENSG00000112378 PERP -888186 sc-eQTL 7.43e-02 -0.172 0.0958 0.494 Treg L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 9.34e-01 0.00443 0.0537 0.494 Treg L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 9.64e-01 0.0026 0.0582 0.494 Treg L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 3.66e-01 0.074 0.0817 0.494 Treg L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 5.21e-03 -0.206 0.0727 0.5 cDC L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 6.88e-01 0.0301 0.0748 0.5 cDC L2
ENSG00000112357 PEX7 396669 sc-eQTL 2.32e-01 0.115 0.0957 0.5 cDC L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 5.61e-01 0.0427 0.0731 0.5 cDC L2
ENSG00000135525 MAP7 668414 sc-eQTL 7.27e-01 -0.0299 0.0856 0.5 cDC L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 5.64e-01 0.0435 0.0753 0.5 cDC L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 3.94e-01 -0.0814 0.0952 0.5 cDC L2
ENSG00000286646 AL121933.2 435188 sc-eQTL 8.15e-02 0.17 0.0973 0.5 cDC L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 3.20e-16 -0.387 0.0437 0.494 cMono_IL1B L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 4.76e-01 0.0391 0.0548 0.494 cMono_IL1B L2
ENSG00000112357 PEX7 396669 sc-eQTL 3.22e-02 -0.196 0.091 0.494 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 7.33e-01 0.0188 0.0551 0.494 cMono_IL1B L2
ENSG00000135525 MAP7 668414 sc-eQTL 3.23e-01 -0.0784 0.0791 0.494 cMono_IL1B L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 4.64e-01 -0.042 0.0572 0.494 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 4.57e-01 0.0438 0.0587 0.494 cMono_IL1B L2
ENSG00000286646 AL121933.2 435188 sc-eQTL 9.81e-01 0.00178 0.0736 0.494 cMono_IL1B L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 7.32e-08 -0.311 0.0557 0.494 cMono_S100A L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 2.55e-01 -0.0697 0.0611 0.494 cMono_S100A L2
ENSG00000112357 PEX7 396669 sc-eQTL 1.34e-01 -0.143 0.0953 0.494 cMono_S100A L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 8.55e-01 0.00972 0.053 0.494 cMono_S100A L2
ENSG00000135525 MAP7 668414 sc-eQTL 2.64e-01 -0.0997 0.0891 0.494 cMono_S100A L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 4.20e-02 0.146 0.0714 0.494 cMono_S100A L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 6.17e-01 -0.0381 0.0761 0.494 cMono_S100A L2
ENSG00000286646 AL121933.2 435188 sc-eQTL 3.81e-01 0.0651 0.0742 0.494 cMono_S100A L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 1.19e-01 -0.142 0.0906 0.509 gdT L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 6.43e-01 -0.0373 0.0804 0.509 gdT L2
ENSG00000112357 PEX7 396669 sc-eQTL 1.97e-01 -0.149 0.115 0.509 gdT L2
ENSG00000112378 PERP -888186 sc-eQTL 5.49e-02 -0.193 0.0998 0.509 gdT L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 9.22e-01 0.00551 0.0562 0.509 gdT L2
ENSG00000146410 MTFR2 968898 sc-eQTL 1.58e-01 -0.125 0.088 0.509 gdT L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 4.99e-01 0.0805 0.119 0.509 gdT L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 8.38e-01 -0.0208 0.102 0.509 gdT L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 4.09e-04 -0.22 0.0611 0.496 intMono L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 8.28e-01 0.0181 0.0832 0.496 intMono L2
ENSG00000112357 PEX7 396669 sc-eQTL 5.48e-01 -0.0511 0.0849 0.496 intMono L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 2.07e-01 0.0686 0.0542 0.496 intMono L2
ENSG00000135525 MAP7 668414 sc-eQTL 1.80e-02 0.197 0.0825 0.496 intMono L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 7.90e-01 -0.0236 0.0886 0.496 intMono L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 6.15e-01 0.0408 0.0811 0.496 intMono L2
ENSG00000286646 AL121933.2 435188 sc-eQTL 8.65e-01 -0.016 0.0935 0.496 intMono L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 8.85e-10 -0.428 0.0665 0.498 ncMono L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 5.02e-01 -0.0382 0.0568 0.498 ncMono L2
ENSG00000112357 PEX7 396669 sc-eQTL 7.48e-01 -0.0291 0.0906 0.498 ncMono L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 2.92e-01 -0.0682 0.0646 0.498 ncMono L2
ENSG00000135525 MAP7 668414 sc-eQTL 5.70e-01 0.0455 0.0799 0.498 ncMono L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 6.36e-01 -0.0399 0.0841 0.498 ncMono L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 1.72e-01 -0.11 0.0806 0.498 ncMono L2
ENSG00000286646 AL121933.2 435188 sc-eQTL 6.73e-01 0.0361 0.0853 0.498 ncMono L2
ENSG00000027697 IFNGR1 -216 sc-eQTL 4.95e-01 -0.059 0.0862 0.494 pDC L2
ENSG00000029363 BCLAF1 929382 sc-eQTL 8.16e-05 0.249 0.0616 0.494 pDC L2
ENSG00000112357 PEX7 396669 sc-eQTL 7.24e-01 0.0336 0.0951 0.494 pDC L2
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 8.80e-01 -0.0121 0.0801 0.494 pDC L2
ENSG00000135525 MAP7 668414 sc-eQTL 4.53e-01 -0.0499 0.0663 0.494 pDC L2
ENSG00000197442 MAP3K5 426756 sc-eQTL 2.50e-01 -0.122 0.106 0.494 pDC L2
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 3.10e-01 0.0825 0.081 0.494 pDC L2
ENSG00000286646 AL121933.2 435188 sc-eQTL 2.36e-01 -0.116 0.0975 0.494 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -216 sc-eQTL 1.27e-04 -0.276 0.0708 0.494 B_Memory LOneK1K
ENSG00000029363 BCLAF1 929382 sc-eQTL 9.97e-01 -0.000164 0.0411 0.494 B_Memory LOneK1K
ENSG00000112357 PEX7 396669 sc-eQTL 3.81e-02 0.174 0.0834 0.494 B_Memory LOneK1K
ENSG00000112378 PERP -888186 sc-eQTL 9.69e-01 -0.00304 0.0783 0.494 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 7.08e-01 0.0194 0.0517 0.494 B_Memory LOneK1K
ENSG00000197442 MAP3K5 426756 sc-eQTL 1.98e-01 0.088 0.0682 0.494 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 3.47e-01 0.0822 0.0872 0.494 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -216 sc-eQTL 3.33e-02 -0.16 0.0746 0.494 B_Naive LOneK1K
ENSG00000029363 BCLAF1 929382 sc-eQTL 5.42e-01 0.0212 0.0346 0.494 B_Naive LOneK1K
ENSG00000112357 PEX7 396669 sc-eQTL 9.00e-01 0.0116 0.0918 0.494 B_Naive LOneK1K
ENSG00000112378 PERP -888186 sc-eQTL 7.31e-01 -0.0283 0.0821 0.494 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 3.50e-01 0.0404 0.0431 0.494 B_Naive LOneK1K
ENSG00000197442 MAP3K5 426756 sc-eQTL 3.51e-01 0.0591 0.0632 0.494 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 3.40e-01 0.0734 0.0767 0.494 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -216 sc-eQTL 1.19e-16 -0.394 0.0437 0.494 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 929382 sc-eQTL 6.53e-01 0.0215 0.0478 0.494 CD14_Mono LOneK1K
ENSG00000112357 PEX7 396669 sc-eQTL 1.28e-02 -0.228 0.0909 0.494 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 5.63e-01 0.0275 0.0475 0.494 CD14_Mono LOneK1K
ENSG00000135525 MAP7 668414 sc-eQTL 3.64e-02 -0.172 0.0817 0.494 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 426756 sc-eQTL 8.74e-01 0.00886 0.0557 0.494 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 7.63e-01 0.0172 0.057 0.494 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 435188 sc-eQTL 6.17e-01 0.0332 0.0663 0.494 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -216 sc-eQTL 3.18e-10 -0.362 0.0548 0.496 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 929382 sc-eQTL 7.85e-01 -0.0148 0.0544 0.496 CD16_Mono LOneK1K
ENSG00000112357 PEX7 396669 sc-eQTL 6.46e-01 -0.0417 0.0908 0.496 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 7.00e-01 0.0217 0.0562 0.496 CD16_Mono LOneK1K
ENSG00000135525 MAP7 668414 sc-eQTL 9.19e-02 0.148 0.0872 0.496 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 426756 sc-eQTL 2.66e-01 -0.0802 0.0719 0.496 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 6.98e-01 -0.0293 0.0754 0.496 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 435188 sc-eQTL 7.13e-01 0.0316 0.0856 0.496 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -216 sc-eQTL 3.06e-05 -0.23 0.0539 0.496 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 929382 sc-eQTL 8.14e-01 -0.00767 0.0326 0.496 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 396669 sc-eQTL 6.45e-01 -0.0437 0.0948 0.496 NK_CD56dim LOneK1K
ENSG00000112378 PERP -888186 sc-eQTL 3.04e-01 0.0605 0.0587 0.496 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -647981 sc-eQTL 8.29e-01 0.0111 0.0512 0.496 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 426756 sc-eQTL 2.02e-01 0.0883 0.069 0.496 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -649000 sc-eQTL 2.69e-01 0.0792 0.0715 0.496 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -216 pQTL 1.92e-25 -0.16 0.015 0.00179 0.00433 0.493
ENSG00000027697 IFNGR1 -216 eQTL 4.72e-117 -0.273 0.0102 0.0 0.427 0.493
ENSG00000135525 MAP7 668414 eQTL 0.00859 0.0622 0.0236 0.00438 0.0 0.493
ENSG00000182747 SLC35D3 296932 eQTL 0.0429 0.0632 0.0311 0.0 0.0 0.493

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -216 0.000415 0.000492 5.98e-05 0.000132 8.98e-05 0.000147 0.000424 7.71e-05 0.000374 0.00018 0.000442 0.000215 0.000528 0.000191 9.17e-05 0.000269 0.000186 0.000282 0.000107 7.37e-05 0.000212 0.000432 0.000351 0.000102 0.000442 0.000149 0.00021 0.000159 0.000357 0.000166 0.000241 2.84e-05 3.15e-05 7.63e-05 8.62e-05 5.71e-05 2.92e-05 3.18e-05 4.81e-05 2.99e-05 1.81e-05 0.000494 5.41e-05 3.67e-06 4.42e-05 5.35e-05 6.05e-05 2.38e-05 2.01e-05
ENSG00000112357 \N 396669 7.7e-06 9.42e-06 4.15e-06 7.6e-06 1.51e-06 4.15e-06 9.59e-06 1.09e-06 6.1e-06 3.54e-06 9.71e-06 4.89e-06 1.18e-05 3.41e-06 3.71e-06 5.06e-06 8.06e-06 8.11e-06 2.34e-06 1.6e-06 5.1e-06 7.85e-06 5.85e-06 3.17e-06 1.31e-05 3.36e-06 3.99e-06 3.38e-06 5.98e-06 7.83e-06 3.95e-06 4.71e-07 7.77e-07 3.31e-06 3.56e-06 2.07e-06 1.08e-06 1.87e-06 9.04e-07 8.19e-07 2.37e-07 6.85e-06 1.61e-06 2.81e-07 6.98e-07 1.73e-06 1.31e-06 5.67e-07 2e-07
ENSG00000135525 MAP7 668414 2.68e-06 3.5e-06 1.31e-06 2.63e-06 4.65e-07 8.1e-07 2.48e-06 3.99e-07 1.95e-06 7.73e-07 2.48e-06 1.39e-06 3.64e-06 1.43e-06 1.41e-06 1.54e-06 1.78e-06 2.46e-06 1.38e-06 1.05e-06 1.93e-06 3.12e-06 2.54e-06 1.15e-06 4.27e-06 1.08e-06 1.34e-06 1.77e-06 1.62e-06 3.32e-06 1.86e-06 3.86e-08 3.35e-07 1.18e-06 1.35e-06 6.79e-07 7.19e-07 4.21e-07 4.85e-07 2.26e-07 1.21e-07 2.11e-06 3.98e-07 1.65e-07 4.11e-07 6.75e-07 8.03e-07 7.69e-08 4.71e-08