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Genes within 1Mb (chr6:137218368:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -1081 sc-eQTL 5.48e-03 -0.194 0.0691 0.427 B L1
ENSG00000029363 BCLAF1 928517 sc-eQTL 5.88e-01 0.017 0.0313 0.427 B L1
ENSG00000112357 PEX7 395804 sc-eQTL 3.19e-01 0.083 0.0832 0.427 B L1
ENSG00000112378 PERP -889051 sc-eQTL 6.30e-01 -0.0266 0.0551 0.427 B L1
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 1.70e-01 0.0608 0.0442 0.427 B L1
ENSG00000197442 MAP3K5 425891 sc-eQTL 3.88e-01 0.0534 0.0618 0.427 B L1
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 6.37e-01 0.033 0.0699 0.427 B L1
ENSG00000027697 IFNGR1 -1081 sc-eQTL 3.12e-06 -0.213 0.0444 0.427 CD4T L1
ENSG00000029363 BCLAF1 928517 sc-eQTL 4.78e-01 0.0251 0.0353 0.427 CD4T L1
ENSG00000112357 PEX7 395804 sc-eQTL 1.59e-01 -0.106 0.0749 0.427 CD4T L1
ENSG00000112378 PERP -889051 sc-eQTL 8.47e-01 0.00975 0.0505 0.427 CD4T L1
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 2.60e-01 0.0534 0.0472 0.427 CD4T L1
ENSG00000197442 MAP3K5 425891 sc-eQTL 2.36e-01 -0.0427 0.036 0.427 CD4T L1
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 2.52e-01 0.0682 0.0594 0.427 CD4T L1
ENSG00000027697 IFNGR1 -1081 sc-eQTL 2.67e-05 -0.218 0.0509 0.427 CD8T L1
ENSG00000029363 BCLAF1 928517 sc-eQTL 3.07e-01 0.0367 0.0358 0.427 CD8T L1
ENSG00000112357 PEX7 395804 sc-eQTL 3.26e-01 0.0869 0.0882 0.427 CD8T L1
ENSG00000112378 PERP -889051 sc-eQTL 4.11e-01 0.0476 0.0577 0.427 CD8T L1
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 5.94e-01 0.0238 0.0446 0.427 CD8T L1
ENSG00000197442 MAP3K5 425891 sc-eQTL 7.66e-01 -0.0141 0.0472 0.427 CD8T L1
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 8.55e-01 -0.012 0.0655 0.427 CD8T L1
ENSG00000027697 IFNGR1 -1081 sc-eQTL 2.23e-02 -0.15 0.0651 0.43 DC L1
ENSG00000029363 BCLAF1 928517 sc-eQTL 1.87e-01 0.0783 0.0591 0.43 DC L1
ENSG00000112357 PEX7 395804 sc-eQTL 7.89e-02 0.163 0.0922 0.43 DC L1
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 2.40e-01 -0.0828 0.0702 0.43 DC L1
ENSG00000135525 MAP7 667549 sc-eQTL 1.69e-01 -0.105 0.076 0.43 DC L1
ENSG00000197442 MAP3K5 425891 sc-eQTL 4.82e-01 -0.0515 0.0731 0.43 DC L1
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 7.66e-01 -0.0214 0.0718 0.43 DC L1
ENSG00000286646 AL121933.2 434323 sc-eQTL 2.29e-01 0.115 0.0951 0.43 DC L1
ENSG00000027697 IFNGR1 -1081 sc-eQTL 7.42e-15 -0.393 0.0468 0.427 Mono L1
ENSG00000029363 BCLAF1 928517 sc-eQTL 6.16e-01 -0.0232 0.0462 0.427 Mono L1
ENSG00000112357 PEX7 395804 sc-eQTL 6.94e-02 -0.165 0.0903 0.427 Mono L1
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 7.04e-01 -0.0174 0.0459 0.427 Mono L1
ENSG00000135525 MAP7 667549 sc-eQTL 2.70e-01 -0.0886 0.0801 0.427 Mono L1
ENSG00000197442 MAP3K5 425891 sc-eQTL 8.07e-01 0.0131 0.0535 0.427 Mono L1
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 7.63e-01 -0.0172 0.0568 0.427 Mono L1
ENSG00000286646 AL121933.2 434323 sc-eQTL 8.17e-01 0.015 0.0648 0.427 Mono L1
ENSG00000027697 IFNGR1 -1081 sc-eQTL 2.20e-05 -0.247 0.0569 0.427 NK L1
ENSG00000029363 BCLAF1 928517 sc-eQTL 4.90e-01 -0.0218 0.0315 0.427 NK L1
ENSG00000112357 PEX7 395804 sc-eQTL 4.62e-01 0.0675 0.0915 0.427 NK L1
ENSG00000112378 PERP -889051 sc-eQTL 9.51e-01 0.00354 0.0577 0.427 NK L1
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 6.06e-01 0.0255 0.0494 0.427 NK L1
ENSG00000197442 MAP3K5 425891 sc-eQTL 7.97e-01 0.0182 0.0708 0.427 NK L1
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 1.61e-01 0.0981 0.0697 0.427 NK L1
ENSG00000027697 IFNGR1 -1081 sc-eQTL 2.83e-02 -0.123 0.0559 0.427 Other_T L1
ENSG00000029363 BCLAF1 928517 sc-eQTL 6.75e-01 -0.0199 0.0474 0.427 Other_T L1
ENSG00000112357 PEX7 395804 sc-eQTL 9.72e-01 0.00324 0.0921 0.427 Other_T L1
ENSG00000112378 PERP -889051 sc-eQTL 2.15e-01 -0.0916 0.0737 0.427 Other_T L1
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 8.40e-01 0.00711 0.0352 0.427 Other_T L1
ENSG00000146410 MTFR2 968033 sc-eQTL 3.72e-01 -0.0475 0.0532 0.427 Other_T L1
ENSG00000197442 MAP3K5 425891 sc-eQTL 6.39e-01 0.0319 0.0679 0.427 Other_T L1
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 8.17e-01 0.0162 0.0698 0.427 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -1081 sc-eQTL 4.50e-02 -0.18 0.0894 0.423 B_Activated L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 1.30e-01 -0.111 0.0729 0.423 B_Activated L2
ENSG00000112357 PEX7 395804 sc-eQTL 9.79e-01 -0.00232 0.089 0.423 B_Activated L2
ENSG00000112378 PERP -889051 sc-eQTL 9.60e-01 -0.00233 0.046 0.423 B_Activated L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 1.10e-01 0.142 0.0886 0.423 B_Activated L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 1.86e-01 0.132 0.0995 0.423 B_Activated L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 1.68e-01 0.107 0.0776 0.423 B_Activated L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 4.43e-03 -0.235 0.0818 0.425 B_Intermediate L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 6.42e-01 0.0221 0.0474 0.425 B_Intermediate L2
ENSG00000112357 PEX7 395804 sc-eQTL 1.02e-01 0.143 0.0868 0.425 B_Intermediate L2
ENSG00000112378 PERP -889051 sc-eQTL 8.96e-02 -0.135 0.079 0.425 B_Intermediate L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 3.20e-01 0.0621 0.0623 0.425 B_Intermediate L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 7.27e-01 0.0264 0.0755 0.425 B_Intermediate L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 2.31e-01 0.106 0.0883 0.425 B_Intermediate L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 2.72e-03 -0.269 0.0887 0.425 B_Memory L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 2.83e-01 -0.0578 0.0537 0.425 B_Memory L2
ENSG00000112357 PEX7 395804 sc-eQTL 3.78e-01 0.0807 0.0914 0.425 B_Memory L2
ENSG00000112378 PERP -889051 sc-eQTL 6.82e-01 0.0353 0.0861 0.425 B_Memory L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 2.58e-01 0.067 0.0591 0.425 B_Memory L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 5.44e-01 0.0491 0.0809 0.425 B_Memory L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 8.20e-01 0.0201 0.0882 0.425 B_Memory L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 9.66e-03 -0.183 0.0699 0.427 B_Naive1 L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 8.24e-01 0.00906 0.0406 0.427 B_Naive1 L2
ENSG00000112357 PEX7 395804 sc-eQTL 4.81e-01 -0.0661 0.0936 0.427 B_Naive1 L2
ENSG00000112378 PERP -889051 sc-eQTL 8.88e-01 -0.0115 0.082 0.427 B_Naive1 L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 1.76e-01 0.0643 0.0473 0.427 B_Naive1 L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 1.00e-01 0.11 0.0664 0.427 B_Naive1 L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 2.94e-01 0.0781 0.0743 0.427 B_Naive1 L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 8.15e-01 -0.0203 0.0869 0.427 B_Naive2 L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 6.24e-01 0.0248 0.0504 0.427 B_Naive2 L2
ENSG00000112357 PEX7 395804 sc-eQTL 1.11e-01 0.151 0.0945 0.427 B_Naive2 L2
ENSG00000112378 PERP -889051 sc-eQTL 4.92e-01 -0.0476 0.0692 0.427 B_Naive2 L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 8.19e-01 0.0159 0.0692 0.427 B_Naive2 L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 7.56e-01 -0.023 0.0737 0.427 B_Naive2 L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 5.75e-01 -0.0503 0.0894 0.427 B_Naive2 L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 3.34e-03 -0.241 0.081 0.425 CD4_CTL L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 2.55e-01 0.0836 0.0732 0.425 CD4_CTL L2
ENSG00000112357 PEX7 395804 sc-eQTL 2.29e-01 -0.11 0.0914 0.425 CD4_CTL L2
ENSG00000112378 PERP -889051 sc-eQTL 3.98e-01 -0.0786 0.0929 0.425 CD4_CTL L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 8.95e-02 0.0919 0.0539 0.425 CD4_CTL L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 9.88e-01 -0.00134 0.0866 0.425 CD4_CTL L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 8.49e-01 -0.0161 0.0844 0.425 CD4_CTL L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 1.32e-04 -0.168 0.0431 0.427 CD4_Naive L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 8.99e-01 0.00455 0.0358 0.427 CD4_Naive L2
ENSG00000112357 PEX7 395804 sc-eQTL 3.23e-01 -0.0832 0.084 0.427 CD4_Naive L2
ENSG00000112378 PERP -889051 sc-eQTL 7.97e-01 0.0179 0.0695 0.427 CD4_Naive L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 4.86e-01 0.034 0.0487 0.427 CD4_Naive L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 5.93e-01 -0.0192 0.0358 0.427 CD4_Naive L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 1.45e-01 0.092 0.0628 0.427 CD4_Naive L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 4.01e-02 -0.126 0.0611 0.427 CD4_TCM L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 4.77e-01 0.0277 0.0389 0.427 CD4_TCM L2
ENSG00000112357 PEX7 395804 sc-eQTL 3.49e-01 -0.085 0.0904 0.427 CD4_TCM L2
ENSG00000112378 PERP -889051 sc-eQTL 6.69e-01 0.0327 0.0766 0.427 CD4_TCM L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 3.39e-01 0.0425 0.0444 0.427 CD4_TCM L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 6.16e-02 -0.0944 0.0502 0.427 CD4_TCM L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 8.93e-01 -0.00839 0.0623 0.427 CD4_TCM L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 2.17e-04 -0.257 0.0682 0.427 CD4_TEM L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 4.83e-01 0.0351 0.0499 0.427 CD4_TEM L2
ENSG00000112357 PEX7 395804 sc-eQTL 7.86e-01 0.0247 0.0909 0.427 CD4_TEM L2
ENSG00000112378 PERP -889051 sc-eQTL 7.17e-01 -0.0267 0.0737 0.427 CD4_TEM L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 3.88e-01 0.0404 0.0467 0.427 CD4_TEM L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 6.83e-01 -0.0295 0.0722 0.427 CD4_TEM L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 6.42e-01 -0.0349 0.075 0.427 CD4_TEM L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 2.02e-03 -0.195 0.0625 0.427 CD8_CTL L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 2.71e-01 0.0468 0.0425 0.427 CD8_CTL L2
ENSG00000112357 PEX7 395804 sc-eQTL 8.71e-02 0.15 0.0873 0.427 CD8_CTL L2
ENSG00000112378 PERP -889051 sc-eQTL 3.56e-01 0.0781 0.0843 0.427 CD8_CTL L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 7.41e-01 0.0178 0.0537 0.427 CD8_CTL L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 8.83e-01 0.0112 0.0759 0.427 CD8_CTL L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 7.74e-01 -0.0217 0.0756 0.427 CD8_CTL L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 1.48e-05 -0.269 0.0606 0.427 CD8_Naive L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 4.95e-01 -0.0302 0.0442 0.427 CD8_Naive L2
ENSG00000112357 PEX7 395804 sc-eQTL 9.80e-01 -0.00235 0.0918 0.427 CD8_Naive L2
ENSG00000112378 PERP -889051 sc-eQTL 4.30e-01 -0.0551 0.0697 0.427 CD8_Naive L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 5.68e-01 0.0284 0.0495 0.427 CD8_Naive L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 5.25e-01 0.0374 0.0587 0.427 CD8_Naive L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 5.74e-01 -0.0412 0.0732 0.427 CD8_Naive L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 6.51e-02 -0.156 0.0843 0.428 CD8_TCM L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 2.05e-01 0.0807 0.0635 0.428 CD8_TCM L2
ENSG00000112357 PEX7 395804 sc-eQTL 1.47e-01 -0.141 0.097 0.428 CD8_TCM L2
ENSG00000112378 PERP -889051 sc-eQTL 1.17e-01 0.15 0.095 0.428 CD8_TCM L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 3.27e-01 0.0452 0.046 0.428 CD8_TCM L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 8.42e-01 0.0164 0.0823 0.428 CD8_TCM L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 8.94e-01 -0.0112 0.0843 0.428 CD8_TCM L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 1.32e-02 -0.202 0.0809 0.429 CD8_TEM L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 1.72e-01 0.106 0.0772 0.429 CD8_TEM L2
ENSG00000112357 PEX7 395804 sc-eQTL 9.99e-01 9.8e-05 0.0946 0.429 CD8_TEM L2
ENSG00000112378 PERP -889051 sc-eQTL 9.47e-02 -0.164 0.0977 0.429 CD8_TEM L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 1.00e+00 7.9e-06 0.0606 0.429 CD8_TEM L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 4.05e-01 0.0781 0.0936 0.429 CD8_TEM L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 2.10e-01 0.113 0.0896 0.429 CD8_TEM L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 1.65e-02 -0.155 0.0639 0.431 MAIT L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 4.57e-01 -0.0401 0.0538 0.431 MAIT L2
ENSG00000112357 PEX7 395804 sc-eQTL 8.41e-01 -0.0177 0.0879 0.431 MAIT L2
ENSG00000112378 PERP -889051 sc-eQTL 2.56e-01 -0.104 0.0914 0.431 MAIT L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 8.19e-01 0.01 0.0436 0.431 MAIT L2
ENSG00000146410 MTFR2 968033 sc-eQTL 4.66e-01 0.053 0.0726 0.431 MAIT L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 3.42e-01 0.0722 0.0758 0.431 MAIT L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 4.53e-01 0.0606 0.0805 0.431 MAIT L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 2.37e-02 -0.158 0.0693 0.431 NK_CD56bright L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 6.38e-01 0.0244 0.0517 0.431 NK_CD56bright L2
ENSG00000112357 PEX7 395804 sc-eQTL 1.74e-01 0.124 0.091 0.431 NK_CD56bright L2
ENSG00000112378 PERP -889051 sc-eQTL 2.77e-01 -0.089 0.0817 0.431 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 6.42e-01 0.0243 0.0522 0.431 NK_CD56bright L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 9.64e-01 0.00361 0.0795 0.431 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 7.38e-02 0.149 0.0826 0.431 NK_CD56bright L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 1.72e-06 -0.255 0.0518 0.429 NK_CD56dim L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 1.87e-01 -0.0471 0.0356 0.429 NK_CD56dim L2
ENSG00000112357 PEX7 395804 sc-eQTL 8.85e-01 -0.0136 0.0943 0.429 NK_CD56dim L2
ENSG00000112378 PERP -889051 sc-eQTL 9.41e-01 -0.00493 0.0663 0.429 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 8.27e-01 0.0113 0.0515 0.429 NK_CD56dim L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 8.28e-01 -0.0162 0.0742 0.429 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 8.37e-01 -0.016 0.0772 0.429 NK_CD56dim L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 3.76e-04 -0.246 0.0678 0.436 NK_HLA L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 9.01e-01 -0.00741 0.0593 0.436 NK_HLA L2
ENSG00000112357 PEX7 395804 sc-eQTL 4.75e-01 -0.0636 0.0889 0.436 NK_HLA L2
ENSG00000112378 PERP -889051 sc-eQTL 5.68e-01 -0.0412 0.0721 0.436 NK_HLA L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 4.41e-01 -0.0428 0.0554 0.436 NK_HLA L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 2.43e-01 0.103 0.0879 0.436 NK_HLA L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 6.23e-01 0.0441 0.0894 0.436 NK_HLA L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 5.04e-06 -0.259 0.0552 0.429 NK_cytokine L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 3.64e-01 -0.0393 0.0432 0.429 NK_cytokine L2
ENSG00000112357 PEX7 395804 sc-eQTL 4.29e-01 0.0721 0.0909 0.429 NK_cytokine L2
ENSG00000112378 PERP -889051 sc-eQTL 7.37e-01 0.0232 0.0691 0.429 NK_cytokine L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 7.59e-01 0.0159 0.0518 0.429 NK_cytokine L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 2.52e-01 0.0816 0.0709 0.429 NK_cytokine L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 7.00e-02 0.141 0.0775 0.429 NK_cytokine L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 5.27e-01 -0.0705 0.111 0.426 PB L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 7.78e-01 0.0271 0.096 0.426 PB L2
ENSG00000112357 PEX7 395804 sc-eQTL 6.83e-01 -0.0468 0.114 0.426 PB L2
ENSG00000112378 PERP -889051 sc-eQTL 3.39e-01 -0.0683 0.071 0.426 PB L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 7.74e-01 -0.0249 0.0865 0.426 PB L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 2.69e-01 -0.109 0.0979 0.426 PB L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 1.71e-01 -0.142 0.103 0.426 PB L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 9.91e-01 -0.00079 0.0726 0.43 Pro_T L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 6.10e-01 0.0384 0.0752 0.43 Pro_T L2
ENSG00000112357 PEX7 395804 sc-eQTL 6.45e-01 -0.0407 0.0881 0.43 Pro_T L2
ENSG00000112378 PERP -889051 sc-eQTL 4.09e-01 0.0579 0.07 0.43 Pro_T L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 1.28e-01 0.0671 0.044 0.43 Pro_T L2
ENSG00000146410 MTFR2 968033 sc-eQTL 5.32e-01 -0.0384 0.0613 0.43 Pro_T L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 2.04e-02 0.198 0.0845 0.43 Pro_T L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 5.21e-01 -0.0552 0.0858 0.43 Pro_T L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 1.51e-02 -0.203 0.0827 0.427 Treg L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 6.21e-01 0.0268 0.0542 0.427 Treg L2
ENSG00000112357 PEX7 395804 sc-eQTL 1.22e-02 -0.221 0.0873 0.427 Treg L2
ENSG00000112378 PERP -889051 sc-eQTL 2.97e-01 -0.0999 0.0956 0.427 Treg L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 8.31e-01 -0.0114 0.0533 0.427 Treg L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 8.85e-01 -0.00837 0.0578 0.427 Treg L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 7.90e-01 0.0216 0.0813 0.427 Treg L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 4.13e-03 -0.211 0.0726 0.424 cDC L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 5.82e-01 -0.0413 0.0748 0.424 cDC L2
ENSG00000112357 PEX7 395804 sc-eQTL 9.20e-02 0.161 0.0953 0.424 cDC L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 8.01e-01 0.0185 0.0732 0.424 cDC L2
ENSG00000135525 MAP7 667549 sc-eQTL 1.45e-01 -0.124 0.0851 0.424 cDC L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 8.76e-01 0.0118 0.0753 0.424 cDC L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 2.43e-01 -0.111 0.095 0.424 cDC L2
ENSG00000286646 AL121933.2 434323 sc-eQTL 5.25e-02 0.189 0.0971 0.424 cDC L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 3.19e-15 -0.373 0.0439 0.427 cMono_IL1B L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 6.92e-01 -0.0216 0.0545 0.427 cMono_IL1B L2
ENSG00000112357 PEX7 395804 sc-eQTL 2.61e-02 -0.202 0.0904 0.427 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 9.12e-01 0.00607 0.0547 0.427 cMono_IL1B L2
ENSG00000135525 MAP7 667549 sc-eQTL 9.22e-01 -0.00767 0.0788 0.427 cMono_IL1B L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 3.93e-01 -0.0486 0.0568 0.427 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 5.89e-01 0.0316 0.0584 0.427 cMono_IL1B L2
ENSG00000286646 AL121933.2 434323 sc-eQTL 9.61e-01 -0.00354 0.0732 0.427 cMono_IL1B L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 1.93e-06 -0.274 0.056 0.427 cMono_S100A L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 1.15e-01 -0.0957 0.0604 0.427 cMono_S100A L2
ENSG00000112357 PEX7 395804 sc-eQTL 5.90e-01 -0.0511 0.0948 0.427 cMono_S100A L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 9.47e-01 0.00349 0.0525 0.427 cMono_S100A L2
ENSG00000135525 MAP7 667549 sc-eQTL 1.68e-01 -0.122 0.0881 0.427 cMono_S100A L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 8.86e-02 0.121 0.0709 0.427 cMono_S100A L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 9.59e-01 -0.00386 0.0754 0.427 cMono_S100A L2
ENSG00000286646 AL121933.2 434323 sc-eQTL 3.06e-01 0.0754 0.0735 0.427 cMono_S100A L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 1.35e-02 -0.22 0.0878 0.439 gdT L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 5.89e-01 -0.0427 0.0789 0.439 gdT L2
ENSG00000112357 PEX7 395804 sc-eQTL 5.25e-01 -0.0724 0.114 0.439 gdT L2
ENSG00000112378 PERP -889051 sc-eQTL 1.04e-03 -0.32 0.0956 0.439 gdT L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 9.32e-01 0.00471 0.0552 0.439 gdT L2
ENSG00000146410 MTFR2 968033 sc-eQTL 7.53e-02 -0.154 0.0861 0.439 gdT L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 6.81e-01 0.048 0.117 0.439 gdT L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 7.67e-01 0.0297 0.1 0.439 gdT L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 1.43e-04 -0.237 0.0611 0.429 intMono L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 6.58e-01 -0.0371 0.0836 0.429 intMono L2
ENSG00000112357 PEX7 395804 sc-eQTL 7.58e-01 -0.0263 0.0854 0.429 intMono L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 6.52e-01 0.0247 0.0547 0.429 intMono L2
ENSG00000135525 MAP7 667549 sc-eQTL 5.36e-02 0.162 0.0833 0.429 intMono L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 5.44e-01 0.054 0.0889 0.429 intMono L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 8.66e-01 0.0138 0.0815 0.429 intMono L2
ENSG00000286646 AL121933.2 434323 sc-eQTL 7.67e-01 -0.0279 0.094 0.429 intMono L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 4.05e-09 -0.405 0.0659 0.432 ncMono L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 6.62e-01 -0.0244 0.0558 0.432 ncMono L2
ENSG00000112357 PEX7 395804 sc-eQTL 7.11e-01 -0.0331 0.089 0.432 ncMono L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 3.71e-01 -0.0569 0.0635 0.432 ncMono L2
ENSG00000135525 MAP7 667549 sc-eQTL 8.55e-01 0.0144 0.0786 0.432 ncMono L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 8.92e-01 -0.0112 0.0826 0.432 ncMono L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 3.34e-02 -0.168 0.0786 0.432 ncMono L2
ENSG00000286646 AL121933.2 434323 sc-eQTL 1.72e-01 0.114 0.0835 0.432 ncMono L2
ENSG00000027697 IFNGR1 -1081 sc-eQTL 8.68e-01 -0.0143 0.0859 0.421 pDC L2
ENSG00000029363 BCLAF1 928517 sc-eQTL 7.07e-04 0.215 0.0621 0.421 pDC L2
ENSG00000112357 PEX7 395804 sc-eQTL 7.40e-01 0.0314 0.0946 0.421 pDC L2
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 6.04e-01 -0.0414 0.0796 0.421 pDC L2
ENSG00000135525 MAP7 667549 sc-eQTL 6.13e-01 -0.0335 0.066 0.421 pDC L2
ENSG00000197442 MAP3K5 425891 sc-eQTL 1.55e-01 -0.15 0.105 0.421 pDC L2
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 6.90e-01 0.0323 0.0808 0.421 pDC L2
ENSG00000286646 AL121933.2 434323 sc-eQTL 4.28e-01 -0.0773 0.0973 0.421 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -1081 sc-eQTL 1.73e-05 -0.311 0.0706 0.427 B_Memory LOneK1K
ENSG00000029363 BCLAF1 928517 sc-eQTL 5.31e-01 -0.026 0.0414 0.427 B_Memory LOneK1K
ENSG00000112357 PEX7 395804 sc-eQTL 1.01e-01 0.139 0.0843 0.427 B_Memory LOneK1K
ENSG00000112378 PERP -889051 sc-eQTL 7.49e-01 -0.0253 0.0788 0.427 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 2.24e-01 0.0632 0.0519 0.427 B_Memory LOneK1K
ENSG00000197442 MAP3K5 425891 sc-eQTL 2.51e-01 0.0791 0.0687 0.427 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 1.05e-01 0.142 0.0875 0.427 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -1081 sc-eQTL 8.98e-02 -0.128 0.075 0.427 B_Naive LOneK1K
ENSG00000029363 BCLAF1 928517 sc-eQTL 7.05e-01 0.0132 0.0347 0.427 B_Naive LOneK1K
ENSG00000112357 PEX7 395804 sc-eQTL 7.99e-01 0.0235 0.0919 0.427 B_Naive LOneK1K
ENSG00000112378 PERP -889051 sc-eQTL 4.86e-01 -0.0573 0.0822 0.427 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 5.75e-01 0.0243 0.0432 0.427 B_Naive LOneK1K
ENSG00000197442 MAP3K5 425891 sc-eQTL 6.18e-01 0.0316 0.0634 0.427 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 7.46e-01 0.025 0.077 0.427 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -1081 sc-eQTL 4.81e-15 -0.372 0.044 0.427 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 928517 sc-eQTL 4.56e-01 -0.0354 0.0474 0.427 CD14_Mono LOneK1K
ENSG00000112357 PEX7 395804 sc-eQTL 5.52e-02 -0.175 0.0906 0.427 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 7.60e-01 0.0144 0.0471 0.427 CD14_Mono LOneK1K
ENSG00000135525 MAP7 667549 sc-eQTL 9.74e-02 -0.135 0.0812 0.427 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 425891 sc-eQTL 9.86e-01 -0.000995 0.0552 0.427 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 8.35e-01 0.0118 0.0565 0.427 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 434323 sc-eQTL 6.57e-01 0.0292 0.0657 0.427 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -1081 sc-eQTL 1.85e-09 -0.346 0.055 0.429 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 928517 sc-eQTL 6.35e-01 -0.0258 0.0542 0.429 CD16_Mono LOneK1K
ENSG00000112357 PEX7 395804 sc-eQTL 9.43e-01 -0.00647 0.0905 0.429 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 7.57e-01 -0.0173 0.056 0.429 CD16_Mono LOneK1K
ENSG00000135525 MAP7 667549 sc-eQTL 1.72e-01 0.119 0.0871 0.429 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 425891 sc-eQTL 9.33e-01 -0.00607 0.0718 0.429 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 3.28e-01 -0.0734 0.0749 0.429 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 434323 sc-eQTL 2.21e-01 0.104 0.0849 0.429 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -1081 sc-eQTL 1.90e-06 -0.26 0.053 0.429 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 928517 sc-eQTL 4.60e-01 -0.024 0.0324 0.429 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 395804 sc-eQTL 7.33e-01 0.0322 0.0944 0.429 NK_CD56dim LOneK1K
ENSG00000112378 PERP -889051 sc-eQTL 6.06e-01 0.0302 0.0585 0.429 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -648846 sc-eQTL 7.68e-01 0.0151 0.051 0.429 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 425891 sc-eQTL 6.82e-01 0.0283 0.0689 0.429 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -649865 sc-eQTL 1.98e-01 0.0917 0.0711 0.429 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -1081 pQTL 1.52e-29 -0.175 0.0151 0.827 0.834 0.448
ENSG00000027697 IFNGR1 -1081 eQTL 2.07e-127 -0.28 0.00995 0.00137 0.207 0.45
ENSG00000135525 MAP7 667549 eQTL 0.00148 0.0748 0.0235 0.013 0.00294 0.45

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -1081 0.000222 0.000182 2.4e-05 6.58e-05 2.68e-05 8.29e-05 0.000189 2.13e-05 0.000155 7.45e-05 0.00021 7.81e-05 0.000239 6.61e-05 2.72e-05 0.000126 8.02e-05 0.000141 3.91e-05 3e-05 8.45e-05 0.000188 0.000184 4.75e-05 0.000213 4.6e-05 8.85e-05 5.58e-05 0.000159 9.18e-05 9.17e-05 5.49e-06 1.13e-05 2.63e-05 3.48e-05 2e-05 9.6e-06 9.43e-06 1.77e-05 8.39e-06 3.45e-06 0.000235 2.79e-05 5.78e-07 1.39e-05 1.55e-05 1.82e-05 5.91e-06 7.44e-06
ENSG00000112357 \N 395804 1.2e-05 2.42e-06 4.62e-07 1.18e-06 3.69e-07 1.54e-06 1.31e-06 4.04e-07 1.72e-06 6.44e-07 1.84e-06 8.48e-07 2.61e-06 9.31e-07 9.2e-07 2.27e-06 1.07e-06 2.3e-06 5.56e-07 4.58e-07 8.18e-07 3.12e-06 1.86e-06 6.91e-07 2.46e-06 3.87e-07 1.22e-06 9.6e-07 1.71e-06 1.47e-06 8.11e-07 4.03e-08 2.19e-07 6.84e-07 7.08e-07 5.15e-07 7.24e-07 1.27e-07 3.76e-07 2.99e-07 1.16e-07 3.4e-06 1.57e-06 1.58e-08 1.54e-07 2.13e-07 2.27e-07 8.41e-08 1.09e-07
ENSG00000135525 MAP7 667549 4.35e-06 8.33e-07 3.03e-07 3.71e-07 1.13e-07 6.58e-07 7.96e-07 8.86e-08 6.53e-07 2.16e-07 1.07e-06 2.98e-07 8.6e-07 1.84e-07 4.39e-07 8.28e-07 2.53e-07 5.48e-07 3.79e-07 1.69e-07 1.87e-07 9.64e-07 5.77e-07 2.29e-07 9.15e-07 1.76e-07 4.9e-07 2.68e-07 3.83e-07 7.92e-07 3.1e-07 3.08e-08 4.34e-08 3.51e-07 3.26e-07 7.86e-08 1e-07 8.63e-08 5.7e-08 8.09e-08 5.34e-08 1.09e-06 4.64e-07 1.88e-08 3.71e-08 1.78e-08 7.66e-08 1.88e-09 4.94e-08