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Genes within 1Mb (chr6:137209894:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -9555 sc-eQTL 4.73e-03 -0.197 0.0691 0.421 B L1
ENSG00000029363 BCLAF1 920043 sc-eQTL 5.52e-01 0.0187 0.0313 0.421 B L1
ENSG00000112357 PEX7 387330 sc-eQTL 2.66e-01 0.0926 0.0831 0.421 B L1
ENSG00000112378 PERP -897525 sc-eQTL 5.75e-01 -0.0309 0.0551 0.421 B L1
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 1.48e-01 0.0642 0.0442 0.421 B L1
ENSG00000197442 MAP3K5 417417 sc-eQTL 3.30e-01 0.0603 0.0618 0.421 B L1
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 6.19e-01 0.0348 0.0699 0.421 B L1
ENSG00000027697 IFNGR1 -9555 sc-eQTL 4.82e-06 -0.208 0.0444 0.421 CD4T L1
ENSG00000029363 BCLAF1 920043 sc-eQTL 4.74e-01 0.0253 0.0353 0.421 CD4T L1
ENSG00000112357 PEX7 387330 sc-eQTL 1.49e-01 -0.108 0.0748 0.421 CD4T L1
ENSG00000112378 PERP -897525 sc-eQTL 9.56e-01 -0.00278 0.0505 0.421 CD4T L1
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 2.33e-01 0.0564 0.0471 0.421 CD4T L1
ENSG00000197442 MAP3K5 417417 sc-eQTL 3.22e-01 -0.0357 0.0359 0.421 CD4T L1
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 2.35e-01 0.0706 0.0593 0.421 CD4T L1
ENSG00000027697 IFNGR1 -9555 sc-eQTL 5.28e-05 -0.21 0.0509 0.421 CD8T L1
ENSG00000029363 BCLAF1 920043 sc-eQTL 3.26e-01 0.0352 0.0357 0.421 CD8T L1
ENSG00000112357 PEX7 387330 sc-eQTL 3.31e-01 0.0857 0.0881 0.421 CD8T L1
ENSG00000112378 PERP -897525 sc-eQTL 3.47e-01 0.0543 0.0576 0.421 CD8T L1
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 6.10e-01 0.0228 0.0445 0.421 CD8T L1
ENSG00000197442 MAP3K5 417417 sc-eQTL 9.87e-01 -0.000797 0.0471 0.421 CD8T L1
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 8.51e-01 -0.0123 0.0654 0.421 CD8T L1
ENSG00000027697 IFNGR1 -9555 sc-eQTL 2.12e-02 -0.151 0.0649 0.426 DC L1
ENSG00000029363 BCLAF1 920043 sc-eQTL 1.89e-01 0.0778 0.059 0.426 DC L1
ENSG00000112357 PEX7 387330 sc-eQTL 8.79e-02 0.158 0.092 0.426 DC L1
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 2.85e-01 -0.0752 0.0701 0.426 DC L1
ENSG00000135525 MAP7 659075 sc-eQTL 2.15e-01 -0.0944 0.0759 0.426 DC L1
ENSG00000197442 MAP3K5 417417 sc-eQTL 4.63e-01 -0.0537 0.0729 0.426 DC L1
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 8.27e-01 -0.0157 0.0717 0.426 DC L1
ENSG00000286646 AL121933.2 425849 sc-eQTL 2.74e-01 0.104 0.095 0.426 DC L1
ENSG00000027697 IFNGR1 -9555 sc-eQTL 6.49e-15 -0.393 0.0468 0.421 Mono L1
ENSG00000029363 BCLAF1 920043 sc-eQTL 8.66e-01 -0.0078 0.0462 0.421 Mono L1
ENSG00000112357 PEX7 387330 sc-eQTL 6.97e-02 -0.165 0.0903 0.421 Mono L1
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 6.86e-01 -0.0186 0.0459 0.421 Mono L1
ENSG00000135525 MAP7 659075 sc-eQTL 3.16e-01 -0.0806 0.0801 0.421 Mono L1
ENSG00000197442 MAP3K5 417417 sc-eQTL 9.91e-01 -0.000627 0.0535 0.421 Mono L1
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 5.70e-01 -0.0323 0.0568 0.421 Mono L1
ENSG00000286646 AL121933.2 425849 sc-eQTL 8.91e-01 -0.00886 0.0648 0.421 Mono L1
ENSG00000027697 IFNGR1 -9555 sc-eQTL 6.21e-05 -0.233 0.057 0.421 NK L1
ENSG00000029363 BCLAF1 920043 sc-eQTL 4.14e-01 -0.0257 0.0314 0.421 NK L1
ENSG00000112357 PEX7 387330 sc-eQTL 6.77e-01 0.0381 0.0914 0.421 NK L1
ENSG00000112378 PERP -897525 sc-eQTL 9.33e-01 0.00486 0.0576 0.421 NK L1
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 6.50e-01 0.0224 0.0493 0.421 NK L1
ENSG00000197442 MAP3K5 417417 sc-eQTL 5.85e-01 0.0386 0.0706 0.421 NK L1
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 2.22e-01 0.0853 0.0696 0.421 NK L1
ENSG00000027697 IFNGR1 -9555 sc-eQTL 3.20e-02 -0.121 0.0559 0.421 Other_T L1
ENSG00000029363 BCLAF1 920043 sc-eQTL 6.79e-01 -0.0197 0.0474 0.421 Other_T L1
ENSG00000112357 PEX7 387330 sc-eQTL 9.90e-01 0.00111 0.0922 0.421 Other_T L1
ENSG00000112378 PERP -897525 sc-eQTL 2.69e-01 -0.0818 0.0738 0.421 Other_T L1
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 9.94e-01 -0.000281 0.0352 0.421 Other_T L1
ENSG00000146410 MTFR2 959559 sc-eQTL 4.56e-01 -0.0397 0.0532 0.421 Other_T L1
ENSG00000197442 MAP3K5 417417 sc-eQTL 6.41e-01 0.0317 0.0679 0.421 Other_T L1
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 8.37e-01 0.0144 0.0698 0.421 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -9555 sc-eQTL 3.08e-02 -0.195 0.0894 0.416 B_Activated L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 1.69e-01 -0.101 0.0732 0.416 B_Activated L2
ENSG00000112357 PEX7 387330 sc-eQTL 9.71e-01 0.00326 0.0892 0.416 B_Activated L2
ENSG00000112378 PERP -897525 sc-eQTL 9.30e-01 0.00409 0.0462 0.416 B_Activated L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 9.36e-02 0.15 0.0888 0.416 B_Activated L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 1.89e-01 0.131 0.0997 0.416 B_Activated L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 1.61e-01 0.109 0.0777 0.416 B_Activated L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 5.99e-03 -0.226 0.0816 0.418 B_Intermediate L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 7.32e-01 0.0162 0.0472 0.418 B_Intermediate L2
ENSG00000112357 PEX7 387330 sc-eQTL 1.06e-01 0.14 0.0864 0.418 B_Intermediate L2
ENSG00000112378 PERP -897525 sc-eQTL 1.06e-01 -0.128 0.0787 0.418 B_Intermediate L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 3.76e-01 0.055 0.062 0.418 B_Intermediate L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 7.96e-01 0.0194 0.0751 0.418 B_Intermediate L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 2.62e-01 0.0988 0.0879 0.418 B_Intermediate L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 2.28e-03 -0.272 0.0881 0.42 B_Memory L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 3.50e-01 -0.05 0.0534 0.42 B_Memory L2
ENSG00000112357 PEX7 387330 sc-eQTL 4.20e-01 0.0734 0.0909 0.42 B_Memory L2
ENSG00000112378 PERP -897525 sc-eQTL 6.16e-01 0.043 0.0856 0.42 B_Memory L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 2.84e-01 0.0631 0.0588 0.42 B_Memory L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 5.87e-01 0.0438 0.0804 0.42 B_Memory L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 8.63e-01 0.0151 0.0877 0.42 B_Memory L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 8.55e-03 -0.185 0.0698 0.421 B_Naive1 L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 8.49e-01 0.00771 0.0405 0.421 B_Naive1 L2
ENSG00000112357 PEX7 387330 sc-eQTL 6.61e-01 -0.0411 0.0936 0.421 B_Naive1 L2
ENSG00000112378 PERP -897525 sc-eQTL 8.16e-01 -0.019 0.0818 0.421 B_Naive1 L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 1.32e-01 0.0715 0.0472 0.421 B_Naive1 L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 7.82e-02 0.117 0.0662 0.421 B_Naive1 L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 2.96e-01 0.0778 0.0742 0.421 B_Naive1 L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 9.09e-01 -0.00995 0.0868 0.421 B_Naive2 L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 5.70e-01 0.0286 0.0503 0.421 B_Naive2 L2
ENSG00000112357 PEX7 387330 sc-eQTL 1.70e-01 0.13 0.0945 0.421 B_Naive2 L2
ENSG00000112378 PERP -897525 sc-eQTL 5.11e-01 -0.0455 0.0691 0.421 B_Naive2 L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 5.46e-01 0.0418 0.0691 0.421 B_Naive2 L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 6.58e-01 -0.0326 0.0735 0.421 B_Naive2 L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 6.27e-01 -0.0435 0.0893 0.421 B_Naive2 L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 9.22e-03 -0.214 0.0815 0.418 CD4_CTL L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 2.31e-01 0.088 0.0733 0.418 CD4_CTL L2
ENSG00000112357 PEX7 387330 sc-eQTL 1.91e-01 -0.12 0.0915 0.418 CD4_CTL L2
ENSG00000112378 PERP -897525 sc-eQTL 4.01e-01 -0.0783 0.093 0.418 CD4_CTL L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 7.30e-02 0.0972 0.0539 0.418 CD4_CTL L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 8.79e-01 0.0132 0.0867 0.418 CD4_CTL L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 8.63e-01 -0.0146 0.0846 0.418 CD4_CTL L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 1.73e-04 -0.164 0.043 0.421 CD4_Naive L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 9.36e-01 0.00288 0.0357 0.421 CD4_Naive L2
ENSG00000112357 PEX7 387330 sc-eQTL 3.55e-01 -0.0776 0.0837 0.421 CD4_Naive L2
ENSG00000112378 PERP -897525 sc-eQTL 8.31e-01 -0.0148 0.0692 0.421 CD4_Naive L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 4.20e-01 0.0392 0.0485 0.421 CD4_Naive L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 7.09e-01 -0.0133 0.0357 0.421 CD4_Naive L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 1.40e-01 0.0926 0.0626 0.421 CD4_Naive L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 5.47e-02 -0.118 0.0611 0.421 CD4_TCM L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 4.39e-01 0.0301 0.0389 0.421 CD4_TCM L2
ENSG00000112357 PEX7 387330 sc-eQTL 3.62e-01 -0.0825 0.0904 0.421 CD4_TCM L2
ENSG00000112378 PERP -897525 sc-eQTL 8.76e-01 0.012 0.0765 0.421 CD4_TCM L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 3.57e-01 0.0409 0.0443 0.421 CD4_TCM L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 8.75e-02 -0.0863 0.0503 0.421 CD4_TCM L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 7.94e-01 -0.0163 0.0623 0.421 CD4_TCM L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 1.42e-04 -0.263 0.0679 0.421 CD4_TEM L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 3.77e-01 0.044 0.0497 0.421 CD4_TEM L2
ENSG00000112357 PEX7 387330 sc-eQTL 9.89e-01 -0.00125 0.0907 0.421 CD4_TEM L2
ENSG00000112378 PERP -897525 sc-eQTL 8.58e-01 -0.0131 0.0735 0.421 CD4_TEM L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 3.19e-01 0.0465 0.0465 0.421 CD4_TEM L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 7.87e-01 -0.0194 0.072 0.421 CD4_TEM L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 4.86e-01 -0.0521 0.0747 0.421 CD4_TEM L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 1.89e-03 -0.196 0.0623 0.421 CD8_CTL L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 2.28e-01 0.0512 0.0424 0.421 CD8_CTL L2
ENSG00000112357 PEX7 387330 sc-eQTL 6.65e-02 0.161 0.087 0.421 CD8_CTL L2
ENSG00000112378 PERP -897525 sc-eQTL 2.81e-01 0.091 0.0841 0.421 CD8_CTL L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 7.30e-01 0.0185 0.0537 0.421 CD8_CTL L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 5.90e-01 0.0408 0.0757 0.421 CD8_CTL L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 7.67e-01 -0.0224 0.0754 0.421 CD8_CTL L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 6.50e-05 -0.248 0.0609 0.421 CD8_Naive L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 5.97e-01 -0.0234 0.0441 0.421 CD8_Naive L2
ENSG00000112357 PEX7 387330 sc-eQTL 8.33e-01 -0.0193 0.0916 0.421 CD8_Naive L2
ENSG00000112378 PERP -897525 sc-eQTL 3.58e-01 -0.064 0.0695 0.421 CD8_Naive L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 4.75e-01 0.0354 0.0494 0.421 CD8_Naive L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 4.67e-01 0.0427 0.0585 0.421 CD8_Naive L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 7.08e-01 -0.0274 0.0731 0.421 CD8_Naive L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 9.50e-02 -0.141 0.0842 0.421 CD8_TCM L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 3.16e-01 0.0638 0.0635 0.421 CD8_TCM L2
ENSG00000112357 PEX7 387330 sc-eQTL 2.31e-01 -0.117 0.097 0.421 CD8_TCM L2
ENSG00000112378 PERP -897525 sc-eQTL 9.70e-02 0.158 0.0947 0.421 CD8_TCM L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 3.84e-01 0.0401 0.0459 0.421 CD8_TCM L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 9.65e-01 0.00365 0.0821 0.421 CD8_TCM L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 7.16e-01 -0.0307 0.0841 0.421 CD8_TCM L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 5.17e-03 -0.227 0.0802 0.422 CD8_TEM L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 3.14e-01 0.0778 0.0771 0.422 CD8_TEM L2
ENSG00000112357 PEX7 387330 sc-eQTL 9.32e-01 0.00802 0.0942 0.422 CD8_TEM L2
ENSG00000112378 PERP -897525 sc-eQTL 1.74e-01 -0.133 0.0975 0.422 CD8_TEM L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 9.65e-01 0.00269 0.0604 0.422 CD8_TEM L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 2.45e-01 0.108 0.0931 0.422 CD8_TEM L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 3.17e-01 0.0897 0.0894 0.422 CD8_TEM L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 1.92e-02 -0.151 0.0638 0.424 MAIT L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 4.14e-01 -0.0439 0.0536 0.424 MAIT L2
ENSG00000112357 PEX7 387330 sc-eQTL 8.34e-01 -0.0184 0.0876 0.424 MAIT L2
ENSG00000112378 PERP -897525 sc-eQTL 2.77e-01 -0.0994 0.0911 0.424 MAIT L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 9.86e-01 0.000741 0.0435 0.424 MAIT L2
ENSG00000146410 MTFR2 959559 sc-eQTL 5.03e-01 0.0485 0.0724 0.424 MAIT L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 3.88e-01 0.0654 0.0756 0.424 MAIT L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 5.36e-01 0.0498 0.0803 0.424 MAIT L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 2.65e-02 -0.155 0.0695 0.427 NK_CD56bright L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 7.73e-01 0.015 0.0519 0.427 NK_CD56bright L2
ENSG00000112357 PEX7 387330 sc-eQTL 2.16e-01 0.113 0.0913 0.427 NK_CD56bright L2
ENSG00000112378 PERP -897525 sc-eQTL 3.73e-01 -0.0733 0.082 0.427 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 6.50e-01 0.0238 0.0524 0.427 NK_CD56bright L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 8.14e-01 0.0187 0.0797 0.427 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 7.72e-02 0.147 0.0829 0.427 NK_CD56bright L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 7.34e-06 -0.24 0.0521 0.422 NK_CD56dim L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 1.49e-01 -0.0516 0.0356 0.422 NK_CD56dim L2
ENSG00000112357 PEX7 387330 sc-eQTL 7.11e-01 -0.035 0.0942 0.422 NK_CD56dim L2
ENSG00000112378 PERP -897525 sc-eQTL 7.81e-01 0.0184 0.0662 0.422 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 8.80e-01 0.00777 0.0515 0.422 NK_CD56dim L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 9.26e-01 -0.00692 0.0741 0.422 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 6.60e-01 -0.0339 0.0771 0.422 NK_CD56dim L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 3.56e-04 -0.247 0.0681 0.432 NK_HLA L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 8.49e-01 -0.0113 0.0595 0.432 NK_HLA L2
ENSG00000112357 PEX7 387330 sc-eQTL 4.09e-01 -0.0738 0.0892 0.432 NK_HLA L2
ENSG00000112378 PERP -897525 sc-eQTL 6.21e-01 -0.0359 0.0724 0.432 NK_HLA L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 4.71e-01 -0.0402 0.0557 0.432 NK_HLA L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 1.94e-01 0.115 0.0882 0.432 NK_HLA L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 4.78e-01 0.0637 0.0897 0.432 NK_HLA L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 1.72e-05 -0.244 0.0554 0.422 NK_cytokine L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 3.89e-01 -0.0373 0.0432 0.422 NK_cytokine L2
ENSG00000112357 PEX7 387330 sc-eQTL 4.17e-01 0.0739 0.0908 0.422 NK_cytokine L2
ENSG00000112378 PERP -897525 sc-eQTL 8.66e-01 0.0117 0.069 0.422 NK_cytokine L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 7.73e-01 0.0149 0.0517 0.422 NK_cytokine L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 1.88e-01 0.0935 0.0708 0.422 NK_cytokine L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 6.80e-02 0.142 0.0773 0.422 NK_cytokine L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 2.91e-01 -0.117 0.11 0.415 PB L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 8.58e-01 0.0171 0.0954 0.415 PB L2
ENSG00000112357 PEX7 387330 sc-eQTL 8.01e-01 -0.0287 0.114 0.415 PB L2
ENSG00000112378 PERP -897525 sc-eQTL 3.60e-01 -0.065 0.0706 0.415 PB L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 6.44e-01 -0.0398 0.0859 0.415 PB L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 1.97e-01 -0.126 0.0972 0.415 PB L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 2.42e-01 -0.121 0.103 0.415 PB L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 9.06e-01 -0.0086 0.0726 0.424 Pro_T L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 4.39e-01 0.0583 0.0752 0.424 Pro_T L2
ENSG00000112357 PEX7 387330 sc-eQTL 6.58e-01 -0.039 0.0881 0.424 Pro_T L2
ENSG00000112378 PERP -897525 sc-eQTL 4.82e-01 0.0493 0.0701 0.424 Pro_T L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 1.54e-01 0.063 0.044 0.424 Pro_T L2
ENSG00000146410 MTFR2 959559 sc-eQTL 5.11e-01 -0.0403 0.0612 0.424 Pro_T L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 1.49e-02 0.207 0.0844 0.424 Pro_T L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 5.50e-01 -0.0514 0.0858 0.424 Pro_T L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 1.98e-02 -0.194 0.0828 0.421 Treg L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 5.09e-01 0.0358 0.0541 0.421 Treg L2
ENSG00000112357 PEX7 387330 sc-eQTL 1.51e-02 -0.214 0.0873 0.421 Treg L2
ENSG00000112378 PERP -897525 sc-eQTL 2.81e-01 -0.103 0.0955 0.421 Treg L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 8.26e-01 -0.0117 0.0533 0.421 Treg L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 9.09e-01 -0.00658 0.0577 0.421 Treg L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 6.15e-01 0.041 0.0812 0.421 Treg L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 4.13e-03 -0.211 0.0726 0.424 cDC L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 5.82e-01 -0.0413 0.0748 0.424 cDC L2
ENSG00000112357 PEX7 387330 sc-eQTL 9.20e-02 0.161 0.0953 0.424 cDC L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 8.01e-01 0.0185 0.0732 0.424 cDC L2
ENSG00000135525 MAP7 659075 sc-eQTL 1.45e-01 -0.124 0.0851 0.424 cDC L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 8.76e-01 0.0118 0.0753 0.424 cDC L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 2.43e-01 -0.111 0.095 0.424 cDC L2
ENSG00000286646 AL121933.2 425849 sc-eQTL 5.25e-02 0.189 0.0971 0.424 cDC L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 2.66e-15 -0.375 0.0439 0.421 cMono_IL1B L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 8.36e-01 -0.0113 0.0546 0.421 cMono_IL1B L2
ENSG00000112357 PEX7 387330 sc-eQTL 2.72e-02 -0.201 0.0906 0.421 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 9.44e-01 -0.00385 0.0548 0.421 cMono_IL1B L2
ENSG00000135525 MAP7 659075 sc-eQTL 7.81e-01 -0.022 0.0789 0.421 cMono_IL1B L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 2.47e-01 -0.066 0.0568 0.421 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 7.59e-01 0.018 0.0585 0.421 cMono_IL1B L2
ENSG00000286646 AL121933.2 425849 sc-eQTL 7.35e-01 -0.0248 0.0733 0.421 cMono_IL1B L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 9.44e-07 -0.282 0.0559 0.421 cMono_S100A L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 1.97e-01 -0.0783 0.0605 0.421 cMono_S100A L2
ENSG00000112357 PEX7 387330 sc-eQTL 5.62e-01 -0.0551 0.0948 0.421 cMono_S100A L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 8.40e-01 -0.0107 0.0525 0.421 cMono_S100A L2
ENSG00000135525 MAP7 659075 sc-eQTL 2.03e-01 -0.112 0.0881 0.421 cMono_S100A L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 1.54e-01 0.102 0.0711 0.421 cMono_S100A L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 7.78e-01 -0.0213 0.0754 0.421 cMono_S100A L2
ENSG00000286646 AL121933.2 425849 sc-eQTL 4.33e-01 0.0578 0.0735 0.421 cMono_S100A L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 1.38e-02 -0.217 0.0871 0.436 gdT L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 5.71e-01 -0.0444 0.0782 0.436 gdT L2
ENSG00000112357 PEX7 387330 sc-eQTL 5.45e-01 -0.0683 0.113 0.436 gdT L2
ENSG00000112378 PERP -897525 sc-eQTL 1.77e-03 -0.303 0.0951 0.436 gdT L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 9.33e-01 0.00458 0.0547 0.436 gdT L2
ENSG00000146410 MTFR2 959559 sc-eQTL 8.81e-02 -0.147 0.0855 0.436 gdT L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 6.29e-01 0.0561 0.116 0.436 gdT L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 8.50e-01 0.0188 0.0991 0.436 gdT L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 1.54e-04 -0.236 0.0613 0.422 intMono L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 5.72e-01 -0.0475 0.0838 0.422 intMono L2
ENSG00000112357 PEX7 387330 sc-eQTL 8.79e-01 -0.0131 0.0856 0.422 intMono L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 4.81e-01 0.0386 0.0548 0.422 intMono L2
ENSG00000135525 MAP7 659075 sc-eQTL 2.98e-02 0.182 0.0833 0.422 intMono L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 4.70e-01 0.0646 0.0891 0.422 intMono L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 6.57e-01 0.0363 0.0817 0.422 intMono L2
ENSG00000286646 AL121933.2 425849 sc-eQTL 6.36e-01 -0.0447 0.0942 0.422 intMono L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 1.09e-08 -0.396 0.0664 0.428 ncMono L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 7.27e-01 -0.0196 0.056 0.428 ncMono L2
ENSG00000112357 PEX7 387330 sc-eQTL 8.74e-01 -0.0141 0.0893 0.428 ncMono L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 4.12e-01 -0.0523 0.0637 0.428 ncMono L2
ENSG00000135525 MAP7 659075 sc-eQTL 7.25e-01 0.0278 0.0788 0.428 ncMono L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 9.09e-01 -0.00948 0.0829 0.428 ncMono L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 3.43e-02 -0.168 0.0789 0.428 ncMono L2
ENSG00000286646 AL121933.2 425849 sc-eQTL 2.23e-01 0.103 0.0838 0.428 ncMono L2
ENSG00000027697 IFNGR1 -9555 sc-eQTL 8.68e-01 -0.0143 0.0859 0.421 pDC L2
ENSG00000029363 BCLAF1 920043 sc-eQTL 7.07e-04 0.215 0.0621 0.421 pDC L2
ENSG00000112357 PEX7 387330 sc-eQTL 7.40e-01 0.0314 0.0946 0.421 pDC L2
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 6.04e-01 -0.0414 0.0796 0.421 pDC L2
ENSG00000135525 MAP7 659075 sc-eQTL 6.13e-01 -0.0335 0.066 0.421 pDC L2
ENSG00000197442 MAP3K5 417417 sc-eQTL 1.55e-01 -0.15 0.105 0.421 pDC L2
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 6.90e-01 0.0323 0.0808 0.421 pDC L2
ENSG00000286646 AL121933.2 425849 sc-eQTL 4.28e-01 -0.0773 0.0973 0.421 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -9555 sc-eQTL 1.86e-05 -0.308 0.0704 0.421 B_Memory LOneK1K
ENSG00000029363 BCLAF1 920043 sc-eQTL 6.36e-01 -0.0196 0.0413 0.421 B_Memory LOneK1K
ENSG00000112357 PEX7 387330 sc-eQTL 1.00e-01 0.139 0.084 0.421 B_Memory LOneK1K
ENSG00000112378 PERP -897525 sc-eQTL 8.48e-01 -0.0151 0.0786 0.421 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 2.78e-01 0.0563 0.0517 0.421 B_Memory LOneK1K
ENSG00000197442 MAP3K5 417417 sc-eQTL 2.58e-01 0.0777 0.0685 0.421 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 1.80e-01 0.117 0.0874 0.421 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -9555 sc-eQTL 9.26e-02 -0.127 0.0749 0.421 B_Naive LOneK1K
ENSG00000029363 BCLAF1 920043 sc-eQTL 7.06e-01 0.0131 0.0346 0.421 B_Naive LOneK1K
ENSG00000112357 PEX7 387330 sc-eQTL 7.30e-01 0.0317 0.0917 0.421 B_Naive LOneK1K
ENSG00000112378 PERP -897525 sc-eQTL 4.73e-01 -0.0591 0.0821 0.421 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 4.39e-01 0.0334 0.0431 0.421 B_Naive LOneK1K
ENSG00000197442 MAP3K5 417417 sc-eQTL 5.36e-01 0.0392 0.0632 0.421 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 7.28e-01 0.0267 0.0769 0.421 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -9555 sc-eQTL 5.53e-15 -0.372 0.0441 0.421 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 920043 sc-eQTL 6.79e-01 -0.0197 0.0475 0.421 CD14_Mono LOneK1K
ENSG00000112357 PEX7 387330 sc-eQTL 4.85e-02 -0.18 0.0908 0.421 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 8.60e-01 0.00832 0.0472 0.421 CD14_Mono LOneK1K
ENSG00000135525 MAP7 659075 sc-eQTL 8.73e-02 -0.14 0.0813 0.421 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 417417 sc-eQTL 7.30e-01 -0.0191 0.0553 0.421 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 9.50e-01 -0.00357 0.0566 0.421 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 425849 sc-eQTL 9.08e-01 0.00758 0.0658 0.421 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -9555 sc-eQTL 3.77e-09 -0.341 0.0553 0.422 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 920043 sc-eQTL 7.16e-01 -0.0198 0.0543 0.422 CD16_Mono LOneK1K
ENSG00000112357 PEX7 387330 sc-eQTL 8.69e-01 0.015 0.0908 0.422 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 7.86e-01 -0.0153 0.0562 0.422 CD16_Mono LOneK1K
ENSG00000135525 MAP7 659075 sc-eQTL 7.84e-02 0.154 0.0871 0.422 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 417417 sc-eQTL 9.77e-01 -0.00211 0.0721 0.422 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 3.12e-01 -0.0761 0.0751 0.422 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 425849 sc-eQTL 3.34e-01 0.0827 0.0853 0.422 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -9555 sc-eQTL 6.19e-06 -0.247 0.0532 0.422 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 920043 sc-eQTL 3.81e-01 -0.0284 0.0324 0.422 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 387330 sc-eQTL 9.38e-01 0.00732 0.0942 0.422 NK_CD56dim LOneK1K
ENSG00000112378 PERP -897525 sc-eQTL 4.91e-01 0.0403 0.0584 0.422 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -657320 sc-eQTL 7.99e-01 0.013 0.0509 0.422 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 417417 sc-eQTL 5.10e-01 0.0453 0.0687 0.422 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -658339 sc-eQTL 2.59e-01 0.0804 0.071 0.422 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -9555 pQTL 7.65e-28 -0.17 0.0152 0.0229 0.0191 0.44
ENSG00000027697 IFNGR1 -9555 eQTL 2.51e-125 -0.278 0.00999 0.0 0.0371 0.442
ENSG00000135525 MAP7 659075 eQTL 0.00254 0.071 0.0235 0.00874 0.00175 0.442

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -9555 3.49e-05 2.91e-05 5.8e-06 1.48e-05 5.32e-06 1.38e-05 3.97e-05 3.93e-06 2.6e-05 1.27e-05 3.38e-05 1.48e-05 4.46e-05 1.2e-05 6.24e-06 1.63e-05 1.55e-05 2.32e-05 7.47e-06 6.54e-06 1.36e-05 2.92e-05 2.78e-05 8.8e-06 4.01e-05 7.14e-06 1.18e-05 1.09e-05 2.89e-05 2.73e-05 1.76e-05 1.61e-06 2.48e-06 7.07e-06 1.1e-05 5.68e-06 3.11e-06 3.18e-06 4.65e-06 3.56e-06 1.71e-06 3.61e-05 3.39e-06 3.99e-07 2.34e-06 3.47e-06 3.88e-06 1.5e-06 1.57e-06
ENSG00000112357 \N 387330 7.76e-07 4e-07 6.99e-08 3.58e-07 1.07e-07 1.5e-07 4.68e-07 7.65e-08 2.78e-07 1.5e-07 4.39e-07 2.28e-07 6.27e-07 1.01e-07 1.01e-07 1.53e-07 9.53e-08 2.96e-07 9.97e-08 7.84e-08 1.52e-07 2.63e-07 3.03e-07 1.03e-07 6.39e-07 1.86e-07 1.72e-07 1.67e-07 2.66e-07 3.93e-07 2.31e-07 5.32e-08 4.96e-08 1.15e-07 1.97e-07 5.23e-08 6.39e-08 5.25e-08 5.28e-08 7.77e-08 4.27e-08 5.52e-07 3.25e-08 1.7e-08 6.21e-08 8.42e-09 9.1e-08 0.0 4.83e-08
ENSG00000135525 MAP7 659075 2.8e-07 1.34e-07 3.88e-08 1.9e-07 9.21e-08 9.8e-08 1.6e-07 5.37e-08 1.45e-07 4.94e-08 1.52e-07 8.68e-08 1.59e-07 7.13e-08 6.02e-08 7.36e-08 3.87e-08 1.27e-07 5.82e-08 4.16e-08 1.13e-07 1.27e-07 1.45e-07 3.03e-08 1.63e-07 1.14e-07 1.06e-07 9.61e-08 1.16e-07 1.07e-07 1.06e-07 3.87e-08 3.56e-08 8e-08 7.02e-08 3.62e-08 5.08e-08 9.23e-08 6.63e-08 3.87e-08 5.43e-08 1.48e-07 4.14e-08 1.13e-08 5.19e-08 1.99e-08 1.19e-07 3.92e-09 5.09e-08