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Genes within 1Mb (chr6:137208790:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -10659 sc-eQTL 1.57e-02 -0.169 0.0694 0.391 B L1
ENSG00000029363 BCLAF1 918939 sc-eQTL 3.77e-01 0.0277 0.0313 0.391 B L1
ENSG00000112357 PEX7 386226 sc-eQTL 6.07e-01 0.0429 0.0833 0.391 B L1
ENSG00000112378 PERP -898629 sc-eQTL 5.70e-01 -0.0314 0.0551 0.391 B L1
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 1.74e-01 0.0603 0.0442 0.391 B L1
ENSG00000197442 MAP3K5 416313 sc-eQTL 3.02e-01 0.0639 0.0618 0.391 B L1
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 2.64e-01 0.0781 0.0697 0.391 B L1
ENSG00000027697 IFNGR1 -10659 sc-eQTL 1.32e-04 -0.177 0.0454 0.391 CD4T L1
ENSG00000029363 BCLAF1 918939 sc-eQTL 2.43e-01 0.0415 0.0354 0.391 CD4T L1
ENSG00000112357 PEX7 386226 sc-eQTL 1.81e-02 -0.178 0.0747 0.391 CD4T L1
ENSG00000112378 PERP -898629 sc-eQTL 9.40e-01 -0.0038 0.0508 0.391 CD4T L1
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 1.66e-01 0.0659 0.0474 0.391 CD4T L1
ENSG00000197442 MAP3K5 416313 sc-eQTL 5.91e-01 -0.0195 0.0362 0.391 CD4T L1
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 1.26e-01 0.0915 0.0596 0.391 CD4T L1
ENSG00000027697 IFNGR1 -10659 sc-eQTL 2.07e-04 -0.194 0.0514 0.391 CD8T L1
ENSG00000029363 BCLAF1 918939 sc-eQTL 3.65e-01 0.0325 0.0358 0.391 CD8T L1
ENSG00000112357 PEX7 386226 sc-eQTL 2.87e-01 0.0942 0.0883 0.391 CD8T L1
ENSG00000112378 PERP -898629 sc-eQTL 9.01e-02 0.0979 0.0575 0.391 CD8T L1
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 4.93e-01 0.0306 0.0446 0.391 CD8T L1
ENSG00000197442 MAP3K5 416313 sc-eQTL 9.92e-01 0.000476 0.0472 0.391 CD8T L1
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 8.63e-01 0.0113 0.0656 0.391 CD8T L1
ENSG00000027697 IFNGR1 -10659 sc-eQTL 1.80e-01 -0.0889 0.0661 0.399 DC L1
ENSG00000029363 BCLAF1 918939 sc-eQTL 1.26e-01 0.0912 0.0594 0.399 DC L1
ENSG00000112357 PEX7 386226 sc-eQTL 1.77e-01 0.126 0.0931 0.399 DC L1
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 2.83e-01 -0.0761 0.0708 0.399 DC L1
ENSG00000135525 MAP7 657971 sc-eQTL 4.54e-01 -0.0576 0.0768 0.399 DC L1
ENSG00000197442 MAP3K5 416313 sc-eQTL 3.51e-01 -0.0687 0.0735 0.399 DC L1
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 7.26e-01 -0.0254 0.0723 0.399 DC L1
ENSG00000286646 AL121933.2 424745 sc-eQTL 6.41e-01 0.0448 0.0961 0.399 DC L1
ENSG00000027697 IFNGR1 -10659 sc-eQTL 4.46e-13 -0.369 0.0478 0.391 Mono L1
ENSG00000029363 BCLAF1 918939 sc-eQTL 7.60e-01 -0.0141 0.0462 0.391 Mono L1
ENSG00000112357 PEX7 386226 sc-eQTL 1.13e-01 -0.144 0.0905 0.391 Mono L1
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 9.59e-01 0.00233 0.0459 0.391 Mono L1
ENSG00000135525 MAP7 657971 sc-eQTL 1.88e-01 -0.106 0.08 0.391 Mono L1
ENSG00000197442 MAP3K5 416313 sc-eQTL 9.28e-01 -0.00482 0.0535 0.391 Mono L1
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 7.09e-01 -0.0213 0.0568 0.391 Mono L1
ENSG00000286646 AL121933.2 424745 sc-eQTL 6.46e-01 -0.0299 0.0648 0.391 Mono L1
ENSG00000027697 IFNGR1 -10659 sc-eQTL 1.78e-04 -0.221 0.0578 0.391 NK L1
ENSG00000029363 BCLAF1 918939 sc-eQTL 2.25e-01 -0.0385 0.0317 0.391 NK L1
ENSG00000112357 PEX7 386226 sc-eQTL 9.08e-01 0.0107 0.0923 0.391 NK L1
ENSG00000112378 PERP -898629 sc-eQTL 7.41e-01 0.0192 0.0582 0.391 NK L1
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 7.83e-01 0.0137 0.0498 0.391 NK L1
ENSG00000197442 MAP3K5 416313 sc-eQTL 4.55e-01 0.0533 0.0712 0.391 NK L1
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 2.15e-01 0.0874 0.0703 0.391 NK L1
ENSG00000027697 IFNGR1 -10659 sc-eQTL 9.28e-02 -0.0957 0.0567 0.391 Other_T L1
ENSG00000029363 BCLAF1 918939 sc-eQTL 9.69e-01 -0.00189 0.0479 0.391 Other_T L1
ENSG00000112357 PEX7 386226 sc-eQTL 6.79e-01 0.0385 0.093 0.391 Other_T L1
ENSG00000112378 PERP -898629 sc-eQTL 1.87e-01 -0.0984 0.0744 0.391 Other_T L1
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 9.59e-01 0.00184 0.0355 0.391 Other_T L1
ENSG00000146410 MTFR2 958455 sc-eQTL 7.40e-01 -0.0178 0.0538 0.391 Other_T L1
ENSG00000197442 MAP3K5 416313 sc-eQTL 5.89e-01 0.0371 0.0685 0.391 Other_T L1
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 4.88e-01 0.0489 0.0704 0.391 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -10659 sc-eQTL 3.49e-02 -0.191 0.0899 0.383 B_Activated L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 5.23e-01 -0.0472 0.0739 0.383 B_Activated L2
ENSG00000112357 PEX7 386226 sc-eQTL 6.24e-01 -0.044 0.0895 0.383 B_Activated L2
ENSG00000112378 PERP -898629 sc-eQTL 9.66e-01 -0.00196 0.0464 0.383 B_Activated L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 1.35e-01 0.134 0.0894 0.383 B_Activated L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 2.99e-01 0.105 0.1 0.383 B_Activated L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 3.99e-02 0.161 0.0776 0.383 B_Activated L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 5.50e-02 -0.16 0.0831 0.388 B_Intermediate L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 6.54e-01 0.0214 0.0477 0.388 B_Intermediate L2
ENSG00000112357 PEX7 386226 sc-eQTL 2.93e-01 0.0922 0.0875 0.388 B_Intermediate L2
ENSG00000112378 PERP -898629 sc-eQTL 1.31e-01 -0.121 0.0795 0.388 B_Intermediate L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 5.73e-01 0.0354 0.0627 0.388 B_Intermediate L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 6.50e-01 0.0344 0.0758 0.388 B_Intermediate L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 3.08e-01 0.0907 0.0888 0.388 B_Intermediate L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 2.43e-03 -0.274 0.0891 0.392 B_Memory L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 6.01e-01 -0.0283 0.0541 0.392 B_Memory L2
ENSG00000112357 PEX7 386226 sc-eQTL 2.01e-01 0.118 0.0916 0.392 B_Memory L2
ENSG00000112378 PERP -898629 sc-eQTL 6.12e-01 0.044 0.0865 0.392 B_Memory L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 3.28e-01 0.0583 0.0594 0.392 B_Memory L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 6.61e-01 0.0357 0.0813 0.392 B_Memory L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 7.89e-01 0.0237 0.0886 0.392 B_Memory L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 2.12e-02 -0.163 0.0702 0.391 B_Naive1 L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 4.21e-01 0.0327 0.0405 0.391 B_Naive1 L2
ENSG00000112357 PEX7 386226 sc-eQTL 6.09e-01 -0.048 0.0937 0.391 B_Naive1 L2
ENSG00000112378 PERP -898629 sc-eQTL 3.89e-01 -0.0706 0.0818 0.391 B_Naive1 L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 2.08e-01 0.0598 0.0474 0.391 B_Naive1 L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 7.47e-02 0.119 0.0663 0.391 B_Naive1 L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 1.33e-01 0.112 0.0741 0.391 B_Naive1 L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 6.95e-01 0.0344 0.0875 0.391 B_Naive2 L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 7.03e-01 0.0194 0.0507 0.391 B_Naive2 L2
ENSG00000112357 PEX7 386226 sc-eQTL 4.25e-01 0.0764 0.0956 0.391 B_Naive2 L2
ENSG00000112378 PERP -898629 sc-eQTL 6.65e-01 -0.0302 0.0697 0.391 B_Naive2 L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 7.99e-01 0.0178 0.0697 0.391 B_Naive2 L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 5.25e-01 -0.0472 0.0741 0.391 B_Naive2 L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 9.73e-01 0.00309 0.0901 0.391 B_Naive2 L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 4.79e-02 -0.166 0.0833 0.389 CD4_CTL L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 4.06e-01 0.062 0.0745 0.389 CD4_CTL L2
ENSG00000112357 PEX7 386226 sc-eQTL 2.95e-01 -0.0977 0.093 0.389 CD4_CTL L2
ENSG00000112378 PERP -898629 sc-eQTL 2.88e-01 -0.1 0.0943 0.389 CD4_CTL L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 3.61e-02 0.115 0.0546 0.389 CD4_CTL L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 7.04e-01 0.0335 0.088 0.389 CD4_CTL L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 8.63e-01 -0.0148 0.0858 0.389 CD4_CTL L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 6.34e-04 -0.151 0.0434 0.391 CD4_Naive L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 5.09e-01 0.0237 0.0358 0.391 CD4_Naive L2
ENSG00000112357 PEX7 386226 sc-eQTL 7.38e-02 -0.15 0.0837 0.391 CD4_Naive L2
ENSG00000112378 PERP -898629 sc-eQTL 6.02e-01 -0.0363 0.0695 0.391 CD4_Naive L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 2.76e-01 0.0531 0.0487 0.391 CD4_Naive L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 9.47e-01 0.00237 0.0358 0.391 CD4_Naive L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 6.39e-02 0.117 0.0627 0.391 CD4_Naive L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 1.34e-01 -0.0931 0.0618 0.391 CD4_TCM L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 3.17e-01 0.0393 0.0391 0.391 CD4_TCM L2
ENSG00000112357 PEX7 386226 sc-eQTL 1.65e-01 -0.127 0.0909 0.391 CD4_TCM L2
ENSG00000112378 PERP -898629 sc-eQTL 6.96e-01 0.0302 0.0771 0.391 CD4_TCM L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 2.80e-01 0.0483 0.0447 0.391 CD4_TCM L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 1.43e-01 -0.0746 0.0508 0.391 CD4_TCM L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 8.83e-01 0.00926 0.0628 0.391 CD4_TCM L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 1.05e-03 -0.229 0.069 0.391 CD4_TEM L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 2.89e-01 0.0532 0.0501 0.391 CD4_TEM L2
ENSG00000112357 PEX7 386226 sc-eQTL 8.05e-01 -0.0226 0.0914 0.391 CD4_TEM L2
ENSG00000112378 PERP -898629 sc-eQTL 8.87e-01 0.0106 0.0741 0.391 CD4_TEM L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 2.82e-01 0.0506 0.0469 0.391 CD4_TEM L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 9.74e-01 0.00237 0.0726 0.391 CD4_TEM L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 4.94e-01 -0.0516 0.0753 0.391 CD4_TEM L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 8.93e-04 -0.21 0.0624 0.391 CD8_CTL L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 4.26e-01 0.034 0.0427 0.391 CD8_CTL L2
ENSG00000112357 PEX7 386226 sc-eQTL 2.54e-02 0.196 0.0871 0.391 CD8_CTL L2
ENSG00000112378 PERP -898629 sc-eQTL 7.18e-02 0.152 0.0841 0.391 CD8_CTL L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 6.20e-01 0.0267 0.0539 0.391 CD8_CTL L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 7.59e-01 0.0233 0.0761 0.391 CD8_CTL L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 9.43e-01 0.00543 0.0758 0.391 CD8_CTL L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 3.70e-03 -0.183 0.0624 0.391 CD8_Naive L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 5.13e-01 -0.0291 0.0444 0.391 CD8_Naive L2
ENSG00000112357 PEX7 386226 sc-eQTL 8.23e-01 -0.0206 0.0922 0.391 CD8_Naive L2
ENSG00000112378 PERP -898629 sc-eQTL 4.78e-01 -0.0498 0.07 0.391 CD8_Naive L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 3.59e-01 0.0457 0.0497 0.391 CD8_Naive L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 5.72e-01 0.0333 0.0589 0.391 CD8_Naive L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 9.70e-01 0.00279 0.0736 0.391 CD8_Naive L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 3.07e-01 -0.0864 0.0844 0.389 CD8_TCM L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 3.47e-01 0.0598 0.0634 0.389 CD8_TCM L2
ENSG00000112357 PEX7 386226 sc-eQTL 3.22e-01 -0.0962 0.0969 0.389 CD8_TCM L2
ENSG00000112378 PERP -898629 sc-eQTL 9.84e-02 0.157 0.0945 0.389 CD8_TCM L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 2.67e-01 0.0509 0.0457 0.389 CD8_TCM L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 7.39e-01 0.0274 0.0819 0.389 CD8_TCM L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 4.48e-01 -0.0637 0.0838 0.389 CD8_TCM L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 4.11e-03 -0.232 0.0799 0.393 CD8_TEM L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 3.37e-01 0.0739 0.0768 0.393 CD8_TEM L2
ENSG00000112357 PEX7 386226 sc-eQTL 7.25e-01 0.033 0.0939 0.393 CD8_TEM L2
ENSG00000112378 PERP -898629 sc-eQTL 3.03e-01 -0.101 0.0974 0.393 CD8_TEM L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 9.62e-01 -0.00285 0.0602 0.393 CD8_TEM L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 4.18e-01 0.0754 0.0929 0.393 CD8_TEM L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 4.31e-01 0.0704 0.0892 0.393 CD8_TEM L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 5.72e-02 -0.123 0.0646 0.394 MAIT L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 7.95e-01 -0.0141 0.0541 0.394 MAIT L2
ENSG00000112357 PEX7 386226 sc-eQTL 9.74e-01 -0.00292 0.0883 0.394 MAIT L2
ENSG00000112378 PERP -898629 sc-eQTL 1.25e-01 -0.141 0.0916 0.394 MAIT L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 9.54e-01 -0.00253 0.0438 0.394 MAIT L2
ENSG00000146410 MTFR2 958455 sc-eQTL 4.61e-01 0.0539 0.0729 0.394 MAIT L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 2.27e-01 0.0922 0.0761 0.394 MAIT L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 3.82e-01 0.0709 0.0809 0.394 MAIT L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 5.68e-02 -0.135 0.0703 0.398 NK_CD56bright L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 6.53e-01 0.0236 0.0523 0.398 NK_CD56bright L2
ENSG00000112357 PEX7 386226 sc-eQTL 2.49e-01 0.106 0.0922 0.398 NK_CD56bright L2
ENSG00000112378 PERP -898629 sc-eQTL 7.04e-01 -0.0315 0.0828 0.398 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 7.48e-01 0.017 0.0528 0.398 NK_CD56bright L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 5.35e-01 0.0499 0.0803 0.398 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 5.28e-02 0.162 0.0834 0.398 NK_CD56bright L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 7.32e-05 -0.215 0.0531 0.392 NK_CD56dim L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 3.13e-02 -0.0772 0.0356 0.392 NK_CD56dim L2
ENSG00000112357 PEX7 386226 sc-eQTL 6.83e-01 -0.0389 0.095 0.392 NK_CD56dim L2
ENSG00000112378 PERP -898629 sc-eQTL 6.29e-01 0.0323 0.0668 0.392 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 7.64e-01 -0.0156 0.0519 0.392 NK_CD56dim L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 7.70e-01 0.0219 0.0748 0.392 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 6.44e-01 -0.036 0.0778 0.392 NK_CD56dim L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 3.22e-04 -0.252 0.0688 0.402 NK_HLA L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 8.97e-01 -0.00784 0.0602 0.402 NK_HLA L2
ENSG00000112357 PEX7 386226 sc-eQTL 3.56e-01 -0.0834 0.0901 0.402 NK_HLA L2
ENSG00000112378 PERP -898629 sc-eQTL 6.89e-01 -0.0293 0.0732 0.402 NK_HLA L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 4.42e-01 -0.0434 0.0563 0.402 NK_HLA L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 2.74e-01 0.098 0.0893 0.402 NK_HLA L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 3.18e-01 0.0907 0.0906 0.402 NK_HLA L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 4.41e-05 -0.234 0.0561 0.392 NK_cytokine L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 3.51e-01 -0.0407 0.0435 0.392 NK_cytokine L2
ENSG00000112357 PEX7 386226 sc-eQTL 6.34e-01 0.0438 0.0917 0.392 NK_cytokine L2
ENSG00000112378 PERP -898629 sc-eQTL 9.69e-01 -0.00271 0.0696 0.392 NK_cytokine L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 7.90e-01 0.0139 0.0522 0.392 NK_cytokine L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 1.31e-01 0.108 0.0713 0.392 NK_cytokine L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 1.32e-01 0.118 0.0782 0.392 NK_cytokine L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 2.13e-01 -0.139 0.111 0.381 PB L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 9.32e-01 0.0083 0.0967 0.381 PB L2
ENSG00000112357 PEX7 386226 sc-eQTL 3.20e-01 -0.114 0.115 0.381 PB L2
ENSG00000112378 PERP -898629 sc-eQTL 5.40e-01 -0.044 0.0717 0.381 PB L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 8.78e-01 -0.0134 0.0871 0.381 PB L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 4.82e-01 -0.0698 0.099 0.381 PB L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 2.11e-01 -0.131 0.104 0.381 PB L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 6.86e-01 -0.0297 0.0732 0.393 Pro_T L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 3.16e-01 0.0761 0.0757 0.393 Pro_T L2
ENSG00000112357 PEX7 386226 sc-eQTL 6.65e-01 -0.0386 0.0889 0.393 Pro_T L2
ENSG00000112378 PERP -898629 sc-eQTL 4.31e-01 0.0557 0.0706 0.393 Pro_T L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 4.07e-01 0.037 0.0445 0.393 Pro_T L2
ENSG00000146410 MTFR2 958455 sc-eQTL 7.52e-01 -0.0195 0.0618 0.393 Pro_T L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 2.35e-02 0.195 0.0853 0.393 Pro_T L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 2.67e-01 -0.096 0.0863 0.393 Pro_T L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 1.09e-01 -0.134 0.0835 0.391 Treg L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 1.60e-01 0.0762 0.054 0.391 Treg L2
ENSG00000112357 PEX7 386226 sc-eQTL 3.39e-02 -0.187 0.0878 0.391 Treg L2
ENSG00000112378 PERP -898629 sc-eQTL 2.08e-01 -0.121 0.0956 0.391 Treg L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 9.23e-01 0.0052 0.0534 0.391 Treg L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 6.98e-01 -0.0225 0.0578 0.391 Treg L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 4.96e-01 0.0555 0.0814 0.391 Treg L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 2.97e-02 -0.163 0.0743 0.398 cDC L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 8.27e-01 -0.0166 0.0759 0.398 cDC L2
ENSG00000112357 PEX7 386226 sc-eQTL 1.12e-01 0.155 0.0968 0.398 cDC L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 9.03e-01 0.0091 0.0743 0.398 cDC L2
ENSG00000135525 MAP7 657971 sc-eQTL 2.35e-01 -0.103 0.0865 0.398 cDC L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 6.33e-01 -0.0365 0.0764 0.398 cDC L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 1.41e-01 -0.142 0.0962 0.398 cDC L2
ENSG00000286646 AL121933.2 424745 sc-eQTL 1.26e-01 0.152 0.0989 0.398 cDC L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 1.88e-12 -0.34 0.0454 0.391 cMono_IL1B L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 6.88e-01 -0.022 0.0547 0.391 cMono_IL1B L2
ENSG00000112357 PEX7 386226 sc-eQTL 7.63e-02 -0.162 0.0911 0.391 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 8.30e-01 0.0118 0.0549 0.391 cMono_IL1B L2
ENSG00000135525 MAP7 657971 sc-eQTL 7.80e-01 -0.0221 0.0791 0.391 cMono_IL1B L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 1.97e-01 -0.0736 0.0569 0.391 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 6.43e-01 0.0272 0.0587 0.391 cMono_IL1B L2
ENSG00000286646 AL121933.2 424745 sc-eQTL 5.81e-01 -0.0406 0.0734 0.391 cMono_IL1B L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 5.31e-06 -0.263 0.0563 0.391 cMono_S100A L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 1.58e-01 -0.0856 0.0604 0.391 cMono_S100A L2
ENSG00000112357 PEX7 386226 sc-eQTL 4.23e-01 -0.076 0.0947 0.391 cMono_S100A L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 7.97e-01 -0.0135 0.0525 0.391 cMono_S100A L2
ENSG00000135525 MAP7 657971 sc-eQTL 1.09e-01 -0.141 0.0879 0.391 cMono_S100A L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 1.22e-01 0.11 0.071 0.391 cMono_S100A L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 8.95e-01 -0.00995 0.0754 0.391 cMono_S100A L2
ENSG00000286646 AL121933.2 424745 sc-eQTL 6.63e-01 0.0321 0.0736 0.391 cMono_S100A L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 1.04e-02 -0.227 0.0876 0.409 gdT L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 6.31e-01 -0.038 0.0789 0.409 gdT L2
ENSG00000112357 PEX7 386226 sc-eQTL 4.32e-01 -0.0894 0.113 0.409 gdT L2
ENSG00000112378 PERP -898629 sc-eQTL 6.02e-04 -0.334 0.0952 0.409 gdT L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 8.38e-01 0.0113 0.0551 0.409 gdT L2
ENSG00000146410 MTFR2 958455 sc-eQTL 2.04e-01 -0.11 0.0865 0.409 gdT L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 7.13e-01 0.043 0.117 0.409 gdT L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 5.08e-01 0.0663 0.0997 0.409 gdT L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 3.86e-05 -0.257 0.061 0.391 intMono L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 4.98e-01 -0.057 0.084 0.391 intMono L2
ENSG00000112357 PEX7 386226 sc-eQTL 7.56e-01 0.0267 0.0858 0.391 intMono L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 2.88e-01 0.0584 0.0548 0.391 intMono L2
ENSG00000135525 MAP7 657971 sc-eQTL 4.94e-02 0.165 0.0836 0.391 intMono L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 2.79e-01 0.0969 0.0892 0.391 intMono L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 7.88e-01 0.0221 0.0819 0.391 intMono L2
ENSG00000286646 AL121933.2 424745 sc-eQTL 9.03e-01 -0.0115 0.0945 0.391 intMono L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 1.32e-07 -0.369 0.0674 0.396 ncMono L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 9.59e-01 -0.0029 0.0561 0.396 ncMono L2
ENSG00000112357 PEX7 386226 sc-eQTL 7.60e-01 -0.0274 0.0895 0.396 ncMono L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 5.25e-01 -0.0407 0.0639 0.396 ncMono L2
ENSG00000135525 MAP7 657971 sc-eQTL 8.67e-01 0.0132 0.079 0.396 ncMono L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 6.60e-01 -0.0366 0.083 0.396 ncMono L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 7.02e-02 -0.144 0.0793 0.396 ncMono L2
ENSG00000286646 AL121933.2 424745 sc-eQTL 3.49e-01 0.079 0.0841 0.396 ncMono L2
ENSG00000027697 IFNGR1 -10659 sc-eQTL 6.50e-01 0.0395 0.087 0.398 pDC L2
ENSG00000029363 BCLAF1 918939 sc-eQTL 4.84e-03 0.182 0.0636 0.398 pDC L2
ENSG00000112357 PEX7 386226 sc-eQTL 6.19e-01 0.0477 0.0958 0.398 pDC L2
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 8.27e-01 -0.0177 0.0807 0.398 pDC L2
ENSG00000135525 MAP7 657971 sc-eQTL 7.18e-01 -0.0242 0.0669 0.398 pDC L2
ENSG00000197442 MAP3K5 416313 sc-eQTL 2.04e-01 -0.136 0.107 0.398 pDC L2
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 5.20e-01 0.0527 0.0818 0.398 pDC L2
ENSG00000286646 AL121933.2 424745 sc-eQTL 4.53e-01 -0.0742 0.0986 0.398 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -10659 sc-eQTL 2.08e-04 -0.27 0.0714 0.391 B_Memory LOneK1K
ENSG00000029363 BCLAF1 918939 sc-eQTL 9.99e-01 2.62e-05 0.0414 0.391 B_Memory LOneK1K
ENSG00000112357 PEX7 386226 sc-eQTL 1.70e-01 0.116 0.0845 0.391 B_Memory LOneK1K
ENSG00000112378 PERP -898629 sc-eQTL 9.23e-01 -0.00761 0.0789 0.391 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 3.71e-01 0.0466 0.052 0.391 B_Memory LOneK1K
ENSG00000197442 MAP3K5 416313 sc-eQTL 1.85e-01 0.0912 0.0686 0.391 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 2.04e-01 0.112 0.0877 0.391 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -10659 sc-eQTL 2.40e-01 -0.0889 0.0755 0.391 B_Naive LOneK1K
ENSG00000029363 BCLAF1 918939 sc-eQTL 4.17e-01 0.0282 0.0347 0.391 B_Naive LOneK1K
ENSG00000112357 PEX7 386226 sc-eQTL 9.84e-01 -0.00184 0.0922 0.391 B_Naive LOneK1K
ENSG00000112378 PERP -898629 sc-eQTL 2.18e-01 -0.102 0.0822 0.391 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 5.01e-01 0.0292 0.0433 0.391 B_Naive LOneK1K
ENSG00000197442 MAP3K5 416313 sc-eQTL 4.26e-01 0.0506 0.0635 0.391 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 3.19e-01 0.0769 0.077 0.391 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -10659 sc-eQTL 2.60e-12 -0.338 0.0455 0.391 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 918939 sc-eQTL 5.45e-01 -0.0288 0.0476 0.391 CD14_Mono LOneK1K
ENSG00000112357 PEX7 386226 sc-eQTL 5.84e-02 -0.173 0.091 0.391 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 6.97e-01 0.0184 0.0473 0.391 CD14_Mono LOneK1K
ENSG00000135525 MAP7 657971 sc-eQTL 5.93e-02 -0.154 0.0814 0.391 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 416313 sc-eQTL 7.61e-01 -0.0168 0.0554 0.391 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 9.07e-01 0.00662 0.0567 0.391 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 424745 sc-eQTL 8.53e-01 -0.0122 0.066 0.391 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -10659 sc-eQTL 1.90e-09 -0.346 0.0551 0.392 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 918939 sc-eQTL 8.24e-01 -0.0121 0.0543 0.392 CD16_Mono LOneK1K
ENSG00000112357 PEX7 386226 sc-eQTL 7.16e-01 0.033 0.0907 0.392 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 9.29e-01 0.00503 0.0562 0.392 CD16_Mono LOneK1K
ENSG00000135525 MAP7 657971 sc-eQTL 1.37e-01 0.13 0.0872 0.392 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 416313 sc-eQTL 8.19e-01 -0.0165 0.072 0.392 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 3.84e-01 -0.0656 0.0752 0.392 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 424745 sc-eQTL 3.88e-01 0.0738 0.0853 0.392 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -10659 sc-eQTL 2.18e-05 -0.235 0.054 0.392 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 918939 sc-eQTL 1.97e-01 -0.0422 0.0326 0.392 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 386226 sc-eQTL 8.33e-01 -0.0201 0.0952 0.392 NK_CD56dim LOneK1K
ENSG00000112378 PERP -898629 sc-eQTL 4.93e-01 0.0405 0.059 0.392 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -658424 sc-eQTL 9.18e-01 0.00532 0.0514 0.392 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 416313 sc-eQTL 3.73e-01 0.0619 0.0693 0.392 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -659443 sc-eQTL 2.76e-01 0.0784 0.0717 0.392 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -10659 pQTL 1.51e-19 -0.142 0.0155 0.0 0.0 0.409
ENSG00000027697 IFNGR1 -10659 eQTL 4.0799999999999996e-108 -0.262 0.0104 0.0 0.00196 0.412
ENSG00000135525 MAP7 657971 eQTL 0.00505 0.0656 0.0233 0.00599 0.00112 0.412

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -10659 3.04e-05 3.01e-05 6.26e-06 1.51e-05 5.6e-06 1.37e-05 4.26e-05 4.55e-06 3.01e-05 1.53e-05 3.69e-05 1.67e-05 4.49e-05 1.28e-05 6.68e-06 1.73e-05 1.56e-05 2.44e-05 7.5e-06 6.6e-06 1.42e-05 3.13e-05 3.03e-05 8.82e-06 4.2e-05 7.8e-06 1.32e-05 1.24e-05 3.09e-05 2.47e-05 1.92e-05 1.64e-06 2.41e-06 6.95e-06 1.15e-05 5.68e-06 2.93e-06 3.19e-06 4.48e-06 3.28e-06 1.75e-06 3.49e-05 3.39e-06 3.66e-07 2.49e-06 3.66e-06 4.13e-06 1.6e-06 1.5e-06
ENSG00000112357 \N 386226 1.49e-06 1.36e-06 3.22e-07 1.27e-06 3.57e-07 6.48e-07 1.41e-06 3.51e-07 1.73e-06 6.98e-07 2.06e-06 1.15e-06 2.56e-06 4.46e-07 4.48e-07 9.88e-07 1.13e-06 1.09e-06 5.38e-07 5.47e-07 6.56e-07 1.92e-06 1.13e-06 6.22e-07 2.34e-06 8.55e-07 1.06e-06 9.36e-07 1.62e-06 1.37e-06 7.8e-07 3.27e-07 3.21e-07 6.25e-07 7.08e-07 6.4e-07 7.95e-07 3.5e-07 5.35e-07 3.5e-07 1.96e-07 1.71e-06 4.93e-07 1.6e-07 3.21e-07 3.02e-07 3.78e-07 2.31e-07 2.75e-07
ENSG00000135525 MAP7 657971 8.63e-07 5.18e-07 3.06e-07 4.36e-07 1.05e-07 2.42e-07 5.31e-07 7.56e-08 4.19e-07 2.34e-07 6.39e-07 3.61e-07 7.02e-07 1.52e-07 2.07e-07 2.83e-07 4.3e-07 4.11e-07 2.79e-07 1.69e-07 2.5e-07 3.8e-07 3.3e-07 1.63e-07 7.72e-07 2.55e-07 2.52e-07 2.59e-07 2.84e-07 6.42e-07 2.43e-07 4.44e-08 5.3e-08 1.73e-07 3.35e-07 1.66e-07 3.79e-07 9.33e-08 6.49e-08 1.79e-08 2.36e-07 4.16e-07 6.81e-08 4.23e-08 1.69e-07 1.35e-08 1.27e-07 5.73e-08 5.76e-08