logo

Genes within 1Mb (chr6:137198643:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -20806 sc-eQTL 1.03e-02 -0.19 0.0735 0.288 B L1
ENSG00000029363 BCLAF1 908792 sc-eQTL 1.73e-01 0.0453 0.0331 0.288 B L1
ENSG00000112357 PEX7 376079 sc-eQTL 1.99e-01 0.113 0.088 0.288 B L1
ENSG00000112378 PERP -908776 sc-eQTL 6.61e-01 -0.0256 0.0584 0.288 B L1
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 1.20e-01 0.0732 0.0468 0.288 B L1
ENSG00000197442 MAP3K5 406166 sc-eQTL 3.53e-01 0.061 0.0655 0.288 B L1
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 2.59e-01 0.0835 0.0739 0.288 B L1
ENSG00000027697 IFNGR1 -20806 sc-eQTL 1.79e-03 -0.155 0.049 0.288 CD4T L1
ENSG00000029363 BCLAF1 908792 sc-eQTL 1.60e-01 0.0533 0.0378 0.288 CD4T L1
ENSG00000112357 PEX7 376079 sc-eQTL 3.03e-03 -0.237 0.0791 0.288 CD4T L1
ENSG00000112378 PERP -908776 sc-eQTL 8.62e-01 0.00943 0.0542 0.288 CD4T L1
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 4.30e-01 0.0401 0.0507 0.288 CD4T L1
ENSG00000197442 MAP3K5 406166 sc-eQTL 9.92e-01 -0.000376 0.0387 0.288 CD4T L1
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 4.59e-02 0.127 0.0634 0.288 CD4T L1
ENSG00000027697 IFNGR1 -20806 sc-eQTL 3.51e-06 -0.258 0.0542 0.288 CD8T L1
ENSG00000029363 BCLAF1 908792 sc-eQTL 6.62e-01 0.0169 0.0386 0.288 CD8T L1
ENSG00000112357 PEX7 376079 sc-eQTL 8.09e-01 0.023 0.0951 0.288 CD8T L1
ENSG00000112378 PERP -908776 sc-eQTL 6.48e-01 0.0284 0.0621 0.288 CD8T L1
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 4.95e-01 0.0328 0.0479 0.288 CD8T L1
ENSG00000197442 MAP3K5 406166 sc-eQTL 4.03e-01 0.0424 0.0506 0.288 CD8T L1
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 4.97e-01 0.0479 0.0704 0.288 CD8T L1
ENSG00000027697 IFNGR1 -20806 sc-eQTL 9.70e-01 0.0026 0.0702 0.293 DC L1
ENSG00000029363 BCLAF1 908792 sc-eQTL 4.37e-01 0.0492 0.0631 0.293 DC L1
ENSG00000112357 PEX7 376079 sc-eQTL 7.14e-01 0.0363 0.0989 0.293 DC L1
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 1.98e-01 -0.0966 0.0747 0.293 DC L1
ENSG00000135525 MAP7 647824 sc-eQTL 7.01e-01 -0.0312 0.0813 0.293 DC L1
ENSG00000197442 MAP3K5 406166 sc-eQTL 2.06e-01 -0.0985 0.0776 0.293 DC L1
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 6.06e-01 -0.0395 0.0764 0.293 DC L1
ENSG00000286646 AL121933.2 414598 sc-eQTL 9.29e-01 0.00903 0.102 0.293 DC L1
ENSG00000027697 IFNGR1 -20806 sc-eQTL 1.13e-10 -0.354 0.0521 0.288 Mono L1
ENSG00000029363 BCLAF1 908792 sc-eQTL 6.97e-01 0.0192 0.0491 0.288 Mono L1
ENSG00000112357 PEX7 376079 sc-eQTL 5.44e-02 -0.186 0.0959 0.288 Mono L1
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 4.13e-01 0.04 0.0487 0.288 Mono L1
ENSG00000135525 MAP7 647824 sc-eQTL 7.23e-01 -0.0303 0.0853 0.288 Mono L1
ENSG00000197442 MAP3K5 406166 sc-eQTL 8.36e-01 0.0118 0.0569 0.288 Mono L1
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 5.12e-01 0.0397 0.0604 0.288 Mono L1
ENSG00000286646 AL121933.2 414598 sc-eQTL 8.06e-01 0.017 0.0689 0.288 Mono L1
ENSG00000027697 IFNGR1 -20806 sc-eQTL 1.81e-04 -0.236 0.062 0.288 NK L1
ENSG00000029363 BCLAF1 908792 sc-eQTL 7.06e-01 -0.0129 0.034 0.288 NK L1
ENSG00000112357 PEX7 376079 sc-eQTL 8.87e-01 -0.0141 0.099 0.288 NK L1
ENSG00000112378 PERP -908776 sc-eQTL 5.49e-01 0.0374 0.0623 0.288 NK L1
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 9.03e-01 0.00652 0.0534 0.288 NK L1
ENSG00000197442 MAP3K5 406166 sc-eQTL 6.21e-01 0.0378 0.0764 0.288 NK L1
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 3.49e-01 0.0709 0.0755 0.288 NK L1
ENSG00000027697 IFNGR1 -20806 sc-eQTL 2.01e-01 -0.0769 0.0599 0.288 Other_T L1
ENSG00000029363 BCLAF1 908792 sc-eQTL 9.15e-01 -0.00539 0.0504 0.288 Other_T L1
ENSG00000112357 PEX7 376079 sc-eQTL 8.25e-01 0.0217 0.098 0.288 Other_T L1
ENSG00000112378 PERP -908776 sc-eQTL 1.11e-01 -0.125 0.0782 0.288 Other_T L1
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 8.87e-01 -0.00532 0.0374 0.288 Other_T L1
ENSG00000146410 MTFR2 948308 sc-eQTL 7.32e-01 0.0194 0.0566 0.288 Other_T L1
ENSG00000197442 MAP3K5 406166 sc-eQTL 7.17e-01 0.0262 0.0722 0.288 Other_T L1
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 9.75e-01 -0.00233 0.0742 0.288 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -20806 sc-eQTL 2.77e-01 -0.106 0.0974 0.27 B_Activated L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 6.09e-01 0.0406 0.0793 0.27 B_Activated L2
ENSG00000112357 PEX7 376079 sc-eQTL 6.61e-01 -0.0421 0.0961 0.27 B_Activated L2
ENSG00000112378 PERP -908776 sc-eQTL 9.11e-01 0.00559 0.0498 0.27 B_Activated L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 4.39e-01 0.0747 0.0963 0.27 B_Activated L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 4.06e-01 0.0898 0.108 0.27 B_Activated L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 3.88e-01 0.0727 0.0841 0.27 B_Activated L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 1.72e-03 -0.276 0.0869 0.288 B_Intermediate L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 8.26e-01 0.0111 0.0506 0.288 B_Intermediate L2
ENSG00000112357 PEX7 376079 sc-eQTL 4.15e-01 0.0759 0.0929 0.288 B_Intermediate L2
ENSG00000112378 PERP -908776 sc-eQTL 5.17e-01 -0.055 0.0848 0.288 B_Intermediate L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 4.90e-01 0.046 0.0665 0.288 B_Intermediate L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 7.66e-01 0.0239 0.0804 0.288 B_Intermediate L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 1.32e-01 0.142 0.0939 0.288 B_Intermediate L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 9.93e-03 -0.248 0.0953 0.289 B_Memory L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 1.04e-01 0.0934 0.0571 0.289 B_Memory L2
ENSG00000112357 PEX7 376079 sc-eQTL 3.76e-01 0.0866 0.0976 0.289 B_Memory L2
ENSG00000112378 PERP -908776 sc-eQTL 7.18e-01 0.0332 0.092 0.289 B_Memory L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 2.48e-01 0.0732 0.0631 0.289 B_Memory L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 6.39e-01 0.0406 0.0864 0.289 B_Memory L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 2.75e-01 0.103 0.094 0.289 B_Memory L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 2.39e-02 -0.168 0.0737 0.288 B_Naive1 L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 5.30e-01 0.0268 0.0426 0.288 B_Naive1 L2
ENSG00000112357 PEX7 376079 sc-eQTL 6.15e-01 -0.0495 0.0983 0.288 B_Naive1 L2
ENSG00000112378 PERP -908776 sc-eQTL 5.48e-01 -0.0517 0.086 0.288 B_Naive1 L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 1.36e-01 0.0743 0.0496 0.288 B_Naive1 L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 3.22e-01 0.0695 0.07 0.288 B_Naive1 L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 2.67e-01 0.0867 0.078 0.288 B_Naive1 L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 5.51e-01 0.0551 0.0923 0.288 B_Naive2 L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 3.66e-01 0.0485 0.0535 0.288 B_Naive2 L2
ENSG00000112357 PEX7 376079 sc-eQTL 6.49e-02 0.186 0.1 0.288 B_Naive2 L2
ENSG00000112378 PERP -908776 sc-eQTL 3.97e-01 -0.0624 0.0735 0.288 B_Naive2 L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 9.16e-01 0.00782 0.0736 0.288 B_Naive2 L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 5.16e-01 0.0509 0.0783 0.288 B_Naive2 L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 8.79e-01 0.0145 0.0952 0.288 B_Naive2 L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 4.73e-02 -0.177 0.0889 0.284 CD4_CTL L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 5.99e-01 0.0419 0.0796 0.284 CD4_CTL L2
ENSG00000112357 PEX7 376079 sc-eQTL 2.73e-01 -0.109 0.0992 0.284 CD4_CTL L2
ENSG00000112378 PERP -908776 sc-eQTL 5.82e-01 -0.0556 0.101 0.284 CD4_CTL L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 2.59e-01 0.0665 0.0587 0.284 CD4_CTL L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 1.65e-01 0.13 0.0934 0.284 CD4_CTL L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 7.21e-01 0.0327 0.0916 0.284 CD4_CTL L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 3.84e-02 -0.0979 0.047 0.288 CD4_Naive L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 2.85e-01 0.0407 0.038 0.288 CD4_Naive L2
ENSG00000112357 PEX7 376079 sc-eQTL 4.38e-03 -0.253 0.0879 0.288 CD4_Naive L2
ENSG00000112378 PERP -908776 sc-eQTL 8.46e-01 -0.0143 0.0739 0.288 CD4_Naive L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 4.59e-01 0.0384 0.0518 0.288 CD4_Naive L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 6.38e-01 0.018 0.0381 0.288 CD4_Naive L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 8.09e-02 0.117 0.0667 0.288 CD4_Naive L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 3.73e-02 -0.138 0.066 0.288 CD4_TCM L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 3.35e-01 0.0406 0.042 0.288 CD4_TCM L2
ENSG00000112357 PEX7 376079 sc-eQTL 5.55e-01 -0.0578 0.0978 0.288 CD4_TCM L2
ENSG00000112378 PERP -908776 sc-eQTL 7.23e-01 -0.0293 0.0827 0.288 CD4_TCM L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 4.25e-01 0.0383 0.048 0.288 CD4_TCM L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 9.57e-02 -0.091 0.0544 0.288 CD4_TCM L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 5.83e-01 0.037 0.0673 0.288 CD4_TCM L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 2.17e-02 -0.174 0.0753 0.288 CD4_TEM L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 3.60e-01 0.0495 0.054 0.288 CD4_TEM L2
ENSG00000112357 PEX7 376079 sc-eQTL 8.61e-01 -0.0173 0.0984 0.288 CD4_TEM L2
ENSG00000112378 PERP -908776 sc-eQTL 6.88e-01 0.0321 0.0798 0.288 CD4_TEM L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 2.27e-01 0.0612 0.0505 0.288 CD4_TEM L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 6.73e-01 0.033 0.0782 0.288 CD4_TEM L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 8.30e-01 0.0174 0.0812 0.288 CD4_TEM L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 2.17e-05 -0.286 0.0659 0.288 CD8_CTL L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 1.86e-01 0.0605 0.0456 0.288 CD8_CTL L2
ENSG00000112357 PEX7 376079 sc-eQTL 1.39e-01 0.14 0.0941 0.288 CD8_CTL L2
ENSG00000112378 PERP -908776 sc-eQTL 6.08e-01 0.0466 0.0909 0.288 CD8_CTL L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 5.21e-01 0.0371 0.0578 0.288 CD8_CTL L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 3.13e-01 0.0824 0.0814 0.288 CD8_CTL L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 8.76e-01 0.0127 0.0813 0.288 CD8_CTL L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 4.44e-03 -0.194 0.0674 0.288 CD8_Naive L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 2.82e-01 -0.0516 0.0478 0.288 CD8_Naive L2
ENSG00000112357 PEX7 376079 sc-eQTL 8.25e-01 -0.0221 0.0995 0.288 CD8_Naive L2
ENSG00000112378 PERP -908776 sc-eQTL 2.53e-01 -0.0865 0.0754 0.288 CD8_Naive L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 5.82e-01 0.0296 0.0537 0.288 CD8_Naive L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 5.85e-01 0.0348 0.0636 0.288 CD8_Naive L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 4.75e-01 0.0567 0.0793 0.288 CD8_Naive L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 1.35e-01 -0.133 0.0888 0.294 CD8_TCM L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 4.77e-01 0.0477 0.0669 0.294 CD8_TCM L2
ENSG00000112357 PEX7 376079 sc-eQTL 2.27e-01 -0.124 0.102 0.294 CD8_TCM L2
ENSG00000112378 PERP -908776 sc-eQTL 2.50e-01 0.115 0.1 0.294 CD8_TCM L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 7.79e-01 0.0136 0.0484 0.294 CD8_TCM L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 7.94e-01 0.0226 0.0864 0.294 CD8_TCM L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 5.34e-01 0.0551 0.0885 0.294 CD8_TCM L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 1.76e-02 -0.201 0.084 0.288 CD8_TEM L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 4.84e-01 0.0563 0.0803 0.288 CD8_TEM L2
ENSG00000112357 PEX7 376079 sc-eQTL 3.70e-01 -0.088 0.0979 0.288 CD8_TEM L2
ENSG00000112378 PERP -908776 sc-eQTL 3.04e-01 -0.105 0.102 0.288 CD8_TEM L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 6.72e-01 -0.0266 0.0628 0.288 CD8_TEM L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 4.88e-01 0.0675 0.0971 0.288 CD8_TEM L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 4.12e-01 0.0766 0.0931 0.288 CD8_TEM L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 2.26e-01 -0.085 0.07 0.29 MAIT L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 5.76e-01 0.0327 0.0584 0.29 MAIT L2
ENSG00000112357 PEX7 376079 sc-eQTL 6.35e-01 0.0453 0.0953 0.29 MAIT L2
ENSG00000112378 PERP -908776 sc-eQTL 9.22e-02 -0.167 0.0987 0.29 MAIT L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 9.19e-01 -0.00483 0.0473 0.29 MAIT L2
ENSG00000146410 MTFR2 948308 sc-eQTL 1.38e-01 0.117 0.0784 0.29 MAIT L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 1.26e-01 0.126 0.0819 0.29 MAIT L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 6.61e-01 0.0384 0.0874 0.29 MAIT L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 2.91e-02 -0.164 0.0747 0.296 NK_CD56bright L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 7.02e-01 0.0214 0.0558 0.296 NK_CD56bright L2
ENSG00000112357 PEX7 376079 sc-eQTL 1.64e-01 0.137 0.0981 0.296 NK_CD56bright L2
ENSG00000112378 PERP -908776 sc-eQTL 7.97e-01 -0.0228 0.0883 0.296 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 9.88e-01 -0.000821 0.0563 0.296 NK_CD56bright L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 3.33e-01 0.083 0.0855 0.296 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 5.78e-02 0.17 0.089 0.296 NK_CD56bright L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 2.88e-05 -0.243 0.0567 0.289 NK_CD56dim L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 4.52e-02 -0.0771 0.0383 0.289 NK_CD56dim L2
ENSG00000112357 PEX7 376079 sc-eQTL 7.66e-01 -0.0304 0.102 0.289 NK_CD56dim L2
ENSG00000112378 PERP -908776 sc-eQTL 3.93e-01 0.0612 0.0715 0.289 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 7.32e-01 -0.0191 0.0557 0.289 NK_CD56dim L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 8.23e-01 0.018 0.0802 0.289 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 7.75e-01 -0.0239 0.0834 0.289 NK_CD56dim L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 7.42e-05 -0.297 0.0734 0.297 NK_HLA L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 5.20e-01 0.0417 0.0647 0.297 NK_HLA L2
ENSG00000112357 PEX7 376079 sc-eQTL 1.52e-01 -0.139 0.0966 0.297 NK_HLA L2
ENSG00000112378 PERP -908776 sc-eQTL 1.03e-01 -0.128 0.0782 0.297 NK_HLA L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 2.65e-01 -0.0675 0.0604 0.297 NK_HLA L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 4.34e-01 0.0753 0.0961 0.297 NK_HLA L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 9.83e-01 -0.00209 0.0976 0.297 NK_HLA L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 6.09e-05 -0.247 0.0603 0.289 NK_cytokine L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 7.76e-01 0.0133 0.0467 0.289 NK_cytokine L2
ENSG00000112357 PEX7 376079 sc-eQTL 7.66e-01 0.0293 0.0983 0.289 NK_cytokine L2
ENSG00000112378 PERP -908776 sc-eQTL 7.11e-01 0.0277 0.0746 0.289 NK_cytokine L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 9.06e-01 -0.00658 0.0559 0.289 NK_cytokine L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 1.54e-01 0.109 0.0765 0.289 NK_cytokine L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 2.44e-01 0.0983 0.084 0.289 NK_cytokine L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 3.90e-01 -0.0999 0.116 0.27 PB L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 7.58e-01 -0.0309 0.1 0.27 PB L2
ENSG00000112357 PEX7 376079 sc-eQTL 4.31e-02 -0.24 0.117 0.27 PB L2
ENSG00000112378 PERP -908776 sc-eQTL 5.85e-01 -0.0407 0.0743 0.27 PB L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 2.43e-01 0.105 0.0897 0.27 PB L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 7.68e-01 -0.0303 0.103 0.27 PB L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 4.52e-01 -0.0816 0.108 0.27 PB L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 7.90e-01 -0.0208 0.078 0.293 Pro_T L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 2.04e-01 0.103 0.0806 0.293 Pro_T L2
ENSG00000112357 PEX7 376079 sc-eQTL 7.20e-01 -0.034 0.0948 0.293 Pro_T L2
ENSG00000112378 PERP -908776 sc-eQTL 2.18e-01 0.0928 0.0751 0.293 Pro_T L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 7.92e-01 0.0125 0.0475 0.293 Pro_T L2
ENSG00000146410 MTFR2 948308 sc-eQTL 7.89e-01 -0.0176 0.0659 0.293 Pro_T L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 1.90e-01 0.121 0.0917 0.293 Pro_T L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 4.35e-02 -0.186 0.0914 0.293 Pro_T L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 4.33e-01 -0.0701 0.0891 0.288 Treg L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 1.51e-01 0.0827 0.0574 0.288 Treg L2
ENSG00000112357 PEX7 376079 sc-eQTL 3.46e-02 -0.198 0.0933 0.288 Treg L2
ENSG00000112378 PERP -908776 sc-eQTL 5.04e-01 -0.0681 0.102 0.288 Treg L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 9.14e-01 0.00616 0.0567 0.288 Treg L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 7.64e-01 0.0185 0.0615 0.288 Treg L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 3.58e-01 0.0795 0.0864 0.288 Treg L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 8.12e-01 -0.019 0.0796 0.285 cDC L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 9.04e-01 -0.00974 0.0803 0.285 cDC L2
ENSG00000112357 PEX7 376079 sc-eQTL 3.13e-01 0.104 0.103 0.285 cDC L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 9.32e-01 -0.00671 0.0785 0.285 cDC L2
ENSG00000135525 MAP7 647824 sc-eQTL 4.66e-01 -0.067 0.0917 0.285 cDC L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 2.29e-01 -0.0971 0.0805 0.285 cDC L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 5.60e-02 -0.195 0.101 0.285 cDC L2
ENSG00000286646 AL121933.2 414598 sc-eQTL 9.82e-02 0.174 0.104 0.285 cDC L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 3.62e-10 -0.325 0.0494 0.288 cMono_IL1B L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 9.71e-01 0.0021 0.0582 0.288 cMono_IL1B L2
ENSG00000112357 PEX7 376079 sc-eQTL 1.85e-02 -0.229 0.0963 0.288 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 4.70e-01 0.0422 0.0584 0.288 cMono_IL1B L2
ENSG00000135525 MAP7 647824 sc-eQTL 2.41e-01 0.0987 0.0838 0.288 cMono_IL1B L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 3.07e-01 -0.062 0.0606 0.288 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 2.07e-01 0.0786 0.0622 0.288 cMono_IL1B L2
ENSG00000286646 AL121933.2 414598 sc-eQTL 5.71e-01 -0.0443 0.078 0.288 cMono_IL1B L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 5.15e-06 -0.278 0.0595 0.288 cMono_S100A L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 6.91e-01 -0.0255 0.0642 0.288 cMono_S100A L2
ENSG00000112357 PEX7 376079 sc-eQTL 7.65e-01 -0.03 0.1 0.288 cMono_S100A L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 7.16e-01 0.0202 0.0555 0.288 cMono_S100A L2
ENSG00000135525 MAP7 647824 sc-eQTL 2.25e-01 -0.113 0.0932 0.288 cMono_S100A L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 1.13e-01 0.12 0.075 0.288 cMono_S100A L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 6.31e-01 0.0383 0.0797 0.288 cMono_S100A L2
ENSG00000286646 AL121933.2 414598 sc-eQTL 4.19e-01 0.063 0.0777 0.288 cMono_S100A L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 1.86e-02 -0.217 0.0913 0.309 gdT L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 3.17e-01 -0.082 0.0817 0.309 gdT L2
ENSG00000112357 PEX7 376079 sc-eQTL 1.52e-01 -0.169 0.117 0.309 gdT L2
ENSG00000112378 PERP -908776 sc-eQTL 9.30e-03 -0.265 0.101 0.309 gdT L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 7.51e-01 0.0182 0.0572 0.309 gdT L2
ENSG00000146410 MTFR2 948308 sc-eQTL 6.89e-01 -0.0362 0.0903 0.309 gdT L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 9.93e-01 0.000993 0.121 0.309 gdT L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 5.37e-01 0.0642 0.104 0.309 gdT L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 7.13e-05 -0.263 0.0649 0.291 intMono L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 9.23e-01 -0.00858 0.0891 0.291 intMono L2
ENSG00000112357 PEX7 376079 sc-eQTL 3.87e-01 -0.0788 0.0908 0.291 intMono L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 6.56e-01 0.0259 0.0582 0.291 intMono L2
ENSG00000135525 MAP7 647824 sc-eQTL 3.97e-02 0.183 0.0886 0.291 intMono L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 8.53e-02 0.163 0.0941 0.291 intMono L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 4.80e-01 -0.0614 0.0867 0.291 intMono L2
ENSG00000286646 AL121933.2 414598 sc-eQTL 4.95e-01 0.0684 0.1 0.291 intMono L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 2.77e-06 -0.351 0.0727 0.29 ncMono L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 9.33e-01 -0.00503 0.0597 0.29 ncMono L2
ENSG00000112357 PEX7 376079 sc-eQTL 7.25e-01 -0.0336 0.0952 0.29 ncMono L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 7.24e-01 -0.0241 0.068 0.29 ncMono L2
ENSG00000135525 MAP7 647824 sc-eQTL 7.29e-01 0.0291 0.0841 0.29 ncMono L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 3.46e-01 0.0833 0.0882 0.29 ncMono L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 6.16e-01 -0.0428 0.085 0.29 ncMono L2
ENSG00000286646 AL121933.2 414598 sc-eQTL 3.47e-01 0.0845 0.0895 0.29 ncMono L2
ENSG00000027697 IFNGR1 -20806 sc-eQTL 8.04e-01 0.0224 0.0902 0.305 pDC L2
ENSG00000029363 BCLAF1 908792 sc-eQTL 4.44e-02 0.135 0.0668 0.305 pDC L2
ENSG00000112357 PEX7 376079 sc-eQTL 7.83e-01 0.0273 0.0993 0.305 pDC L2
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 6.52e-01 -0.0377 0.0836 0.305 pDC L2
ENSG00000135525 MAP7 647824 sc-eQTL 3.77e-01 -0.0613 0.0692 0.305 pDC L2
ENSG00000197442 MAP3K5 406166 sc-eQTL 7.18e-01 -0.0401 0.111 0.305 pDC L2
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 5.93e-01 0.0454 0.0848 0.305 pDC L2
ENSG00000286646 AL121933.2 414598 sc-eQTL 1.44e-01 -0.149 0.102 0.305 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -20806 sc-eQTL 1.35e-04 -0.293 0.0753 0.288 B_Memory LOneK1K
ENSG00000029363 BCLAF1 908792 sc-eQTL 2.11e-01 0.0547 0.0436 0.288 B_Memory LOneK1K
ENSG00000112357 PEX7 376079 sc-eQTL 7.42e-02 0.16 0.089 0.288 B_Memory LOneK1K
ENSG00000112378 PERP -908776 sc-eQTL 9.76e-01 0.00249 0.0833 0.288 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 4.03e-01 0.046 0.0549 0.288 B_Memory LOneK1K
ENSG00000197442 MAP3K5 406166 sc-eQTL 5.79e-01 0.0405 0.0727 0.288 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 6.88e-02 0.169 0.0923 0.288 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -20806 sc-eQTL 1.25e-01 -0.122 0.0793 0.288 B_Naive LOneK1K
ENSG00000029363 BCLAF1 908792 sc-eQTL 4.23e-01 0.0294 0.0366 0.288 B_Naive LOneK1K
ENSG00000112357 PEX7 376079 sc-eQTL 2.87e-01 0.103 0.0968 0.288 B_Naive LOneK1K
ENSG00000112378 PERP -908776 sc-eQTL 2.52e-01 -0.0995 0.0866 0.288 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 3.26e-01 0.0449 0.0456 0.288 B_Naive LOneK1K
ENSG00000197442 MAP3K5 406166 sc-eQTL 4.73e-01 0.048 0.0669 0.288 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 5.78e-01 0.0452 0.0813 0.288 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -20806 sc-eQTL 3.42e-10 -0.325 0.0493 0.288 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 908792 sc-eQTL 9.44e-01 0.00356 0.0503 0.288 CD14_Mono LOneK1K
ENSG00000112357 PEX7 376079 sc-eQTL 3.12e-02 -0.208 0.096 0.288 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 3.00e-01 0.0519 0.0499 0.288 CD14_Mono LOneK1K
ENSG00000135525 MAP7 647824 sc-eQTL 5.55e-01 -0.0512 0.0867 0.288 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 406166 sc-eQTL 8.34e-01 -0.0123 0.0586 0.288 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 2.92e-01 0.0632 0.0598 0.288 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 414598 sc-eQTL 7.46e-01 0.0226 0.0697 0.288 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -20806 sc-eQTL 3.32e-08 -0.342 0.0595 0.289 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 908792 sc-eQTL 9.68e-01 0.00232 0.0579 0.289 CD16_Mono LOneK1K
ENSG00000112357 PEX7 376079 sc-eQTL 9.48e-01 -0.00629 0.0966 0.289 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 6.86e-01 0.0242 0.0598 0.289 CD16_Mono LOneK1K
ENSG00000135525 MAP7 647824 sc-eQTL 3.42e-01 0.0888 0.0932 0.289 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 406166 sc-eQTL 5.22e-01 0.0492 0.0766 0.289 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 2.20e-01 -0.0984 0.0799 0.289 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 414598 sc-eQTL 4.38e-01 0.0707 0.0909 0.289 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -20806 sc-eQTL 3.06e-05 -0.248 0.0581 0.289 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 908792 sc-eQTL 6.13e-01 -0.0178 0.0351 0.289 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 376079 sc-eQTL 6.65e-01 -0.0443 0.102 0.289 NK_CD56dim LOneK1K
ENSG00000112378 PERP -908776 sc-eQTL 4.94e-01 0.0434 0.0633 0.289 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -668571 sc-eQTL 9.90e-01 0.00066 0.0552 0.289 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 406166 sc-eQTL 6.15e-01 0.0376 0.0745 0.289 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -669590 sc-eQTL 3.00e-01 0.0801 0.077 0.289 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -20806 pQTL 1e-15 -0.138 0.017 0.0 0.0 0.284
ENSG00000027697 IFNGR1 -20806 eQTL 1.23e-53 -0.214 0.013 0.0 0.0 0.279

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -20806 3.69e-05 3.29e-05 6.31e-06 1.55e-05 5.91e-06 1.41e-05 4.51e-05 4.55e-06 3.08e-05 1.54e-05 3.73e-05 1.74e-05 4.7e-05 1.38e-05 7.05e-06 1.9e-05 1.8e-05 2.56e-05 7.83e-06 6.6e-06 1.49e-05 3.34e-05 3.2e-05 8.8e-06 4.44e-05 8.09e-06 1.41e-05 1.28e-05 3.23e-05 2.45e-05 1.98e-05 1.64e-06 2.6e-06 7.07e-06 1.15e-05 5.77e-06 3.09e-06 3.16e-06 4.84e-06 3.24e-06 1.77e-06 3.71e-05 3.64e-06 3.62e-07 2.49e-06 3.86e-06 4.07e-06 1.58e-06 1.52e-06