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Genes within 1Mb (chr6:137196354:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -23095 sc-eQTL 3.36e-03 -0.206 0.0693 0.423 B L1
ENSG00000029363 BCLAF1 906503 sc-eQTL 4.20e-01 0.0254 0.0314 0.423 B L1
ENSG00000112357 PEX7 373790 sc-eQTL 3.00e-01 0.0868 0.0835 0.423 B L1
ENSG00000112378 PERP -911065 sc-eQTL 6.00e-01 -0.0291 0.0554 0.423 B L1
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 1.58e-01 0.063 0.0444 0.423 B L1
ENSG00000197442 MAP3K5 403877 sc-eQTL 3.83e-01 0.0543 0.0621 0.423 B L1
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 6.52e-01 0.0317 0.0702 0.423 B L1
ENSG00000027697 IFNGR1 -23095 sc-eQTL 4.17e-06 -0.211 0.0446 0.423 CD4T L1
ENSG00000029363 BCLAF1 906503 sc-eQTL 4.89e-01 0.0245 0.0354 0.423 CD4T L1
ENSG00000112357 PEX7 373790 sc-eQTL 1.38e-01 -0.112 0.0751 0.423 CD4T L1
ENSG00000112378 PERP -911065 sc-eQTL 9.19e-01 -0.00514 0.0507 0.423 CD4T L1
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 2.55e-01 0.0541 0.0474 0.423 CD4T L1
ENSG00000197442 MAP3K5 403877 sc-eQTL 4.04e-01 -0.0302 0.0361 0.423 CD4T L1
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 2.63e-01 0.067 0.0596 0.423 CD4T L1
ENSG00000027697 IFNGR1 -23095 sc-eQTL 3.81e-05 -0.215 0.0511 0.423 CD8T L1
ENSG00000029363 BCLAF1 906503 sc-eQTL 2.97e-01 0.0375 0.0359 0.423 CD8T L1
ENSG00000112357 PEX7 373790 sc-eQTL 3.23e-01 0.0876 0.0885 0.423 CD8T L1
ENSG00000112378 PERP -911065 sc-eQTL 4.43e-01 0.0445 0.0579 0.423 CD8T L1
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 6.46e-01 0.0206 0.0448 0.423 CD8T L1
ENSG00000197442 MAP3K5 403877 sc-eQTL 9.68e-01 -0.00192 0.0473 0.423 CD8T L1
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 8.52e-01 -0.0122 0.0657 0.423 CD8T L1
ENSG00000027697 IFNGR1 -23095 sc-eQTL 2.53e-02 -0.147 0.0651 0.428 DC L1
ENSG00000029363 BCLAF1 906503 sc-eQTL 1.91e-01 0.0776 0.0591 0.428 DC L1
ENSG00000112357 PEX7 373790 sc-eQTL 7.49e-02 0.165 0.0922 0.428 DC L1
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 2.43e-01 -0.0823 0.0703 0.428 DC L1
ENSG00000135525 MAP7 645535 sc-eQTL 1.71e-01 -0.104 0.076 0.428 DC L1
ENSG00000197442 MAP3K5 403877 sc-eQTL 5.06e-01 -0.0486 0.0731 0.428 DC L1
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 7.95e-01 -0.0187 0.0718 0.428 DC L1
ENSG00000286646 AL121933.2 412309 sc-eQTL 2.54e-01 0.109 0.0952 0.428 DC L1
ENSG00000027697 IFNGR1 -23095 sc-eQTL 2.18e-15 -0.401 0.0468 0.423 Mono L1
ENSG00000029363 BCLAF1 906503 sc-eQTL 7.47e-01 -0.015 0.0464 0.423 Mono L1
ENSG00000112357 PEX7 373790 sc-eQTL 4.67e-02 -0.181 0.0905 0.423 Mono L1
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 7.98e-01 -0.0118 0.0461 0.423 Mono L1
ENSG00000135525 MAP7 645535 sc-eQTL 3.56e-01 -0.0744 0.0805 0.423 Mono L1
ENSG00000197442 MAP3K5 403877 sc-eQTL 9.65e-01 0.00234 0.0538 0.423 Mono L1
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 6.43e-01 -0.0265 0.0571 0.423 Mono L1
ENSG00000286646 AL121933.2 412309 sc-eQTL 9.54e-01 0.00377 0.0651 0.423 Mono L1
ENSG00000027697 IFNGR1 -23095 sc-eQTL 4.68e-05 -0.238 0.0572 0.423 NK L1
ENSG00000029363 BCLAF1 906503 sc-eQTL 4.79e-01 -0.0224 0.0316 0.423 NK L1
ENSG00000112357 PEX7 373790 sc-eQTL 6.64e-01 0.0399 0.0918 0.423 NK L1
ENSG00000112378 PERP -911065 sc-eQTL 9.89e-01 -0.000808 0.0579 0.423 NK L1
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 6.63e-01 0.0216 0.0495 0.423 NK L1
ENSG00000197442 MAP3K5 403877 sc-eQTL 5.61e-01 0.0413 0.0709 0.423 NK L1
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 2.29e-01 0.0844 0.07 0.423 NK L1
ENSG00000027697 IFNGR1 -23095 sc-eQTL 3.12e-02 -0.122 0.0562 0.423 Other_T L1
ENSG00000029363 BCLAF1 906503 sc-eQTL 6.54e-01 -0.0214 0.0476 0.423 Other_T L1
ENSG00000112357 PEX7 373790 sc-eQTL 9.69e-01 0.00359 0.0926 0.423 Other_T L1
ENSG00000112378 PERP -911065 sc-eQTL 2.59e-01 -0.0838 0.0741 0.423 Other_T L1
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 9.82e-01 0.00078 0.0354 0.423 Other_T L1
ENSG00000146410 MTFR2 946019 sc-eQTL 5.03e-01 -0.0359 0.0535 0.423 Other_T L1
ENSG00000197442 MAP3K5 403877 sc-eQTL 6.07e-01 0.0351 0.0682 0.423 Other_T L1
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 7.89e-01 0.0188 0.0702 0.423 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -23095 sc-eQTL 3.78e-02 -0.188 0.0898 0.418 B_Activated L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 1.69e-01 -0.101 0.0734 0.418 B_Activated L2
ENSG00000112357 PEX7 373790 sc-eQTL 9.75e-01 -0.00279 0.0894 0.418 B_Activated L2
ENSG00000112378 PERP -911065 sc-eQTL 9.61e-01 0.00224 0.0463 0.418 B_Activated L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 1.15e-01 0.141 0.0891 0.418 B_Activated L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 1.56e-01 0.142 0.0999 0.418 B_Activated L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 1.67e-01 0.108 0.0779 0.418 B_Activated L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 5.60e-03 -0.229 0.0819 0.421 B_Intermediate L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 6.68e-01 0.0204 0.0474 0.421 B_Intermediate L2
ENSG00000112357 PEX7 373790 sc-eQTL 1.47e-01 0.127 0.0869 0.421 B_Intermediate L2
ENSG00000112378 PERP -911065 sc-eQTL 1.03e-01 -0.129 0.0791 0.421 B_Intermediate L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 3.91e-01 0.0536 0.0623 0.421 B_Intermediate L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 8.75e-01 0.0119 0.0755 0.421 B_Intermediate L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 2.94e-01 0.0929 0.0884 0.421 B_Intermediate L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 2.27e-03 -0.274 0.0885 0.422 B_Memory L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 3.99e-01 -0.0454 0.0537 0.422 B_Memory L2
ENSG00000112357 PEX7 373790 sc-eQTL 3.54e-01 0.0848 0.0912 0.422 B_Memory L2
ENSG00000112378 PERP -911065 sc-eQTL 6.64e-01 0.0374 0.086 0.422 B_Memory L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 2.83e-01 0.0636 0.059 0.422 B_Memory L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 5.83e-01 0.0445 0.0808 0.422 B_Memory L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 9.18e-01 0.00907 0.0881 0.422 B_Memory L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 6.53e-03 -0.193 0.0701 0.423 B_Naive1 L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 6.66e-01 0.0176 0.0407 0.423 B_Naive1 L2
ENSG00000112357 PEX7 373790 sc-eQTL 5.82e-01 -0.0518 0.0941 0.423 B_Naive1 L2
ENSG00000112378 PERP -911065 sc-eQTL 8.71e-01 -0.0134 0.0823 0.423 B_Naive1 L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 1.43e-01 0.0698 0.0475 0.423 B_Naive1 L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 9.29e-02 0.112 0.0666 0.423 B_Naive1 L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 2.85e-01 0.0799 0.0746 0.423 B_Naive1 L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 8.70e-01 -0.0143 0.0872 0.423 B_Naive2 L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 5.82e-01 0.0278 0.0505 0.423 B_Naive2 L2
ENSG00000112357 PEX7 373790 sc-eQTL 1.35e-01 0.142 0.0949 0.423 B_Naive2 L2
ENSG00000112378 PERP -911065 sc-eQTL 4.73e-01 -0.05 0.0694 0.423 B_Naive2 L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 6.61e-01 0.0305 0.0694 0.423 B_Naive2 L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 6.76e-01 -0.0309 0.0739 0.423 B_Naive2 L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 5.69e-01 -0.0512 0.0898 0.423 B_Naive2 L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 1.03e-02 -0.212 0.0819 0.42 CD4_CTL L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 1.84e-01 0.0981 0.0736 0.42 CD4_CTL L2
ENSG00000112357 PEX7 373790 sc-eQTL 1.60e-01 -0.129 0.0919 0.42 CD4_CTL L2
ENSG00000112378 PERP -911065 sc-eQTL 3.80e-01 -0.0823 0.0934 0.42 CD4_CTL L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 8.63e-02 0.0934 0.0542 0.42 CD4_CTL L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 8.75e-01 0.0137 0.0871 0.42 CD4_CTL L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 8.13e-01 -0.0201 0.085 0.42 CD4_CTL L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 1.69e-04 -0.166 0.0432 0.423 CD4_Naive L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 9.68e-01 0.00146 0.0359 0.423 CD4_Naive L2
ENSG00000112357 PEX7 373790 sc-eQTL 3.48e-01 -0.0792 0.0842 0.423 CD4_Naive L2
ENSG00000112378 PERP -911065 sc-eQTL 8.97e-01 -0.00899 0.0697 0.423 CD4_Naive L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 4.35e-01 0.0381 0.0488 0.423 CD4_Naive L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 8.11e-01 -0.0086 0.0359 0.423 CD4_Naive L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 1.56e-01 0.0896 0.063 0.423 CD4_Naive L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 4.60e-02 -0.123 0.0613 0.423 CD4_TCM L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 4.54e-01 0.0293 0.039 0.423 CD4_TCM L2
ENSG00000112357 PEX7 373790 sc-eQTL 3.32e-01 -0.0882 0.0907 0.423 CD4_TCM L2
ENSG00000112378 PERP -911065 sc-eQTL 8.45e-01 0.015 0.0768 0.423 CD4_TCM L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 3.73e-01 0.0397 0.0445 0.423 CD4_TCM L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 1.11e-01 -0.0808 0.0505 0.423 CD4_TCM L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 7.75e-01 -0.0179 0.0625 0.423 CD4_TCM L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 1.64e-04 -0.262 0.0682 0.423 CD4_TEM L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 4.55e-01 0.0374 0.05 0.423 CD4_TEM L2
ENSG00000112357 PEX7 373790 sc-eQTL 9.92e-01 0.00087 0.0911 0.423 CD4_TEM L2
ENSG00000112378 PERP -911065 sc-eQTL 7.56e-01 -0.0229 0.0738 0.423 CD4_TEM L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 3.30e-01 0.0457 0.0468 0.423 CD4_TEM L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 8.53e-01 -0.0134 0.0724 0.423 CD4_TEM L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 4.96e-01 -0.0512 0.0751 0.423 CD4_TEM L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 1.65e-03 -0.199 0.0626 0.423 CD8_CTL L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 2.76e-01 0.0465 0.0426 0.423 CD8_CTL L2
ENSG00000112357 PEX7 373790 sc-eQTL 7.76e-02 0.155 0.0875 0.423 CD8_CTL L2
ENSG00000112378 PERP -911065 sc-eQTL 3.24e-01 0.0836 0.0845 0.423 CD8_CTL L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 6.65e-01 0.0234 0.0539 0.423 CD8_CTL L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 6.72e-01 0.0323 0.076 0.423 CD8_CTL L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 8.03e-01 -0.0189 0.0758 0.423 CD8_CTL L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 4.35e-05 -0.255 0.061 0.423 CD8_Naive L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 6.31e-01 -0.0213 0.0443 0.423 CD8_Naive L2
ENSG00000112357 PEX7 373790 sc-eQTL 8.59e-01 -0.0163 0.092 0.423 CD8_Naive L2
ENSG00000112378 PERP -911065 sc-eQTL 2.97e-01 -0.0729 0.0697 0.423 CD8_Naive L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 5.06e-01 0.033 0.0496 0.423 CD8_Naive L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 4.06e-01 0.0489 0.0587 0.423 CD8_Naive L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 7.00e-01 -0.0283 0.0734 0.423 CD8_Naive L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 9.24e-02 -0.143 0.0846 0.424 CD8_TCM L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 2.94e-01 0.0671 0.0638 0.424 CD8_TCM L2
ENSG00000112357 PEX7 373790 sc-eQTL 2.04e-01 -0.124 0.0974 0.424 CD8_TCM L2
ENSG00000112378 PERP -911065 sc-eQTL 1.03e-01 0.156 0.0952 0.424 CD8_TCM L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 3.69e-01 0.0415 0.0461 0.424 CD8_TCM L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 9.35e-01 0.00672 0.0825 0.424 CD8_TCM L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 7.26e-01 -0.0297 0.0845 0.424 CD8_TCM L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 8.41e-03 -0.215 0.0808 0.425 CD8_TEM L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 3.05e-01 0.0795 0.0774 0.425 CD8_TEM L2
ENSG00000112357 PEX7 373790 sc-eQTL 9.14e-01 0.0102 0.0947 0.425 CD8_TEM L2
ENSG00000112378 PERP -911065 sc-eQTL 1.23e-01 -0.151 0.0979 0.425 CD8_TEM L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 8.59e-01 0.0108 0.0607 0.425 CD8_TEM L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 2.65e-01 0.104 0.0935 0.425 CD8_TEM L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 2.33e-01 0.107 0.0897 0.425 CD8_TEM L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 1.82e-02 -0.153 0.0641 0.426 MAIT L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 4.17e-01 -0.0438 0.0539 0.426 MAIT L2
ENSG00000112357 PEX7 373790 sc-eQTL 8.20e-01 -0.02 0.088 0.426 MAIT L2
ENSG00000112378 PERP -911065 sc-eQTL 2.72e-01 -0.101 0.0915 0.426 MAIT L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 9.57e-01 0.00233 0.0437 0.426 MAIT L2
ENSG00000146410 MTFR2 946019 sc-eQTL 4.33e-01 0.0571 0.0727 0.426 MAIT L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 3.45e-01 0.0719 0.0759 0.426 MAIT L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 5.02e-01 0.0543 0.0807 0.426 MAIT L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 3.04e-02 -0.152 0.0698 0.429 NK_CD56bright L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 6.88e-01 0.0209 0.0521 0.429 NK_CD56bright L2
ENSG00000112357 PEX7 373790 sc-eQTL 1.91e-01 0.12 0.0916 0.429 NK_CD56bright L2
ENSG00000112378 PERP -911065 sc-eQTL 3.49e-01 -0.0773 0.0823 0.429 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 6.59e-01 0.0232 0.0525 0.429 NK_CD56bright L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 8.34e-01 0.0168 0.0799 0.429 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 7.17e-02 0.151 0.0831 0.429 NK_CD56bright L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 5.09e-06 -0.245 0.0523 0.425 NK_CD56dim L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 2.01e-01 -0.0459 0.0358 0.425 NK_CD56dim L2
ENSG00000112357 PEX7 373790 sc-eQTL 6.92e-01 -0.0375 0.0946 0.425 NK_CD56dim L2
ENSG00000112378 PERP -911065 sc-eQTL 8.51e-01 0.0125 0.0665 0.425 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 8.78e-01 0.00799 0.0517 0.425 NK_CD56dim L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 9.38e-01 -0.00576 0.0745 0.425 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 6.67e-01 -0.0334 0.0775 0.425 NK_CD56dim L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 3.30e-04 -0.25 0.0683 0.434 NK_HLA L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 8.91e-01 -0.0082 0.0598 0.434 NK_HLA L2
ENSG00000112357 PEX7 373790 sc-eQTL 4.96e-01 -0.0611 0.0895 0.434 NK_HLA L2
ENSG00000112378 PERP -911065 sc-eQTL 5.63e-01 -0.0421 0.0727 0.434 NK_HLA L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 4.55e-01 -0.0418 0.0559 0.434 NK_HLA L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 2.04e-01 0.113 0.0885 0.434 NK_HLA L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 5.78e-01 0.0501 0.0901 0.434 NK_HLA L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 1.16e-05 -0.25 0.0556 0.425 NK_cytokine L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 3.51e-01 -0.0405 0.0433 0.425 NK_cytokine L2
ENSG00000112357 PEX7 373790 sc-eQTL 4.47e-01 0.0695 0.0912 0.425 NK_cytokine L2
ENSG00000112378 PERP -911065 sc-eQTL 8.31e-01 0.0148 0.0693 0.425 NK_cytokine L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 8.17e-01 0.012 0.0519 0.425 NK_cytokine L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 1.36e-01 0.106 0.071 0.425 NK_cytokine L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 7.62e-02 0.138 0.0777 0.425 NK_cytokine L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 4.43e-01 -0.086 0.112 0.419 PB L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 8.00e-01 0.0245 0.0966 0.419 PB L2
ENSG00000112357 PEX7 373790 sc-eQTL 7.46e-01 -0.0374 0.115 0.419 PB L2
ENSG00000112378 PERP -911065 sc-eQTL 4.03e-01 -0.0601 0.0716 0.419 PB L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 6.71e-01 -0.037 0.087 0.419 PB L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 2.00e-01 -0.127 0.0984 0.419 PB L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 1.92e-01 -0.136 0.104 0.419 PB L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 9.56e-01 0.00401 0.073 0.426 Pro_T L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 5.42e-01 0.0462 0.0756 0.426 Pro_T L2
ENSG00000112357 PEX7 373790 sc-eQTL 7.55e-01 -0.0277 0.0886 0.426 Pro_T L2
ENSG00000112378 PERP -911065 sc-eQTL 4.69e-01 0.051 0.0704 0.426 Pro_T L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 1.62e-01 0.0621 0.0442 0.426 Pro_T L2
ENSG00000146410 MTFR2 946019 sc-eQTL 5.97e-01 -0.0326 0.0616 0.426 Pro_T L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 1.52e-02 0.208 0.0848 0.426 Pro_T L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 5.42e-01 -0.0526 0.0862 0.426 Pro_T L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 1.48e-02 -0.204 0.083 0.423 Treg L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 5.99e-01 0.0286 0.0543 0.423 Treg L2
ENSG00000112357 PEX7 373790 sc-eQTL 1.29e-02 -0.22 0.0876 0.423 Treg L2
ENSG00000112378 PERP -911065 sc-eQTL 2.55e-01 -0.109 0.0958 0.423 Treg L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 8.22e-01 -0.012 0.0535 0.423 Treg L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 9.48e-01 -0.00381 0.058 0.423 Treg L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 5.94e-01 0.0435 0.0815 0.423 Treg L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 4.13e-03 -0.211 0.0726 0.424 cDC L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 5.82e-01 -0.0413 0.0748 0.424 cDC L2
ENSG00000112357 PEX7 373790 sc-eQTL 9.20e-02 0.161 0.0953 0.424 cDC L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 8.01e-01 0.0185 0.0732 0.424 cDC L2
ENSG00000135525 MAP7 645535 sc-eQTL 1.45e-01 -0.124 0.0851 0.424 cDC L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 8.76e-01 0.0118 0.0753 0.424 cDC L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 2.43e-01 -0.111 0.095 0.424 cDC L2
ENSG00000286646 AL121933.2 412309 sc-eQTL 5.25e-02 0.189 0.0971 0.424 cDC L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 1.84e-15 -0.379 0.044 0.423 cMono_IL1B L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 7.18e-01 -0.0199 0.0549 0.423 cMono_IL1B L2
ENSG00000112357 PEX7 373790 sc-eQTL 1.51e-02 -0.222 0.0908 0.423 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 8.76e-01 0.00864 0.0551 0.423 cMono_IL1B L2
ENSG00000135525 MAP7 645535 sc-eQTL 9.37e-01 -0.00627 0.0793 0.423 cMono_IL1B L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 2.40e-01 -0.0672 0.0571 0.423 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 6.81e-01 0.0242 0.0588 0.423 cMono_IL1B L2
ENSG00000286646 AL121933.2 412309 sc-eQTL 8.59e-01 -0.0131 0.0736 0.423 cMono_IL1B L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 6.68e-07 -0.287 0.0561 0.423 cMono_S100A L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 1.68e-01 -0.0842 0.0608 0.423 cMono_S100A L2
ENSG00000112357 PEX7 373790 sc-eQTL 5.35e-01 -0.0593 0.0953 0.423 cMono_S100A L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 9.89e-01 0.000701 0.0529 0.423 cMono_S100A L2
ENSG00000135525 MAP7 645535 sc-eQTL 2.34e-01 -0.106 0.0887 0.423 cMono_S100A L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 1.16e-01 0.113 0.0714 0.423 cMono_S100A L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 7.98e-01 -0.0195 0.0759 0.423 cMono_S100A L2
ENSG00000286646 AL121933.2 412309 sc-eQTL 3.33e-01 0.0718 0.0739 0.423 cMono_S100A L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 1.35e-02 -0.22 0.0878 0.439 gdT L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 5.89e-01 -0.0427 0.0789 0.439 gdT L2
ENSG00000112357 PEX7 373790 sc-eQTL 5.25e-01 -0.0724 0.114 0.439 gdT L2
ENSG00000112378 PERP -911065 sc-eQTL 1.04e-03 -0.32 0.0956 0.439 gdT L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 9.32e-01 0.00471 0.0552 0.439 gdT L2
ENSG00000146410 MTFR2 946019 sc-eQTL 7.53e-02 -0.154 0.0861 0.439 gdT L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 6.81e-01 0.048 0.117 0.439 gdT L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 7.67e-01 0.0297 0.1 0.439 gdT L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 1.05e-04 -0.242 0.0612 0.424 intMono L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 6.06e-01 -0.0433 0.0839 0.424 intMono L2
ENSG00000112357 PEX7 373790 sc-eQTL 8.95e-01 -0.0113 0.0856 0.424 intMono L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 5.41e-01 0.0336 0.0548 0.424 intMono L2
ENSG00000135525 MAP7 645535 sc-eQTL 3.02e-02 0.182 0.0833 0.424 intMono L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 4.83e-01 0.0627 0.0892 0.424 intMono L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 7.08e-01 0.0307 0.0817 0.424 intMono L2
ENSG00000286646 AL121933.2 412309 sc-eQTL 6.54e-01 -0.0423 0.0942 0.424 intMono L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 4.57e-09 -0.407 0.0664 0.43 ncMono L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 7.18e-01 -0.0204 0.0562 0.43 ncMono L2
ENSG00000112357 PEX7 373790 sc-eQTL 8.45e-01 -0.0176 0.0897 0.43 ncMono L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 3.66e-01 -0.0579 0.064 0.43 ncMono L2
ENSG00000135525 MAP7 645535 sc-eQTL 7.91e-01 0.021 0.0792 0.43 ncMono L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 9.61e-01 -0.00404 0.0833 0.43 ncMono L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 3.36e-02 -0.17 0.0792 0.43 ncMono L2
ENSG00000286646 AL121933.2 412309 sc-eQTL 2.01e-01 0.108 0.0842 0.43 ncMono L2
ENSG00000027697 IFNGR1 -23095 sc-eQTL 8.68e-01 -0.0143 0.0859 0.421 pDC L2
ENSG00000029363 BCLAF1 906503 sc-eQTL 7.07e-04 0.215 0.0621 0.421 pDC L2
ENSG00000112357 PEX7 373790 sc-eQTL 7.40e-01 0.0314 0.0946 0.421 pDC L2
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 6.04e-01 -0.0414 0.0796 0.421 pDC L2
ENSG00000135525 MAP7 645535 sc-eQTL 6.13e-01 -0.0335 0.066 0.421 pDC L2
ENSG00000197442 MAP3K5 403877 sc-eQTL 1.55e-01 -0.15 0.105 0.421 pDC L2
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 6.90e-01 0.0323 0.0808 0.421 pDC L2
ENSG00000286646 AL121933.2 412309 sc-eQTL 4.28e-01 -0.0773 0.0973 0.421 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -23095 sc-eQTL 1.97e-05 -0.309 0.0708 0.423 B_Memory LOneK1K
ENSG00000029363 BCLAF1 906503 sc-eQTL 7.03e-01 -0.0158 0.0415 0.423 B_Memory LOneK1K
ENSG00000112357 PEX7 373790 sc-eQTL 1.16e-01 0.133 0.0845 0.423 B_Memory LOneK1K
ENSG00000112378 PERP -911065 sc-eQTL 7.66e-01 -0.0236 0.079 0.423 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 2.93e-01 0.0548 0.052 0.423 B_Memory LOneK1K
ENSG00000197442 MAP3K5 403877 sc-eQTL 2.79e-01 0.0747 0.0688 0.423 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 2.16e-01 0.109 0.0879 0.423 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -23095 sc-eQTL 7.39e-02 -0.135 0.0753 0.423 B_Naive LOneK1K
ENSG00000029363 BCLAF1 906503 sc-eQTL 5.60e-01 0.0203 0.0348 0.423 B_Naive LOneK1K
ENSG00000112357 PEX7 373790 sc-eQTL 7.39e-01 0.0308 0.0923 0.423 B_Naive LOneK1K
ENSG00000112378 PERP -911065 sc-eQTL 4.99e-01 -0.056 0.0825 0.423 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 5.00e-01 0.0293 0.0434 0.423 B_Naive LOneK1K
ENSG00000197442 MAP3K5 403877 sc-eQTL 5.87e-01 0.0346 0.0636 0.423 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 7.33e-01 0.0264 0.0773 0.423 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -23095 sc-eQTL 1.84e-15 -0.379 0.0441 0.423 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 906503 sc-eQTL 5.56e-01 -0.0281 0.0477 0.423 CD14_Mono LOneK1K
ENSG00000112357 PEX7 373790 sc-eQTL 3.34e-02 -0.195 0.091 0.423 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 7.24e-01 0.0168 0.0474 0.423 CD14_Mono LOneK1K
ENSG00000135525 MAP7 645535 sc-eQTL 1.20e-01 -0.128 0.0818 0.423 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 403877 sc-eQTL 7.72e-01 -0.0161 0.0555 0.423 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 9.93e-01 0.000515 0.0568 0.423 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 412309 sc-eQTL 7.61e-01 0.0201 0.0661 0.423 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -23095 sc-eQTL 9.26e-10 -0.354 0.0552 0.425 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 906503 sc-eQTL 7.10e-01 -0.0203 0.0546 0.425 CD16_Mono LOneK1K
ENSG00000112357 PEX7 373790 sc-eQTL 9.48e-01 0.0059 0.0912 0.425 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 7.94e-01 -0.0147 0.0564 0.425 CD16_Mono LOneK1K
ENSG00000135525 MAP7 645535 sc-eQTL 1.00e-01 0.145 0.0876 0.425 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 403877 sc-eQTL 9.65e-01 -0.00317 0.0724 0.425 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 3.73e-01 -0.0674 0.0755 0.425 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 412309 sc-eQTL 2.87e-01 0.0915 0.0856 0.425 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -23095 sc-eQTL 4.14e-06 -0.252 0.0534 0.425 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 906503 sc-eQTL 4.37e-01 -0.0253 0.0325 0.425 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 373790 sc-eQTL 9.41e-01 0.007 0.0947 0.425 NK_CD56dim LOneK1K
ENSG00000112378 PERP -911065 sc-eQTL 5.42e-01 0.0358 0.0587 0.425 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -670860 sc-eQTL 8.16e-01 0.0119 0.0511 0.425 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 403877 sc-eQTL 4.81e-01 0.0488 0.069 0.425 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -671879 sc-eQTL 2.65e-01 0.0797 0.0714 0.425 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -23095 pQTL 1.62e-28 -0.173 0.0152 0.111 0.103 0.444
ENSG00000027697 IFNGR1 -23095 eQTL 8.330000000000001e-123 -0.28 0.0102 0.0 0.00216 0.446
ENSG00000135525 MAP7 645535 eQTL 0.00151 0.0755 0.0237 0.0133 0.00294 0.446

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -23095 2.62e-05 2.73e-05 4.29e-06 1.38e-05 2.7e-06 1.02e-05 2.53e-05 3.37e-06 1.97e-05 8.86e-06 2.52e-05 9.95e-06 3.59e-05 9.05e-06 5.23e-06 1.07e-05 1e-05 1.71e-05 5.37e-06 4.69e-06 8.4e-06 1.84e-05 2.09e-05 5.03e-06 3.29e-05 5.42e-06 8.26e-06 7.29e-06 2.07e-05 1.63e-05 1.29e-05 1.33e-06 1.4e-06 4.4e-06 9.01e-06 3.82e-06 1.84e-06 2.71e-06 3.4e-06 2.1e-06 1.12e-06 2.87e-05 2.66e-06 2.8e-07 1.02e-06 2.67e-06 3.18e-06 9.11e-07 9.39e-07
ENSG00000112357 \N 373790 1.27e-06 6.07e-07 1.31e-07 3.44e-07 1.08e-07 3.08e-07 5.28e-07 5.68e-08 3.94e-07 1.39e-07 5.29e-07 2.49e-07 8.34e-07 1.6e-07 1.78e-07 2.83e-07 1.01e-07 3.58e-07 9.71e-08 8.39e-08 1.65e-07 3.15e-07 3.02e-07 1.19e-07 9.71e-07 1.65e-07 4.16e-07 1.47e-07 2.11e-07 4.27e-07 1.88e-07 6.13e-08 4.34e-08 2.04e-07 3.23e-07 4.77e-08 9.11e-08 1.13e-07 7.54e-08 8.29e-09 4.89e-08 8.45e-07 1.93e-07 1.62e-07 3.29e-08 4.28e-08 1.04e-07 2.8e-09 5.01e-08
ENSG00000135525 MAP7 645535 5.59e-07 1.33e-07 6.04e-08 2.41e-07 9.25e-08 8.4e-08 1.73e-07 5.33e-08 1.45e-07 4.74e-08 1.57e-07 8.68e-08 1.79e-07 7.95e-08 5.72e-08 7.97e-08 3.87e-08 1.44e-07 5.82e-08 4.16e-08 1.19e-07 1.26e-07 1.45e-07 2.64e-08 1.85e-07 1.14e-07 1.2e-07 9.32e-08 1.12e-07 9.49e-08 9.64e-08 2.96e-08 3.35e-08 9.3e-08 5.65e-08 3.94e-08 5.59e-08 7.63e-08 6.3e-08 6.43e-08 3.89e-08 1.59e-07 5.78e-08 1.14e-07 6.92e-08 9.65e-09 1.19e-07 3.79e-09 4.77e-08