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Genes within 1Mb (chr6:137195453:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -23996 sc-eQTL 4.66e-02 0.305 0.152 0.942 B L1
ENSG00000029363 BCLAF1 905602 sc-eQTL 6.29e-01 -0.0331 0.0684 0.942 B L1
ENSG00000112357 PEX7 372889 sc-eQTL 6.75e-01 0.0765 0.182 0.942 B L1
ENSG00000112378 PERP -911966 sc-eQTL 2.38e-01 0.142 0.12 0.942 B L1
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 4.87e-01 -0.0674 0.0969 0.942 B L1
ENSG00000197442 MAP3K5 402976 sc-eQTL 1.07e-01 0.218 0.134 0.942 B L1
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 4.85e-01 -0.107 0.152 0.942 B L1
ENSG00000027697 IFNGR1 -23996 sc-eQTL 4.24e-01 -0.0826 0.103 0.942 CD4T L1
ENSG00000029363 BCLAF1 905602 sc-eQTL 8.01e-02 -0.136 0.0776 0.942 CD4T L1
ENSG00000112357 PEX7 372889 sc-eQTL 7.01e-01 0.0639 0.166 0.942 CD4T L1
ENSG00000112378 PERP -911966 sc-eQTL 5.79e-01 -0.0619 0.112 0.942 CD4T L1
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 6.20e-01 0.052 0.105 0.942 CD4T L1
ENSG00000197442 MAP3K5 402976 sc-eQTL 4.83e-01 0.056 0.0796 0.942 CD4T L1
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 4.12e-01 0.108 0.131 0.942 CD4T L1
ENSG00000027697 IFNGR1 -23996 sc-eQTL 3.30e-01 0.114 0.116 0.942 CD8T L1
ENSG00000029363 BCLAF1 905602 sc-eQTL 7.85e-01 0.0215 0.0789 0.942 CD8T L1
ENSG00000112357 PEX7 372889 sc-eQTL 6.49e-02 0.358 0.193 0.942 CD8T L1
ENSG00000112378 PERP -911966 sc-eQTL 7.54e-01 0.0398 0.127 0.942 CD8T L1
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 8.59e-01 -0.0175 0.0981 0.942 CD8T L1
ENSG00000197442 MAP3K5 402976 sc-eQTL 7.47e-01 0.0335 0.104 0.942 CD8T L1
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 9.51e-01 0.00883 0.144 0.942 CD8T L1
ENSG00000027697 IFNGR1 -23996 sc-eQTL 1.25e-01 0.213 0.138 0.944 DC L1
ENSG00000029363 BCLAF1 905602 sc-eQTL 1.98e-01 -0.161 0.124 0.944 DC L1
ENSG00000112357 PEX7 372889 sc-eQTL 1.57e-02 0.469 0.193 0.944 DC L1
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 7.62e-03 -0.393 0.146 0.944 DC L1
ENSG00000135525 MAP7 644634 sc-eQTL 6.55e-01 0.0718 0.161 0.944 DC L1
ENSG00000197442 MAP3K5 402976 sc-eQTL 7.75e-01 -0.044 0.154 0.944 DC L1
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 2.44e-01 -0.176 0.151 0.944 DC L1
ENSG00000286646 AL121933.2 411408 sc-eQTL 5.41e-01 0.123 0.201 0.944 DC L1
ENSG00000027697 IFNGR1 -23996 sc-eQTL 4.78e-01 -0.0838 0.118 0.942 Mono L1
ENSG00000029363 BCLAF1 905602 sc-eQTL 9.07e-04 -0.331 0.0983 0.942 Mono L1
ENSG00000112357 PEX7 372889 sc-eQTL 8.34e-01 -0.0417 0.199 0.942 Mono L1
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 4.64e-01 0.0734 0.1 0.942 Mono L1
ENSG00000135525 MAP7 644634 sc-eQTL 1.76e-01 -0.237 0.174 0.942 Mono L1
ENSG00000197442 MAP3K5 402976 sc-eQTL 3.09e-01 -0.119 0.117 0.942 Mono L1
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 8.10e-02 0.216 0.123 0.942 Mono L1
ENSG00000286646 AL121933.2 411408 sc-eQTL 9.71e-01 -0.00511 0.142 0.942 Mono L1
ENSG00000027697 IFNGR1 -23996 sc-eQTL 4.56e-01 0.0993 0.133 0.944 NK L1
ENSG00000029363 BCLAF1 905602 sc-eQTL 8.87e-01 0.01 0.0707 0.944 NK L1
ENSG00000112357 PEX7 372889 sc-eQTL 5.18e-01 0.133 0.205 0.944 NK L1
ENSG00000112378 PERP -911966 sc-eQTL 9.92e-01 -0.00127 0.129 0.944 NK L1
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 9.96e-01 -0.000496 0.111 0.944 NK L1
ENSG00000197442 MAP3K5 402976 sc-eQTL 9.46e-01 0.0107 0.159 0.944 NK L1
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 7.32e-01 -0.0538 0.157 0.944 NK L1
ENSG00000027697 IFNGR1 -23996 sc-eQTL 1.13e-02 0.301 0.118 0.942 Other_T L1
ENSG00000029363 BCLAF1 905602 sc-eQTL 2.63e-01 -0.112 0.0999 0.942 Other_T L1
ENSG00000112357 PEX7 372889 sc-eQTL 9.81e-01 0.00462 0.195 0.942 Other_T L1
ENSG00000112378 PERP -911966 sc-eQTL 8.08e-01 -0.038 0.156 0.942 Other_T L1
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 1.46e-01 -0.108 0.074 0.942 Other_T L1
ENSG00000146410 MTFR2 945118 sc-eQTL 7.19e-02 -0.202 0.112 0.942 Other_T L1
ENSG00000197442 MAP3K5 402976 sc-eQTL 3.74e-01 0.128 0.143 0.942 Other_T L1
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 2.81e-01 0.159 0.147 0.942 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -23996 sc-eQTL 3.93e-01 0.177 0.207 0.946 B_Activated L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 6.56e-01 -0.075 0.168 0.946 B_Activated L2
ENSG00000112357 PEX7 372889 sc-eQTL 5.25e-01 0.13 0.204 0.946 B_Activated L2
ENSG00000112378 PERP -911966 sc-eQTL 5.26e-01 -0.0669 0.105 0.946 B_Activated L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 3.04e-01 0.21 0.204 0.946 B_Activated L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 5.46e-01 0.138 0.229 0.946 B_Activated L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 3.57e-01 -0.165 0.178 0.946 B_Activated L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 5.70e-01 0.101 0.177 0.942 B_Intermediate L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 2.23e-02 -0.23 0.0997 0.942 B_Intermediate L2
ENSG00000112357 PEX7 372889 sc-eQTL 3.27e-01 -0.182 0.185 0.942 B_Intermediate L2
ENSG00000112378 PERP -911966 sc-eQTL 4.06e-01 0.141 0.169 0.942 B_Intermediate L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 3.55e-02 -0.278 0.131 0.942 B_Intermediate L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 6.55e-01 0.0717 0.16 0.942 B_Intermediate L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 4.44e-01 -0.144 0.188 0.942 B_Intermediate L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 7.26e-01 -0.0663 0.189 0.942 B_Memory L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 2.44e-03 -0.337 0.11 0.942 B_Memory L2
ENSG00000112357 PEX7 372889 sc-eQTL 4.44e-01 0.146 0.191 0.942 B_Memory L2
ENSG00000112378 PERP -911966 sc-eQTL 4.90e-01 0.124 0.179 0.942 B_Memory L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 3.44e-01 -0.117 0.123 0.942 B_Memory L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 9.16e-01 0.0179 0.169 0.942 B_Memory L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 1.80e-01 -0.246 0.183 0.942 B_Memory L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 4.58e-02 0.304 0.152 0.942 B_Naive1 L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 3.31e-01 -0.085 0.0872 0.942 B_Naive1 L2
ENSG00000112357 PEX7 372889 sc-eQTL 8.05e-01 -0.0498 0.202 0.942 B_Naive1 L2
ENSG00000112378 PERP -911966 sc-eQTL 8.92e-01 0.024 0.177 0.942 B_Naive1 L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 9.32e-01 0.00881 0.102 0.942 B_Naive1 L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 4.16e-03 0.409 0.141 0.942 B_Naive1 L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 8.38e-01 0.0329 0.16 0.942 B_Naive1 L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 2.64e-01 0.206 0.184 0.942 B_Naive2 L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 3.24e-01 0.106 0.107 0.942 B_Naive2 L2
ENSG00000112357 PEX7 372889 sc-eQTL 9.06e-01 0.0239 0.202 0.942 B_Naive2 L2
ENSG00000112378 PERP -911966 sc-eQTL 9.72e-01 0.00518 0.147 0.942 B_Naive2 L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 2.34e-01 -0.175 0.147 0.942 B_Naive2 L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 5.84e-01 -0.0859 0.157 0.942 B_Naive2 L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 2.18e-01 0.234 0.19 0.942 B_Naive2 L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 4.08e-01 0.145 0.174 0.939 CD4_CTL L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 8.49e-01 -0.0295 0.155 0.939 CD4_CTL L2
ENSG00000112357 PEX7 372889 sc-eQTL 3.16e-01 -0.194 0.193 0.939 CD4_CTL L2
ENSG00000112378 PERP -911966 sc-eQTL 7.74e-01 0.0565 0.196 0.939 CD4_CTL L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 9.50e-01 -0.00718 0.114 0.939 CD4_CTL L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 1.52e-01 -0.261 0.182 0.939 CD4_CTL L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 3.95e-01 0.152 0.178 0.939 CD4_CTL L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 2.85e-01 -0.104 0.0973 0.942 CD4_Naive L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 1.65e-01 -0.109 0.078 0.942 CD4_Naive L2
ENSG00000112357 PEX7 372889 sc-eQTL 5.63e-01 0.107 0.184 0.942 CD4_Naive L2
ENSG00000112378 PERP -911966 sc-eQTL 3.29e-01 0.148 0.152 0.942 CD4_Naive L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 6.52e-01 0.0482 0.107 0.942 CD4_Naive L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 5.17e-01 0.0508 0.0782 0.942 CD4_Naive L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 1.55e-01 0.196 0.137 0.942 CD4_Naive L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 1.13e-01 0.214 0.134 0.942 CD4_TCM L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 1.29e-01 -0.129 0.0849 0.942 CD4_TCM L2
ENSG00000112357 PEX7 372889 sc-eQTL 2.14e-01 0.246 0.198 0.942 CD4_TCM L2
ENSG00000112378 PERP -911966 sc-eQTL 2.01e-01 -0.215 0.167 0.942 CD4_TCM L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 6.00e-01 0.0512 0.0974 0.942 CD4_TCM L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 5.00e-01 0.0749 0.111 0.942 CD4_TCM L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 7.86e-01 -0.0371 0.137 0.942 CD4_TCM L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 6.04e-01 -0.0791 0.152 0.942 CD4_TEM L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 8.87e-01 -0.0153 0.108 0.942 CD4_TEM L2
ENSG00000112357 PEX7 372889 sc-eQTL 2.12e-01 -0.245 0.196 0.942 CD4_TEM L2
ENSG00000112378 PERP -911966 sc-eQTL 7.99e-01 0.0405 0.159 0.942 CD4_TEM L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 3.28e-01 -0.0989 0.101 0.942 CD4_TEM L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 9.49e-01 0.0101 0.156 0.942 CD4_TEM L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 2.66e-01 0.18 0.162 0.942 CD4_TEM L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 1.77e-02 0.331 0.139 0.942 CD8_CTL L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 9.15e-01 -0.0101 0.0936 0.942 CD8_CTL L2
ENSG00000112357 PEX7 372889 sc-eQTL 5.88e-01 -0.105 0.193 0.942 CD8_CTL L2
ENSG00000112378 PERP -911966 sc-eQTL 7.12e-01 -0.0687 0.186 0.942 CD8_CTL L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 5.07e-01 -0.0784 0.118 0.942 CD8_CTL L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 9.04e-01 0.0201 0.167 0.942 CD8_CTL L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 9.64e-01 -0.00758 0.166 0.942 CD8_CTL L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 9.41e-01 -0.0104 0.14 0.942 CD8_Naive L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 5.92e-01 -0.0524 0.0975 0.942 CD8_Naive L2
ENSG00000112357 PEX7 372889 sc-eQTL 2.24e-01 0.246 0.202 0.942 CD8_Naive L2
ENSG00000112378 PERP -911966 sc-eQTL 6.32e-01 0.0739 0.154 0.942 CD8_Naive L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 6.32e-01 -0.0524 0.109 0.942 CD8_Naive L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 7.94e-02 0.227 0.129 0.942 CD8_Naive L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 6.02e-01 -0.0844 0.162 0.942 CD8_Naive L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 3.67e-01 0.161 0.178 0.942 CD8_TCM L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 6.07e-01 0.0689 0.134 0.942 CD8_TCM L2
ENSG00000112357 PEX7 372889 sc-eQTL 9.92e-02 0.337 0.204 0.942 CD8_TCM L2
ENSG00000112378 PERP -911966 sc-eQTL 5.26e-01 0.127 0.201 0.942 CD8_TCM L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 9.82e-01 0.0022 0.0968 0.942 CD8_TCM L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 7.72e-01 -0.0501 0.173 0.942 CD8_TCM L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 4.65e-01 0.129 0.177 0.942 CD8_TCM L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 5.06e-01 0.114 0.171 0.938 CD8_TEM L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 1.77e-01 0.218 0.161 0.938 CD8_TEM L2
ENSG00000112357 PEX7 372889 sc-eQTL 3.89e-01 0.17 0.197 0.938 CD8_TEM L2
ENSG00000112378 PERP -911966 sc-eQTL 7.15e-01 -0.0749 0.205 0.938 CD8_TEM L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 5.25e-01 0.0803 0.126 0.938 CD8_TEM L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 7.81e-01 0.0542 0.195 0.938 CD8_TEM L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 8.35e-01 0.039 0.187 0.938 CD8_TEM L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 2.90e-02 0.304 0.138 0.942 MAIT L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 9.65e-01 0.00505 0.116 0.942 MAIT L2
ENSG00000112357 PEX7 372889 sc-eQTL 4.25e-01 -0.152 0.189 0.942 MAIT L2
ENSG00000112378 PERP -911966 sc-eQTL 2.37e-01 0.234 0.197 0.942 MAIT L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 2.46e-01 -0.109 0.0939 0.942 MAIT L2
ENSG00000146410 MTFR2 945118 sc-eQTL 3.48e-01 -0.147 0.157 0.942 MAIT L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 3.64e-01 0.149 0.164 0.942 MAIT L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 8.99e-01 -0.0221 0.174 0.942 MAIT L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 1.31e-01 0.236 0.156 0.942 NK_CD56bright L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 4.82e-01 -0.0814 0.116 0.942 NK_CD56bright L2
ENSG00000112357 PEX7 372889 sc-eQTL 5.45e-01 0.124 0.204 0.942 NK_CD56bright L2
ENSG00000112378 PERP -911966 sc-eQTL 7.81e-01 -0.0511 0.183 0.942 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 1.99e-01 -0.15 0.116 0.942 NK_CD56bright L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 9.63e-01 0.00831 0.178 0.942 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 4.06e-01 0.155 0.186 0.942 NK_CD56bright L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 2.61e-01 0.136 0.121 0.944 NK_CD56dim L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 7.19e-01 -0.0286 0.0793 0.944 NK_CD56dim L2
ENSG00000112357 PEX7 372889 sc-eQTL 2.90e-01 0.221 0.209 0.944 NK_CD56dim L2
ENSG00000112378 PERP -911966 sc-eQTL 9.76e-01 0.00451 0.147 0.944 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 8.90e-01 0.0158 0.114 0.944 NK_CD56dim L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 8.22e-01 -0.037 0.165 0.944 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 5.31e-01 -0.107 0.171 0.944 NK_CD56dim L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 3.68e-01 0.142 0.158 0.945 NK_HLA L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 1.95e-01 0.173 0.133 0.945 NK_HLA L2
ENSG00000112357 PEX7 372889 sc-eQTL 6.93e-02 -0.363 0.199 0.945 NK_HLA L2
ENSG00000112378 PERP -911966 sc-eQTL 4.15e-01 -0.133 0.162 0.945 NK_HLA L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 3.95e-01 0.106 0.125 0.945 NK_HLA L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 1.27e-01 0.303 0.198 0.945 NK_HLA L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 6.07e-01 0.104 0.202 0.945 NK_HLA L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 7.21e-01 0.0458 0.128 0.944 NK_cytokine L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 7.42e-01 0.0315 0.0957 0.944 NK_cytokine L2
ENSG00000112357 PEX7 372889 sc-eQTL 6.45e-01 0.0929 0.201 0.944 NK_cytokine L2
ENSG00000112378 PERP -911966 sc-eQTL 4.80e-01 -0.108 0.152 0.944 NK_cytokine L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 7.78e-01 -0.0323 0.114 0.944 NK_cytokine L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 8.03e-01 0.0394 0.157 0.944 NK_cytokine L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 5.56e-01 -0.102 0.172 0.944 NK_cytokine L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 6.18e-01 -0.124 0.248 0.944 PB L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 9.12e-01 -0.0236 0.214 0.944 PB L2
ENSG00000112357 PEX7 372889 sc-eQTL 3.89e-01 0.22 0.254 0.944 PB L2
ENSG00000112378 PERP -911966 sc-eQTL 3.82e-01 0.139 0.158 0.944 PB L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 7.05e-01 -0.0731 0.193 0.944 PB L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 8.47e-01 0.0424 0.219 0.944 PB L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 4.01e-01 -0.195 0.231 0.944 PB L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 9.19e-02 0.267 0.158 0.943 Pro_T L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 7.59e-01 -0.0506 0.165 0.943 Pro_T L2
ENSG00000112357 PEX7 372889 sc-eQTL 5.81e-01 0.107 0.193 0.943 Pro_T L2
ENSG00000112378 PERP -911966 sc-eQTL 6.26e-01 -0.0749 0.154 0.943 Pro_T L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 9.03e-01 -0.0118 0.0969 0.943 Pro_T L2
ENSG00000146410 MTFR2 945118 sc-eQTL 6.63e-01 0.0586 0.134 0.943 Pro_T L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 6.14e-01 0.0947 0.187 0.943 Pro_T L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 4.59e-01 0.139 0.188 0.943 Pro_T L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 2.63e-01 -0.209 0.186 0.942 Treg L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 3.84e-01 -0.105 0.12 0.942 Treg L2
ENSG00000112357 PEX7 372889 sc-eQTL 8.97e-01 0.0255 0.197 0.942 Treg L2
ENSG00000112378 PERP -911966 sc-eQTL 2.02e-01 -0.271 0.212 0.942 Treg L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 9.27e-01 0.0109 0.119 0.942 Treg L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 5.92e-01 0.0689 0.128 0.942 Treg L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 8.36e-01 0.0374 0.181 0.942 Treg L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 1.77e-01 0.213 0.157 0.944 cDC L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 7.15e-01 0.0581 0.159 0.944 cDC L2
ENSG00000112357 PEX7 372889 sc-eQTL 8.62e-04 0.671 0.198 0.944 cDC L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 1.74e-01 -0.211 0.155 0.944 cDC L2
ENSG00000135525 MAP7 644634 sc-eQTL 1.34e-01 0.272 0.181 0.944 cDC L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 8.73e-01 0.0257 0.16 0.944 cDC L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 9.80e-01 0.0051 0.203 0.944 cDC L2
ENSG00000286646 AL121933.2 411408 sc-eQTL 8.27e-01 -0.0457 0.209 0.944 cDC L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 4.61e-01 -0.083 0.112 0.942 cMono_IL1B L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 3.21e-02 -0.258 0.119 0.942 cMono_IL1B L2
ENSG00000112357 PEX7 372889 sc-eQTL 2.59e-01 -0.229 0.202 0.942 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 6.52e-01 0.0547 0.121 0.942 cMono_IL1B L2
ENSG00000135525 MAP7 644634 sc-eQTL 4.63e-01 -0.128 0.174 0.942 cMono_IL1B L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 1.95e-01 -0.163 0.126 0.942 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 1.97e-01 0.167 0.129 0.942 cMono_IL1B L2
ENSG00000286646 AL121933.2 411408 sc-eQTL 7.71e-01 0.0472 0.162 0.942 cMono_IL1B L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 3.97e-01 -0.111 0.13 0.942 cMono_S100A L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 3.52e-02 -0.281 0.133 0.942 cMono_S100A L2
ENSG00000112357 PEX7 372889 sc-eQTL 7.23e-01 0.0742 0.209 0.942 cMono_S100A L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 5.07e-01 -0.0771 0.116 0.942 cMono_S100A L2
ENSG00000135525 MAP7 644634 sc-eQTL 5.81e-01 -0.108 0.195 0.942 cMono_S100A L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 7.12e-01 -0.0582 0.158 0.942 cMono_S100A L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 2.85e-01 0.178 0.166 0.942 cMono_S100A L2
ENSG00000286646 AL121933.2 411408 sc-eQTL 8.88e-02 -0.276 0.161 0.942 cMono_S100A L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 5.01e-02 0.387 0.196 0.942 gdT L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 1.98e-02 -0.404 0.171 0.942 gdT L2
ENSG00000112357 PEX7 372889 sc-eQTL 7.32e-01 -0.0862 0.251 0.942 gdT L2
ENSG00000112378 PERP -911966 sc-eQTL 7.47e-01 0.071 0.219 0.942 gdT L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 2.25e-01 0.148 0.121 0.942 gdT L2
ENSG00000146410 MTFR2 945118 sc-eQTL 3.30e-02 -0.408 0.189 0.942 gdT L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 3.78e-01 -0.228 0.257 0.942 gdT L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 2.36e-01 0.262 0.22 0.942 gdT L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 7.76e-01 -0.0391 0.137 0.947 intMono L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 1.17e-01 -0.284 0.18 0.947 intMono L2
ENSG00000112357 PEX7 372889 sc-eQTL 3.11e-01 -0.188 0.185 0.947 intMono L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 9.97e-01 -0.000377 0.119 0.947 intMono L2
ENSG00000135525 MAP7 644634 sc-eQTL 8.16e-01 0.0425 0.182 0.947 intMono L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 3.41e-01 0.184 0.193 0.947 intMono L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 5.98e-01 0.0934 0.177 0.947 intMono L2
ENSG00000286646 AL121933.2 411408 sc-eQTL 5.90e-01 0.11 0.204 0.947 intMono L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 4.80e-01 -0.118 0.167 0.948 ncMono L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 3.72e-01 0.116 0.13 0.948 ncMono L2
ENSG00000112357 PEX7 372889 sc-eQTL 8.92e-01 0.0282 0.207 0.948 ncMono L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 7.89e-01 -0.0397 0.148 0.948 ncMono L2
ENSG00000135525 MAP7 644634 sc-eQTL 3.12e-01 0.185 0.182 0.948 ncMono L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 9.48e-01 -0.0125 0.192 0.948 ncMono L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 4.93e-01 -0.127 0.185 0.948 ncMono L2
ENSG00000286646 AL121933.2 411408 sc-eQTL 1.35e-01 0.291 0.194 0.948 ncMono L2
ENSG00000027697 IFNGR1 -23996 sc-eQTL 6.82e-01 0.0807 0.196 0.949 pDC L2
ENSG00000029363 BCLAF1 905602 sc-eQTL 3.88e-01 -0.127 0.147 0.949 pDC L2
ENSG00000112357 PEX7 372889 sc-eQTL 3.85e-01 -0.188 0.216 0.949 pDC L2
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 1.53e-01 -0.26 0.181 0.949 pDC L2
ENSG00000135525 MAP7 644634 sc-eQTL 6.11e-02 -0.282 0.149 0.949 pDC L2
ENSG00000197442 MAP3K5 402976 sc-eQTL 1.09e-01 0.386 0.24 0.949 pDC L2
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 1.98e-01 -0.238 0.184 0.949 pDC L2
ENSG00000286646 AL121933.2 411408 sc-eQTL 3.02e-01 0.23 0.222 0.949 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -23996 sc-eQTL 3.26e-01 0.156 0.158 0.942 B_Memory LOneK1K
ENSG00000029363 BCLAF1 905602 sc-eQTL 3.90e-02 -0.183 0.088 0.942 B_Memory LOneK1K
ENSG00000112357 PEX7 372889 sc-eQTL 4.75e-01 0.13 0.182 0.942 B_Memory LOneK1K
ENSG00000112378 PERP -911966 sc-eQTL 3.04e-01 0.174 0.169 0.942 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 7.00e-02 -0.202 0.111 0.942 B_Memory LOneK1K
ENSG00000197442 MAP3K5 402976 sc-eQTL 2.12e-01 0.184 0.147 0.942 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 4.68e-01 -0.137 0.189 0.942 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -23996 sc-eQTL 4.65e-02 0.322 0.161 0.942 B_Naive LOneK1K
ENSG00000029363 BCLAF1 905602 sc-eQTL 4.97e-01 -0.0507 0.0744 0.942 B_Naive LOneK1K
ENSG00000112357 PEX7 372889 sc-eQTL 9.96e-01 0.00102 0.197 0.942 B_Naive LOneK1K
ENSG00000112378 PERP -911966 sc-eQTL 9.15e-01 -0.0188 0.177 0.942 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 5.46e-01 -0.0561 0.0928 0.942 B_Naive LOneK1K
ENSG00000197442 MAP3K5 402976 sc-eQTL 1.63e-01 0.19 0.135 0.942 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 7.90e-01 0.0441 0.165 0.942 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -23996 sc-eQTL 2.84e-01 -0.121 0.113 0.942 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 905602 sc-eQTL 9.72e-03 -0.27 0.104 0.942 CD14_Mono LOneK1K
ENSG00000112357 PEX7 372889 sc-eQTL 4.99e-01 -0.137 0.203 0.942 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 8.07e-01 0.0256 0.105 0.942 CD14_Mono LOneK1K
ENSG00000135525 MAP7 644634 sc-eQTL 2.57e-01 -0.205 0.181 0.942 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 402976 sc-eQTL 1.19e-01 -0.191 0.122 0.942 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 1.07e-01 0.201 0.125 0.942 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 411408 sc-eQTL 6.16e-01 -0.0731 0.146 0.942 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -23996 sc-eQTL 7.96e-01 -0.0341 0.132 0.944 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 905602 sc-eQTL 3.83e-01 -0.104 0.119 0.944 CD16_Mono LOneK1K
ENSG00000112357 PEX7 372889 sc-eQTL 7.02e-01 -0.0762 0.199 0.944 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 7.84e-01 -0.0337 0.123 0.944 CD16_Mono LOneK1K
ENSG00000135525 MAP7 644634 sc-eQTL 7.60e-01 0.0587 0.192 0.944 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 402976 sc-eQTL 5.32e-01 0.0986 0.158 0.944 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 8.79e-01 -0.0251 0.165 0.944 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 411408 sc-eQTL 1.29e-01 0.284 0.186 0.944 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -23996 sc-eQTL 4.67e-01 0.0914 0.126 0.944 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 905602 sc-eQTL 7.06e-01 0.0275 0.0729 0.944 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 372889 sc-eQTL 6.32e-01 0.102 0.212 0.944 NK_CD56dim LOneK1K
ENSG00000112378 PERP -911966 sc-eQTL 9.10e-01 -0.0148 0.132 0.944 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -671761 sc-eQTL 8.61e-01 0.0201 0.115 0.944 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 402976 sc-eQTL 8.19e-01 0.0355 0.155 0.944 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -672780 sc-eQTL 6.34e-01 -0.0764 0.16 0.944 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -23996 pQTL 8.92e-05 -0.132 0.0335 0.0 0.0 0.0567
ENSG00000027697 IFNGR1 -23996 eQTL 1.04e-08 -0.17 0.0295 0.0 0.0 0.0559

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -23996 3.75e-05 2.48e-05 4.04e-06 1.21e-05 3.53e-06 1.15e-05 3.29e-05 3.67e-06 2.17e-05 1.03e-05 2.74e-05 1.09e-05 3.69e-05 9.2e-06 5.45e-06 1.18e-05 1.11e-05 1.88e-05 5.04e-06 4.92e-06 9.96e-06 2.28e-05 2.11e-05 5.66e-06 2.94e-05 5.83e-06 1.05e-05 9e-06 2.3e-05 1.71e-05 1.38e-05 1.65e-06 2.15e-06 4.84e-06 8.83e-06 4.22e-06 2.12e-06 2.72e-06 3.64e-06 2.79e-06 1.67e-06 2.49e-05 3.25e-06 2.66e-07 1.99e-06 2.64e-06 3.33e-06 1.48e-06 1.46e-06
ENSG00000146410 \N 945129 2.69e-07 1.11e-07 3.62e-08 1.78e-07 9.91e-08 9.61e-08 1.38e-07 5.49e-08 1.41e-07 4.38e-08 1.59e-07 8.03e-08 1.33e-07 6.21e-08 6e-08 7.89e-08 4.94e-08 1.14e-07 5.21e-08 4.04e-08 1.05e-07 1.27e-07 1.26e-07 4.26e-08 1.33e-07 1.15e-07 1.12e-07 9.15e-08 1.05e-07 1.09e-07 9.58e-08 4.03e-08 3.56e-08 8.65e-08 8.98e-08 3.99e-08 4.84e-08 9.6e-08 7.23e-08 3.05e-08 3.57e-08 1.33e-07 4.04e-08 2.09e-08 7.91e-08 1.68e-08 1.22e-07 3.8e-09 4.94e-08