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Genes within 1Mb (chr6:137189756:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -29693 sc-eQTL 8.59e-02 0.117 0.0677 0.592 B L1
ENSG00000029363 BCLAF1 899905 sc-eQTL 3.89e-01 -0.0261 0.0303 0.592 B L1
ENSG00000112357 PEX7 367192 sc-eQTL 5.16e-01 -0.0524 0.0806 0.592 B L1
ENSG00000112378 PERP -917663 sc-eQTL 4.20e-01 -0.0431 0.0533 0.592 B L1
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 2.88e-01 -0.0457 0.0429 0.592 B L1
ENSG00000197442 MAP3K5 397279 sc-eQTL 6.29e-01 -0.029 0.0599 0.592 B L1
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 5.94e-01 -0.0361 0.0676 0.592 B L1
ENSG00000027697 IFNGR1 -29693 sc-eQTL 4.35e-05 0.182 0.0437 0.592 CD4T L1
ENSG00000029363 BCLAF1 899905 sc-eQTL 1.15e-01 -0.0541 0.0342 0.592 CD4T L1
ENSG00000112357 PEX7 367192 sc-eQTL 7.72e-02 0.129 0.0726 0.592 CD4T L1
ENSG00000112378 PERP -917663 sc-eQTL 6.73e-02 0.0896 0.0487 0.592 CD4T L1
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 8.41e-01 -0.00926 0.046 0.592 CD4T L1
ENSG00000197442 MAP3K5 397279 sc-eQTL 2.73e-01 -0.0384 0.035 0.592 CD4T L1
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 7.78e-02 -0.102 0.0575 0.592 CD4T L1
ENSG00000027697 IFNGR1 -29693 sc-eQTL 2.08e-03 0.158 0.0506 0.592 CD8T L1
ENSG00000029363 BCLAF1 899905 sc-eQTL 8.84e-01 -0.00512 0.035 0.592 CD8T L1
ENSG00000112357 PEX7 367192 sc-eQTL 6.67e-01 0.0371 0.0862 0.592 CD8T L1
ENSG00000112378 PERP -917663 sc-eQTL 7.11e-01 -0.0209 0.0564 0.592 CD8T L1
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 9.33e-01 0.00368 0.0435 0.592 CD8T L1
ENSG00000197442 MAP3K5 397279 sc-eQTL 3.14e-01 -0.0463 0.0459 0.592 CD8T L1
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 7.42e-01 0.0211 0.0639 0.592 CD8T L1
ENSG00000027697 IFNGR1 -29693 sc-eQTL 4.43e-02 0.126 0.0625 0.59 DC L1
ENSG00000029363 BCLAF1 899905 sc-eQTL 4.18e-01 -0.046 0.0567 0.59 DC L1
ENSG00000112357 PEX7 367192 sc-eQTL 3.79e-02 -0.184 0.0879 0.59 DC L1
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 8.20e-01 -0.0153 0.0674 0.59 DC L1
ENSG00000135525 MAP7 638937 sc-eQTL 5.13e-01 0.0479 0.0729 0.59 DC L1
ENSG00000197442 MAP3K5 397279 sc-eQTL 4.44e-01 0.0536 0.0699 0.59 DC L1
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 6.04e-01 0.0356 0.0687 0.59 DC L1
ENSG00000286646 AL121933.2 405711 sc-eQTL 2.24e-02 -0.207 0.0902 0.59 DC L1
ENSG00000027697 IFNGR1 -29693 sc-eQTL 5.55e-06 0.231 0.0495 0.592 Mono L1
ENSG00000029363 BCLAF1 899905 sc-eQTL 9.15e-01 -0.00474 0.0445 0.592 Mono L1
ENSG00000112357 PEX7 367192 sc-eQTL 8.79e-02 0.149 0.0869 0.592 Mono L1
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 7.29e-01 -0.0153 0.0441 0.592 Mono L1
ENSG00000135525 MAP7 638937 sc-eQTL 8.19e-01 0.0177 0.0772 0.592 Mono L1
ENSG00000197442 MAP3K5 397279 sc-eQTL 3.98e-01 -0.0435 0.0514 0.592 Mono L1
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 8.30e-01 0.0118 0.0547 0.592 Mono L1
ENSG00000286646 AL121933.2 405711 sc-eQTL 6.63e-01 -0.0272 0.0623 0.592 Mono L1
ENSG00000027697 IFNGR1 -29693 sc-eQTL 2.42e-03 0.173 0.0564 0.592 NK L1
ENSG00000029363 BCLAF1 899905 sc-eQTL 8.01e-01 0.00774 0.0306 0.592 NK L1
ENSG00000112357 PEX7 367192 sc-eQTL 1.54e-01 -0.127 0.0886 0.592 NK L1
ENSG00000112378 PERP -917663 sc-eQTL 2.14e-01 -0.0697 0.0559 0.592 NK L1
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 4.18e-01 -0.0389 0.0479 0.592 NK L1
ENSG00000197442 MAP3K5 397279 sc-eQTL 1.41e-01 -0.101 0.0684 0.592 NK L1
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 2.51e-01 -0.078 0.0678 0.592 NK L1
ENSG00000027697 IFNGR1 -29693 sc-eQTL 1.58e-01 0.0764 0.054 0.592 Other_T L1
ENSG00000029363 BCLAF1 899905 sc-eQTL 7.05e-01 0.0172 0.0455 0.592 Other_T L1
ENSG00000112357 PEX7 367192 sc-eQTL 9.26e-01 -0.00827 0.0885 0.592 Other_T L1
ENSG00000112378 PERP -917663 sc-eQTL 2.96e-01 0.0742 0.0708 0.592 Other_T L1
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 7.39e-01 0.0113 0.0338 0.592 Other_T L1
ENSG00000146410 MTFR2 939421 sc-eQTL 3.99e-01 0.0431 0.0511 0.592 Other_T L1
ENSG00000197442 MAP3K5 397279 sc-eQTL 3.33e-01 -0.0632 0.0651 0.592 Other_T L1
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 3.03e-01 0.069 0.0669 0.592 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -29693 sc-eQTL 1.49e-01 0.134 0.0925 0.599 B_Activated L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 5.29e-01 0.0476 0.0755 0.599 B_Activated L2
ENSG00000112357 PEX7 367192 sc-eQTL 7.61e-01 0.0279 0.0915 0.599 B_Activated L2
ENSG00000112378 PERP -917663 sc-eQTL 6.56e-01 -0.0211 0.0473 0.599 B_Activated L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 4.40e-01 -0.071 0.0917 0.599 B_Activated L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 1.12e-01 -0.163 0.102 0.599 B_Activated L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 8.26e-02 -0.139 0.0795 0.599 B_Activated L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 8.52e-02 0.139 0.0803 0.594 B_Intermediate L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 2.38e-01 -0.0543 0.0459 0.594 B_Intermediate L2
ENSG00000112357 PEX7 367192 sc-eQTL 2.29e-01 -0.102 0.0843 0.594 B_Intermediate L2
ENSG00000112378 PERP -917663 sc-eQTL 5.43e-01 0.0469 0.0771 0.594 B_Intermediate L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 7.60e-01 -0.0185 0.0605 0.594 B_Intermediate L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 5.67e-02 -0.139 0.0725 0.594 B_Intermediate L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 2.25e-01 -0.104 0.0856 0.594 B_Intermediate L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 4.43e-01 0.0684 0.089 0.591 B_Memory L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 5.91e-01 -0.0284 0.0529 0.591 B_Memory L2
ENSG00000112357 PEX7 367192 sc-eQTL 4.77e-01 -0.064 0.0899 0.591 B_Memory L2
ENSG00000112378 PERP -917663 sc-eQTL 8.53e-01 -0.0157 0.0847 0.591 B_Memory L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 4.04e-01 -0.0486 0.0582 0.591 B_Memory L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 9.02e-01 -0.00982 0.0796 0.591 B_Memory L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 7.45e-01 0.0282 0.0867 0.591 B_Memory L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 1.58e-01 0.097 0.0684 0.592 B_Naive1 L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 8.65e-01 -0.00666 0.0393 0.592 B_Naive1 L2
ENSG00000112357 PEX7 367192 sc-eQTL 6.45e-01 -0.0418 0.0906 0.592 B_Naive1 L2
ENSG00000112378 PERP -917663 sc-eQTL 6.63e-01 -0.0345 0.0793 0.592 B_Naive1 L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 3.36e-01 -0.0442 0.0459 0.592 B_Naive1 L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 7.78e-01 0.0183 0.0646 0.592 B_Naive1 L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 5.10e-01 -0.0475 0.072 0.592 B_Naive1 L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 4.39e-01 -0.0653 0.0841 0.592 B_Naive2 L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 6.27e-01 -0.0238 0.0488 0.592 B_Naive2 L2
ENSG00000112357 PEX7 367192 sc-eQTL 8.39e-01 -0.0187 0.0922 0.592 B_Naive2 L2
ENSG00000112378 PERP -917663 sc-eQTL 5.86e-01 -0.0366 0.0671 0.592 B_Naive2 L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 8.44e-01 -0.0132 0.0671 0.592 B_Naive2 L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 3.46e-01 -0.0673 0.0713 0.592 B_Naive2 L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 9.38e-01 -0.00673 0.0867 0.592 B_Naive2 L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 4.63e-01 0.0576 0.0784 0.595 CD4_CTL L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 1.55e-01 -0.099 0.0693 0.595 CD4_CTL L2
ENSG00000112357 PEX7 367192 sc-eQTL 3.70e-01 0.0782 0.0869 0.595 CD4_CTL L2
ENSG00000112378 PERP -917663 sc-eQTL 5.28e-01 0.0558 0.0882 0.595 CD4_CTL L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 3.28e-01 -0.0504 0.0514 0.595 CD4_CTL L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 2.46e-01 -0.0952 0.0819 0.595 CD4_CTL L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 7.78e-01 0.0226 0.0801 0.595 CD4_CTL L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 1.88e-02 0.101 0.0425 0.592 CD4_Naive L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 3.61e-01 -0.0316 0.0345 0.592 CD4_Naive L2
ENSG00000112357 PEX7 367192 sc-eQTL 5.43e-02 0.156 0.0806 0.592 CD4_Naive L2
ENSG00000112378 PERP -917663 sc-eQTL 1.38e-01 0.0994 0.0668 0.592 CD4_Naive L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 8.16e-01 0.011 0.0471 0.592 CD4_Naive L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 2.55e-01 -0.0394 0.0345 0.592 CD4_Naive L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 5.86e-02 -0.115 0.0605 0.592 CD4_Naive L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 7.37e-03 0.161 0.0597 0.592 CD4_TCM L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 1.55e-01 -0.0544 0.0381 0.592 CD4_TCM L2
ENSG00000112357 PEX7 367192 sc-eQTL 9.54e-01 0.0052 0.0891 0.592 CD4_TCM L2
ENSG00000112378 PERP -917663 sc-eQTL 1.03e-01 0.122 0.0748 0.592 CD4_TCM L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 7.75e-01 -0.0125 0.0437 0.592 CD4_TCM L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 9.40e-01 0.00377 0.0498 0.592 CD4_TCM L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 7.76e-01 0.0175 0.0613 0.592 CD4_TCM L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 3.88e-03 0.197 0.0674 0.592 CD4_TEM L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 1.48e-01 -0.0704 0.0485 0.592 CD4_TEM L2
ENSG00000112357 PEX7 367192 sc-eQTL 3.38e-01 0.0852 0.0886 0.592 CD4_TEM L2
ENSG00000112378 PERP -917663 sc-eQTL 6.00e-01 0.0378 0.0719 0.592 CD4_TEM L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 7.43e-01 -0.015 0.0457 0.592 CD4_TEM L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 3.07e-01 -0.072 0.0704 0.592 CD4_TEM L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 9.78e-01 -0.00205 0.0733 0.592 CD4_TEM L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 2.90e-02 0.134 0.0609 0.592 CD8_CTL L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 1.40e-01 -0.0606 0.0409 0.592 CD8_CTL L2
ENSG00000112357 PEX7 367192 sc-eQTL 7.60e-01 -0.026 0.0847 0.592 CD8_CTL L2
ENSG00000112378 PERP -917663 sc-eQTL 3.77e-01 -0.072 0.0813 0.592 CD8_CTL L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 5.62e-01 -0.0301 0.0518 0.592 CD8_CTL L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 1.67e-01 -0.101 0.0728 0.592 CD8_CTL L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 4.36e-01 0.0568 0.0728 0.592 CD8_CTL L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 2.84e-04 0.221 0.0597 0.592 CD8_Naive L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 5.86e-01 0.0235 0.043 0.592 CD8_Naive L2
ENSG00000112357 PEX7 367192 sc-eQTL 2.78e-01 0.0969 0.0891 0.592 CD8_Naive L2
ENSG00000112378 PERP -917663 sc-eQTL 1.14e-01 0.107 0.0675 0.592 CD8_Naive L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 8.06e-01 0.0118 0.0482 0.592 CD8_Naive L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 3.15e-02 -0.122 0.0565 0.592 CD8_Naive L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 7.97e-01 -0.0183 0.0713 0.592 CD8_Naive L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 6.83e-02 0.151 0.0823 0.595 CD8_TCM L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 8.12e-01 -0.0148 0.0623 0.595 CD8_TCM L2
ENSG00000112357 PEX7 367192 sc-eQTL 5.40e-01 0.0584 0.0952 0.595 CD8_TCM L2
ENSG00000112378 PERP -917663 sc-eQTL 5.53e-01 -0.0554 0.0932 0.595 CD8_TCM L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 5.13e-01 -0.0295 0.0449 0.595 CD8_TCM L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 8.84e-01 -0.0117 0.0803 0.595 CD8_TCM L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 1.05e-01 0.133 0.0817 0.595 CD8_TCM L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 3.82e-01 0.0684 0.0781 0.603 CD8_TEM L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 6.17e-01 -0.037 0.0738 0.603 CD8_TEM L2
ENSG00000112357 PEX7 367192 sc-eQTL 4.96e-01 0.0613 0.09 0.603 CD8_TEM L2
ENSG00000112378 PERP -917663 sc-eQTL 9.62e-02 0.155 0.093 0.603 CD8_TEM L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 8.77e-01 -0.00892 0.0577 0.603 CD8_TEM L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 7.66e-02 -0.158 0.0885 0.603 CD8_TEM L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 5.44e-01 -0.052 0.0855 0.603 CD8_TEM L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 9.51e-02 0.105 0.0625 0.591 MAIT L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 5.44e-01 -0.0318 0.0523 0.591 MAIT L2
ENSG00000112357 PEX7 367192 sc-eQTL 5.45e-01 -0.0518 0.0853 0.591 MAIT L2
ENSG00000112378 PERP -917663 sc-eQTL 1.07e-01 0.143 0.0885 0.591 MAIT L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 7.13e-01 -0.0156 0.0423 0.591 MAIT L2
ENSG00000146410 MTFR2 939421 sc-eQTL 2.48e-01 -0.0815 0.0704 0.591 MAIT L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 4.28e-01 -0.0585 0.0737 0.591 MAIT L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 6.54e-01 0.0352 0.0783 0.591 MAIT L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 8.35e-02 0.118 0.0676 0.587 NK_CD56bright L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 4.38e-01 -0.039 0.0502 0.587 NK_CD56bright L2
ENSG00000112357 PEX7 367192 sc-eQTL 8.99e-02 -0.15 0.0882 0.587 NK_CD56bright L2
ENSG00000112378 PERP -917663 sc-eQTL 4.88e-01 0.0552 0.0795 0.587 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 6.90e-01 -0.0203 0.0507 0.587 NK_CD56bright L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 8.56e-02 -0.132 0.0766 0.587 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 2.10e-02 -0.186 0.0798 0.587 NK_CD56bright L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 1.45e-03 0.167 0.0517 0.591 NK_CD56dim L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 5.83e-01 0.0191 0.0346 0.591 NK_CD56dim L2
ENSG00000112357 PEX7 367192 sc-eQTL 8.20e-01 -0.0208 0.0913 0.591 NK_CD56dim L2
ENSG00000112378 PERP -917663 sc-eQTL 9.25e-01 -0.00606 0.0642 0.591 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 2.07e-01 -0.063 0.0497 0.591 NK_CD56dim L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 3.02e-01 -0.0742 0.0717 0.591 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 9.38e-01 0.00581 0.0748 0.591 NK_CD56dim L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 1.92e-02 0.16 0.0676 0.58 NK_HLA L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 2.73e-01 0.0637 0.0579 0.58 NK_HLA L2
ENSG00000112357 PEX7 367192 sc-eQTL 4.36e-01 -0.0678 0.0869 0.58 NK_HLA L2
ENSG00000112378 PERP -917663 sc-eQTL 1.83e-01 -0.0939 0.0703 0.58 NK_HLA L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 6.40e-01 0.0254 0.0543 0.58 NK_HLA L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 8.65e-02 -0.148 0.0857 0.58 NK_HLA L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 2.40e-01 -0.103 0.0872 0.58 NK_HLA L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 1.31e-03 0.178 0.0547 0.591 NK_cytokine L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 7.79e-01 0.0117 0.0419 0.591 NK_cytokine L2
ENSG00000112357 PEX7 367192 sc-eQTL 6.23e-01 -0.0433 0.088 0.591 NK_cytokine L2
ENSG00000112378 PERP -917663 sc-eQTL 5.33e-01 -0.0417 0.0668 0.591 NK_cytokine L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 5.59e-01 -0.0293 0.05 0.591 NK_cytokine L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 2.59e-01 -0.0777 0.0686 0.591 NK_cytokine L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 7.96e-02 -0.132 0.0749 0.591 NK_cytokine L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 3.94e-01 0.0986 0.115 0.578 PB L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 9.49e-01 0.00633 0.0996 0.578 PB L2
ENSG00000112357 PEX7 367192 sc-eQTL 9.28e-01 0.0107 0.119 0.578 PB L2
ENSG00000112378 PERP -917663 sc-eQTL 8.23e-01 -0.0166 0.074 0.578 PB L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 9.05e-01 0.0108 0.0898 0.578 PB L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 8.13e-03 0.267 0.0991 0.578 PB L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 3.37e-02 0.227 0.106 0.578 PB L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 8.33e-01 -0.0148 0.0698 0.591 Pro_T L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 7.40e-01 0.0241 0.0724 0.591 Pro_T L2
ENSG00000112357 PEX7 367192 sc-eQTL 8.77e-01 0.0132 0.0848 0.591 Pro_T L2
ENSG00000112378 PERP -917663 sc-eQTL 6.12e-01 -0.0343 0.0674 0.591 Pro_T L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 1.89e-01 -0.0558 0.0424 0.591 Pro_T L2
ENSG00000146410 MTFR2 939421 sc-eQTL 1.27e-01 0.0898 0.0586 0.591 Pro_T L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 4.59e-01 -0.0611 0.0823 0.591 Pro_T L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 2.26e-01 0.0999 0.0823 0.591 Pro_T L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 3.14e-02 0.175 0.0809 0.592 Treg L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 3.29e-01 -0.0516 0.0527 0.592 Treg L2
ENSG00000112357 PEX7 367192 sc-eQTL 8.97e-02 0.146 0.0858 0.592 Treg L2
ENSG00000112378 PERP -917663 sc-eQTL 1.07e-01 0.15 0.0929 0.592 Treg L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 8.66e-01 0.00877 0.052 0.592 Treg L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 5.76e-01 0.0315 0.0563 0.592 Treg L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 4.22e-01 -0.0638 0.0792 0.592 Treg L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 2.56e-01 0.0802 0.0704 0.588 cDC L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 4.69e-01 0.0516 0.0711 0.588 cDC L2
ENSG00000112357 PEX7 367192 sc-eQTL 1.72e-01 -0.125 0.0909 0.588 cDC L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 3.44e-01 -0.0659 0.0695 0.588 cDC L2
ENSG00000135525 MAP7 638937 sc-eQTL 4.50e-01 0.0615 0.0813 0.588 cDC L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 4.30e-01 0.0566 0.0715 0.588 cDC L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 2.38e-01 0.107 0.0904 0.588 cDC L2
ENSG00000286646 AL121933.2 405711 sc-eQTL 1.39e-02 -0.228 0.0918 0.588 cDC L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 1.02e-05 0.209 0.0463 0.592 cMono_IL1B L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 7.85e-01 -0.0142 0.052 0.592 cMono_IL1B L2
ENSG00000112357 PEX7 367192 sc-eQTL 2.14e-02 0.2 0.0861 0.592 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 9.26e-01 -0.00483 0.0522 0.592 cMono_IL1B L2
ENSG00000135525 MAP7 638937 sc-eQTL 9.21e-01 -0.00749 0.0751 0.592 cMono_IL1B L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 9.05e-01 -0.0065 0.0542 0.592 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 5.89e-01 -0.0301 0.0557 0.592 cMono_IL1B L2
ENSG00000286646 AL121933.2 405711 sc-eQTL 7.22e-01 -0.0248 0.0697 0.592 cMono_IL1B L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 1.98e-03 0.173 0.0551 0.592 cMono_S100A L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 1.19e-01 0.0902 0.0576 0.592 cMono_S100A L2
ENSG00000112357 PEX7 367192 sc-eQTL 3.74e-01 0.0804 0.0903 0.592 cMono_S100A L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 7.66e-01 0.0149 0.0501 0.592 cMono_S100A L2
ENSG00000135525 MAP7 638937 sc-eQTL 2.38e-01 0.0994 0.0841 0.592 cMono_S100A L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 3.07e-01 -0.0695 0.0679 0.592 cMono_S100A L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 8.23e-01 0.0161 0.0719 0.592 cMono_S100A L2
ENSG00000286646 AL121933.2 405711 sc-eQTL 4.30e-01 -0.0554 0.0701 0.592 cMono_S100A L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 6.89e-02 0.15 0.0821 0.582 gdT L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 9.19e-01 0.00747 0.0731 0.582 gdT L2
ENSG00000112357 PEX7 367192 sc-eQTL 8.80e-01 -0.0159 0.105 0.582 gdT L2
ENSG00000112378 PERP -917663 sc-eQTL 1.87e-01 0.121 0.0913 0.582 gdT L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 2.96e-01 0.0534 0.0509 0.582 gdT L2
ENSG00000146410 MTFR2 939421 sc-eQTL 3.26e-02 0.171 0.0793 0.582 gdT L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 5.64e-01 -0.0623 0.108 0.582 gdT L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 6.78e-01 -0.0385 0.0925 0.582 gdT L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 7.57e-02 0.106 0.0594 0.589 intMono L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 9.05e-01 0.00945 0.079 0.589 intMono L2
ENSG00000112357 PEX7 367192 sc-eQTL 8.47e-01 0.0156 0.0806 0.589 intMono L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 8.40e-01 0.0104 0.0517 0.589 intMono L2
ENSG00000135525 MAP7 638937 sc-eQTL 4.55e-02 -0.158 0.0786 0.589 intMono L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 7.19e-01 -0.0303 0.084 0.589 intMono L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 7.23e-01 0.0274 0.077 0.589 intMono L2
ENSG00000286646 AL121933.2 405711 sc-eQTL 2.37e-01 0.105 0.0885 0.589 intMono L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 4.44e-05 0.281 0.0672 0.593 ncMono L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 2.69e-01 0.0602 0.0543 0.593 ncMono L2
ENSG00000112357 PEX7 367192 sc-eQTL 7.86e-01 -0.0236 0.0868 0.593 ncMono L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 5.81e-01 0.0343 0.062 0.593 ncMono L2
ENSG00000135525 MAP7 638937 sc-eQTL 5.73e-01 -0.0433 0.0766 0.593 ncMono L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 2.00e-01 -0.103 0.0803 0.593 ncMono L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 9.78e-01 -0.00217 0.0776 0.593 ncMono L2
ENSG00000286646 AL121933.2 405711 sc-eQTL 2.31e-01 -0.098 0.0815 0.593 ncMono L2
ENSG00000027697 IFNGR1 -29693 sc-eQTL 2.46e-01 0.0961 0.0824 0.605 pDC L2
ENSG00000029363 BCLAF1 899905 sc-eQTL 3.99e-02 -0.127 0.0613 0.605 pDC L2
ENSG00000112357 PEX7 367192 sc-eQTL 2.31e-01 -0.109 0.0907 0.605 pDC L2
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 4.69e-01 -0.0556 0.0766 0.605 pDC L2
ENSG00000135525 MAP7 638937 sc-eQTL 1.33e-01 -0.0953 0.0632 0.605 pDC L2
ENSG00000197442 MAP3K5 397279 sc-eQTL 9.33e-01 0.00862 0.102 0.605 pDC L2
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 9.69e-01 -0.00306 0.0779 0.605 pDC L2
ENSG00000286646 AL121933.2 405711 sc-eQTL 8.01e-01 -0.0238 0.0939 0.605 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -29693 sc-eQTL 2.35e-02 0.162 0.0708 0.592 B_Memory LOneK1K
ENSG00000029363 BCLAF1 899905 sc-eQTL 5.78e-01 -0.0224 0.0402 0.592 B_Memory LOneK1K
ENSG00000112357 PEX7 367192 sc-eQTL 1.31e-01 -0.124 0.0819 0.592 B_Memory LOneK1K
ENSG00000112378 PERP -917663 sc-eQTL 9.47e-01 -0.0051 0.0766 0.592 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 8.84e-01 0.00741 0.0505 0.592 B_Memory LOneK1K
ENSG00000197442 MAP3K5 397279 sc-eQTL 4.47e-02 -0.134 0.0663 0.592 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 3.58e-01 -0.0785 0.0853 0.592 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -29693 sc-eQTL 4.39e-01 0.0563 0.0726 0.592 B_Naive LOneK1K
ENSG00000029363 BCLAF1 899905 sc-eQTL 7.67e-01 -0.00991 0.0334 0.592 B_Naive LOneK1K
ENSG00000112357 PEX7 367192 sc-eQTL 8.47e-01 -0.017 0.0885 0.592 B_Naive LOneK1K
ENSG00000112378 PERP -917663 sc-eQTL 7.38e-01 -0.0265 0.0792 0.592 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 7.43e-01 -0.0137 0.0416 0.592 B_Naive LOneK1K
ENSG00000197442 MAP3K5 397279 sc-eQTL 9.88e-01 0.000942 0.061 0.592 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 3.34e-01 -0.0717 0.0739 0.592 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -29693 sc-eQTL 8.73e-06 0.212 0.0466 0.592 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 899905 sc-eQTL 8.24e-01 0.0101 0.0455 0.592 CD14_Mono LOneK1K
ENSG00000112357 PEX7 367192 sc-eQTL 5.79e-02 0.166 0.0869 0.592 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 8.45e-01 -0.00885 0.0452 0.592 CD14_Mono LOneK1K
ENSG00000135525 MAP7 638937 sc-eQTL 3.33e-01 0.0758 0.0782 0.592 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 397279 sc-eQTL 6.46e-01 -0.0243 0.0529 0.592 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 9.74e-01 -0.0018 0.0541 0.592 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 405711 sc-eQTL 3.83e-01 -0.055 0.0629 0.592 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -29693 sc-eQTL 2.20e-04 0.211 0.0561 0.591 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 899905 sc-eQTL 2.59e-01 0.059 0.0522 0.591 CD16_Mono LOneK1K
ENSG00000112357 PEX7 367192 sc-eQTL 9.20e-01 -0.00882 0.0874 0.591 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 9.12e-01 -0.00599 0.0541 0.591 CD16_Mono LOneK1K
ENSG00000135525 MAP7 638937 sc-eQTL 6.41e-02 -0.156 0.0838 0.591 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 397279 sc-eQTL 4.13e-01 -0.0569 0.0693 0.591 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 9.91e-01 0.000857 0.0725 0.591 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 405711 sc-eQTL 8.23e-01 -0.0184 0.0823 0.591 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -29693 sc-eQTL 1.99e-03 0.166 0.0532 0.591 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 899905 sc-eQTL 6.52e-01 0.0142 0.0316 0.591 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 367192 sc-eQTL 4.35e-01 -0.0716 0.0916 0.591 NK_CD56dim LOneK1K
ENSG00000112378 PERP -917663 sc-eQTL 9.78e-02 -0.094 0.0565 0.591 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -677458 sc-eQTL 4.26e-01 -0.0395 0.0495 0.591 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 397279 sc-eQTL 1.94e-01 -0.0869 0.0667 0.591 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -678477 sc-eQTL 2.76e-01 -0.0756 0.0692 0.591 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -29693 pQTL 4.67e-08 0.0881 0.016 0.0 0.0 0.443
ENSG00000027697 IFNGR1 -29693 eQTL 1.7100000000000001e-29 0.149 0.0128 0.0 0.0 0.451
ENSG00000135525 MAP7 638937 eQTL 0.0345 -0.0506 0.0239 0.00108 0.0 0.451

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -29693 1.36e-05 1.26e-05 2.32e-06 7.6e-06 2.34e-06 6.22e-06 1.57e-05 2.14e-06 1.09e-05 6e-06 1.58e-05 6.72e-06 2.09e-05 4.48e-06 4.15e-06 7.36e-06 6.68e-06 1.11e-05 3.37e-06 3.23e-06 6.66e-06 1.22e-05 1.2e-05 4.28e-06 2.14e-05 4.71e-06 6.68e-06 5.2e-06 1.37e-05 1.33e-05 7.58e-06 9.89e-07 1.21e-06 3.91e-06 5.87e-06 2.87e-06 1.78e-06 1.99e-06 2.24e-06 1.56e-06 1.29e-06 1.58e-05 1.61e-06 2.22e-07 9.58e-07 2.08e-06 1.99e-06 6.86e-07 4.15e-07
ENSG00000112357 \N 367192 1.22e-06 6.97e-07 1.48e-07 4.35e-07 9.61e-08 3.08e-07 7.1e-07 1.76e-07 6.53e-07 3.1e-07 1.03e-06 5.15e-07 1.05e-06 1.76e-07 3.16e-07 3.57e-07 5.41e-07 4.52e-07 2.88e-07 2.27e-07 2.49e-07 5.34e-07 4.77e-07 3.01e-07 1.39e-06 2.64e-07 4.27e-07 3.62e-07 5.7e-07 8.4e-07 3.81e-07 4.75e-08 9.26e-08 2.06e-07 3.63e-07 1.49e-07 1.11e-07 9.84e-08 7.5e-08 8.43e-09 1.95e-07 7.38e-07 5.09e-08 5.61e-09 1.69e-07 3.92e-08 1.46e-07 2.41e-08 4.97e-08
ENSG00000135525 MAP7 638937 3.71e-07 1.53e-07 6.15e-08 2.15e-07 9.94e-08 7.75e-08 2.4e-07 5.62e-08 1.59e-07 9.35e-08 1.61e-07 1.23e-07 2.24e-07 8e-08 5.36e-08 8.71e-08 4.31e-08 1.8e-07 7.16e-08 5.48e-08 1.18e-07 1.56e-07 1.68e-07 3.59e-08 2.17e-07 1.31e-07 1.2e-07 1.1e-07 1.32e-07 1.24e-07 1.14e-07 4.47e-08 4.37e-08 9.81e-08 3.57e-08 2.68e-08 5.51e-08 8.57e-08 6.28e-08 5.45e-08 5.1e-08 1.55e-07 4.17e-08 1.09e-08 3.29e-08 1.01e-08 7.97e-08 2e-09 4.8e-08