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Genes within 1Mb (chr6:137187888:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -31561 sc-eQTL 1.32e-01 0.105 0.0694 0.632 B L1
ENSG00000029363 BCLAF1 898037 sc-eQTL 2.04e-01 -0.0394 0.0309 0.632 B L1
ENSG00000112357 PEX7 365324 sc-eQTL 9.17e-01 -0.00865 0.0826 0.632 B L1
ENSG00000112378 PERP -919531 sc-eQTL 4.44e-01 -0.0418 0.0546 0.632 B L1
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 3.66e-01 -0.0398 0.0439 0.632 B L1
ENSG00000197442 MAP3K5 395411 sc-eQTL 6.88e-01 -0.0247 0.0613 0.632 B L1
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 1.78e-01 -0.0932 0.069 0.632 B L1
ENSG00000027697 IFNGR1 -31561 sc-eQTL 7.19e-04 0.156 0.0455 0.632 CD4T L1
ENSG00000029363 BCLAF1 898037 sc-eQTL 3.14e-02 -0.0757 0.035 0.632 CD4T L1
ENSG00000112357 PEX7 365324 sc-eQTL 1.28e-02 0.186 0.0741 0.632 CD4T L1
ENSG00000112378 PERP -919531 sc-eQTL 5.29e-02 0.0974 0.0501 0.632 CD4T L1
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 7.00e-01 -0.0182 0.0473 0.632 CD4T L1
ENSG00000197442 MAP3K5 395411 sc-eQTL 1.59e-01 -0.0507 0.0359 0.632 CD4T L1
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 4.36e-02 -0.12 0.059 0.632 CD4T L1
ENSG00000027697 IFNGR1 -31561 sc-eQTL 1.08e-02 0.134 0.052 0.632 CD8T L1
ENSG00000029363 BCLAF1 898037 sc-eQTL 8.54e-01 -0.00657 0.0358 0.632 CD8T L1
ENSG00000112357 PEX7 365324 sc-eQTL 7.53e-01 0.0278 0.0881 0.632 CD8T L1
ENSG00000112378 PERP -919531 sc-eQTL 2.94e-01 -0.0605 0.0575 0.632 CD8T L1
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 9.02e-01 -0.00547 0.0445 0.632 CD8T L1
ENSG00000197442 MAP3K5 395411 sc-eQTL 2.80e-01 -0.0507 0.0469 0.632 CD8T L1
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 8.99e-01 -0.00827 0.0653 0.632 CD8T L1
ENSG00000027697 IFNGR1 -31561 sc-eQTL 1.58e-01 0.0907 0.0639 0.631 DC L1
ENSG00000029363 BCLAF1 898037 sc-eQTL 4.81e-01 -0.0407 0.0577 0.631 DC L1
ENSG00000112357 PEX7 365324 sc-eQTL 2.23e-02 -0.206 0.0893 0.631 DC L1
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 8.33e-01 -0.0145 0.0686 0.631 DC L1
ENSG00000135525 MAP7 637069 sc-eQTL 7.99e-01 0.019 0.0743 0.631 DC L1
ENSG00000197442 MAP3K5 395411 sc-eQTL 3.66e-01 0.0644 0.0711 0.631 DC L1
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 6.24e-01 0.0343 0.0699 0.631 DC L1
ENSG00000286646 AL121933.2 403843 sc-eQTL 8.58e-02 -0.159 0.0923 0.631 DC L1
ENSG00000027697 IFNGR1 -31561 sc-eQTL 6.67e-05 0.208 0.0512 0.632 Mono L1
ENSG00000029363 BCLAF1 898037 sc-eQTL 7.41e-01 0.015 0.0454 0.632 Mono L1
ENSG00000112357 PEX7 365324 sc-eQTL 6.95e-02 0.162 0.0888 0.632 Mono L1
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 9.17e-01 -0.00473 0.0451 0.632 Mono L1
ENSG00000135525 MAP7 637069 sc-eQTL 8.18e-01 0.0182 0.0789 0.632 Mono L1
ENSG00000197442 MAP3K5 395411 sc-eQTL 6.03e-01 -0.0274 0.0526 0.632 Mono L1
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 7.64e-01 0.0168 0.0559 0.632 Mono L1
ENSG00000286646 AL121933.2 403843 sc-eQTL 8.33e-01 -0.0135 0.0637 0.632 Mono L1
ENSG00000027697 IFNGR1 -31561 sc-eQTL 2.02e-02 0.137 0.0585 0.633 NK L1
ENSG00000029363 BCLAF1 898037 sc-eQTL 6.61e-01 0.0138 0.0315 0.633 NK L1
ENSG00000112357 PEX7 365324 sc-eQTL 1.22e-01 -0.141 0.091 0.633 NK L1
ENSG00000112378 PERP -919531 sc-eQTL 2.86e-01 -0.0615 0.0575 0.633 NK L1
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 4.11e-01 -0.0406 0.0493 0.633 NK L1
ENSG00000197442 MAP3K5 395411 sc-eQTL 7.29e-02 -0.126 0.0702 0.633 NK L1
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 2.19e-01 -0.0859 0.0697 0.633 NK L1
ENSG00000027697 IFNGR1 -31561 sc-eQTL 5.45e-01 0.0338 0.0558 0.632 Other_T L1
ENSG00000029363 BCLAF1 898037 sc-eQTL 8.42e-01 -0.00938 0.0468 0.632 Other_T L1
ENSG00000112357 PEX7 365324 sc-eQTL 8.66e-01 -0.0153 0.0911 0.632 Other_T L1
ENSG00000112378 PERP -919531 sc-eQTL 1.37e-01 0.109 0.0727 0.632 Other_T L1
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 9.40e-01 -0.00262 0.0348 0.632 Other_T L1
ENSG00000146410 MTFR2 937553 sc-eQTL 8.60e-01 0.00929 0.0527 0.632 Other_T L1
ENSG00000197442 MAP3K5 395411 sc-eQTL 1.72e-01 -0.0916 0.0668 0.632 Other_T L1
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 7.09e-01 0.0258 0.069 0.632 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -31561 sc-eQTL 3.21e-01 0.0935 0.094 0.64 B_Activated L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 7.86e-01 -0.0208 0.0765 0.64 B_Activated L2
ENSG00000112357 PEX7 365324 sc-eQTL 2.62e-01 0.104 0.0924 0.64 B_Activated L2
ENSG00000112378 PERP -919531 sc-eQTL 7.04e-01 -0.0183 0.048 0.64 B_Activated L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 5.55e-01 -0.0549 0.093 0.64 B_Activated L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 1.54e-01 -0.148 0.104 0.64 B_Activated L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 2.22e-02 -0.185 0.0801 0.64 B_Activated L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 2.94e-01 0.0868 0.0825 0.635 B_Intermediate L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 1.84e-01 -0.0625 0.0469 0.635 B_Intermediate L2
ENSG00000112357 PEX7 365324 sc-eQTL 2.94e-01 -0.0909 0.0863 0.635 B_Intermediate L2
ENSG00000112378 PERP -919531 sc-eQTL 8.14e-01 0.0185 0.0789 0.635 B_Intermediate L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 9.86e-01 0.00107 0.0619 0.635 B_Intermediate L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 6.59e-02 -0.137 0.0742 0.635 B_Intermediate L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 2.39e-01 -0.103 0.0875 0.635 B_Intermediate L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 4.36e-01 0.071 0.0911 0.631 B_Memory L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 5.51e-01 -0.0324 0.0541 0.631 B_Memory L2
ENSG00000112357 PEX7 365324 sc-eQTL 1.66e-01 -0.127 0.0917 0.631 B_Memory L2
ENSG00000112378 PERP -919531 sc-eQTL 9.19e-01 -0.00887 0.0867 0.631 B_Memory L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 6.71e-01 -0.0254 0.0596 0.631 B_Memory L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 8.97e-01 -0.0106 0.0815 0.631 B_Memory L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 9.58e-01 0.00466 0.0888 0.631 B_Memory L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 1.77e-01 0.0952 0.0702 0.632 B_Naive1 L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 5.17e-01 -0.0261 0.0403 0.632 B_Naive1 L2
ENSG00000112357 PEX7 365324 sc-eQTL 9.95e-01 -0.000576 0.0931 0.632 B_Naive1 L2
ENSG00000112378 PERP -919531 sc-eQTL 5.17e-01 0.0528 0.0813 0.632 B_Naive1 L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 6.37e-01 -0.0223 0.0472 0.632 B_Naive1 L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 5.85e-01 0.0363 0.0663 0.632 B_Naive1 L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 2.61e-01 -0.0831 0.0737 0.632 B_Naive1 L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 3.04e-01 -0.0885 0.086 0.633 B_Naive2 L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 4.73e-01 -0.0359 0.0499 0.633 B_Naive2 L2
ENSG00000112357 PEX7 365324 sc-eQTL 8.94e-01 0.0126 0.0943 0.633 B_Naive2 L2
ENSG00000112378 PERP -919531 sc-eQTL 2.84e-01 -0.0736 0.0685 0.633 B_Naive2 L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 8.67e-01 -0.0115 0.0686 0.633 B_Naive2 L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 3.20e-01 -0.0726 0.0729 0.633 B_Naive2 L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 4.52e-01 -0.0667 0.0886 0.633 B_Naive2 L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 4.91e-01 0.0557 0.0808 0.636 CD4_CTL L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 3.21e-01 -0.0713 0.0716 0.636 CD4_CTL L2
ENSG00000112357 PEX7 365324 sc-eQTL 4.18e-01 0.0726 0.0895 0.636 CD4_CTL L2
ENSG00000112378 PERP -919531 sc-eQTL 5.69e-01 0.0518 0.0908 0.636 CD4_CTL L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 2.73e-01 -0.0581 0.0529 0.636 CD4_CTL L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 1.83e-01 -0.113 0.0842 0.636 CD4_CTL L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 9.38e-01 0.00643 0.0825 0.636 CD4_CTL L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 5.10e-02 0.0858 0.0437 0.632 CD4_Naive L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 9.05e-02 -0.0598 0.0352 0.632 CD4_Naive L2
ENSG00000112357 PEX7 365324 sc-eQTL 1.38e-02 0.204 0.0821 0.632 CD4_Naive L2
ENSG00000112378 PERP -919531 sc-eQTL 7.09e-02 0.124 0.0682 0.632 CD4_Naive L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 9.63e-01 0.00224 0.0482 0.632 CD4_Naive L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 1.36e-01 -0.0528 0.0352 0.632 CD4_Naive L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 2.85e-02 -0.136 0.0618 0.632 CD4_Naive L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 2.34e-02 0.142 0.0622 0.632 CD4_TCM L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 1.30e-01 -0.0601 0.0395 0.632 CD4_TCM L2
ENSG00000112357 PEX7 365324 sc-eQTL 4.31e-01 0.0728 0.0923 0.632 CD4_TCM L2
ENSG00000112378 PERP -919531 sc-eQTL 2.66e-01 0.0868 0.0779 0.632 CD4_TCM L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 4.74e-01 -0.0325 0.0453 0.632 CD4_TCM L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 9.87e-01 -0.000845 0.0517 0.632 CD4_TCM L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 9.42e-01 -0.00463 0.0636 0.632 CD4_TCM L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 1.42e-02 0.172 0.0695 0.632 CD4_TEM L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 1.31e-01 -0.0753 0.0497 0.632 CD4_TEM L2
ENSG00000112357 PEX7 365324 sc-eQTL 4.03e-01 0.0762 0.0909 0.632 CD4_TEM L2
ENSG00000112378 PERP -919531 sc-eQTL 4.04e-01 0.0616 0.0737 0.632 CD4_TEM L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 7.77e-01 -0.0133 0.0469 0.632 CD4_TEM L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 1.31e-01 -0.109 0.072 0.632 CD4_TEM L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 8.59e-01 -0.0133 0.0751 0.632 CD4_TEM L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 3.69e-02 0.13 0.0621 0.632 CD8_CTL L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 1.53e-01 -0.0597 0.0416 0.632 CD8_CTL L2
ENSG00000112357 PEX7 365324 sc-eQTL 6.54e-01 -0.0387 0.0863 0.632 CD8_CTL L2
ENSG00000112378 PERP -919531 sc-eQTL 7.06e-02 -0.15 0.0824 0.632 CD8_CTL L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 3.14e-01 -0.0531 0.0527 0.632 CD8_CTL L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 3.51e-01 -0.0695 0.0744 0.632 CD8_CTL L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 8.10e-01 0.0179 0.0742 0.632 CD8_CTL L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 9.99e-03 0.162 0.0623 0.632 CD8_Naive L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 5.16e-01 0.0287 0.0441 0.632 CD8_Naive L2
ENSG00000112357 PEX7 365324 sc-eQTL 2.97e-01 0.0956 0.0914 0.632 CD8_Naive L2
ENSG00000112378 PERP -919531 sc-eQTL 1.61e-01 0.0977 0.0694 0.632 CD8_Naive L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 7.79e-01 0.0139 0.0495 0.632 CD8_Naive L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 1.87e-02 -0.137 0.0579 0.632 CD8_Naive L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 5.92e-01 -0.0392 0.0731 0.632 CD8_Naive L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 1.72e-01 0.115 0.0841 0.639 CD8_TCM L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 6.24e-01 -0.0311 0.0634 0.639 CD8_TCM L2
ENSG00000112357 PEX7 365324 sc-eQTL 9.26e-01 0.00906 0.097 0.639 CD8_TCM L2
ENSG00000112378 PERP -919531 sc-eQTL 6.21e-01 -0.047 0.0949 0.639 CD8_TCM L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 2.67e-01 -0.0508 0.0456 0.639 CD8_TCM L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 4.75e-01 -0.0584 0.0816 0.639 CD8_TCM L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 3.57e-02 0.175 0.0828 0.639 CD8_TCM L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 5.11e-01 0.0522 0.0793 0.642 CD8_TEM L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 3.66e-01 -0.0678 0.0748 0.642 CD8_TEM L2
ENSG00000112357 PEX7 365324 sc-eQTL 7.46e-01 0.0296 0.0914 0.642 CD8_TEM L2
ENSG00000112378 PERP -919531 sc-eQTL 8.58e-02 0.163 0.0943 0.642 CD8_TEM L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 9.80e-01 0.0015 0.0586 0.642 CD8_TEM L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 1.20e-01 -0.141 0.09 0.642 CD8_TEM L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 6.41e-01 -0.0405 0.0868 0.642 CD8_TEM L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 2.96e-01 0.0674 0.0644 0.632 MAIT L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 3.33e-01 -0.0519 0.0535 0.632 MAIT L2
ENSG00000112357 PEX7 365324 sc-eQTL 5.70e-01 -0.0497 0.0874 0.632 MAIT L2
ENSG00000112378 PERP -919531 sc-eQTL 1.89e-02 0.213 0.09 0.632 MAIT L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 5.06e-01 -0.0289 0.0434 0.632 MAIT L2
ENSG00000146410 MTFR2 937553 sc-eQTL 1.57e-01 -0.102 0.072 0.632 MAIT L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 2.15e-01 -0.0938 0.0754 0.632 MAIT L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 9.73e-01 0.00273 0.0803 0.632 MAIT L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 1.95e-01 0.0899 0.0692 0.627 NK_CD56bright L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 2.84e-01 -0.0549 0.0511 0.627 NK_CD56bright L2
ENSG00000112357 PEX7 365324 sc-eQTL 1.45e-01 -0.132 0.0901 0.627 NK_CD56bright L2
ENSG00000112378 PERP -919531 sc-eQTL 3.24e-01 0.0799 0.0809 0.627 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 7.61e-01 -0.0157 0.0517 0.627 NK_CD56bright L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 4.50e-02 -0.157 0.0779 0.627 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 4.61e-03 -0.232 0.0808 0.627 NK_CD56bright L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 2.24e-02 0.124 0.0539 0.631 NK_CD56dim L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 2.54e-01 0.0407 0.0356 0.631 NK_CD56dim L2
ENSG00000112357 PEX7 365324 sc-eQTL 6.72e-01 -0.0399 0.094 0.631 NK_CD56dim L2
ENSG00000112378 PERP -919531 sc-eQTL 8.07e-01 0.0162 0.0661 0.631 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 3.60e-01 -0.0471 0.0513 0.631 NK_CD56dim L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 1.17e-01 -0.116 0.0736 0.631 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 9.35e-01 0.00626 0.077 0.631 NK_CD56dim L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 5.17e-02 0.137 0.0699 0.619 NK_HLA L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 4.38e-01 0.0464 0.0597 0.619 NK_HLA L2
ENSG00000112357 PEX7 365324 sc-eQTL 4.88e-01 -0.0622 0.0895 0.619 NK_HLA L2
ENSG00000112378 PERP -919531 sc-eQTL 1.14e-01 -0.115 0.0722 0.619 NK_HLA L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 8.11e-01 0.0134 0.0559 0.619 NK_HLA L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 9.19e-02 -0.149 0.0882 0.619 NK_HLA L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 1.31e-01 -0.136 0.0896 0.619 NK_HLA L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 9.20e-03 0.149 0.0566 0.631 NK_cytokine L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 9.97e-01 0.000188 0.0429 0.631 NK_cytokine L2
ENSG00000112357 PEX7 365324 sc-eQTL 6.82e-01 -0.037 0.0902 0.631 NK_cytokine L2
ENSG00000112378 PERP -919531 sc-eQTL 4.72e-01 -0.0493 0.0684 0.631 NK_cytokine L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 3.95e-01 -0.0437 0.0512 0.631 NK_cytokine L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 2.00e-01 -0.0903 0.0703 0.631 NK_cytokine L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 1.46e-01 -0.112 0.077 0.631 NK_cytokine L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 3.42e-01 0.108 0.113 0.615 PB L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 8.87e-01 -0.014 0.0983 0.615 PB L2
ENSG00000112357 PEX7 365324 sc-eQTL 6.64e-01 0.051 0.117 0.615 PB L2
ENSG00000112378 PERP -919531 sc-eQTL 9.11e-01 -0.00822 0.073 0.615 PB L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 1.00e+00 -2.45e-05 0.0886 0.615 PB L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 5.08e-02 0.196 0.0991 0.615 PB L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 7.05e-02 0.191 0.105 0.615 PB L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 9.63e-01 -0.00334 0.0717 0.633 Pro_T L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 8.14e-01 -0.0175 0.0743 0.633 Pro_T L2
ENSG00000112357 PEX7 365324 sc-eQTL 5.88e-01 0.0472 0.087 0.633 Pro_T L2
ENSG00000112378 PERP -919531 sc-eQTL 9.63e-01 -0.00318 0.0692 0.633 Pro_T L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 2.18e-01 -0.0538 0.0435 0.633 Pro_T L2
ENSG00000146410 MTFR2 937553 sc-eQTL 3.64e-01 0.055 0.0604 0.633 Pro_T L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 2.66e-01 -0.0939 0.0843 0.633 Pro_T L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 1.56e-01 0.12 0.0843 0.633 Pro_T L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 8.18e-02 0.145 0.0831 0.632 Treg L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 4.97e-02 -0.106 0.0536 0.632 Treg L2
ENSG00000112357 PEX7 365324 sc-eQTL 1.25e-01 0.135 0.088 0.632 Treg L2
ENSG00000112378 PERP -919531 sc-eQTL 1.08e-01 0.153 0.0951 0.632 Treg L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 8.42e-01 -0.0106 0.0532 0.632 Treg L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 3.90e-01 0.0496 0.0576 0.632 Treg L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 2.06e-01 -0.103 0.0809 0.632 Treg L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 4.32e-01 0.0564 0.0717 0.629 cDC L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 3.38e-01 0.0693 0.0722 0.629 cDC L2
ENSG00000112357 PEX7 365324 sc-eQTL 1.46e-01 -0.135 0.0923 0.629 cDC L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 4.19e-01 -0.0573 0.0707 0.629 cDC L2
ENSG00000135525 MAP7 637069 sc-eQTL 5.31e-01 0.0519 0.0827 0.629 cDC L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 1.67e-01 0.101 0.0724 0.629 cDC L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 1.23e-01 0.142 0.0916 0.629 cDC L2
ENSG00000286646 AL121933.2 403843 sc-eQTL 3.13e-02 -0.203 0.0936 0.629 cDC L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 2.31e-04 0.18 0.048 0.632 cMono_IL1B L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 7.47e-01 0.0171 0.0532 0.632 cMono_IL1B L2
ENSG00000112357 PEX7 365324 sc-eQTL 1.81e-02 0.21 0.088 0.632 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 9.41e-01 0.00396 0.0534 0.632 cMono_IL1B L2
ENSG00000135525 MAP7 637069 sc-eQTL 7.52e-01 -0.0243 0.0768 0.632 cMono_IL1B L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 6.33e-01 0.0266 0.0555 0.632 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 7.87e-01 -0.0154 0.057 0.632 cMono_IL1B L2
ENSG00000286646 AL121933.2 403843 sc-eQTL 9.62e-01 -0.00338 0.0714 0.632 cMono_IL1B L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 1.39e-02 0.14 0.0566 0.632 cMono_S100A L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 7.42e-02 0.105 0.0585 0.632 cMono_S100A L2
ENSG00000112357 PEX7 365324 sc-eQTL 2.36e-01 0.109 0.0918 0.632 cMono_S100A L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 5.34e-01 0.0318 0.051 0.632 cMono_S100A L2
ENSG00000135525 MAP7 637069 sc-eQTL 1.93e-01 0.112 0.0856 0.632 cMono_S100A L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 3.39e-01 -0.0663 0.0692 0.632 cMono_S100A L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 9.36e-01 -0.00586 0.0733 0.632 cMono_S100A L2
ENSG00000286646 AL121933.2 403843 sc-eQTL 6.36e-01 -0.0339 0.0715 0.632 cMono_S100A L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 1.77e-01 0.117 0.0859 0.624 gdT L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 8.49e-01 0.0145 0.0761 0.624 gdT L2
ENSG00000112357 PEX7 365324 sc-eQTL 9.87e-01 0.00175 0.11 0.624 gdT L2
ENSG00000112378 PERP -919531 sc-eQTL 7.53e-02 0.169 0.0946 0.624 gdT L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 2.52e-01 0.0609 0.0529 0.624 gdT L2
ENSG00000146410 MTFR2 937553 sc-eQTL 2.04e-02 0.193 0.0823 0.624 gdT L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 4.11e-01 -0.0926 0.112 0.624 gdT L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 5.84e-01 -0.0528 0.0962 0.624 gdT L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 4.53e-02 0.122 0.0605 0.631 intMono L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 7.54e-01 0.0253 0.0806 0.631 intMono L2
ENSG00000112357 PEX7 365324 sc-eQTL 9.71e-01 0.00295 0.0823 0.631 intMono L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 5.37e-01 0.0326 0.0527 0.631 intMono L2
ENSG00000135525 MAP7 637069 sc-eQTL 2.01e-01 -0.104 0.0807 0.631 intMono L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 4.26e-01 -0.0683 0.0857 0.631 intMono L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 6.75e-01 0.033 0.0786 0.631 intMono L2
ENSG00000286646 AL121933.2 403843 sc-eQTL 7.35e-01 0.0307 0.0906 0.631 intMono L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 7.42e-04 0.237 0.0693 0.633 ncMono L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 4.33e-01 0.0435 0.0553 0.633 ncMono L2
ENSG00000112357 PEX7 365324 sc-eQTL 8.34e-01 -0.0185 0.0883 0.633 ncMono L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 4.29e-01 0.0499 0.063 0.633 ncMono L2
ENSG00000135525 MAP7 637069 sc-eQTL 6.54e-01 -0.035 0.0779 0.633 ncMono L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 2.99e-01 -0.0851 0.0818 0.633 ncMono L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 8.68e-01 -0.0131 0.0789 0.633 ncMono L2
ENSG00000286646 AL121933.2 403843 sc-eQTL 2.39e-01 -0.0979 0.0829 0.633 ncMono L2
ENSG00000027697 IFNGR1 -31561 sc-eQTL 7.62e-01 0.0254 0.0839 0.641 pDC L2
ENSG00000029363 BCLAF1 898037 sc-eQTL 6.36e-02 -0.116 0.0623 0.641 pDC L2
ENSG00000112357 PEX7 365324 sc-eQTL 1.09e-01 -0.147 0.0916 0.641 pDC L2
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 2.46e-01 -0.0902 0.0775 0.641 pDC L2
ENSG00000135525 MAP7 637069 sc-eQTL 1.18e-01 -0.101 0.064 0.641 pDC L2
ENSG00000197442 MAP3K5 395411 sc-eQTL 8.99e-01 0.0132 0.103 0.641 pDC L2
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 5.27e-01 -0.05 0.0789 0.641 pDC L2
ENSG00000286646 AL121933.2 403843 sc-eQTL 9.82e-01 -0.00212 0.0952 0.641 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -31561 sc-eQTL 6.82e-02 0.133 0.0724 0.632 B_Memory LOneK1K
ENSG00000029363 BCLAF1 898037 sc-eQTL 4.02e-01 -0.0343 0.0409 0.632 B_Memory LOneK1K
ENSG00000112357 PEX7 365324 sc-eQTL 1.09e-01 -0.134 0.0834 0.632 B_Memory LOneK1K
ENSG00000112378 PERP -919531 sc-eQTL 8.20e-01 -0.0178 0.078 0.632 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 7.21e-01 0.0184 0.0515 0.632 B_Memory LOneK1K
ENSG00000197442 MAP3K5 395411 sc-eQTL 4.42e-02 -0.137 0.0675 0.632 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 2.70e-01 -0.0961 0.0868 0.632 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -31561 sc-eQTL 5.81e-01 0.0411 0.0744 0.632 B_Naive LOneK1K
ENSG00000029363 BCLAF1 898037 sc-eQTL 3.55e-01 -0.0316 0.0341 0.632 B_Naive LOneK1K
ENSG00000112357 PEX7 365324 sc-eQTL 7.29e-01 0.0315 0.0906 0.632 B_Naive LOneK1K
ENSG00000112378 PERP -919531 sc-eQTL 6.67e-01 0.035 0.0811 0.632 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 9.26e-01 -0.00399 0.0426 0.632 B_Naive LOneK1K
ENSG00000197442 MAP3K5 395411 sc-eQTL 9.54e-01 0.00363 0.0625 0.632 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 7.08e-02 -0.137 0.0753 0.632 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -31561 sc-eQTL 1.90e-04 0.184 0.0483 0.632 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 898037 sc-eQTL 4.14e-01 0.038 0.0464 0.632 CD14_Mono LOneK1K
ENSG00000112357 PEX7 365324 sc-eQTL 3.00e-02 0.194 0.0886 0.632 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 8.27e-01 0.0101 0.0462 0.632 CD14_Mono LOneK1K
ENSG00000135525 MAP7 637069 sc-eQTL 4.15e-01 0.0654 0.08 0.632 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 395411 sc-eQTL 9.15e-01 -0.00577 0.0541 0.632 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 9.42e-01 0.00401 0.0554 0.632 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 403843 sc-eQTL 5.59e-01 -0.0376 0.0644 0.632 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -31561 sc-eQTL 2.38e-04 0.214 0.0573 0.631 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 898037 sc-eQTL 3.09e-01 0.0544 0.0534 0.631 CD16_Mono LOneK1K
ENSG00000112357 PEX7 365324 sc-eQTL 9.00e-01 -0.0112 0.0894 0.631 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 9.10e-01 0.00623 0.0553 0.631 CD16_Mono LOneK1K
ENSG00000135525 MAP7 637069 sc-eQTL 1.52e-01 -0.124 0.086 0.631 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 395411 sc-eQTL 3.13e-01 -0.0716 0.0708 0.631 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 8.73e-01 -0.0118 0.0741 0.631 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 403843 sc-eQTL 7.05e-01 -0.0319 0.0841 0.631 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -31561 sc-eQTL 2.63e-02 0.124 0.0553 0.631 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 898037 sc-eQTL 4.89e-01 0.0225 0.0324 0.631 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 365324 sc-eQTL 3.72e-01 -0.0842 0.0942 0.631 NK_CD56dim LOneK1K
ENSG00000112378 PERP -919531 sc-eQTL 1.36e-01 -0.0872 0.0582 0.631 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -679326 sc-eQTL 4.04e-01 -0.0426 0.0509 0.631 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 395411 sc-eQTL 9.67e-02 -0.114 0.0684 0.631 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -680345 sc-eQTL 2.97e-01 -0.0743 0.0712 0.631 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -31561 pQTL 0.0001 0.0638 0.0164 0.0 0.0 0.402
ENSG00000027697 IFNGR1 -31561 eQTL 5.2299999999999995e-23 0.134 0.0132 0.0 0.0 0.412

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -31561 1.53e-05 1.6e-05 2.43e-06 9.13e-06 2.36e-06 6.64e-06 2.07e-05 2.9e-06 1.48e-05 7.3e-06 1.94e-05 7.34e-06 2.49e-05 5.16e-06 4.5e-06 8.94e-06 7.74e-06 1.24e-05 3.74e-06 3.53e-06 6.87e-06 1.32e-05 1.42e-05 4.43e-06 2.48e-05 4.61e-06 7.6e-06 5.43e-06 1.6e-05 1.22e-05 1.05e-05 1e-06 1.22e-06 3.78e-06 6.48e-06 2.86e-06 1.83e-06 2.37e-06 1.99e-06 1.42e-06 9.63e-07 1.88e-05 2.25e-06 2.2e-07 1.04e-06 2.15e-06 2.18e-06 7.04e-07 5.01e-07