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Genes within 1Mb (chr6:137182624:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -36825 sc-eQTL 1.52e-01 0.1 0.0696 0.63 B L1
ENSG00000029363 BCLAF1 892773 sc-eQTL 1.49e-01 -0.0449 0.031 0.63 B L1
ENSG00000112357 PEX7 360060 sc-eQTL 8.94e-01 0.0111 0.0827 0.63 B L1
ENSG00000112378 PERP -924795 sc-eQTL 5.28e-01 -0.0346 0.0547 0.63 B L1
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 3.18e-01 -0.044 0.044 0.63 B L1
ENSG00000197442 MAP3K5 390147 sc-eQTL 5.63e-01 -0.0356 0.0614 0.63 B L1
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 1.36e-01 -0.103 0.069 0.63 B L1
ENSG00000027697 IFNGR1 -36825 sc-eQTL 6.61e-04 0.158 0.0456 0.63 CD4T L1
ENSG00000029363 BCLAF1 892773 sc-eQTL 2.39e-02 -0.0797 0.035 0.63 CD4T L1
ENSG00000112357 PEX7 360060 sc-eQTL 1.48e-02 0.183 0.0744 0.63 CD4T L1
ENSG00000112378 PERP -924795 sc-eQTL 6.51e-02 0.0932 0.0502 0.63 CD4T L1
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 5.31e-01 -0.0298 0.0474 0.63 CD4T L1
ENSG00000197442 MAP3K5 390147 sc-eQTL 1.78e-01 -0.0487 0.036 0.63 CD4T L1
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 4.06e-02 -0.122 0.0591 0.63 CD4T L1
ENSG00000027697 IFNGR1 -36825 sc-eQTL 1.10e-02 0.134 0.0522 0.63 CD8T L1
ENSG00000029363 BCLAF1 892773 sc-eQTL 7.35e-01 -0.0122 0.0358 0.63 CD8T L1
ENSG00000112357 PEX7 360060 sc-eQTL 7.74e-01 0.0254 0.0883 0.63 CD8T L1
ENSG00000112378 PERP -924795 sc-eQTL 2.91e-01 -0.0609 0.0576 0.63 CD8T L1
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 7.45e-01 -0.0145 0.0446 0.63 CD8T L1
ENSG00000197442 MAP3K5 390147 sc-eQTL 2.74e-01 -0.0515 0.047 0.63 CD8T L1
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 9.35e-01 -0.00536 0.0655 0.63 CD8T L1
ENSG00000027697 IFNGR1 -36825 sc-eQTL 1.65e-01 0.0893 0.0641 0.628 DC L1
ENSG00000029363 BCLAF1 892773 sc-eQTL 5.21e-01 -0.0372 0.0579 0.628 DC L1
ENSG00000112357 PEX7 360060 sc-eQTL 1.93e-02 -0.211 0.0895 0.628 DC L1
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 8.64e-01 -0.0118 0.0689 0.628 DC L1
ENSG00000135525 MAP7 631805 sc-eQTL 7.50e-01 0.0238 0.0746 0.628 DC L1
ENSG00000197442 MAP3K5 390147 sc-eQTL 3.74e-01 0.0635 0.0713 0.628 DC L1
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 5.73e-01 0.0396 0.0701 0.628 DC L1
ENSG00000286646 AL121933.2 398579 sc-eQTL 8.52e-02 -0.16 0.0926 0.628 DC L1
ENSG00000027697 IFNGR1 -36825 sc-eQTL 5.49e-05 0.211 0.0513 0.63 Mono L1
ENSG00000029363 BCLAF1 892773 sc-eQTL 8.34e-01 0.00956 0.0455 0.63 Mono L1
ENSG00000112357 PEX7 360060 sc-eQTL 8.75e-02 0.153 0.089 0.63 Mono L1
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 9.07e-01 -0.00528 0.0452 0.63 Mono L1
ENSG00000135525 MAP7 631805 sc-eQTL 7.55e-01 0.0247 0.0791 0.63 Mono L1
ENSG00000197442 MAP3K5 390147 sc-eQTL 6.22e-01 -0.0261 0.0527 0.63 Mono L1
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 7.29e-01 0.0194 0.056 0.63 Mono L1
ENSG00000286646 AL121933.2 398579 sc-eQTL 8.06e-01 -0.0157 0.0639 0.63 Mono L1
ENSG00000027697 IFNGR1 -36825 sc-eQTL 1.94e-02 0.138 0.0587 0.631 NK L1
ENSG00000029363 BCLAF1 892773 sc-eQTL 6.48e-01 0.0144 0.0315 0.631 NK L1
ENSG00000112357 PEX7 360060 sc-eQTL 1.01e-01 -0.15 0.0911 0.631 NK L1
ENSG00000112378 PERP -924795 sc-eQTL 2.77e-01 -0.0628 0.0576 0.631 NK L1
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 3.44e-01 -0.0468 0.0494 0.631 NK L1
ENSG00000197442 MAP3K5 390147 sc-eQTL 4.49e-02 -0.142 0.0702 0.631 NK L1
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 2.39e-01 -0.0825 0.0699 0.631 NK L1
ENSG00000027697 IFNGR1 -36825 sc-eQTL 5.46e-01 0.0339 0.056 0.63 Other_T L1
ENSG00000029363 BCLAF1 892773 sc-eQTL 8.27e-01 -0.0103 0.047 0.63 Other_T L1
ENSG00000112357 PEX7 360060 sc-eQTL 7.56e-01 -0.0284 0.0913 0.63 Other_T L1
ENSG00000112378 PERP -924795 sc-eQTL 1.53e-01 0.105 0.073 0.63 Other_T L1
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 7.15e-01 -0.0127 0.0349 0.63 Other_T L1
ENSG00000146410 MTFR2 932289 sc-eQTL 9.41e-01 0.00392 0.0528 0.63 Other_T L1
ENSG00000197442 MAP3K5 390147 sc-eQTL 1.64e-01 -0.0937 0.067 0.63 Other_T L1
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 7.59e-01 0.0213 0.0692 0.63 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -36825 sc-eQTL 3.21e-01 0.0935 0.094 0.64 B_Activated L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 7.86e-01 -0.0208 0.0765 0.64 B_Activated L2
ENSG00000112357 PEX7 360060 sc-eQTL 2.62e-01 0.104 0.0924 0.64 B_Activated L2
ENSG00000112378 PERP -924795 sc-eQTL 7.04e-01 -0.0183 0.048 0.64 B_Activated L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 5.55e-01 -0.0549 0.093 0.64 B_Activated L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 1.54e-01 -0.148 0.104 0.64 B_Activated L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 2.22e-02 -0.185 0.0801 0.64 B_Activated L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 2.78e-01 0.0899 0.0827 0.633 B_Intermediate L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 1.38e-01 -0.0699 0.0469 0.633 B_Intermediate L2
ENSG00000112357 PEX7 360060 sc-eQTL 3.67e-01 -0.0782 0.0866 0.633 B_Intermediate L2
ENSG00000112378 PERP -924795 sc-eQTL 7.52e-01 0.025 0.0791 0.633 B_Intermediate L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 8.94e-01 -0.00828 0.062 0.633 B_Intermediate L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 8.91e-02 -0.127 0.0745 0.633 B_Intermediate L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 1.69e-01 -0.121 0.0876 0.633 B_Intermediate L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 3.51e-01 0.0853 0.0913 0.629 B_Memory L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 4.60e-01 -0.0402 0.0542 0.629 B_Memory L2
ENSG00000112357 PEX7 360060 sc-eQTL 2.32e-01 -0.11 0.0921 0.629 B_Memory L2
ENSG00000112378 PERP -924795 sc-eQTL 9.76e-01 -0.00264 0.0869 0.629 B_Memory L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 6.09e-01 -0.0306 0.0598 0.629 B_Memory L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 8.76e-01 -0.0128 0.0817 0.629 B_Memory L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 9.92e-01 -0.000844 0.089 0.629 B_Memory L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 2.34e-01 0.0841 0.0704 0.63 B_Naive1 L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 4.14e-01 -0.033 0.0403 0.63 B_Naive1 L2
ENSG00000112357 PEX7 360060 sc-eQTL 9.85e-01 -0.00178 0.0932 0.63 B_Naive1 L2
ENSG00000112378 PERP -924795 sc-eQTL 4.20e-01 0.0658 0.0814 0.63 B_Naive1 L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 6.24e-01 -0.0232 0.0473 0.63 B_Naive1 L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 6.94e-01 0.0262 0.0664 0.63 B_Naive1 L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 2.65e-01 -0.0825 0.0739 0.63 B_Naive1 L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 3.19e-01 -0.0859 0.0861 0.631 B_Naive2 L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 4.63e-01 -0.0368 0.05 0.631 B_Naive2 L2
ENSG00000112357 PEX7 360060 sc-eQTL 7.58e-01 0.0291 0.0944 0.631 B_Naive2 L2
ENSG00000112378 PERP -924795 sc-eQTL 2.96e-01 -0.0719 0.0686 0.631 B_Naive2 L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 7.34e-01 -0.0233 0.0687 0.631 B_Naive2 L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 2.13e-01 -0.0909 0.0729 0.631 B_Naive2 L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 4.27e-01 -0.0706 0.0887 0.631 B_Naive2 L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 4.36e-01 0.0632 0.081 0.634 CD4_CTL L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 2.90e-01 -0.0761 0.0717 0.634 CD4_CTL L2
ENSG00000112357 PEX7 360060 sc-eQTL 4.26e-01 0.0716 0.0898 0.634 CD4_CTL L2
ENSG00000112378 PERP -924795 sc-eQTL 5.33e-01 0.0568 0.0911 0.634 CD4_CTL L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 2.10e-01 -0.0666 0.053 0.634 CD4_CTL L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 1.88e-01 -0.112 0.0845 0.634 CD4_CTL L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 8.83e-01 0.0122 0.0827 0.634 CD4_CTL L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 5.14e-02 0.086 0.0439 0.63 CD4_Naive L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 8.31e-02 -0.0615 0.0353 0.63 CD4_Naive L2
ENSG00000112357 PEX7 360060 sc-eQTL 1.80e-02 0.197 0.0825 0.63 CD4_Naive L2
ENSG00000112378 PERP -924795 sc-eQTL 8.24e-02 0.12 0.0685 0.63 CD4_Naive L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 8.47e-01 -0.00933 0.0484 0.63 CD4_Naive L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 1.50e-01 -0.0511 0.0354 0.63 CD4_Naive L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 2.33e-02 -0.142 0.062 0.63 CD4_Naive L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 2.94e-02 0.137 0.0624 0.63 CD4_TCM L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 9.04e-02 -0.0673 0.0395 0.63 CD4_TCM L2
ENSG00000112357 PEX7 360060 sc-eQTL 3.43e-01 0.0878 0.0924 0.63 CD4_TCM L2
ENSG00000112378 PERP -924795 sc-eQTL 3.27e-01 0.0767 0.0781 0.63 CD4_TCM L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 3.35e-01 -0.0438 0.0453 0.63 CD4_TCM L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 9.72e-01 -0.00181 0.0518 0.63 CD4_TCM L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 9.76e-01 -0.00194 0.0637 0.63 CD4_TCM L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 1.63e-02 0.169 0.0697 0.63 CD4_TEM L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 1.10e-01 -0.08 0.0498 0.63 CD4_TEM L2
ENSG00000112357 PEX7 360060 sc-eQTL 3.59e-01 0.0837 0.0911 0.63 CD4_TEM L2
ENSG00000112378 PERP -924795 sc-eQTL 3.78e-01 0.0652 0.0738 0.63 CD4_TEM L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 6.41e-01 -0.0219 0.0469 0.63 CD4_TEM L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 1.63e-01 -0.101 0.0722 0.63 CD4_TEM L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 9.83e-01 -0.00157 0.0753 0.63 CD4_TEM L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 3.45e-02 0.132 0.0622 0.63 CD8_CTL L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 1.43e-01 -0.0613 0.0417 0.63 CD8_CTL L2
ENSG00000112357 PEX7 360060 sc-eQTL 6.72e-01 -0.0366 0.0865 0.63 CD8_CTL L2
ENSG00000112378 PERP -924795 sc-eQTL 6.67e-02 -0.152 0.0825 0.63 CD8_CTL L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 2.59e-01 -0.0598 0.0528 0.63 CD8_CTL L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 3.44e-01 -0.0706 0.0745 0.63 CD8_CTL L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 7.32e-01 0.0255 0.0744 0.63 CD8_CTL L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 9.39e-03 0.164 0.0625 0.63 CD8_Naive L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 6.13e-01 0.0224 0.0443 0.63 CD8_Naive L2
ENSG00000112357 PEX7 360060 sc-eQTL 3.14e-01 0.0927 0.0918 0.63 CD8_Naive L2
ENSG00000112378 PERP -924795 sc-eQTL 1.74e-01 0.0951 0.0696 0.63 CD8_Naive L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 9.15e-01 0.00533 0.0497 0.63 CD8_Naive L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 2.00e-02 -0.136 0.0581 0.63 CD8_Naive L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 5.75e-01 -0.0412 0.0734 0.63 CD8_Naive L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 1.74e-01 0.115 0.0843 0.637 CD8_TCM L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 6.04e-01 -0.033 0.0635 0.637 CD8_TCM L2
ENSG00000112357 PEX7 360060 sc-eQTL 9.26e-01 0.00907 0.0972 0.637 CD8_TCM L2
ENSG00000112378 PERP -924795 sc-eQTL 6.08e-01 -0.0489 0.0952 0.637 CD8_TCM L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 1.83e-01 -0.0611 0.0457 0.637 CD8_TCM L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 5.32e-01 -0.0512 0.0819 0.637 CD8_TCM L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 4.10e-02 0.171 0.0831 0.637 CD8_TCM L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 5.06e-01 0.0529 0.0795 0.639 CD8_TEM L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 3.43e-01 -0.0713 0.0749 0.639 CD8_TEM L2
ENSG00000112357 PEX7 360060 sc-eQTL 7.92e-01 0.0241 0.0916 0.639 CD8_TEM L2
ENSG00000112378 PERP -924795 sc-eQTL 7.31e-02 0.17 0.0944 0.639 CD8_TEM L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 8.57e-01 -0.0106 0.0587 0.639 CD8_TEM L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 1.22e-01 -0.14 0.0902 0.639 CD8_TEM L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 7.06e-01 -0.0328 0.087 0.639 CD8_TEM L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 3.05e-01 0.0664 0.0645 0.63 MAIT L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 3.46e-01 -0.0507 0.0536 0.63 MAIT L2
ENSG00000112357 PEX7 360060 sc-eQTL 5.08e-01 -0.0581 0.0876 0.63 MAIT L2
ENSG00000112378 PERP -924795 sc-eQTL 2.27e-02 0.207 0.0903 0.63 MAIT L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 3.74e-01 -0.0387 0.0434 0.63 MAIT L2
ENSG00000146410 MTFR2 932289 sc-eQTL 1.77e-01 -0.0978 0.0722 0.63 MAIT L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 1.93e-01 -0.0987 0.0755 0.63 MAIT L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 9.55e-01 -0.00454 0.0805 0.63 MAIT L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 1.84e-01 0.0924 0.0693 0.624 NK_CD56bright L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 3.01e-01 -0.0531 0.0512 0.624 NK_CD56bright L2
ENSG00000112357 PEX7 360060 sc-eQTL 1.13e-01 -0.144 0.0902 0.624 NK_CD56bright L2
ENSG00000112378 PERP -924795 sc-eQTL 2.66e-01 0.0904 0.081 0.624 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 5.94e-01 -0.0276 0.0518 0.624 NK_CD56bright L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 3.59e-02 -0.165 0.078 0.624 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 4.90e-03 -0.231 0.081 0.624 NK_CD56bright L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 2.39e-02 0.123 0.0541 0.629 NK_CD56dim L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 2.40e-01 0.042 0.0357 0.629 NK_CD56dim L2
ENSG00000112357 PEX7 360060 sc-eQTL 6.51e-01 -0.0428 0.0943 0.629 NK_CD56dim L2
ENSG00000112378 PERP -924795 sc-eQTL 7.36e-01 0.0224 0.0663 0.629 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 3.29e-01 -0.0504 0.0514 0.629 NK_CD56dim L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 7.51e-02 -0.132 0.0737 0.629 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 9.18e-01 0.00799 0.0772 0.629 NK_CD56dim L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 4.36e-02 0.142 0.07 0.616 NK_HLA L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 4.35e-01 0.0468 0.0598 0.616 NK_HLA L2
ENSG00000112357 PEX7 360060 sc-eQTL 3.71e-01 -0.0804 0.0897 0.616 NK_HLA L2
ENSG00000112378 PERP -924795 sc-eQTL 7.88e-02 -0.128 0.0723 0.616 NK_HLA L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 8.77e-01 0.0087 0.0561 0.616 NK_HLA L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 7.89e-02 -0.156 0.0884 0.616 NK_HLA L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 1.88e-01 -0.119 0.09 0.616 NK_HLA L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 9.68e-03 0.148 0.0567 0.629 NK_cytokine L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 9.83e-01 0.000923 0.043 0.629 NK_cytokine L2
ENSG00000112357 PEX7 360060 sc-eQTL 7.25e-01 -0.0319 0.0904 0.629 NK_cytokine L2
ENSG00000112378 PERP -924795 sc-eQTL 4.69e-01 -0.0497 0.0685 0.629 NK_cytokine L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 3.44e-01 -0.0487 0.0513 0.629 NK_cytokine L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 1.48e-01 -0.102 0.0703 0.629 NK_cytokine L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 1.61e-01 -0.109 0.0772 0.629 NK_cytokine L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 3.42e-01 0.108 0.113 0.615 PB L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 8.87e-01 -0.014 0.0983 0.615 PB L2
ENSG00000112357 PEX7 360060 sc-eQTL 6.64e-01 0.051 0.117 0.615 PB L2
ENSG00000112378 PERP -924795 sc-eQTL 9.11e-01 -0.00822 0.073 0.615 PB L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 1.00e+00 -2.45e-05 0.0886 0.615 PB L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 5.08e-02 0.196 0.0991 0.615 PB L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 7.05e-02 0.191 0.105 0.615 PB L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 9.63e-01 -0.00336 0.0718 0.63 Pro_T L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 8.52e-01 -0.0139 0.0744 0.63 Pro_T L2
ENSG00000112357 PEX7 360060 sc-eQTL 6.20e-01 0.0433 0.0871 0.63 Pro_T L2
ENSG00000112378 PERP -924795 sc-eQTL 9.12e-01 -0.00763 0.0693 0.63 Pro_T L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 2.06e-01 -0.0552 0.0436 0.63 Pro_T L2
ENSG00000146410 MTFR2 932289 sc-eQTL 4.53e-01 0.0455 0.0605 0.63 Pro_T L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 2.65e-01 -0.0944 0.0844 0.63 Pro_T L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 1.53e-01 0.121 0.0844 0.63 Pro_T L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 6.25e-02 0.156 0.0833 0.63 Treg L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 3.55e-02 -0.114 0.0537 0.63 Treg L2
ENSG00000112357 PEX7 360060 sc-eQTL 1.42e-01 0.13 0.0882 0.63 Treg L2
ENSG00000112378 PERP -924795 sc-eQTL 1.39e-01 0.142 0.0954 0.63 Treg L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 7.40e-01 -0.0177 0.0533 0.63 Treg L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 4.04e-01 0.0483 0.0577 0.63 Treg L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 2.06e-01 -0.103 0.0811 0.63 Treg L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 4.58e-01 0.0534 0.0719 0.627 cDC L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 3.07e-01 0.0741 0.0723 0.627 cDC L2
ENSG00000112357 PEX7 360060 sc-eQTL 1.37e-01 -0.138 0.0926 0.627 cDC L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 4.04e-01 -0.0593 0.0708 0.627 cDC L2
ENSG00000135525 MAP7 631805 sc-eQTL 4.54e-01 0.0622 0.0828 0.627 cDC L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 2.27e-01 0.0881 0.0727 0.627 cDC L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 1.15e-01 0.145 0.0918 0.627 cDC L2
ENSG00000286646 AL121933.2 398579 sc-eQTL 2.82e-02 -0.208 0.0938 0.627 cDC L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 1.62e-04 0.185 0.0481 0.63 cMono_IL1B L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 8.76e-01 0.00835 0.0533 0.63 cMono_IL1B L2
ENSG00000112357 PEX7 360060 sc-eQTL 2.69e-02 0.197 0.0884 0.63 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 9.62e-01 0.00253 0.0535 0.63 cMono_IL1B L2
ENSG00000135525 MAP7 631805 sc-eQTL 8.18e-01 -0.0178 0.077 0.63 cMono_IL1B L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 5.83e-01 0.0305 0.0556 0.63 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 8.02e-01 -0.0144 0.0571 0.63 cMono_IL1B L2
ENSG00000286646 AL121933.2 398579 sc-eQTL 9.54e-01 -0.00418 0.0715 0.63 cMono_IL1B L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 1.02e-02 0.147 0.0567 0.63 cMono_S100A L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 9.22e-02 0.0994 0.0588 0.63 cMono_S100A L2
ENSG00000112357 PEX7 360060 sc-eQTL 2.60e-01 0.104 0.0921 0.63 cMono_S100A L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 5.67e-01 0.0293 0.0511 0.63 cMono_S100A L2
ENSG00000135525 MAP7 631805 sc-eQTL 1.94e-01 0.112 0.0858 0.63 cMono_S100A L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 3.36e-01 -0.0669 0.0694 0.63 cMono_S100A L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 9.50e-01 -0.00458 0.0735 0.63 cMono_S100A L2
ENSG00000286646 AL121933.2 398579 sc-eQTL 6.13e-01 -0.0363 0.0717 0.63 cMono_S100A L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 1.54e-01 0.123 0.086 0.621 gdT L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 9.69e-01 -0.00301 0.0763 0.621 gdT L2
ENSG00000112357 PEX7 360060 sc-eQTL 9.00e-01 -0.0139 0.11 0.621 gdT L2
ENSG00000112378 PERP -924795 sc-eQTL 6.35e-02 0.177 0.0947 0.621 gdT L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 4.65e-01 0.039 0.0532 0.621 gdT L2
ENSG00000146410 MTFR2 932289 sc-eQTL 1.69e-02 0.199 0.0824 0.621 gdT L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 4.76e-01 -0.0804 0.113 0.621 gdT L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 6.52e-01 -0.0435 0.0965 0.621 gdT L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 7.04e-02 0.11 0.0607 0.629 intMono L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 7.27e-01 0.0282 0.0808 0.629 intMono L2
ENSG00000112357 PEX7 360060 sc-eQTL 9.42e-01 -0.00596 0.0825 0.629 intMono L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 5.99e-01 0.0278 0.0528 0.629 intMono L2
ENSG00000135525 MAP7 631805 sc-eQTL 2.37e-01 -0.096 0.0809 0.629 intMono L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 3.85e-01 -0.0747 0.0858 0.629 intMono L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 7.20e-01 0.0283 0.0787 0.629 intMono L2
ENSG00000286646 AL121933.2 398579 sc-eQTL 7.11e-01 0.0337 0.0908 0.629 intMono L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 6.49e-04 0.24 0.0694 0.631 ncMono L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 4.88e-01 0.0385 0.0554 0.631 ncMono L2
ENSG00000112357 PEX7 360060 sc-eQTL 8.34e-01 -0.0185 0.0885 0.631 ncMono L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 4.43e-01 0.0486 0.0631 0.631 ncMono L2
ENSG00000135525 MAP7 631805 sc-eQTL 6.40e-01 -0.0366 0.0781 0.631 ncMono L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 2.81e-01 -0.0886 0.0819 0.631 ncMono L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 9.14e-01 -0.00852 0.0791 0.631 ncMono L2
ENSG00000286646 AL121933.2 398579 sc-eQTL 2.32e-01 -0.0996 0.0831 0.631 ncMono L2
ENSG00000027697 IFNGR1 -36825 sc-eQTL 6.77e-01 0.0352 0.0841 0.638 pDC L2
ENSG00000029363 BCLAF1 892773 sc-eQTL 6.70e-02 -0.115 0.0625 0.638 pDC L2
ENSG00000112357 PEX7 360060 sc-eQTL 9.50e-02 -0.154 0.0918 0.638 pDC L2
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 3.12e-01 -0.0789 0.0778 0.638 pDC L2
ENSG00000135525 MAP7 631805 sc-eQTL 6.72e-02 -0.118 0.064 0.638 pDC L2
ENSG00000197442 MAP3K5 390147 sc-eQTL 7.98e-01 0.0265 0.104 0.638 pDC L2
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 6.01e-01 -0.0415 0.0792 0.638 pDC L2
ENSG00000286646 AL121933.2 398579 sc-eQTL 9.65e-01 0.00422 0.0955 0.638 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -36825 sc-eQTL 5.74e-02 0.139 0.0725 0.63 B_Memory LOneK1K
ENSG00000029363 BCLAF1 892773 sc-eQTL 3.03e-01 -0.0423 0.041 0.63 B_Memory LOneK1K
ENSG00000112357 PEX7 360060 sc-eQTL 1.65e-01 -0.117 0.0837 0.63 B_Memory LOneK1K
ENSG00000112378 PERP -924795 sc-eQTL 9.21e-01 -0.00775 0.0782 0.63 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 8.46e-01 0.01 0.0516 0.63 B_Memory LOneK1K
ENSG00000197442 MAP3K5 390147 sc-eQTL 5.48e-02 -0.131 0.0677 0.63 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 1.96e-01 -0.113 0.0869 0.63 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -36825 sc-eQTL 6.73e-01 0.0315 0.0746 0.63 B_Naive LOneK1K
ENSG00000029363 BCLAF1 892773 sc-eQTL 2.96e-01 -0.0358 0.0342 0.63 B_Naive LOneK1K
ENSG00000112357 PEX7 360060 sc-eQTL 6.64e-01 0.0394 0.0908 0.63 B_Naive LOneK1K
ENSG00000112378 PERP -924795 sc-eQTL 5.52e-01 0.0484 0.0812 0.63 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 8.96e-01 -0.00562 0.0427 0.63 B_Naive LOneK1K
ENSG00000197442 MAP3K5 390147 sc-eQTL 8.73e-01 -0.01 0.0626 0.63 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 7.39e-02 -0.136 0.0755 0.63 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -36825 sc-eQTL 1.21e-04 0.189 0.0483 0.63 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 892773 sc-eQTL 5.19e-01 0.0301 0.0466 0.63 CD14_Mono LOneK1K
ENSG00000112357 PEX7 360060 sc-eQTL 4.23e-02 0.182 0.089 0.63 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 8.55e-01 0.00848 0.0463 0.63 CD14_Mono LOneK1K
ENSG00000135525 MAP7 631805 sc-eQTL 3.71e-01 0.0719 0.0802 0.63 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 390147 sc-eQTL 9.47e-01 -0.00361 0.0543 0.63 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 9.19e-01 0.00564 0.0555 0.63 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 398579 sc-eQTL 5.44e-01 -0.0393 0.0645 0.63 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -36825 sc-eQTL 2.73e-04 0.213 0.0575 0.629 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 892773 sc-eQTL 3.35e-01 0.0517 0.0535 0.629 CD16_Mono LOneK1K
ENSG00000112357 PEX7 360060 sc-eQTL 8.88e-01 -0.0126 0.0896 0.629 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 9.42e-01 0.00407 0.0555 0.629 CD16_Mono LOneK1K
ENSG00000135525 MAP7 631805 sc-eQTL 1.60e-01 -0.121 0.0862 0.629 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 390147 sc-eQTL 2.76e-01 -0.0774 0.0709 0.629 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 8.98e-01 -0.00952 0.0743 0.629 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 398579 sc-eQTL 6.96e-01 -0.033 0.0844 0.629 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -36825 sc-eQTL 2.76e-02 0.123 0.0554 0.629 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 892773 sc-eQTL 4.83e-01 0.0228 0.0325 0.629 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 360060 sc-eQTL 3.46e-01 -0.0892 0.0944 0.629 NK_CD56dim LOneK1K
ENSG00000112378 PERP -924795 sc-eQTL 1.26e-01 -0.0896 0.0584 0.629 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -684590 sc-eQTL 3.51e-01 -0.0476 0.051 0.629 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 390147 sc-eQTL 6.18e-02 -0.129 0.0685 0.629 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -685609 sc-eQTL 3.19e-01 -0.0712 0.0713 0.629 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -36825 pQTL 9.05e-05 0.064 0.0163 0.0 0.0 0.402
ENSG00000027697 IFNGR1 -36825 eQTL 2.32e-22 0.131 0.0132 0.0 0.0 0.412

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -36825 1.48e-05 1.73e-05 3.03e-06 1.1e-05 3.18e-06 7.76e-06 2.15e-05 3.5e-06 1.72e-05 8.72e-06 2.23e-05 8.6e-06 3.06e-05 6.49e-06 5.19e-06 1.02e-05 9.09e-06 1.51e-05 4.65e-06 4.69e-06 8.43e-06 1.71e-05 1.67e-05 5.19e-06 2.77e-05 5.57e-06 8.03e-06 7.77e-06 1.75e-05 1.54e-05 1.23e-05 1.33e-06 1.88e-06 4.94e-06 7.8e-06 4.37e-06 2.18e-06 2.77e-06 3.48e-06 2.49e-06 1.67e-06 2.07e-05 2.55e-06 3.6e-07 1.83e-06 2.68e-06 3.25e-06 1.4e-06 1.12e-06