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Genes within 1Mb (chr6:137182255:C:CA):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -37194 sc-eQTL 1.60e-01 0.0976 0.0691 0.628 B L1
ENSG00000029363 BCLAF1 892404 sc-eQTL 1.95e-01 -0.04 0.0308 0.628 B L1
ENSG00000112357 PEX7 359691 sc-eQTL 9.17e-01 0.00862 0.0822 0.628 B L1
ENSG00000112378 PERP -925164 sc-eQTL 6.64e-01 -0.0236 0.0544 0.628 B L1
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 3.20e-01 -0.0436 0.0437 0.628 B L1
ENSG00000197442 MAP3K5 389778 sc-eQTL 4.56e-01 -0.0455 0.061 0.628 B L1
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 1.13e-01 -0.109 0.0685 0.628 B L1
ENSG00000027697 IFNGR1 -37194 sc-eQTL 6.08e-04 0.157 0.0452 0.628 CD4T L1
ENSG00000029363 BCLAF1 892404 sc-eQTL 3.47e-02 -0.0741 0.0348 0.628 CD4T L1
ENSG00000112357 PEX7 359691 sc-eQTL 1.10e-02 0.189 0.0738 0.628 CD4T L1
ENSG00000112378 PERP -925164 sc-eQTL 7.96e-02 0.088 0.0499 0.628 CD4T L1
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 5.23e-01 -0.0301 0.0471 0.628 CD4T L1
ENSG00000197442 MAP3K5 389778 sc-eQTL 1.72e-01 -0.049 0.0358 0.628 CD4T L1
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 4.64e-02 -0.118 0.0588 0.628 CD4T L1
ENSG00000027697 IFNGR1 -37194 sc-eQTL 1.24e-02 0.131 0.0518 0.628 CD8T L1
ENSG00000029363 BCLAF1 892404 sc-eQTL 7.96e-01 -0.00919 0.0356 0.628 CD8T L1
ENSG00000112357 PEX7 359691 sc-eQTL 8.31e-01 0.0188 0.0876 0.628 CD8T L1
ENSG00000112378 PERP -925164 sc-eQTL 2.80e-01 -0.0619 0.0571 0.628 CD8T L1
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 7.83e-01 -0.0122 0.0442 0.628 CD8T L1
ENSG00000197442 MAP3K5 389778 sc-eQTL 3.15e-01 -0.0469 0.0466 0.628 CD8T L1
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 9.49e-01 -0.00417 0.065 0.628 CD8T L1
ENSG00000027697 IFNGR1 -37194 sc-eQTL 1.66e-01 0.0887 0.0639 0.626 DC L1
ENSG00000029363 BCLAF1 892404 sc-eQTL 5.46e-01 -0.0349 0.0577 0.626 DC L1
ENSG00000112357 PEX7 359691 sc-eQTL 1.24e-02 -0.224 0.0889 0.626 DC L1
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 9.75e-01 0.00213 0.0686 0.626 DC L1
ENSG00000135525 MAP7 631436 sc-eQTL 6.75e-01 0.0312 0.0742 0.626 DC L1
ENSG00000197442 MAP3K5 389778 sc-eQTL 2.85e-01 0.0761 0.071 0.626 DC L1
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 4.05e-01 0.0582 0.0698 0.626 DC L1
ENSG00000286646 AL121933.2 398210 sc-eQTL 9.60e-02 -0.154 0.0922 0.626 DC L1
ENSG00000027697 IFNGR1 -37194 sc-eQTL 6.97e-05 0.207 0.0511 0.628 Mono L1
ENSG00000029363 BCLAF1 892404 sc-eQTL 8.26e-01 0.01 0.0453 0.628 Mono L1
ENSG00000112357 PEX7 359691 sc-eQTL 1.25e-01 0.137 0.0887 0.628 Mono L1
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 9.94e-01 -0.000331 0.045 0.628 Mono L1
ENSG00000135525 MAP7 631436 sc-eQTL 6.97e-01 0.0307 0.0787 0.628 Mono L1
ENSG00000197442 MAP3K5 389778 sc-eQTL 5.66e-01 -0.0301 0.0525 0.628 Mono L1
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 6.45e-01 0.0257 0.0557 0.628 Mono L1
ENSG00000286646 AL121933.2 398210 sc-eQTL 8.84e-01 -0.00927 0.0636 0.628 Mono L1
ENSG00000027697 IFNGR1 -37194 sc-eQTL 1.47e-02 0.143 0.0581 0.629 NK L1
ENSG00000029363 BCLAF1 892404 sc-eQTL 5.26e-01 0.0199 0.0313 0.629 NK L1
ENSG00000112357 PEX7 359691 sc-eQTL 1.05e-01 -0.147 0.0904 0.629 NK L1
ENSG00000112378 PERP -925164 sc-eQTL 2.32e-01 -0.0685 0.0571 0.629 NK L1
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 3.62e-01 -0.0448 0.049 0.629 NK L1
ENSG00000197442 MAP3K5 389778 sc-eQTL 4.98e-02 -0.137 0.0697 0.629 NK L1
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 3.06e-01 -0.0712 0.0694 0.629 NK L1
ENSG00000027697 IFNGR1 -37194 sc-eQTL 5.39e-01 0.0342 0.0556 0.628 Other_T L1
ENSG00000029363 BCLAF1 892404 sc-eQTL 9.36e-01 -0.00372 0.0466 0.628 Other_T L1
ENSG00000112357 PEX7 359691 sc-eQTL 6.69e-01 -0.0388 0.0907 0.628 Other_T L1
ENSG00000112378 PERP -925164 sc-eQTL 1.76e-01 0.0985 0.0725 0.628 Other_T L1
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 6.75e-01 -0.0145 0.0346 0.628 Other_T L1
ENSG00000146410 MTFR2 931920 sc-eQTL 9.93e-01 0.00044 0.0524 0.628 Other_T L1
ENSG00000197442 MAP3K5 389778 sc-eQTL 1.90e-01 -0.0876 0.0666 0.628 Other_T L1
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 7.81e-01 0.0191 0.0687 0.628 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -37194 sc-eQTL 3.50e-01 0.0873 0.0931 0.638 B_Activated L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 9.43e-01 -0.00541 0.0758 0.638 B_Activated L2
ENSG00000112357 PEX7 359691 sc-eQTL 2.25e-01 0.111 0.0914 0.638 B_Activated L2
ENSG00000112378 PERP -925164 sc-eQTL 7.11e-01 -0.0176 0.0475 0.638 B_Activated L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 6.36e-01 -0.0436 0.0921 0.638 B_Activated L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 1.49e-01 -0.149 0.103 0.638 B_Activated L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 2.85e-02 -0.175 0.0794 0.638 B_Activated L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 3.35e-01 0.0793 0.0821 0.631 B_Intermediate L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 1.64e-01 -0.065 0.0466 0.631 B_Intermediate L2
ENSG00000112357 PEX7 359691 sc-eQTL 3.65e-01 -0.078 0.0859 0.631 B_Intermediate L2
ENSG00000112378 PERP -925164 sc-eQTL 7.27e-01 0.0275 0.0785 0.631 B_Intermediate L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 8.96e-01 -0.00803 0.0616 0.631 B_Intermediate L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 7.83e-02 -0.131 0.0739 0.631 B_Intermediate L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 1.57e-01 -0.124 0.087 0.631 B_Intermediate L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 4.17e-01 0.0736 0.0905 0.627 B_Memory L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 4.49e-01 -0.0407 0.0538 0.627 B_Memory L2
ENSG00000112357 PEX7 359691 sc-eQTL 1.67e-01 -0.126 0.0911 0.627 B_Memory L2
ENSG00000112378 PERP -925164 sc-eQTL 9.32e-01 0.00732 0.0861 0.627 B_Memory L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 6.66e-01 -0.0257 0.0593 0.627 B_Memory L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 8.07e-01 -0.0198 0.081 0.627 B_Memory L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 9.90e-01 0.00106 0.0882 0.627 B_Memory L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 2.56e-01 0.0797 0.0699 0.628 B_Naive1 L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 4.72e-01 -0.0288 0.04 0.628 B_Naive1 L2
ENSG00000112357 PEX7 359691 sc-eQTL 9.32e-01 -0.00794 0.0925 0.628 B_Naive1 L2
ENSG00000112378 PERP -925164 sc-eQTL 3.56e-01 0.0747 0.0808 0.628 B_Naive1 L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 5.94e-01 -0.025 0.0469 0.628 B_Naive1 L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 8.39e-01 0.0134 0.066 0.628 B_Naive1 L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 2.35e-01 -0.0873 0.0733 0.628 B_Naive1 L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 3.00e-01 -0.0888 0.0855 0.629 B_Naive2 L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 4.24e-01 -0.0397 0.0496 0.629 B_Naive2 L2
ENSG00000112357 PEX7 359691 sc-eQTL 6.20e-01 0.0466 0.0937 0.629 B_Naive2 L2
ENSG00000112378 PERP -925164 sc-eQTL 3.33e-01 -0.0662 0.0682 0.629 B_Naive2 L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 6.81e-01 -0.0281 0.0682 0.629 B_Naive2 L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 1.71e-01 -0.0994 0.0723 0.629 B_Naive2 L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 4.73e-01 -0.0634 0.0882 0.629 B_Naive2 L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 4.88e-01 0.0558 0.0803 0.632 CD4_CTL L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 2.55e-01 -0.0812 0.0711 0.632 CD4_CTL L2
ENSG00000112357 PEX7 359691 sc-eQTL 3.55e-01 0.0825 0.0889 0.632 CD4_CTL L2
ENSG00000112378 PERP -925164 sc-eQTL 4.97e-01 0.0614 0.0902 0.632 CD4_CTL L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 1.66e-01 -0.073 0.0524 0.632 CD4_CTL L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 3.02e-01 -0.0868 0.0839 0.632 CD4_CTL L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 6.94e-01 0.0323 0.082 0.632 CD4_CTL L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 4.48e-02 0.0879 0.0436 0.628 CD4_Naive L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 1.15e-01 -0.0556 0.0351 0.628 CD4_Naive L2
ENSG00000112357 PEX7 359691 sc-eQTL 1.62e-02 0.199 0.0819 0.628 CD4_Naive L2
ENSG00000112378 PERP -925164 sc-eQTL 9.12e-02 0.116 0.0681 0.628 CD4_Naive L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 8.51e-01 -0.00907 0.0481 0.628 CD4_Naive L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 1.42e-01 -0.0518 0.0351 0.628 CD4_Naive L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 3.01e-02 -0.134 0.0616 0.628 CD4_Naive L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 2.64e-02 0.138 0.0618 0.628 CD4_TCM L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 1.01e-01 -0.0645 0.0392 0.628 CD4_TCM L2
ENSG00000112357 PEX7 359691 sc-eQTL 2.90e-01 0.0971 0.0916 0.628 CD4_TCM L2
ENSG00000112378 PERP -925164 sc-eQTL 3.47e-01 0.073 0.0774 0.628 CD4_TCM L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 3.34e-01 -0.0435 0.045 0.628 CD4_TCM L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 9.76e-01 -0.00156 0.0513 0.628 CD4_TCM L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 9.65e-01 -0.00279 0.0631 0.628 CD4_TCM L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 1.52e-02 0.169 0.0691 0.628 CD4_TEM L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 1.23e-01 -0.0766 0.0494 0.628 CD4_TEM L2
ENSG00000112357 PEX7 359691 sc-eQTL 3.63e-01 0.0824 0.0903 0.628 CD4_TEM L2
ENSG00000112378 PERP -925164 sc-eQTL 3.90e-01 0.0631 0.0732 0.628 CD4_TEM L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 6.45e-01 -0.0215 0.0466 0.628 CD4_TEM L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 1.89e-01 -0.0945 0.0716 0.628 CD4_TEM L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 9.93e-01 0.000676 0.0747 0.628 CD4_TEM L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 3.81e-02 0.129 0.0618 0.628 CD8_CTL L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 1.49e-01 -0.06 0.0414 0.628 CD8_CTL L2
ENSG00000112357 PEX7 359691 sc-eQTL 8.28e-01 -0.0186 0.0859 0.628 CD8_CTL L2
ENSG00000112378 PERP -925164 sc-eQTL 7.41e-02 -0.147 0.082 0.628 CD8_CTL L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 2.72e-01 -0.0577 0.0524 0.628 CD8_CTL L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 4.04e-01 -0.0619 0.074 0.628 CD8_CTL L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 7.20e-01 0.0265 0.0739 0.628 CD8_CTL L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 8.49e-03 0.164 0.0619 0.628 CD8_Naive L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 5.49e-01 0.0263 0.0439 0.628 CD8_Naive L2
ENSG00000112357 PEX7 359691 sc-eQTL 3.61e-01 0.0833 0.091 0.628 CD8_Naive L2
ENSG00000112378 PERP -925164 sc-eQTL 1.96e-01 0.0895 0.069 0.628 CD8_Naive L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 8.84e-01 0.00721 0.0492 0.628 CD8_Naive L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 2.18e-02 -0.133 0.0576 0.628 CD8_Naive L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 6.17e-01 -0.0365 0.0727 0.628 CD8_Naive L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 2.19e-01 0.103 0.0835 0.634 CD8_TCM L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 5.94e-01 -0.0336 0.0629 0.634 CD8_TCM L2
ENSG00000112357 PEX7 359691 sc-eQTL 9.00e-01 0.0121 0.0963 0.634 CD8_TCM L2
ENSG00000112378 PERP -925164 sc-eQTL 5.86e-01 -0.0513 0.0942 0.634 CD8_TCM L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 1.85e-01 -0.0601 0.0452 0.634 CD8_TCM L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 6.09e-01 -0.0415 0.0811 0.634 CD8_TCM L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 4.00e-02 0.17 0.0823 0.634 CD8_TCM L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 5.57e-01 0.0465 0.079 0.637 CD8_TEM L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 3.34e-01 -0.0721 0.0745 0.637 CD8_TEM L2
ENSG00000112357 PEX7 359691 sc-eQTL 9.45e-01 0.00633 0.0911 0.637 CD8_TEM L2
ENSG00000112378 PERP -925164 sc-eQTL 6.50e-02 0.174 0.0939 0.637 CD8_TEM L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 8.17e-01 -0.0135 0.0583 0.637 CD8_TEM L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 1.66e-01 -0.125 0.0898 0.637 CD8_TEM L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 5.38e-01 -0.0534 0.0865 0.637 CD8_TEM L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 2.75e-01 0.0701 0.064 0.628 MAIT L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 4.12e-01 -0.0438 0.0532 0.628 MAIT L2
ENSG00000112357 PEX7 359691 sc-eQTL 5.48e-01 -0.0524 0.087 0.628 MAIT L2
ENSG00000112378 PERP -925164 sc-eQTL 3.02e-02 0.196 0.0897 0.628 MAIT L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 3.73e-01 -0.0385 0.0431 0.628 MAIT L2
ENSG00000146410 MTFR2 931920 sc-eQTL 1.23e-01 -0.111 0.0715 0.628 MAIT L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 2.60e-01 -0.0846 0.075 0.628 MAIT L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 9.54e-01 -0.00458 0.0799 0.628 MAIT L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 1.70e-01 0.0947 0.0688 0.622 NK_CD56bright L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 3.70e-01 -0.0457 0.0509 0.622 NK_CD56bright L2
ENSG00000112357 PEX7 359691 sc-eQTL 1.03e-01 -0.146 0.0895 0.622 NK_CD56bright L2
ENSG00000112378 PERP -925164 sc-eQTL 2.79e-01 0.0874 0.0805 0.622 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 5.63e-01 -0.0298 0.0514 0.622 NK_CD56bright L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 3.86e-02 -0.161 0.0774 0.622 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 4.77e-03 -0.23 0.0804 0.622 NK_CD56bright L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 2.25e-02 0.123 0.0537 0.627 NK_CD56dim L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 1.95e-01 0.046 0.0354 0.627 NK_CD56dim L2
ENSG00000112357 PEX7 359691 sc-eQTL 6.90e-01 -0.0374 0.0936 0.627 NK_CD56dim L2
ENSG00000112378 PERP -925164 sc-eQTL 7.77e-01 0.0187 0.0658 0.627 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 3.06e-01 -0.0524 0.0511 0.627 NK_CD56dim L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 7.24e-02 -0.132 0.0731 0.627 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 8.14e-01 0.0181 0.0767 0.627 NK_CD56dim L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 3.37e-02 0.148 0.0694 0.614 NK_HLA L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 3.84e-01 0.0518 0.0593 0.614 NK_HLA L2
ENSG00000112357 PEX7 359691 sc-eQTL 2.67e-01 -0.0989 0.0889 0.614 NK_HLA L2
ENSG00000112378 PERP -925164 sc-eQTL 8.98e-02 -0.122 0.0718 0.614 NK_HLA L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 7.08e-01 0.0209 0.0556 0.614 NK_HLA L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 9.85e-02 -0.146 0.0878 0.614 NK_HLA L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 1.43e-01 -0.131 0.0892 0.614 NK_HLA L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 8.46e-03 0.149 0.0562 0.627 NK_cytokine L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 8.88e-01 0.00603 0.0427 0.627 NK_cytokine L2
ENSG00000112357 PEX7 359691 sc-eQTL 7.48e-01 -0.0288 0.0897 0.627 NK_cytokine L2
ENSG00000112378 PERP -925164 sc-eQTL 3.83e-01 -0.0594 0.068 0.627 NK_cytokine L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 3.45e-01 -0.0483 0.0509 0.627 NK_cytokine L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 1.78e-01 -0.0945 0.0698 0.627 NK_cytokine L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 1.96e-01 -0.0994 0.0766 0.627 NK_cytokine L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 3.42e-01 0.108 0.113 0.615 PB L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 8.87e-01 -0.014 0.0983 0.615 PB L2
ENSG00000112357 PEX7 359691 sc-eQTL 6.64e-01 0.051 0.117 0.615 PB L2
ENSG00000112378 PERP -925164 sc-eQTL 9.11e-01 -0.00822 0.073 0.615 PB L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 1.00e+00 -2.45e-05 0.0886 0.615 PB L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 5.08e-02 0.196 0.0991 0.615 PB L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 7.05e-02 0.191 0.105 0.615 PB L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 9.07e-01 -0.00837 0.0713 0.628 Pro_T L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 8.82e-01 -0.011 0.0739 0.628 Pro_T L2
ENSG00000112357 PEX7 359691 sc-eQTL 7.47e-01 0.028 0.0866 0.628 Pro_T L2
ENSG00000112378 PERP -925164 sc-eQTL 9.18e-01 -0.00714 0.0689 0.628 Pro_T L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 1.77e-01 -0.0586 0.0433 0.628 Pro_T L2
ENSG00000146410 MTFR2 931920 sc-eQTL 4.59e-01 0.0446 0.0601 0.628 Pro_T L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 2.42e-01 -0.0983 0.0838 0.628 Pro_T L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 1.60e-01 0.118 0.0839 0.628 Pro_T L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 7.79e-02 0.146 0.0826 0.628 Treg L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 4.35e-02 -0.108 0.0532 0.628 Treg L2
ENSG00000112357 PEX7 359691 sc-eQTL 1.57e-01 0.124 0.0875 0.628 Treg L2
ENSG00000112378 PERP -925164 sc-eQTL 1.49e-01 0.137 0.0946 0.628 Treg L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 6.63e-01 -0.0231 0.0529 0.628 Treg L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 4.62e-01 0.0422 0.0572 0.628 Treg L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 1.96e-01 -0.104 0.0804 0.628 Treg L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 5.73e-01 0.0404 0.0716 0.624 cDC L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 2.93e-01 0.0759 0.072 0.624 cDC L2
ENSG00000112357 PEX7 359691 sc-eQTL 1.76e-01 -0.125 0.0922 0.624 cDC L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 5.00e-01 -0.0477 0.0705 0.624 cDC L2
ENSG00000135525 MAP7 631436 sc-eQTL 3.88e-01 0.0713 0.0824 0.624 cDC L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 2.00e-01 0.0931 0.0723 0.624 cDC L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 9.35e-02 0.154 0.0913 0.624 cDC L2
ENSG00000286646 AL121933.2 398210 sc-eQTL 3.03e-02 -0.204 0.0934 0.624 cDC L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 2.03e-04 0.181 0.0478 0.628 cMono_IL1B L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 8.26e-01 0.0117 0.053 0.628 cMono_IL1B L2
ENSG00000112357 PEX7 359691 sc-eQTL 2.42e-02 0.199 0.0878 0.628 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 8.26e-01 0.0117 0.0532 0.628 cMono_IL1B L2
ENSG00000135525 MAP7 631436 sc-eQTL 8.69e-01 -0.0126 0.0766 0.628 cMono_IL1B L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 6.26e-01 0.027 0.0553 0.628 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 8.40e-01 -0.0115 0.0568 0.628 cMono_IL1B L2
ENSG00000286646 AL121933.2 398210 sc-eQTL 9.97e-01 0.000245 0.0711 0.628 cMono_IL1B L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 1.13e-02 0.144 0.0564 0.628 cMono_S100A L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 8.45e-02 0.101 0.0584 0.628 cMono_S100A L2
ENSG00000112357 PEX7 359691 sc-eQTL 3.67e-01 0.0829 0.0917 0.628 cMono_S100A L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 4.05e-01 0.0424 0.0508 0.628 cMono_S100A L2
ENSG00000135525 MAP7 631436 sc-eQTL 1.88e-01 0.113 0.0853 0.628 cMono_S100A L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 2.86e-01 -0.0738 0.069 0.628 cMono_S100A L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 9.23e-01 0.00707 0.073 0.628 cMono_S100A L2
ENSG00000286646 AL121933.2 398210 sc-eQTL 6.77e-01 -0.0297 0.0712 0.628 cMono_S100A L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 1.93e-01 0.111 0.085 0.618 gdT L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 9.87e-01 0.00127 0.0753 0.618 gdT L2
ENSG00000112357 PEX7 359691 sc-eQTL 9.73e-01 -0.00361 0.108 0.618 gdT L2
ENSG00000112378 PERP -925164 sc-eQTL 7.23e-02 0.169 0.0935 0.618 gdT L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 5.43e-01 0.032 0.0525 0.618 gdT L2
ENSG00000146410 MTFR2 931920 sc-eQTL 1.49e-02 0.2 0.0813 0.618 gdT L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 6.15e-01 -0.056 0.111 0.618 gdT L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 6.48e-01 -0.0435 0.0952 0.618 gdT L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 9.62e-02 0.101 0.0604 0.627 intMono L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 5.85e-01 0.0439 0.0802 0.627 intMono L2
ENSG00000112357 PEX7 359691 sc-eQTL 9.79e-01 -0.00217 0.082 0.627 intMono L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 5.47e-01 0.0317 0.0525 0.627 intMono L2
ENSG00000135525 MAP7 631436 sc-eQTL 2.69e-01 -0.0892 0.0804 0.627 intMono L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 3.34e-01 -0.0826 0.0852 0.627 intMono L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 6.19e-01 0.0389 0.0782 0.627 intMono L2
ENSG00000286646 AL121933.2 398210 sc-eQTL 6.68e-01 0.0387 0.0902 0.627 intMono L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 7.75e-04 0.235 0.0688 0.629 ncMono L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 5.77e-01 0.0307 0.055 0.629 ncMono L2
ENSG00000112357 PEX7 359691 sc-eQTL 8.20e-01 -0.02 0.0877 0.629 ncMono L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 4.49e-01 0.0475 0.0626 0.629 ncMono L2
ENSG00000135525 MAP7 631436 sc-eQTL 7.27e-01 -0.0271 0.0774 0.629 ncMono L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 2.91e-01 -0.086 0.0812 0.629 ncMono L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 9.05e-01 -0.00939 0.0784 0.629 ncMono L2
ENSG00000286646 AL121933.2 398210 sc-eQTL 1.93e-01 -0.107 0.0823 0.629 ncMono L2
ENSG00000027697 IFNGR1 -37194 sc-eQTL 6.77e-01 0.0352 0.0841 0.638 pDC L2
ENSG00000029363 BCLAF1 892404 sc-eQTL 6.70e-02 -0.115 0.0625 0.638 pDC L2
ENSG00000112357 PEX7 359691 sc-eQTL 9.50e-02 -0.154 0.0918 0.638 pDC L2
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 3.12e-01 -0.0789 0.0778 0.638 pDC L2
ENSG00000135525 MAP7 631436 sc-eQTL 6.72e-02 -0.118 0.064 0.638 pDC L2
ENSG00000197442 MAP3K5 389778 sc-eQTL 7.98e-01 0.0265 0.104 0.638 pDC L2
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 6.01e-01 -0.0415 0.0792 0.638 pDC L2
ENSG00000286646 AL121933.2 398210 sc-eQTL 9.65e-01 0.00422 0.0955 0.638 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -37194 sc-eQTL 7.05e-02 0.131 0.0721 0.628 B_Memory LOneK1K
ENSG00000029363 BCLAF1 892404 sc-eQTL 3.69e-01 -0.0366 0.0407 0.628 B_Memory LOneK1K
ENSG00000112357 PEX7 359691 sc-eQTL 1.55e-01 -0.119 0.0831 0.628 B_Memory LOneK1K
ENSG00000112378 PERP -925164 sc-eQTL 9.71e-01 -0.00282 0.0776 0.628 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 8.09e-01 0.0124 0.0512 0.628 B_Memory LOneK1K
ENSG00000197442 MAP3K5 389778 sc-eQTL 4.68e-02 -0.134 0.0672 0.628 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 1.93e-01 -0.113 0.0863 0.628 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -37194 sc-eQTL 6.82e-01 0.0303 0.074 0.628 B_Naive LOneK1K
ENSG00000029363 BCLAF1 892404 sc-eQTL 3.09e-01 -0.0346 0.0339 0.628 B_Naive LOneK1K
ENSG00000112357 PEX7 359691 sc-eQTL 6.55e-01 0.0402 0.09 0.628 B_Naive LOneK1K
ENSG00000112378 PERP -925164 sc-eQTL 4.60e-01 0.0596 0.0805 0.628 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 8.73e-01 -0.0068 0.0424 0.628 B_Naive LOneK1K
ENSG00000197442 MAP3K5 389778 sc-eQTL 7.26e-01 -0.0218 0.0621 0.628 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 6.48e-02 -0.139 0.0748 0.628 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -37194 sc-eQTL 1.71e-04 0.184 0.0481 0.628 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 892404 sc-eQTL 4.83e-01 0.0326 0.0463 0.628 CD14_Mono LOneK1K
ENSG00000112357 PEX7 359691 sc-eQTL 5.99e-02 0.168 0.0886 0.628 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 6.98e-01 0.0179 0.046 0.628 CD14_Mono LOneK1K
ENSG00000135525 MAP7 631436 sc-eQTL 3.47e-01 0.0751 0.0797 0.628 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 389778 sc-eQTL 8.91e-01 -0.0074 0.054 0.628 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 8.37e-01 0.0113 0.0552 0.628 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 398210 sc-eQTL 6.01e-01 -0.0337 0.0642 0.628 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -37194 sc-eQTL 4.18e-04 0.205 0.0572 0.627 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 892404 sc-eQTL 3.11e-01 0.054 0.0531 0.627 CD16_Mono LOneK1K
ENSG00000112357 PEX7 359691 sc-eQTL 8.73e-01 -0.0142 0.0889 0.627 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 9.26e-01 0.00513 0.055 0.627 CD16_Mono LOneK1K
ENSG00000135525 MAP7 631436 sc-eQTL 1.85e-01 -0.114 0.0856 0.627 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 389778 sc-eQTL 2.66e-01 -0.0785 0.0703 0.627 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 9.75e-01 -0.0023 0.0737 0.627 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 398210 sc-eQTL 6.34e-01 -0.0399 0.0837 0.627 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -37194 sc-eQTL 2.35e-02 0.126 0.055 0.627 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 892404 sc-eQTL 4.02e-01 0.0271 0.0323 0.627 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 359691 sc-eQTL 3.66e-01 -0.0849 0.0937 0.627 NK_CD56dim LOneK1K
ENSG00000112378 PERP -925164 sc-eQTL 1.03e-01 -0.0949 0.0579 0.627 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -684959 sc-eQTL 3.65e-01 -0.046 0.0506 0.627 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 389778 sc-eQTL 6.96e-02 -0.124 0.068 0.627 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -685978 sc-eQTL 4.00e-01 -0.0598 0.0709 0.627 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -37194 pQTL 0.000103 0.0636 0.0163 0.0 0.0 0.402
ENSG00000027697 IFNGR1 -37194 eQTL 3.84e-22 0.131 0.0132 0.0 0.0 0.412

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina