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Genes within 1Mb (chr6:137180919:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -38530 sc-eQTL 1.52e-01 0.1 0.0696 0.63 B L1
ENSG00000029363 BCLAF1 891068 sc-eQTL 1.49e-01 -0.0449 0.031 0.63 B L1
ENSG00000112357 PEX7 358355 sc-eQTL 8.94e-01 0.0111 0.0827 0.63 B L1
ENSG00000112378 PERP -926500 sc-eQTL 5.28e-01 -0.0346 0.0547 0.63 B L1
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 3.18e-01 -0.044 0.044 0.63 B L1
ENSG00000197442 MAP3K5 388442 sc-eQTL 5.63e-01 -0.0356 0.0614 0.63 B L1
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 1.36e-01 -0.103 0.069 0.63 B L1
ENSG00000027697 IFNGR1 -38530 sc-eQTL 6.61e-04 0.158 0.0456 0.63 CD4T L1
ENSG00000029363 BCLAF1 891068 sc-eQTL 2.39e-02 -0.0797 0.035 0.63 CD4T L1
ENSG00000112357 PEX7 358355 sc-eQTL 1.48e-02 0.183 0.0744 0.63 CD4T L1
ENSG00000112378 PERP -926500 sc-eQTL 6.51e-02 0.0932 0.0502 0.63 CD4T L1
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 5.31e-01 -0.0298 0.0474 0.63 CD4T L1
ENSG00000197442 MAP3K5 388442 sc-eQTL 1.78e-01 -0.0487 0.036 0.63 CD4T L1
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 4.06e-02 -0.122 0.0591 0.63 CD4T L1
ENSG00000027697 IFNGR1 -38530 sc-eQTL 1.10e-02 0.134 0.0522 0.63 CD8T L1
ENSG00000029363 BCLAF1 891068 sc-eQTL 7.35e-01 -0.0122 0.0358 0.63 CD8T L1
ENSG00000112357 PEX7 358355 sc-eQTL 7.74e-01 0.0254 0.0883 0.63 CD8T L1
ENSG00000112378 PERP -926500 sc-eQTL 2.91e-01 -0.0609 0.0576 0.63 CD8T L1
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 7.45e-01 -0.0145 0.0446 0.63 CD8T L1
ENSG00000197442 MAP3K5 388442 sc-eQTL 2.74e-01 -0.0515 0.047 0.63 CD8T L1
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 9.35e-01 -0.00536 0.0655 0.63 CD8T L1
ENSG00000027697 IFNGR1 -38530 sc-eQTL 1.65e-01 0.0893 0.0641 0.628 DC L1
ENSG00000029363 BCLAF1 891068 sc-eQTL 5.21e-01 -0.0372 0.0579 0.628 DC L1
ENSG00000112357 PEX7 358355 sc-eQTL 1.93e-02 -0.211 0.0895 0.628 DC L1
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 8.64e-01 -0.0118 0.0689 0.628 DC L1
ENSG00000135525 MAP7 630100 sc-eQTL 7.50e-01 0.0238 0.0746 0.628 DC L1
ENSG00000197442 MAP3K5 388442 sc-eQTL 3.74e-01 0.0635 0.0713 0.628 DC L1
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 5.73e-01 0.0396 0.0701 0.628 DC L1
ENSG00000286646 AL121933.2 396874 sc-eQTL 8.52e-02 -0.16 0.0926 0.628 DC L1
ENSG00000027697 IFNGR1 -38530 sc-eQTL 5.49e-05 0.211 0.0513 0.63 Mono L1
ENSG00000029363 BCLAF1 891068 sc-eQTL 8.34e-01 0.00956 0.0455 0.63 Mono L1
ENSG00000112357 PEX7 358355 sc-eQTL 8.75e-02 0.153 0.089 0.63 Mono L1
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 9.07e-01 -0.00528 0.0452 0.63 Mono L1
ENSG00000135525 MAP7 630100 sc-eQTL 7.55e-01 0.0247 0.0791 0.63 Mono L1
ENSG00000197442 MAP3K5 388442 sc-eQTL 6.22e-01 -0.0261 0.0527 0.63 Mono L1
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 7.29e-01 0.0194 0.056 0.63 Mono L1
ENSG00000286646 AL121933.2 396874 sc-eQTL 8.06e-01 -0.0157 0.0639 0.63 Mono L1
ENSG00000027697 IFNGR1 -38530 sc-eQTL 1.94e-02 0.138 0.0587 0.631 NK L1
ENSG00000029363 BCLAF1 891068 sc-eQTL 6.48e-01 0.0144 0.0315 0.631 NK L1
ENSG00000112357 PEX7 358355 sc-eQTL 1.01e-01 -0.15 0.0911 0.631 NK L1
ENSG00000112378 PERP -926500 sc-eQTL 2.77e-01 -0.0628 0.0576 0.631 NK L1
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 3.44e-01 -0.0468 0.0494 0.631 NK L1
ENSG00000197442 MAP3K5 388442 sc-eQTL 4.49e-02 -0.142 0.0702 0.631 NK L1
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 2.39e-01 -0.0825 0.0699 0.631 NK L1
ENSG00000027697 IFNGR1 -38530 sc-eQTL 5.46e-01 0.0339 0.056 0.63 Other_T L1
ENSG00000029363 BCLAF1 891068 sc-eQTL 8.27e-01 -0.0103 0.047 0.63 Other_T L1
ENSG00000112357 PEX7 358355 sc-eQTL 7.56e-01 -0.0284 0.0913 0.63 Other_T L1
ENSG00000112378 PERP -926500 sc-eQTL 1.53e-01 0.105 0.073 0.63 Other_T L1
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 7.15e-01 -0.0127 0.0349 0.63 Other_T L1
ENSG00000146410 MTFR2 930584 sc-eQTL 9.41e-01 0.00392 0.0528 0.63 Other_T L1
ENSG00000197442 MAP3K5 388442 sc-eQTL 1.64e-01 -0.0937 0.067 0.63 Other_T L1
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 7.59e-01 0.0213 0.0692 0.63 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -38530 sc-eQTL 3.21e-01 0.0935 0.094 0.64 B_Activated L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 7.86e-01 -0.0208 0.0765 0.64 B_Activated L2
ENSG00000112357 PEX7 358355 sc-eQTL 2.62e-01 0.104 0.0924 0.64 B_Activated L2
ENSG00000112378 PERP -926500 sc-eQTL 7.04e-01 -0.0183 0.048 0.64 B_Activated L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 5.55e-01 -0.0549 0.093 0.64 B_Activated L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 1.54e-01 -0.148 0.104 0.64 B_Activated L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 2.22e-02 -0.185 0.0801 0.64 B_Activated L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 2.78e-01 0.0899 0.0827 0.633 B_Intermediate L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 1.38e-01 -0.0699 0.0469 0.633 B_Intermediate L2
ENSG00000112357 PEX7 358355 sc-eQTL 3.67e-01 -0.0782 0.0866 0.633 B_Intermediate L2
ENSG00000112378 PERP -926500 sc-eQTL 7.52e-01 0.025 0.0791 0.633 B_Intermediate L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 8.94e-01 -0.00828 0.062 0.633 B_Intermediate L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 8.91e-02 -0.127 0.0745 0.633 B_Intermediate L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 1.69e-01 -0.121 0.0876 0.633 B_Intermediate L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 3.51e-01 0.0853 0.0913 0.629 B_Memory L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 4.60e-01 -0.0402 0.0542 0.629 B_Memory L2
ENSG00000112357 PEX7 358355 sc-eQTL 2.32e-01 -0.11 0.0921 0.629 B_Memory L2
ENSG00000112378 PERP -926500 sc-eQTL 9.76e-01 -0.00264 0.0869 0.629 B_Memory L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 6.09e-01 -0.0306 0.0598 0.629 B_Memory L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 8.76e-01 -0.0128 0.0817 0.629 B_Memory L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 9.92e-01 -0.000844 0.089 0.629 B_Memory L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 2.34e-01 0.0841 0.0704 0.63 B_Naive1 L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 4.14e-01 -0.033 0.0403 0.63 B_Naive1 L2
ENSG00000112357 PEX7 358355 sc-eQTL 9.85e-01 -0.00178 0.0932 0.63 B_Naive1 L2
ENSG00000112378 PERP -926500 sc-eQTL 4.20e-01 0.0658 0.0814 0.63 B_Naive1 L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 6.24e-01 -0.0232 0.0473 0.63 B_Naive1 L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 6.94e-01 0.0262 0.0664 0.63 B_Naive1 L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 2.65e-01 -0.0825 0.0739 0.63 B_Naive1 L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 3.19e-01 -0.0859 0.0861 0.631 B_Naive2 L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 4.63e-01 -0.0368 0.05 0.631 B_Naive2 L2
ENSG00000112357 PEX7 358355 sc-eQTL 7.58e-01 0.0291 0.0944 0.631 B_Naive2 L2
ENSG00000112378 PERP -926500 sc-eQTL 2.96e-01 -0.0719 0.0686 0.631 B_Naive2 L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 7.34e-01 -0.0233 0.0687 0.631 B_Naive2 L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 2.13e-01 -0.0909 0.0729 0.631 B_Naive2 L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 4.27e-01 -0.0706 0.0887 0.631 B_Naive2 L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 4.36e-01 0.0632 0.081 0.634 CD4_CTL L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 2.90e-01 -0.0761 0.0717 0.634 CD4_CTL L2
ENSG00000112357 PEX7 358355 sc-eQTL 4.26e-01 0.0716 0.0898 0.634 CD4_CTL L2
ENSG00000112378 PERP -926500 sc-eQTL 5.33e-01 0.0568 0.0911 0.634 CD4_CTL L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 2.10e-01 -0.0666 0.053 0.634 CD4_CTL L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 1.88e-01 -0.112 0.0845 0.634 CD4_CTL L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 8.83e-01 0.0122 0.0827 0.634 CD4_CTL L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 5.14e-02 0.086 0.0439 0.63 CD4_Naive L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 8.31e-02 -0.0615 0.0353 0.63 CD4_Naive L2
ENSG00000112357 PEX7 358355 sc-eQTL 1.80e-02 0.197 0.0825 0.63 CD4_Naive L2
ENSG00000112378 PERP -926500 sc-eQTL 8.24e-02 0.12 0.0685 0.63 CD4_Naive L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 8.47e-01 -0.00933 0.0484 0.63 CD4_Naive L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 1.50e-01 -0.0511 0.0354 0.63 CD4_Naive L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 2.33e-02 -0.142 0.062 0.63 CD4_Naive L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 2.94e-02 0.137 0.0624 0.63 CD4_TCM L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 9.04e-02 -0.0673 0.0395 0.63 CD4_TCM L2
ENSG00000112357 PEX7 358355 sc-eQTL 3.43e-01 0.0878 0.0924 0.63 CD4_TCM L2
ENSG00000112378 PERP -926500 sc-eQTL 3.27e-01 0.0767 0.0781 0.63 CD4_TCM L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 3.35e-01 -0.0438 0.0453 0.63 CD4_TCM L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 9.72e-01 -0.00181 0.0518 0.63 CD4_TCM L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 9.76e-01 -0.00194 0.0637 0.63 CD4_TCM L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 1.63e-02 0.169 0.0697 0.63 CD4_TEM L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 1.10e-01 -0.08 0.0498 0.63 CD4_TEM L2
ENSG00000112357 PEX7 358355 sc-eQTL 3.59e-01 0.0837 0.0911 0.63 CD4_TEM L2
ENSG00000112378 PERP -926500 sc-eQTL 3.78e-01 0.0652 0.0738 0.63 CD4_TEM L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 6.41e-01 -0.0219 0.0469 0.63 CD4_TEM L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 1.63e-01 -0.101 0.0722 0.63 CD4_TEM L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 9.83e-01 -0.00157 0.0753 0.63 CD4_TEM L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 3.45e-02 0.132 0.0622 0.63 CD8_CTL L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 1.43e-01 -0.0613 0.0417 0.63 CD8_CTL L2
ENSG00000112357 PEX7 358355 sc-eQTL 6.72e-01 -0.0366 0.0865 0.63 CD8_CTL L2
ENSG00000112378 PERP -926500 sc-eQTL 6.67e-02 -0.152 0.0825 0.63 CD8_CTL L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 2.59e-01 -0.0598 0.0528 0.63 CD8_CTL L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 3.44e-01 -0.0706 0.0745 0.63 CD8_CTL L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 7.32e-01 0.0255 0.0744 0.63 CD8_CTL L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 9.39e-03 0.164 0.0625 0.63 CD8_Naive L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 6.13e-01 0.0224 0.0443 0.63 CD8_Naive L2
ENSG00000112357 PEX7 358355 sc-eQTL 3.14e-01 0.0927 0.0918 0.63 CD8_Naive L2
ENSG00000112378 PERP -926500 sc-eQTL 1.74e-01 0.0951 0.0696 0.63 CD8_Naive L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 9.15e-01 0.00533 0.0497 0.63 CD8_Naive L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 2.00e-02 -0.136 0.0581 0.63 CD8_Naive L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 5.75e-01 -0.0412 0.0734 0.63 CD8_Naive L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 1.74e-01 0.115 0.0843 0.637 CD8_TCM L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 6.04e-01 -0.033 0.0635 0.637 CD8_TCM L2
ENSG00000112357 PEX7 358355 sc-eQTL 9.26e-01 0.00907 0.0972 0.637 CD8_TCM L2
ENSG00000112378 PERP -926500 sc-eQTL 6.08e-01 -0.0489 0.0952 0.637 CD8_TCM L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 1.83e-01 -0.0611 0.0457 0.637 CD8_TCM L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 5.32e-01 -0.0512 0.0819 0.637 CD8_TCM L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 4.10e-02 0.171 0.0831 0.637 CD8_TCM L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 5.06e-01 0.0529 0.0795 0.639 CD8_TEM L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 3.43e-01 -0.0713 0.0749 0.639 CD8_TEM L2
ENSG00000112357 PEX7 358355 sc-eQTL 7.92e-01 0.0241 0.0916 0.639 CD8_TEM L2
ENSG00000112378 PERP -926500 sc-eQTL 7.31e-02 0.17 0.0944 0.639 CD8_TEM L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 8.57e-01 -0.0106 0.0587 0.639 CD8_TEM L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 1.22e-01 -0.14 0.0902 0.639 CD8_TEM L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 7.06e-01 -0.0328 0.087 0.639 CD8_TEM L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 3.05e-01 0.0664 0.0645 0.63 MAIT L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 3.46e-01 -0.0507 0.0536 0.63 MAIT L2
ENSG00000112357 PEX7 358355 sc-eQTL 5.08e-01 -0.0581 0.0876 0.63 MAIT L2
ENSG00000112378 PERP -926500 sc-eQTL 2.27e-02 0.207 0.0903 0.63 MAIT L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 3.74e-01 -0.0387 0.0434 0.63 MAIT L2
ENSG00000146410 MTFR2 930584 sc-eQTL 1.77e-01 -0.0978 0.0722 0.63 MAIT L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 1.93e-01 -0.0987 0.0755 0.63 MAIT L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 9.55e-01 -0.00454 0.0805 0.63 MAIT L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 1.84e-01 0.0924 0.0693 0.624 NK_CD56bright L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 3.01e-01 -0.0531 0.0512 0.624 NK_CD56bright L2
ENSG00000112357 PEX7 358355 sc-eQTL 1.13e-01 -0.144 0.0902 0.624 NK_CD56bright L2
ENSG00000112378 PERP -926500 sc-eQTL 2.66e-01 0.0904 0.081 0.624 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 5.94e-01 -0.0276 0.0518 0.624 NK_CD56bright L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 3.59e-02 -0.165 0.078 0.624 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 4.90e-03 -0.231 0.081 0.624 NK_CD56bright L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 2.39e-02 0.123 0.0541 0.629 NK_CD56dim L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 2.40e-01 0.042 0.0357 0.629 NK_CD56dim L2
ENSG00000112357 PEX7 358355 sc-eQTL 6.51e-01 -0.0428 0.0943 0.629 NK_CD56dim L2
ENSG00000112378 PERP -926500 sc-eQTL 7.36e-01 0.0224 0.0663 0.629 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 3.29e-01 -0.0504 0.0514 0.629 NK_CD56dim L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 7.51e-02 -0.132 0.0737 0.629 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 9.18e-01 0.00799 0.0772 0.629 NK_CD56dim L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 4.36e-02 0.142 0.07 0.616 NK_HLA L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 4.35e-01 0.0468 0.0598 0.616 NK_HLA L2
ENSG00000112357 PEX7 358355 sc-eQTL 3.71e-01 -0.0804 0.0897 0.616 NK_HLA L2
ENSG00000112378 PERP -926500 sc-eQTL 7.88e-02 -0.128 0.0723 0.616 NK_HLA L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 8.77e-01 0.0087 0.0561 0.616 NK_HLA L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 7.89e-02 -0.156 0.0884 0.616 NK_HLA L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 1.88e-01 -0.119 0.09 0.616 NK_HLA L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 9.68e-03 0.148 0.0567 0.629 NK_cytokine L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 9.83e-01 0.000923 0.043 0.629 NK_cytokine L2
ENSG00000112357 PEX7 358355 sc-eQTL 7.25e-01 -0.0319 0.0904 0.629 NK_cytokine L2
ENSG00000112378 PERP -926500 sc-eQTL 4.69e-01 -0.0497 0.0685 0.629 NK_cytokine L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 3.44e-01 -0.0487 0.0513 0.629 NK_cytokine L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 1.48e-01 -0.102 0.0703 0.629 NK_cytokine L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 1.61e-01 -0.109 0.0772 0.629 NK_cytokine L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 3.42e-01 0.108 0.113 0.615 PB L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 8.87e-01 -0.014 0.0983 0.615 PB L2
ENSG00000112357 PEX7 358355 sc-eQTL 6.64e-01 0.051 0.117 0.615 PB L2
ENSG00000112378 PERP -926500 sc-eQTL 9.11e-01 -0.00822 0.073 0.615 PB L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 1.00e+00 -2.45e-05 0.0886 0.615 PB L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 5.08e-02 0.196 0.0991 0.615 PB L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 7.05e-02 0.191 0.105 0.615 PB L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 9.63e-01 -0.00336 0.0718 0.63 Pro_T L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 8.52e-01 -0.0139 0.0744 0.63 Pro_T L2
ENSG00000112357 PEX7 358355 sc-eQTL 6.20e-01 0.0433 0.0871 0.63 Pro_T L2
ENSG00000112378 PERP -926500 sc-eQTL 9.12e-01 -0.00763 0.0693 0.63 Pro_T L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 2.06e-01 -0.0552 0.0436 0.63 Pro_T L2
ENSG00000146410 MTFR2 930584 sc-eQTL 4.53e-01 0.0455 0.0605 0.63 Pro_T L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 2.65e-01 -0.0944 0.0844 0.63 Pro_T L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 1.53e-01 0.121 0.0844 0.63 Pro_T L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 6.25e-02 0.156 0.0833 0.63 Treg L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 3.55e-02 -0.114 0.0537 0.63 Treg L2
ENSG00000112357 PEX7 358355 sc-eQTL 1.42e-01 0.13 0.0882 0.63 Treg L2
ENSG00000112378 PERP -926500 sc-eQTL 1.39e-01 0.142 0.0954 0.63 Treg L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 7.40e-01 -0.0177 0.0533 0.63 Treg L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 4.04e-01 0.0483 0.0577 0.63 Treg L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 2.06e-01 -0.103 0.0811 0.63 Treg L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 4.58e-01 0.0534 0.0719 0.627 cDC L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 3.07e-01 0.0741 0.0723 0.627 cDC L2
ENSG00000112357 PEX7 358355 sc-eQTL 1.37e-01 -0.138 0.0926 0.627 cDC L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 4.04e-01 -0.0593 0.0708 0.627 cDC L2
ENSG00000135525 MAP7 630100 sc-eQTL 4.54e-01 0.0622 0.0828 0.627 cDC L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 2.27e-01 0.0881 0.0727 0.627 cDC L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 1.15e-01 0.145 0.0918 0.627 cDC L2
ENSG00000286646 AL121933.2 396874 sc-eQTL 2.82e-02 -0.208 0.0938 0.627 cDC L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 1.62e-04 0.185 0.0481 0.63 cMono_IL1B L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 8.76e-01 0.00835 0.0533 0.63 cMono_IL1B L2
ENSG00000112357 PEX7 358355 sc-eQTL 2.69e-02 0.197 0.0884 0.63 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 9.62e-01 0.00253 0.0535 0.63 cMono_IL1B L2
ENSG00000135525 MAP7 630100 sc-eQTL 8.18e-01 -0.0178 0.077 0.63 cMono_IL1B L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 5.83e-01 0.0305 0.0556 0.63 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 8.02e-01 -0.0144 0.0571 0.63 cMono_IL1B L2
ENSG00000286646 AL121933.2 396874 sc-eQTL 9.54e-01 -0.00418 0.0715 0.63 cMono_IL1B L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 1.02e-02 0.147 0.0567 0.63 cMono_S100A L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 9.22e-02 0.0994 0.0588 0.63 cMono_S100A L2
ENSG00000112357 PEX7 358355 sc-eQTL 2.60e-01 0.104 0.0921 0.63 cMono_S100A L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 5.67e-01 0.0293 0.0511 0.63 cMono_S100A L2
ENSG00000135525 MAP7 630100 sc-eQTL 1.94e-01 0.112 0.0858 0.63 cMono_S100A L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 3.36e-01 -0.0669 0.0694 0.63 cMono_S100A L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 9.50e-01 -0.00458 0.0735 0.63 cMono_S100A L2
ENSG00000286646 AL121933.2 396874 sc-eQTL 6.13e-01 -0.0363 0.0717 0.63 cMono_S100A L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 1.54e-01 0.123 0.086 0.621 gdT L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 9.69e-01 -0.00301 0.0763 0.621 gdT L2
ENSG00000112357 PEX7 358355 sc-eQTL 9.00e-01 -0.0139 0.11 0.621 gdT L2
ENSG00000112378 PERP -926500 sc-eQTL 6.35e-02 0.177 0.0947 0.621 gdT L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 4.65e-01 0.039 0.0532 0.621 gdT L2
ENSG00000146410 MTFR2 930584 sc-eQTL 1.69e-02 0.199 0.0824 0.621 gdT L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 4.76e-01 -0.0804 0.113 0.621 gdT L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 6.52e-01 -0.0435 0.0965 0.621 gdT L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 7.04e-02 0.11 0.0607 0.629 intMono L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 7.27e-01 0.0282 0.0808 0.629 intMono L2
ENSG00000112357 PEX7 358355 sc-eQTL 9.42e-01 -0.00596 0.0825 0.629 intMono L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 5.99e-01 0.0278 0.0528 0.629 intMono L2
ENSG00000135525 MAP7 630100 sc-eQTL 2.37e-01 -0.096 0.0809 0.629 intMono L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 3.85e-01 -0.0747 0.0858 0.629 intMono L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 7.20e-01 0.0283 0.0787 0.629 intMono L2
ENSG00000286646 AL121933.2 396874 sc-eQTL 7.11e-01 0.0337 0.0908 0.629 intMono L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 6.49e-04 0.24 0.0694 0.631 ncMono L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 4.88e-01 0.0385 0.0554 0.631 ncMono L2
ENSG00000112357 PEX7 358355 sc-eQTL 8.34e-01 -0.0185 0.0885 0.631 ncMono L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 4.43e-01 0.0486 0.0631 0.631 ncMono L2
ENSG00000135525 MAP7 630100 sc-eQTL 6.40e-01 -0.0366 0.0781 0.631 ncMono L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 2.81e-01 -0.0886 0.0819 0.631 ncMono L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 9.14e-01 -0.00852 0.0791 0.631 ncMono L2
ENSG00000286646 AL121933.2 396874 sc-eQTL 2.32e-01 -0.0996 0.0831 0.631 ncMono L2
ENSG00000027697 IFNGR1 -38530 sc-eQTL 6.77e-01 0.0352 0.0841 0.638 pDC L2
ENSG00000029363 BCLAF1 891068 sc-eQTL 6.70e-02 -0.115 0.0625 0.638 pDC L2
ENSG00000112357 PEX7 358355 sc-eQTL 9.50e-02 -0.154 0.0918 0.638 pDC L2
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 3.12e-01 -0.0789 0.0778 0.638 pDC L2
ENSG00000135525 MAP7 630100 sc-eQTL 6.72e-02 -0.118 0.064 0.638 pDC L2
ENSG00000197442 MAP3K5 388442 sc-eQTL 7.98e-01 0.0265 0.104 0.638 pDC L2
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 6.01e-01 -0.0415 0.0792 0.638 pDC L2
ENSG00000286646 AL121933.2 396874 sc-eQTL 9.65e-01 0.00422 0.0955 0.638 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -38530 sc-eQTL 5.74e-02 0.139 0.0725 0.63 B_Memory LOneK1K
ENSG00000029363 BCLAF1 891068 sc-eQTL 3.03e-01 -0.0423 0.041 0.63 B_Memory LOneK1K
ENSG00000112357 PEX7 358355 sc-eQTL 1.65e-01 -0.117 0.0837 0.63 B_Memory LOneK1K
ENSG00000112378 PERP -926500 sc-eQTL 9.21e-01 -0.00775 0.0782 0.63 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 8.46e-01 0.01 0.0516 0.63 B_Memory LOneK1K
ENSG00000197442 MAP3K5 388442 sc-eQTL 5.48e-02 -0.131 0.0677 0.63 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 1.96e-01 -0.113 0.0869 0.63 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -38530 sc-eQTL 6.73e-01 0.0315 0.0746 0.63 B_Naive LOneK1K
ENSG00000029363 BCLAF1 891068 sc-eQTL 2.96e-01 -0.0358 0.0342 0.63 B_Naive LOneK1K
ENSG00000112357 PEX7 358355 sc-eQTL 6.64e-01 0.0394 0.0908 0.63 B_Naive LOneK1K
ENSG00000112378 PERP -926500 sc-eQTL 5.52e-01 0.0484 0.0812 0.63 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 8.96e-01 -0.00562 0.0427 0.63 B_Naive LOneK1K
ENSG00000197442 MAP3K5 388442 sc-eQTL 8.73e-01 -0.01 0.0626 0.63 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 7.39e-02 -0.136 0.0755 0.63 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -38530 sc-eQTL 1.21e-04 0.189 0.0483 0.63 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 891068 sc-eQTL 5.19e-01 0.0301 0.0466 0.63 CD14_Mono LOneK1K
ENSG00000112357 PEX7 358355 sc-eQTL 4.23e-02 0.182 0.089 0.63 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 8.55e-01 0.00848 0.0463 0.63 CD14_Mono LOneK1K
ENSG00000135525 MAP7 630100 sc-eQTL 3.71e-01 0.0719 0.0802 0.63 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 388442 sc-eQTL 9.47e-01 -0.00361 0.0543 0.63 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 9.19e-01 0.00564 0.0555 0.63 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 396874 sc-eQTL 5.44e-01 -0.0393 0.0645 0.63 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -38530 sc-eQTL 2.73e-04 0.213 0.0575 0.629 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 891068 sc-eQTL 3.35e-01 0.0517 0.0535 0.629 CD16_Mono LOneK1K
ENSG00000112357 PEX7 358355 sc-eQTL 8.88e-01 -0.0126 0.0896 0.629 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 9.42e-01 0.00407 0.0555 0.629 CD16_Mono LOneK1K
ENSG00000135525 MAP7 630100 sc-eQTL 1.60e-01 -0.121 0.0862 0.629 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 388442 sc-eQTL 2.76e-01 -0.0774 0.0709 0.629 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 8.98e-01 -0.00952 0.0743 0.629 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 396874 sc-eQTL 6.96e-01 -0.033 0.0844 0.629 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -38530 sc-eQTL 2.76e-02 0.123 0.0554 0.629 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 891068 sc-eQTL 4.83e-01 0.0228 0.0325 0.629 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 358355 sc-eQTL 3.46e-01 -0.0892 0.0944 0.629 NK_CD56dim LOneK1K
ENSG00000112378 PERP -926500 sc-eQTL 1.26e-01 -0.0896 0.0584 0.629 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -686295 sc-eQTL 3.51e-01 -0.0476 0.051 0.629 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 388442 sc-eQTL 6.18e-02 -0.129 0.0685 0.629 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -687314 sc-eQTL 3.19e-01 -0.0712 0.0713 0.629 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -38530 pQTL 0.000121 0.0617 0.016 0.0 0.0 0.404
ENSG00000027697 IFNGR1 -38530 eQTL 6.19e-20 0.121 0.013 0.0 0.0 0.414

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -38530 8.39e-06 9.73e-06 1.35e-06 5.03e-06 1.9e-06 3.9e-06 9.61e-06 1.44e-06 6.04e-06 4.19e-06 1.04e-05 4.49e-06 1.3e-05 3.95e-06 1.55e-06 5.33e-06 3.74e-06 5.21e-06 2.61e-06 2.59e-06 4.39e-06 7.71e-06 6.79e-06 1.95e-06 1.28e-05 2.79e-06 3.73e-06 2.36e-06 7.67e-06 7.98e-06 4.61e-06 4.61e-07 7.83e-07 2.75e-06 3.7e-06 2.03e-06 1.47e-06 1.19e-06 1.61e-06 7.35e-07 7.69e-07 1.3e-05 8.87e-07 1.52e-07 7.75e-07 8.06e-07 1.03e-06 7.43e-07 5.98e-07