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Genes within 1Mb (chr6:137179579:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -39870 sc-eQTL 2.16e-03 0.203 0.0655 0.476 B L1
ENSG00000029363 BCLAF1 889728 sc-eQTL 1.66e-01 -0.0413 0.0297 0.476 B L1
ENSG00000112357 PEX7 357015 sc-eQTL 5.80e-01 -0.0439 0.0793 0.476 B L1
ENSG00000112378 PERP -927840 sc-eQTL 7.33e-01 -0.0179 0.0525 0.476 B L1
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 3.61e-01 -0.0386 0.0422 0.476 B L1
ENSG00000197442 MAP3K5 387102 sc-eQTL 5.06e-01 -0.0392 0.0589 0.476 B L1
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 3.61e-01 -0.0608 0.0664 0.476 B L1
ENSG00000027697 IFNGR1 -39870 sc-eQTL 1.33e-05 0.188 0.0422 0.476 CD4T L1
ENSG00000029363 BCLAF1 889728 sc-eQTL 1.50e-01 -0.0481 0.0333 0.476 CD4T L1
ENSG00000112357 PEX7 357015 sc-eQTL 7.42e-02 0.127 0.0706 0.476 CD4T L1
ENSG00000112378 PERP -927840 sc-eQTL 6.95e-02 0.0865 0.0474 0.476 CD4T L1
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 9.60e-01 0.00223 0.0448 0.476 CD4T L1
ENSG00000197442 MAP3K5 387102 sc-eQTL 7.63e-01 0.0103 0.0341 0.476 CD4T L1
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 8.98e-01 -0.00721 0.0564 0.476 CD4T L1
ENSG00000027697 IFNGR1 -39870 sc-eQTL 3.88e-03 0.145 0.0495 0.476 CD8T L1
ENSG00000029363 BCLAF1 889728 sc-eQTL 6.48e-01 -0.0156 0.0342 0.476 CD8T L1
ENSG00000112357 PEX7 357015 sc-eQTL 7.96e-01 -0.0218 0.0842 0.476 CD8T L1
ENSG00000112378 PERP -927840 sc-eQTL 7.65e-01 -0.0165 0.055 0.476 CD8T L1
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 8.54e-01 -0.00784 0.0425 0.476 CD8T L1
ENSG00000197442 MAP3K5 387102 sc-eQTL 5.75e-01 -0.0252 0.0449 0.476 CD8T L1
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 6.89e-01 0.025 0.0624 0.476 CD8T L1
ENSG00000027697 IFNGR1 -39870 sc-eQTL 2.42e-01 0.0729 0.0621 0.473 DC L1
ENSG00000029363 BCLAF1 889728 sc-eQTL 2.90e-01 -0.0593 0.0559 0.473 DC L1
ENSG00000112357 PEX7 357015 sc-eQTL 4.60e-01 -0.065 0.0877 0.473 DC L1
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 9.75e-01 -0.00211 0.0666 0.473 DC L1
ENSG00000135525 MAP7 628760 sc-eQTL 4.08e-01 0.0597 0.072 0.473 DC L1
ENSG00000197442 MAP3K5 387102 sc-eQTL 9.68e-01 0.00281 0.0692 0.473 DC L1
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 5.90e-01 0.0366 0.0679 0.473 DC L1
ENSG00000286646 AL121933.2 395534 sc-eQTL 1.70e-01 -0.124 0.0898 0.473 DC L1
ENSG00000027697 IFNGR1 -39870 sc-eQTL 7.02e-09 0.284 0.047 0.476 Mono L1
ENSG00000029363 BCLAF1 889728 sc-eQTL 4.61e-01 -0.0321 0.0434 0.476 Mono L1
ENSG00000112357 PEX7 357015 sc-eQTL 1.98e-02 0.198 0.0845 0.476 Mono L1
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 9.64e-01 0.00195 0.0432 0.476 Mono L1
ENSG00000135525 MAP7 628760 sc-eQTL 6.92e-01 0.0299 0.0755 0.476 Mono L1
ENSG00000197442 MAP3K5 387102 sc-eQTL 9.64e-01 -0.00225 0.0504 0.476 Mono L1
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 9.80e-01 0.00137 0.0535 0.476 Mono L1
ENSG00000286646 AL121933.2 395534 sc-eQTL 2.58e-01 -0.0689 0.0608 0.476 Mono L1
ENSG00000027697 IFNGR1 -39870 sc-eQTL 1.19e-03 0.181 0.0551 0.476 NK L1
ENSG00000029363 BCLAF1 889728 sc-eQTL 6.14e-01 0.0151 0.03 0.476 NK L1
ENSG00000112357 PEX7 357015 sc-eQTL 8.86e-02 -0.148 0.0866 0.476 NK L1
ENSG00000112378 PERP -927840 sc-eQTL 3.36e-01 -0.0528 0.0548 0.476 NK L1
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 9.89e-01 0.000671 0.047 0.476 NK L1
ENSG00000197442 MAP3K5 387102 sc-eQTL 2.01e-01 -0.086 0.0671 0.476 NK L1
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 5.68e-01 -0.0381 0.0666 0.476 NK L1
ENSG00000027697 IFNGR1 -39870 sc-eQTL 1.44e-01 0.0775 0.0529 0.476 Other_T L1
ENSG00000029363 BCLAF1 889728 sc-eQTL 3.32e-01 0.0433 0.0445 0.476 Other_T L1
ENSG00000112357 PEX7 357015 sc-eQTL 9.09e-01 -0.00987 0.0867 0.476 Other_T L1
ENSG00000112378 PERP -927840 sc-eQTL 4.93e-01 0.0477 0.0695 0.476 Other_T L1
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 8.85e-01 0.00477 0.0331 0.476 Other_T L1
ENSG00000146410 MTFR2 929244 sc-eQTL 5.74e-01 0.0282 0.0501 0.476 Other_T L1
ENSG00000197442 MAP3K5 387102 sc-eQTL 6.62e-01 -0.028 0.0639 0.476 Other_T L1
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 4.48e-01 0.0499 0.0656 0.476 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -39870 sc-eQTL 1.32e-01 0.134 0.0888 0.48 B_Activated L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 6.82e-01 -0.0297 0.0725 0.48 B_Activated L2
ENSG00000112357 PEX7 357015 sc-eQTL 7.63e-01 -0.0265 0.0879 0.48 B_Activated L2
ENSG00000112378 PERP -927840 sc-eQTL 8.07e-01 -0.0111 0.0455 0.48 B_Activated L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 7.89e-02 -0.155 0.0874 0.48 B_Activated L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 3.57e-01 -0.0911 0.0985 0.48 B_Activated L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 1.64e-02 -0.184 0.0758 0.48 B_Activated L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 1.42e-01 0.115 0.0783 0.479 B_Intermediate L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 4.07e-01 -0.0372 0.0447 0.479 B_Intermediate L2
ENSG00000112357 PEX7 357015 sc-eQTL 7.64e-02 -0.146 0.0817 0.479 B_Intermediate L2
ENSG00000112378 PERP -927840 sc-eQTL 2.33e-01 0.0895 0.0748 0.479 B_Intermediate L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 9.39e-01 -0.00453 0.0589 0.479 B_Intermediate L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 4.06e-01 -0.0592 0.0711 0.479 B_Intermediate L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 5.27e-01 -0.0529 0.0835 0.479 B_Intermediate L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 2.15e-01 0.107 0.0857 0.474 B_Memory L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 1.88e-01 -0.0673 0.0509 0.474 B_Memory L2
ENSG00000112357 PEX7 357015 sc-eQTL 2.39e-01 -0.102 0.0866 0.474 B_Memory L2
ENSG00000112378 PERP -927840 sc-eQTL 3.06e-01 -0.0838 0.0815 0.474 B_Memory L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 5.23e-01 -0.036 0.0562 0.474 B_Memory L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 4.33e-01 -0.0603 0.0767 0.474 B_Memory L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 6.26e-01 0.0408 0.0837 0.474 B_Memory L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 6.18e-03 0.184 0.0665 0.476 B_Naive1 L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 7.81e-01 -0.0108 0.0387 0.476 B_Naive1 L2
ENSG00000112357 PEX7 357015 sc-eQTL 9.66e-01 -0.00377 0.0894 0.476 B_Naive1 L2
ENSG00000112378 PERP -927840 sc-eQTL 8.54e-01 0.0144 0.0781 0.476 B_Naive1 L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 2.06e-01 -0.0572 0.0452 0.476 B_Naive1 L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 6.93e-01 -0.0252 0.0637 0.476 B_Naive1 L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 5.09e-01 -0.0469 0.0709 0.476 B_Naive1 L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 6.62e-01 0.0363 0.0828 0.476 B_Naive2 L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 7.73e-01 -0.0138 0.048 0.476 B_Naive2 L2
ENSG00000112357 PEX7 357015 sc-eQTL 6.59e-01 -0.0401 0.0906 0.476 B_Naive2 L2
ENSG00000112378 PERP -927840 sc-eQTL 7.92e-01 -0.0174 0.066 0.476 B_Naive2 L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 8.50e-01 0.0125 0.066 0.476 B_Naive2 L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 9.10e-01 -0.00796 0.0702 0.476 B_Naive2 L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 9.06e-01 0.0101 0.0853 0.476 B_Naive2 L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 3.79e-01 0.0685 0.0777 0.482 CD4_CTL L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 1.82e-01 -0.0922 0.0688 0.482 CD4_CTL L2
ENSG00000112357 PEX7 357015 sc-eQTL 4.30e-01 0.0682 0.0862 0.482 CD4_CTL L2
ENSG00000112378 PERP -927840 sc-eQTL 9.14e-01 -0.00942 0.0875 0.482 CD4_CTL L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 1.67e-01 -0.0704 0.0508 0.482 CD4_CTL L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 3.68e-01 -0.0733 0.0813 0.482 CD4_CTL L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 6.49e-01 0.0362 0.0794 0.482 CD4_CTL L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 4.14e-03 0.119 0.0412 0.476 CD4_Naive L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 4.87e-01 -0.0234 0.0337 0.476 CD4_Naive L2
ENSG00000112357 PEX7 357015 sc-eQTL 1.78e-01 0.107 0.0789 0.476 CD4_Naive L2
ENSG00000112378 PERP -927840 sc-eQTL 3.41e-01 0.0623 0.0653 0.476 CD4_Naive L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 7.12e-01 0.0169 0.0459 0.476 CD4_Naive L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 5.88e-01 0.0183 0.0337 0.476 CD4_Naive L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 9.27e-01 -0.00548 0.0594 0.476 CD4_Naive L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 8.45e-03 0.154 0.058 0.476 CD4_TCM L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 6.40e-02 -0.0688 0.0369 0.476 CD4_TCM L2
ENSG00000112357 PEX7 357015 sc-eQTL 9.95e-01 0.000567 0.0866 0.476 CD4_TCM L2
ENSG00000112378 PERP -927840 sc-eQTL 1.60e-01 0.103 0.0729 0.476 CD4_TCM L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 9.70e-01 -0.0016 0.0425 0.476 CD4_TCM L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 3.32e-01 0.0469 0.0483 0.476 CD4_TCM L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 7.63e-01 0.018 0.0596 0.476 CD4_TCM L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 1.93e-04 0.245 0.0645 0.476 CD4_TEM L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 5.90e-01 -0.0255 0.0473 0.476 CD4_TEM L2
ENSG00000112357 PEX7 357015 sc-eQTL 2.17e-01 0.106 0.0858 0.476 CD4_TEM L2
ENSG00000112378 PERP -927840 sc-eQTL 7.54e-02 0.124 0.0693 0.476 CD4_TEM L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 9.98e-01 0.000119 0.0443 0.476 CD4_TEM L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 4.64e-01 -0.0501 0.0684 0.476 CD4_TEM L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 4.83e-01 0.0499 0.071 0.476 CD4_TEM L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 1.19e-01 0.0944 0.0602 0.476 CD8_CTL L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 1.46e-01 -0.0587 0.0402 0.476 CD8_CTL L2
ENSG00000112357 PEX7 357015 sc-eQTL 2.97e-01 -0.0868 0.0831 0.476 CD8_CTL L2
ENSG00000112378 PERP -927840 sc-eQTL 2.94e-01 -0.0841 0.0799 0.476 CD8_CTL L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 4.63e-01 -0.0374 0.0509 0.476 CD8_CTL L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 5.91e-01 -0.0386 0.0719 0.476 CD8_CTL L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 6.00e-01 0.0376 0.0716 0.476 CD8_CTL L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 1.56e-05 0.255 0.0577 0.476 CD8_Naive L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 6.14e-01 0.0212 0.0421 0.476 CD8_Naive L2
ENSG00000112357 PEX7 357015 sc-eQTL 6.50e-01 0.0396 0.0873 0.476 CD8_Naive L2
ENSG00000112378 PERP -927840 sc-eQTL 5.74e-02 0.126 0.0658 0.476 CD8_Naive L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 7.32e-01 0.0162 0.0471 0.476 CD8_Naive L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 6.77e-02 -0.102 0.0554 0.476 CD8_Naive L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 7.43e-01 0.0229 0.0697 0.476 CD8_Naive L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 1.11e-01 0.129 0.0804 0.477 CD8_TCM L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 7.48e-01 -0.0195 0.0608 0.477 CD8_TCM L2
ENSG00000112357 PEX7 357015 sc-eQTL 7.01e-01 0.0358 0.0929 0.477 CD8_TCM L2
ENSG00000112378 PERP -927840 sc-eQTL 5.27e-01 -0.0576 0.0909 0.477 CD8_TCM L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 7.80e-01 -0.0123 0.0439 0.477 CD8_TCM L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 7.00e-01 -0.0302 0.0783 0.477 CD8_TCM L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 1.04e-01 0.13 0.0798 0.477 CD8_TCM L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 2.61e-01 0.0869 0.077 0.489 CD8_TEM L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 2.09e-01 -0.0915 0.0727 0.489 CD8_TEM L2
ENSG00000112357 PEX7 357015 sc-eQTL 9.96e-01 0.000454 0.089 0.489 CD8_TEM L2
ENSG00000112378 PERP -927840 sc-eQTL 3.08e-01 0.0943 0.0923 0.489 CD8_TEM L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 8.11e-01 -0.0136 0.057 0.489 CD8_TEM L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 3.67e-01 -0.0795 0.088 0.489 CD8_TEM L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 7.81e-01 0.0235 0.0846 0.489 CD8_TEM L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 2.46e-02 0.138 0.0608 0.474 MAIT L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 9.66e-01 0.00219 0.0511 0.474 MAIT L2
ENSG00000112357 PEX7 357015 sc-eQTL 7.98e-01 0.0214 0.0834 0.474 MAIT L2
ENSG00000112378 PERP -927840 sc-eQTL 1.52e-01 0.124 0.0866 0.474 MAIT L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 8.21e-01 -0.0094 0.0414 0.474 MAIT L2
ENSG00000146410 MTFR2 929244 sc-eQTL 2.40e-01 -0.081 0.0687 0.474 MAIT L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 5.10e-01 -0.0475 0.072 0.474 MAIT L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 5.36e-01 0.0474 0.0765 0.474 MAIT L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 3.83e-02 0.139 0.0666 0.473 NK_CD56bright L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 9.31e-01 -0.00431 0.0497 0.473 NK_CD56bright L2
ENSG00000112357 PEX7 357015 sc-eQTL 5.44e-02 -0.168 0.087 0.473 NK_CD56bright L2
ENSG00000112378 PERP -927840 sc-eQTL 4.68e-01 0.0571 0.0785 0.473 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 8.57e-01 0.00904 0.0501 0.473 NK_CD56bright L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 2.65e-01 -0.085 0.076 0.473 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 1.51e-02 -0.193 0.0788 0.473 NK_CD56bright L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 3.64e-03 0.15 0.0508 0.474 NK_CD56dim L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 3.24e-01 0.0334 0.0338 0.474 NK_CD56dim L2
ENSG00000112357 PEX7 357015 sc-eQTL 6.92e-01 0.0354 0.0893 0.474 NK_CD56dim L2
ENSG00000112378 PERP -927840 sc-eQTL 2.77e-01 -0.0682 0.0627 0.474 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 4.31e-01 -0.0385 0.0488 0.474 NK_CD56dim L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 3.97e-01 -0.0596 0.0702 0.474 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 9.94e-01 -0.000543 0.0732 0.474 NK_CD56dim L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 8.43e-04 0.225 0.0664 0.468 NK_HLA L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 4.98e-01 0.0393 0.0578 0.468 NK_HLA L2
ENSG00000112357 PEX7 357015 sc-eQTL 3.66e-01 -0.0786 0.0866 0.468 NK_HLA L2
ENSG00000112378 PERP -927840 sc-eQTL 3.29e-01 -0.0687 0.0703 0.468 NK_HLA L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 3.54e-01 0.0502 0.0541 0.468 NK_HLA L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 7.58e-02 -0.152 0.0854 0.468 NK_HLA L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 6.96e-01 -0.0341 0.0873 0.468 NK_HLA L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 1.12e-03 0.178 0.0537 0.474 NK_cytokine L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 6.56e-01 0.0184 0.0411 0.474 NK_cytokine L2
ENSG00000112357 PEX7 357015 sc-eQTL 1.50e-01 -0.124 0.0861 0.474 NK_cytokine L2
ENSG00000112378 PERP -927840 sc-eQTL 6.58e-01 -0.0291 0.0656 0.474 NK_cytokine L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 8.47e-01 -0.00948 0.0492 0.474 NK_cytokine L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 4.97e-01 -0.0459 0.0675 0.474 NK_cytokine L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 3.81e-01 -0.065 0.074 0.474 NK_cytokine L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 2.05e-01 0.143 0.112 0.47 PB L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 4.10e-01 0.0801 0.0969 0.47 PB L2
ENSG00000112357 PEX7 357015 sc-eQTL 8.73e-01 0.0186 0.116 0.47 PB L2
ENSG00000112378 PERP -927840 sc-eQTL 5.51e-01 0.0432 0.0721 0.47 PB L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 7.30e-01 -0.0302 0.0876 0.47 PB L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 7.06e-03 0.265 0.0965 0.47 PB L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 6.25e-01 0.0516 0.105 0.47 PB L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 8.82e-01 -0.0103 0.0695 0.476 Pro_T L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 8.38e-01 -0.0147 0.0721 0.476 Pro_T L2
ENSG00000112357 PEX7 357015 sc-eQTL 5.16e-01 -0.0549 0.0844 0.476 Pro_T L2
ENSG00000112378 PERP -927840 sc-eQTL 1.07e-01 -0.108 0.0667 0.476 Pro_T L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 8.81e-02 -0.0721 0.0421 0.476 Pro_T L2
ENSG00000146410 MTFR2 929244 sc-eQTL 4.00e-01 0.0494 0.0586 0.476 Pro_T L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 7.32e-01 0.0281 0.082 0.476 Pro_T L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 1.01e-01 0.135 0.0817 0.476 Pro_T L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 4.27e-03 0.225 0.0779 0.476 Treg L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 1.40e-01 -0.0756 0.0511 0.476 Treg L2
ENSG00000112357 PEX7 357015 sc-eQTL 6.98e-02 0.152 0.0833 0.476 Treg L2
ENSG00000112378 PERP -927840 sc-eQTL 1.42e-01 0.133 0.0903 0.476 Treg L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 9.14e-01 0.00547 0.0505 0.476 Treg L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 9.80e-01 -0.00135 0.0547 0.476 Treg L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 4.49e-01 -0.0584 0.0769 0.476 Treg L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 1.56e-01 0.1 0.0702 0.473 cDC L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 9.01e-01 -0.00889 0.0712 0.473 cDC L2
ENSG00000112357 PEX7 357015 sc-eQTL 6.40e-01 -0.0428 0.0913 0.473 cDC L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 4.18e-01 -0.0564 0.0695 0.473 cDC L2
ENSG00000135525 MAP7 628760 sc-eQTL 5.52e-01 0.0485 0.0813 0.473 cDC L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 6.71e-01 0.0305 0.0716 0.473 cDC L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 3.21e-01 0.0901 0.0904 0.473 cDC L2
ENSG00000286646 AL121933.2 395534 sc-eQTL 1.87e-02 -0.218 0.0919 0.473 cDC L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 2.08e-07 0.24 0.0448 0.476 cMono_IL1B L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 6.71e-01 -0.0218 0.0512 0.476 cMono_IL1B L2
ENSG00000112357 PEX7 357015 sc-eQTL 6.69e-03 0.231 0.0844 0.476 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 7.81e-01 0.0143 0.0514 0.476 cMono_IL1B L2
ENSG00000135525 MAP7 628760 sc-eQTL 4.96e-01 0.0503 0.0739 0.476 cMono_IL1B L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 7.47e-01 0.0173 0.0534 0.476 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 4.16e-01 -0.0446 0.0548 0.476 cMono_IL1B L2
ENSG00000286646 AL121933.2 395534 sc-eQTL 1.94e-01 -0.0892 0.0685 0.476 cMono_IL1B L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 4.55e-05 0.223 0.0535 0.476 cMono_S100A L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 2.61e-01 0.0643 0.057 0.476 cMono_S100A L2
ENSG00000112357 PEX7 357015 sc-eQTL 1.79e-01 0.12 0.0889 0.476 cMono_S100A L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 5.10e-01 0.0326 0.0494 0.476 cMono_S100A L2
ENSG00000135525 MAP7 628760 sc-eQTL 2.47e-01 0.0964 0.083 0.476 cMono_S100A L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 4.84e-01 -0.0471 0.0672 0.476 cMono_S100A L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 4.55e-01 0.0531 0.0709 0.476 cMono_S100A L2
ENSG00000286646 AL121933.2 395534 sc-eQTL 2.33e-01 -0.0826 0.0691 0.476 cMono_S100A L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 2.33e-01 0.0998 0.0832 0.467 gdT L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 3.89e-01 0.0635 0.0735 0.467 gdT L2
ENSG00000112357 PEX7 357015 sc-eQTL 8.86e-01 -0.0152 0.106 0.467 gdT L2
ENSG00000112378 PERP -927840 sc-eQTL 1.90e-01 0.121 0.092 0.467 gdT L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 3.16e-01 0.0516 0.0513 0.467 gdT L2
ENSG00000146410 MTFR2 929244 sc-eQTL 5.76e-02 0.153 0.0802 0.467 gdT L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 1.92e-01 -0.142 0.108 0.467 gdT L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 6.81e-01 -0.0384 0.0932 0.467 gdT L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 2.83e-02 0.127 0.0576 0.473 intMono L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 4.29e-01 -0.061 0.0769 0.473 intMono L2
ENSG00000112357 PEX7 357015 sc-eQTL 7.62e-01 0.0238 0.0786 0.473 intMono L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 6.72e-01 -0.0213 0.0503 0.473 intMono L2
ENSG00000135525 MAP7 628760 sc-eQTL 2.67e-02 -0.171 0.0764 0.473 intMono L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 8.72e-01 -0.0132 0.0819 0.473 intMono L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 6.65e-01 -0.0325 0.075 0.473 intMono L2
ENSG00000286646 AL121933.2 395534 sc-eQTL 7.09e-01 0.0323 0.0865 0.473 intMono L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 1.02e-06 0.33 0.0653 0.475 ncMono L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 2.36e-01 0.0638 0.0537 0.475 ncMono L2
ENSG00000112357 PEX7 357015 sc-eQTL 8.68e-01 0.0143 0.0859 0.475 ncMono L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 6.28e-01 0.0298 0.0614 0.475 ncMono L2
ENSG00000135525 MAP7 628760 sc-eQTL 3.18e-01 -0.0758 0.0757 0.475 ncMono L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 8.77e-01 -0.0124 0.0798 0.475 ncMono L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 9.49e-01 0.00494 0.0768 0.475 ncMono L2
ENSG00000286646 AL121933.2 395534 sc-eQTL 4.77e-01 -0.0576 0.0808 0.475 ncMono L2
ENSG00000027697 IFNGR1 -39870 sc-eQTL 4.68e-01 0.0578 0.0794 0.48 pDC L2
ENSG00000029363 BCLAF1 889728 sc-eQTL 1.19e-02 -0.149 0.0585 0.48 pDC L2
ENSG00000112357 PEX7 357015 sc-eQTL 4.96e-01 -0.0597 0.0874 0.48 pDC L2
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 3.91e-01 -0.0632 0.0736 0.48 pDC L2
ENSG00000135525 MAP7 628760 sc-eQTL 7.64e-01 -0.0183 0.0611 0.48 pDC L2
ENSG00000197442 MAP3K5 387102 sc-eQTL 9.43e-01 -0.00703 0.0979 0.48 pDC L2
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 9.11e-01 -0.00835 0.0748 0.48 pDC L2
ENSG00000286646 AL121933.2 395534 sc-eQTL 5.37e-01 0.0558 0.0901 0.48 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -39870 sc-eQTL 2.48e-02 0.155 0.0687 0.476 B_Memory LOneK1K
ENSG00000029363 BCLAF1 889728 sc-eQTL 3.58e-01 -0.0359 0.039 0.476 B_Memory LOneK1K
ENSG00000112357 PEX7 357015 sc-eQTL 4.24e-02 -0.162 0.0792 0.476 B_Memory LOneK1K
ENSG00000112378 PERP -927840 sc-eQTL 6.97e-01 -0.0289 0.0743 0.476 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 7.27e-01 0.0171 0.049 0.476 B_Memory LOneK1K
ENSG00000197442 MAP3K5 387102 sc-eQTL 1.18e-01 -0.101 0.0646 0.476 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 4.89e-01 -0.0574 0.0829 0.476 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -39870 sc-eQTL 1.22e-02 0.179 0.0706 0.476 B_Naive LOneK1K
ENSG00000029363 BCLAF1 889728 sc-eQTL 6.81e-01 -0.0135 0.0329 0.476 B_Naive LOneK1K
ENSG00000112357 PEX7 357015 sc-eQTL 8.26e-01 0.0192 0.0873 0.476 B_Naive LOneK1K
ENSG00000112378 PERP -927840 sc-eQTL 7.66e-01 0.0233 0.0781 0.476 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 7.46e-01 -0.0133 0.041 0.476 B_Naive LOneK1K
ENSG00000197442 MAP3K5 387102 sc-eQTL 4.65e-01 -0.0439 0.0601 0.476 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 3.22e-01 -0.0725 0.0729 0.476 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -39870 sc-eQTL 3.28e-08 0.256 0.0446 0.476 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 889728 sc-eQTL 7.93e-01 -0.0118 0.0447 0.476 CD14_Mono LOneK1K
ENSG00000112357 PEX7 357015 sc-eQTL 7.65e-03 0.228 0.0847 0.476 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 8.75e-01 0.007 0.0444 0.476 CD14_Mono LOneK1K
ENSG00000135525 MAP7 628760 sc-eQTL 1.43e-01 0.113 0.0766 0.476 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 387102 sc-eQTL 8.81e-01 0.00782 0.052 0.476 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 8.91e-01 -0.00728 0.0532 0.476 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 395534 sc-eQTL 9.92e-02 -0.102 0.0615 0.476 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -39870 sc-eQTL 2.36e-06 0.262 0.0539 0.474 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 889728 sc-eQTL 6.06e-01 0.0265 0.0513 0.474 CD16_Mono LOneK1K
ENSG00000112357 PEX7 357015 sc-eQTL 9.86e-01 -0.00152 0.0858 0.474 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 7.53e-01 -0.0167 0.0531 0.474 CD16_Mono LOneK1K
ENSG00000135525 MAP7 628760 sc-eQTL 3.14e-02 -0.178 0.082 0.474 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 387102 sc-eQTL 9.97e-01 -0.000286 0.0681 0.474 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 6.98e-01 -0.0277 0.0712 0.474 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 395534 sc-eQTL 7.94e-01 -0.0211 0.0808 0.474 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -39870 sc-eQTL 9.26e-04 0.174 0.0518 0.474 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 889728 sc-eQTL 5.99e-01 0.0162 0.0309 0.474 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 357015 sc-eQTL 4.39e-01 -0.0695 0.0896 0.474 NK_CD56dim LOneK1K
ENSG00000112378 PERP -927840 sc-eQTL 1.23e-01 -0.0858 0.0553 0.474 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -687635 sc-eQTL 9.87e-01 -0.000814 0.0485 0.474 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 387102 sc-eQTL 2.58e-01 -0.0741 0.0653 0.474 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -688654 sc-eQTL 7.30e-01 -0.0234 0.0678 0.474 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -39870 pQTL 5.87e-10 0.0979 0.0157 0.0 0.0 0.461
ENSG00000027697 IFNGR1 -39870 eQTL 1.4200000000000002e-32 0.157 0.0127 0.0 0.0 0.451
ENSG00000135525 MAP7 628760 eQTL 0.0374 -0.0497 0.0239 0.0 0.0 0.451

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -39870 1.2e-05 1.3e-05 2.16e-06 7.18e-06 2.35e-06 5.6e-06 1.31e-05 2.15e-06 1.24e-05 5.73e-06 1.6e-05 6.5e-06 2.09e-05 4.65e-06 3.46e-06 7.01e-06 6.37e-06 9.82e-06 3.49e-06 3.05e-06 6.26e-06 1.1e-05 1.07e-05 3.3e-06 2.16e-05 4.46e-06 6.66e-06 4.97e-06 1.33e-05 1.22e-05 8.17e-06 1.03e-06 1.25e-06 3.3e-06 5.33e-06 2.79e-06 1.84e-06 1.91e-06 2.14e-06 1.11e-06 1.03e-06 1.73e-05 1.57e-06 2.62e-07 7.78e-07 1.83e-06 1.75e-06 6.92e-07 4.73e-07
ENSG00000182747 \N 257278 1.29e-06 9.01e-07 1.23e-07 3.77e-07 9.77e-08 3.32e-07 8.7e-07 2.03e-07 9.89e-07 3.05e-07 1.19e-06 5.55e-07 1.48e-06 2.5e-07 4.39e-07 3.96e-07 7.22e-07 5.05e-07 3.77e-07 3.31e-07 2.39e-07 5.76e-07 6.11e-07 3.09e-07 1.85e-06 2.57e-07 4.97e-07 4.59e-07 7e-07 9.93e-07 5.1e-07 4.34e-08 1.21e-07 2.08e-07 3.35e-07 2.76e-07 2.36e-07 1.26e-07 8.24e-08 1.86e-08 9.77e-08 1.36e-06 5.09e-08 4.18e-08 1.48e-07 2.64e-08 1.3e-07 3.84e-08 6.04e-08