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Genes within 1Mb (chr6:137174570:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -44879 sc-eQTL 1.52e-01 0.1 0.0696 0.63 B L1
ENSG00000029363 BCLAF1 884719 sc-eQTL 1.49e-01 -0.0449 0.031 0.63 B L1
ENSG00000112357 PEX7 352006 sc-eQTL 8.94e-01 0.0111 0.0827 0.63 B L1
ENSG00000112378 PERP -932849 sc-eQTL 5.28e-01 -0.0346 0.0547 0.63 B L1
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 3.18e-01 -0.044 0.044 0.63 B L1
ENSG00000197442 MAP3K5 382093 sc-eQTL 5.63e-01 -0.0356 0.0614 0.63 B L1
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 1.36e-01 -0.103 0.069 0.63 B L1
ENSG00000027697 IFNGR1 -44879 sc-eQTL 6.61e-04 0.158 0.0456 0.63 CD4T L1
ENSG00000029363 BCLAF1 884719 sc-eQTL 2.39e-02 -0.0797 0.035 0.63 CD4T L1
ENSG00000112357 PEX7 352006 sc-eQTL 1.48e-02 0.183 0.0744 0.63 CD4T L1
ENSG00000112378 PERP -932849 sc-eQTL 6.51e-02 0.0932 0.0502 0.63 CD4T L1
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 5.31e-01 -0.0298 0.0474 0.63 CD4T L1
ENSG00000197442 MAP3K5 382093 sc-eQTL 1.78e-01 -0.0487 0.036 0.63 CD4T L1
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 4.06e-02 -0.122 0.0591 0.63 CD4T L1
ENSG00000027697 IFNGR1 -44879 sc-eQTL 1.10e-02 0.134 0.0522 0.63 CD8T L1
ENSG00000029363 BCLAF1 884719 sc-eQTL 7.35e-01 -0.0122 0.0358 0.63 CD8T L1
ENSG00000112357 PEX7 352006 sc-eQTL 7.74e-01 0.0254 0.0883 0.63 CD8T L1
ENSG00000112378 PERP -932849 sc-eQTL 2.91e-01 -0.0609 0.0576 0.63 CD8T L1
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 7.45e-01 -0.0145 0.0446 0.63 CD8T L1
ENSG00000197442 MAP3K5 382093 sc-eQTL 2.74e-01 -0.0515 0.047 0.63 CD8T L1
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 9.35e-01 -0.00536 0.0655 0.63 CD8T L1
ENSG00000027697 IFNGR1 -44879 sc-eQTL 1.65e-01 0.0893 0.0641 0.628 DC L1
ENSG00000029363 BCLAF1 884719 sc-eQTL 5.21e-01 -0.0372 0.0579 0.628 DC L1
ENSG00000112357 PEX7 352006 sc-eQTL 1.93e-02 -0.211 0.0895 0.628 DC L1
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 8.64e-01 -0.0118 0.0689 0.628 DC L1
ENSG00000135525 MAP7 623751 sc-eQTL 7.50e-01 0.0238 0.0746 0.628 DC L1
ENSG00000197442 MAP3K5 382093 sc-eQTL 3.74e-01 0.0635 0.0713 0.628 DC L1
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 5.73e-01 0.0396 0.0701 0.628 DC L1
ENSG00000286646 AL121933.2 390525 sc-eQTL 8.52e-02 -0.16 0.0926 0.628 DC L1
ENSG00000027697 IFNGR1 -44879 sc-eQTL 5.49e-05 0.211 0.0513 0.63 Mono L1
ENSG00000029363 BCLAF1 884719 sc-eQTL 8.34e-01 0.00956 0.0455 0.63 Mono L1
ENSG00000112357 PEX7 352006 sc-eQTL 8.75e-02 0.153 0.089 0.63 Mono L1
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 9.07e-01 -0.00528 0.0452 0.63 Mono L1
ENSG00000135525 MAP7 623751 sc-eQTL 7.55e-01 0.0247 0.0791 0.63 Mono L1
ENSG00000197442 MAP3K5 382093 sc-eQTL 6.22e-01 -0.0261 0.0527 0.63 Mono L1
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 7.29e-01 0.0194 0.056 0.63 Mono L1
ENSG00000286646 AL121933.2 390525 sc-eQTL 8.06e-01 -0.0157 0.0639 0.63 Mono L1
ENSG00000027697 IFNGR1 -44879 sc-eQTL 1.94e-02 0.138 0.0587 0.631 NK L1
ENSG00000029363 BCLAF1 884719 sc-eQTL 6.48e-01 0.0144 0.0315 0.631 NK L1
ENSG00000112357 PEX7 352006 sc-eQTL 1.01e-01 -0.15 0.0911 0.631 NK L1
ENSG00000112378 PERP -932849 sc-eQTL 2.77e-01 -0.0628 0.0576 0.631 NK L1
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 3.44e-01 -0.0468 0.0494 0.631 NK L1
ENSG00000197442 MAP3K5 382093 sc-eQTL 4.49e-02 -0.142 0.0702 0.631 NK L1
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 2.39e-01 -0.0825 0.0699 0.631 NK L1
ENSG00000027697 IFNGR1 -44879 sc-eQTL 5.46e-01 0.0339 0.056 0.63 Other_T L1
ENSG00000029363 BCLAF1 884719 sc-eQTL 8.27e-01 -0.0103 0.047 0.63 Other_T L1
ENSG00000112357 PEX7 352006 sc-eQTL 7.56e-01 -0.0284 0.0913 0.63 Other_T L1
ENSG00000112378 PERP -932849 sc-eQTL 1.53e-01 0.105 0.073 0.63 Other_T L1
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 7.15e-01 -0.0127 0.0349 0.63 Other_T L1
ENSG00000146410 MTFR2 924235 sc-eQTL 9.41e-01 0.00392 0.0528 0.63 Other_T L1
ENSG00000197442 MAP3K5 382093 sc-eQTL 1.64e-01 -0.0937 0.067 0.63 Other_T L1
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 7.59e-01 0.0213 0.0692 0.63 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -44879 sc-eQTL 3.21e-01 0.0935 0.094 0.64 B_Activated L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 7.86e-01 -0.0208 0.0765 0.64 B_Activated L2
ENSG00000112357 PEX7 352006 sc-eQTL 2.62e-01 0.104 0.0924 0.64 B_Activated L2
ENSG00000112378 PERP -932849 sc-eQTL 7.04e-01 -0.0183 0.048 0.64 B_Activated L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 5.55e-01 -0.0549 0.093 0.64 B_Activated L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 1.54e-01 -0.148 0.104 0.64 B_Activated L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 2.22e-02 -0.185 0.0801 0.64 B_Activated L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 2.78e-01 0.0899 0.0827 0.633 B_Intermediate L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 1.38e-01 -0.0699 0.0469 0.633 B_Intermediate L2
ENSG00000112357 PEX7 352006 sc-eQTL 3.67e-01 -0.0782 0.0866 0.633 B_Intermediate L2
ENSG00000112378 PERP -932849 sc-eQTL 7.52e-01 0.025 0.0791 0.633 B_Intermediate L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 8.94e-01 -0.00828 0.062 0.633 B_Intermediate L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 8.91e-02 -0.127 0.0745 0.633 B_Intermediate L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 1.69e-01 -0.121 0.0876 0.633 B_Intermediate L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 3.51e-01 0.0853 0.0913 0.629 B_Memory L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 4.60e-01 -0.0402 0.0542 0.629 B_Memory L2
ENSG00000112357 PEX7 352006 sc-eQTL 2.32e-01 -0.11 0.0921 0.629 B_Memory L2
ENSG00000112378 PERP -932849 sc-eQTL 9.76e-01 -0.00264 0.0869 0.629 B_Memory L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 6.09e-01 -0.0306 0.0598 0.629 B_Memory L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 8.76e-01 -0.0128 0.0817 0.629 B_Memory L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 9.92e-01 -0.000844 0.089 0.629 B_Memory L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 2.34e-01 0.0841 0.0704 0.63 B_Naive1 L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 4.14e-01 -0.033 0.0403 0.63 B_Naive1 L2
ENSG00000112357 PEX7 352006 sc-eQTL 9.85e-01 -0.00178 0.0932 0.63 B_Naive1 L2
ENSG00000112378 PERP -932849 sc-eQTL 4.20e-01 0.0658 0.0814 0.63 B_Naive1 L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 6.24e-01 -0.0232 0.0473 0.63 B_Naive1 L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 6.94e-01 0.0262 0.0664 0.63 B_Naive1 L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 2.65e-01 -0.0825 0.0739 0.63 B_Naive1 L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 3.19e-01 -0.0859 0.0861 0.631 B_Naive2 L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 4.63e-01 -0.0368 0.05 0.631 B_Naive2 L2
ENSG00000112357 PEX7 352006 sc-eQTL 7.58e-01 0.0291 0.0944 0.631 B_Naive2 L2
ENSG00000112378 PERP -932849 sc-eQTL 2.96e-01 -0.0719 0.0686 0.631 B_Naive2 L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 7.34e-01 -0.0233 0.0687 0.631 B_Naive2 L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 2.13e-01 -0.0909 0.0729 0.631 B_Naive2 L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 4.27e-01 -0.0706 0.0887 0.631 B_Naive2 L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 4.36e-01 0.0632 0.081 0.634 CD4_CTL L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 2.90e-01 -0.0761 0.0717 0.634 CD4_CTL L2
ENSG00000112357 PEX7 352006 sc-eQTL 4.26e-01 0.0716 0.0898 0.634 CD4_CTL L2
ENSG00000112378 PERP -932849 sc-eQTL 5.33e-01 0.0568 0.0911 0.634 CD4_CTL L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 2.10e-01 -0.0666 0.053 0.634 CD4_CTL L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 1.88e-01 -0.112 0.0845 0.634 CD4_CTL L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 8.83e-01 0.0122 0.0827 0.634 CD4_CTL L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 5.14e-02 0.086 0.0439 0.63 CD4_Naive L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 8.31e-02 -0.0615 0.0353 0.63 CD4_Naive L2
ENSG00000112357 PEX7 352006 sc-eQTL 1.80e-02 0.197 0.0825 0.63 CD4_Naive L2
ENSG00000112378 PERP -932849 sc-eQTL 8.24e-02 0.12 0.0685 0.63 CD4_Naive L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 8.47e-01 -0.00933 0.0484 0.63 CD4_Naive L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 1.50e-01 -0.0511 0.0354 0.63 CD4_Naive L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 2.33e-02 -0.142 0.062 0.63 CD4_Naive L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 2.94e-02 0.137 0.0624 0.63 CD4_TCM L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 9.04e-02 -0.0673 0.0395 0.63 CD4_TCM L2
ENSG00000112357 PEX7 352006 sc-eQTL 3.43e-01 0.0878 0.0924 0.63 CD4_TCM L2
ENSG00000112378 PERP -932849 sc-eQTL 3.27e-01 0.0767 0.0781 0.63 CD4_TCM L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 3.35e-01 -0.0438 0.0453 0.63 CD4_TCM L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 9.72e-01 -0.00181 0.0518 0.63 CD4_TCM L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 9.76e-01 -0.00194 0.0637 0.63 CD4_TCM L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 1.63e-02 0.169 0.0697 0.63 CD4_TEM L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 1.10e-01 -0.08 0.0498 0.63 CD4_TEM L2
ENSG00000112357 PEX7 352006 sc-eQTL 3.59e-01 0.0837 0.0911 0.63 CD4_TEM L2
ENSG00000112378 PERP -932849 sc-eQTL 3.78e-01 0.0652 0.0738 0.63 CD4_TEM L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 6.41e-01 -0.0219 0.0469 0.63 CD4_TEM L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 1.63e-01 -0.101 0.0722 0.63 CD4_TEM L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 9.83e-01 -0.00157 0.0753 0.63 CD4_TEM L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 3.45e-02 0.132 0.0622 0.63 CD8_CTL L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 1.43e-01 -0.0613 0.0417 0.63 CD8_CTL L2
ENSG00000112357 PEX7 352006 sc-eQTL 6.72e-01 -0.0366 0.0865 0.63 CD8_CTL L2
ENSG00000112378 PERP -932849 sc-eQTL 6.67e-02 -0.152 0.0825 0.63 CD8_CTL L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 2.59e-01 -0.0598 0.0528 0.63 CD8_CTL L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 3.44e-01 -0.0706 0.0745 0.63 CD8_CTL L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 7.32e-01 0.0255 0.0744 0.63 CD8_CTL L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 9.39e-03 0.164 0.0625 0.63 CD8_Naive L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 6.13e-01 0.0224 0.0443 0.63 CD8_Naive L2
ENSG00000112357 PEX7 352006 sc-eQTL 3.14e-01 0.0927 0.0918 0.63 CD8_Naive L2
ENSG00000112378 PERP -932849 sc-eQTL 1.74e-01 0.0951 0.0696 0.63 CD8_Naive L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 9.15e-01 0.00533 0.0497 0.63 CD8_Naive L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 2.00e-02 -0.136 0.0581 0.63 CD8_Naive L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 5.75e-01 -0.0412 0.0734 0.63 CD8_Naive L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 1.74e-01 0.115 0.0843 0.637 CD8_TCM L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 6.04e-01 -0.033 0.0635 0.637 CD8_TCM L2
ENSG00000112357 PEX7 352006 sc-eQTL 9.26e-01 0.00907 0.0972 0.637 CD8_TCM L2
ENSG00000112378 PERP -932849 sc-eQTL 6.08e-01 -0.0489 0.0952 0.637 CD8_TCM L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 1.83e-01 -0.0611 0.0457 0.637 CD8_TCM L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 5.32e-01 -0.0512 0.0819 0.637 CD8_TCM L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 4.10e-02 0.171 0.0831 0.637 CD8_TCM L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 5.06e-01 0.0529 0.0795 0.639 CD8_TEM L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 3.43e-01 -0.0713 0.0749 0.639 CD8_TEM L2
ENSG00000112357 PEX7 352006 sc-eQTL 7.92e-01 0.0241 0.0916 0.639 CD8_TEM L2
ENSG00000112378 PERP -932849 sc-eQTL 7.31e-02 0.17 0.0944 0.639 CD8_TEM L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 8.57e-01 -0.0106 0.0587 0.639 CD8_TEM L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 1.22e-01 -0.14 0.0902 0.639 CD8_TEM L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 7.06e-01 -0.0328 0.087 0.639 CD8_TEM L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 3.05e-01 0.0664 0.0645 0.63 MAIT L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 3.46e-01 -0.0507 0.0536 0.63 MAIT L2
ENSG00000112357 PEX7 352006 sc-eQTL 5.08e-01 -0.0581 0.0876 0.63 MAIT L2
ENSG00000112378 PERP -932849 sc-eQTL 2.27e-02 0.207 0.0903 0.63 MAIT L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 3.74e-01 -0.0387 0.0434 0.63 MAIT L2
ENSG00000146410 MTFR2 924235 sc-eQTL 1.77e-01 -0.0978 0.0722 0.63 MAIT L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 1.93e-01 -0.0987 0.0755 0.63 MAIT L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 9.55e-01 -0.00454 0.0805 0.63 MAIT L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 1.84e-01 0.0924 0.0693 0.624 NK_CD56bright L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 3.01e-01 -0.0531 0.0512 0.624 NK_CD56bright L2
ENSG00000112357 PEX7 352006 sc-eQTL 1.13e-01 -0.144 0.0902 0.624 NK_CD56bright L2
ENSG00000112378 PERP -932849 sc-eQTL 2.66e-01 0.0904 0.081 0.624 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 5.94e-01 -0.0276 0.0518 0.624 NK_CD56bright L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 3.59e-02 -0.165 0.078 0.624 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 4.90e-03 -0.231 0.081 0.624 NK_CD56bright L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 2.39e-02 0.123 0.0541 0.629 NK_CD56dim L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 2.40e-01 0.042 0.0357 0.629 NK_CD56dim L2
ENSG00000112357 PEX7 352006 sc-eQTL 6.51e-01 -0.0428 0.0943 0.629 NK_CD56dim L2
ENSG00000112378 PERP -932849 sc-eQTL 7.36e-01 0.0224 0.0663 0.629 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 3.29e-01 -0.0504 0.0514 0.629 NK_CD56dim L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 7.51e-02 -0.132 0.0737 0.629 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 9.18e-01 0.00799 0.0772 0.629 NK_CD56dim L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 4.36e-02 0.142 0.07 0.616 NK_HLA L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 4.35e-01 0.0468 0.0598 0.616 NK_HLA L2
ENSG00000112357 PEX7 352006 sc-eQTL 3.71e-01 -0.0804 0.0897 0.616 NK_HLA L2
ENSG00000112378 PERP -932849 sc-eQTL 7.88e-02 -0.128 0.0723 0.616 NK_HLA L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 8.77e-01 0.0087 0.0561 0.616 NK_HLA L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 7.89e-02 -0.156 0.0884 0.616 NK_HLA L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 1.88e-01 -0.119 0.09 0.616 NK_HLA L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 9.68e-03 0.148 0.0567 0.629 NK_cytokine L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 9.83e-01 0.000923 0.043 0.629 NK_cytokine L2
ENSG00000112357 PEX7 352006 sc-eQTL 7.25e-01 -0.0319 0.0904 0.629 NK_cytokine L2
ENSG00000112378 PERP -932849 sc-eQTL 4.69e-01 -0.0497 0.0685 0.629 NK_cytokine L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 3.44e-01 -0.0487 0.0513 0.629 NK_cytokine L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 1.48e-01 -0.102 0.0703 0.629 NK_cytokine L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 1.61e-01 -0.109 0.0772 0.629 NK_cytokine L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 3.42e-01 0.108 0.113 0.615 PB L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 8.87e-01 -0.014 0.0983 0.615 PB L2
ENSG00000112357 PEX7 352006 sc-eQTL 6.64e-01 0.051 0.117 0.615 PB L2
ENSG00000112378 PERP -932849 sc-eQTL 9.11e-01 -0.00822 0.073 0.615 PB L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 1.00e+00 -2.45e-05 0.0886 0.615 PB L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 5.08e-02 0.196 0.0991 0.615 PB L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 7.05e-02 0.191 0.105 0.615 PB L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 9.63e-01 -0.00336 0.0718 0.63 Pro_T L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 8.52e-01 -0.0139 0.0744 0.63 Pro_T L2
ENSG00000112357 PEX7 352006 sc-eQTL 6.20e-01 0.0433 0.0871 0.63 Pro_T L2
ENSG00000112378 PERP -932849 sc-eQTL 9.12e-01 -0.00763 0.0693 0.63 Pro_T L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 2.06e-01 -0.0552 0.0436 0.63 Pro_T L2
ENSG00000146410 MTFR2 924235 sc-eQTL 4.53e-01 0.0455 0.0605 0.63 Pro_T L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 2.65e-01 -0.0944 0.0844 0.63 Pro_T L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 1.53e-01 0.121 0.0844 0.63 Pro_T L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 6.25e-02 0.156 0.0833 0.63 Treg L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 3.55e-02 -0.114 0.0537 0.63 Treg L2
ENSG00000112357 PEX7 352006 sc-eQTL 1.42e-01 0.13 0.0882 0.63 Treg L2
ENSG00000112378 PERP -932849 sc-eQTL 1.39e-01 0.142 0.0954 0.63 Treg L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 7.40e-01 -0.0177 0.0533 0.63 Treg L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 4.04e-01 0.0483 0.0577 0.63 Treg L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 2.06e-01 -0.103 0.0811 0.63 Treg L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 4.58e-01 0.0534 0.0719 0.627 cDC L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 3.07e-01 0.0741 0.0723 0.627 cDC L2
ENSG00000112357 PEX7 352006 sc-eQTL 1.37e-01 -0.138 0.0926 0.627 cDC L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 4.04e-01 -0.0593 0.0708 0.627 cDC L2
ENSG00000135525 MAP7 623751 sc-eQTL 4.54e-01 0.0622 0.0828 0.627 cDC L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 2.27e-01 0.0881 0.0727 0.627 cDC L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 1.15e-01 0.145 0.0918 0.627 cDC L2
ENSG00000286646 AL121933.2 390525 sc-eQTL 2.82e-02 -0.208 0.0938 0.627 cDC L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 1.62e-04 0.185 0.0481 0.63 cMono_IL1B L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 8.76e-01 0.00835 0.0533 0.63 cMono_IL1B L2
ENSG00000112357 PEX7 352006 sc-eQTL 2.69e-02 0.197 0.0884 0.63 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 9.62e-01 0.00253 0.0535 0.63 cMono_IL1B L2
ENSG00000135525 MAP7 623751 sc-eQTL 8.18e-01 -0.0178 0.077 0.63 cMono_IL1B L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 5.83e-01 0.0305 0.0556 0.63 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 8.02e-01 -0.0144 0.0571 0.63 cMono_IL1B L2
ENSG00000286646 AL121933.2 390525 sc-eQTL 9.54e-01 -0.00418 0.0715 0.63 cMono_IL1B L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 1.02e-02 0.147 0.0567 0.63 cMono_S100A L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 9.22e-02 0.0994 0.0588 0.63 cMono_S100A L2
ENSG00000112357 PEX7 352006 sc-eQTL 2.60e-01 0.104 0.0921 0.63 cMono_S100A L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 5.67e-01 0.0293 0.0511 0.63 cMono_S100A L2
ENSG00000135525 MAP7 623751 sc-eQTL 1.94e-01 0.112 0.0858 0.63 cMono_S100A L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 3.36e-01 -0.0669 0.0694 0.63 cMono_S100A L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 9.50e-01 -0.00458 0.0735 0.63 cMono_S100A L2
ENSG00000286646 AL121933.2 390525 sc-eQTL 6.13e-01 -0.0363 0.0717 0.63 cMono_S100A L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 1.54e-01 0.123 0.086 0.621 gdT L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 9.69e-01 -0.00301 0.0763 0.621 gdT L2
ENSG00000112357 PEX7 352006 sc-eQTL 9.00e-01 -0.0139 0.11 0.621 gdT L2
ENSG00000112378 PERP -932849 sc-eQTL 6.35e-02 0.177 0.0947 0.621 gdT L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 4.65e-01 0.039 0.0532 0.621 gdT L2
ENSG00000146410 MTFR2 924235 sc-eQTL 1.69e-02 0.199 0.0824 0.621 gdT L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 4.76e-01 -0.0804 0.113 0.621 gdT L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 6.52e-01 -0.0435 0.0965 0.621 gdT L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 7.04e-02 0.11 0.0607 0.629 intMono L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 7.27e-01 0.0282 0.0808 0.629 intMono L2
ENSG00000112357 PEX7 352006 sc-eQTL 9.42e-01 -0.00596 0.0825 0.629 intMono L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 5.99e-01 0.0278 0.0528 0.629 intMono L2
ENSG00000135525 MAP7 623751 sc-eQTL 2.37e-01 -0.096 0.0809 0.629 intMono L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 3.85e-01 -0.0747 0.0858 0.629 intMono L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 7.20e-01 0.0283 0.0787 0.629 intMono L2
ENSG00000286646 AL121933.2 390525 sc-eQTL 7.11e-01 0.0337 0.0908 0.629 intMono L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 6.49e-04 0.24 0.0694 0.631 ncMono L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 4.88e-01 0.0385 0.0554 0.631 ncMono L2
ENSG00000112357 PEX7 352006 sc-eQTL 8.34e-01 -0.0185 0.0885 0.631 ncMono L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 4.43e-01 0.0486 0.0631 0.631 ncMono L2
ENSG00000135525 MAP7 623751 sc-eQTL 6.40e-01 -0.0366 0.0781 0.631 ncMono L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 2.81e-01 -0.0886 0.0819 0.631 ncMono L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 9.14e-01 -0.00852 0.0791 0.631 ncMono L2
ENSG00000286646 AL121933.2 390525 sc-eQTL 2.32e-01 -0.0996 0.0831 0.631 ncMono L2
ENSG00000027697 IFNGR1 -44879 sc-eQTL 6.77e-01 0.0352 0.0841 0.638 pDC L2
ENSG00000029363 BCLAF1 884719 sc-eQTL 6.70e-02 -0.115 0.0625 0.638 pDC L2
ENSG00000112357 PEX7 352006 sc-eQTL 9.50e-02 -0.154 0.0918 0.638 pDC L2
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 3.12e-01 -0.0789 0.0778 0.638 pDC L2
ENSG00000135525 MAP7 623751 sc-eQTL 6.72e-02 -0.118 0.064 0.638 pDC L2
ENSG00000197442 MAP3K5 382093 sc-eQTL 7.98e-01 0.0265 0.104 0.638 pDC L2
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 6.01e-01 -0.0415 0.0792 0.638 pDC L2
ENSG00000286646 AL121933.2 390525 sc-eQTL 9.65e-01 0.00422 0.0955 0.638 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -44879 sc-eQTL 5.74e-02 0.139 0.0725 0.63 B_Memory LOneK1K
ENSG00000029363 BCLAF1 884719 sc-eQTL 3.03e-01 -0.0423 0.041 0.63 B_Memory LOneK1K
ENSG00000112357 PEX7 352006 sc-eQTL 1.65e-01 -0.117 0.0837 0.63 B_Memory LOneK1K
ENSG00000112378 PERP -932849 sc-eQTL 9.21e-01 -0.00775 0.0782 0.63 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 8.46e-01 0.01 0.0516 0.63 B_Memory LOneK1K
ENSG00000197442 MAP3K5 382093 sc-eQTL 5.48e-02 -0.131 0.0677 0.63 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 1.96e-01 -0.113 0.0869 0.63 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -44879 sc-eQTL 6.73e-01 0.0315 0.0746 0.63 B_Naive LOneK1K
ENSG00000029363 BCLAF1 884719 sc-eQTL 2.96e-01 -0.0358 0.0342 0.63 B_Naive LOneK1K
ENSG00000112357 PEX7 352006 sc-eQTL 6.64e-01 0.0394 0.0908 0.63 B_Naive LOneK1K
ENSG00000112378 PERP -932849 sc-eQTL 5.52e-01 0.0484 0.0812 0.63 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 8.96e-01 -0.00562 0.0427 0.63 B_Naive LOneK1K
ENSG00000197442 MAP3K5 382093 sc-eQTL 8.73e-01 -0.01 0.0626 0.63 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 7.39e-02 -0.136 0.0755 0.63 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -44879 sc-eQTL 1.21e-04 0.189 0.0483 0.63 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 884719 sc-eQTL 5.19e-01 0.0301 0.0466 0.63 CD14_Mono LOneK1K
ENSG00000112357 PEX7 352006 sc-eQTL 4.23e-02 0.182 0.089 0.63 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 8.55e-01 0.00848 0.0463 0.63 CD14_Mono LOneK1K
ENSG00000135525 MAP7 623751 sc-eQTL 3.71e-01 0.0719 0.0802 0.63 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 382093 sc-eQTL 9.47e-01 -0.00361 0.0543 0.63 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 9.19e-01 0.00564 0.0555 0.63 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 390525 sc-eQTL 5.44e-01 -0.0393 0.0645 0.63 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -44879 sc-eQTL 2.73e-04 0.213 0.0575 0.629 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 884719 sc-eQTL 3.35e-01 0.0517 0.0535 0.629 CD16_Mono LOneK1K
ENSG00000112357 PEX7 352006 sc-eQTL 8.88e-01 -0.0126 0.0896 0.629 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 9.42e-01 0.00407 0.0555 0.629 CD16_Mono LOneK1K
ENSG00000135525 MAP7 623751 sc-eQTL 1.60e-01 -0.121 0.0862 0.629 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 382093 sc-eQTL 2.76e-01 -0.0774 0.0709 0.629 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 8.98e-01 -0.00952 0.0743 0.629 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 390525 sc-eQTL 6.96e-01 -0.033 0.0844 0.629 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -44879 sc-eQTL 2.76e-02 0.123 0.0554 0.629 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 884719 sc-eQTL 4.83e-01 0.0228 0.0325 0.629 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 352006 sc-eQTL 3.46e-01 -0.0892 0.0944 0.629 NK_CD56dim LOneK1K
ENSG00000112378 PERP -932849 sc-eQTL 1.26e-01 -0.0896 0.0584 0.629 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -692644 sc-eQTL 3.51e-01 -0.0476 0.051 0.629 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 382093 sc-eQTL 6.18e-02 -0.129 0.0685 0.629 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -693663 sc-eQTL 3.19e-01 -0.0712 0.0713 0.629 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -44879 pQTL 0.000133 0.0613 0.016 0.0 0.0 0.405
ENSG00000027697 IFNGR1 -44879 eQTL 1.49e-20 0.124 0.013 0.0 0.0 0.416

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -44879 1.25e-05 1.24e-05 1.74e-06 6.2e-06 2.25e-06 5.49e-06 1.14e-05 2.08e-06 8.98e-06 5.04e-06 1.27e-05 5.85e-06 1.6e-05 3.86e-06 3.21e-06 6.54e-06 5.55e-06 8.1e-06 2.61e-06 2.83e-06 5.11e-06 9.86e-06 8.83e-06 3.07e-06 1.54e-05 3.98e-06 4.86e-06 3.74e-06 1.04e-05 9.23e-06 5.9e-06 9.59e-07 1.21e-06 2.92e-06 4.55e-06 2.56e-06 1.64e-06 1.98e-06 2.23e-06 1e-06 8.13e-07 1.31e-05 1.84e-06 1.69e-07 7.38e-07 1.67e-06 1.4e-06 7.66e-07 6.14e-07