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Genes within 1Mb (chr6:137173485:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -45964 sc-eQTL 1.52e-01 0.1 0.0696 0.63 B L1
ENSG00000029363 BCLAF1 883634 sc-eQTL 1.49e-01 -0.0449 0.031 0.63 B L1
ENSG00000112357 PEX7 350921 sc-eQTL 8.94e-01 0.0111 0.0827 0.63 B L1
ENSG00000112378 PERP -933934 sc-eQTL 5.28e-01 -0.0346 0.0547 0.63 B L1
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 3.18e-01 -0.044 0.044 0.63 B L1
ENSG00000197442 MAP3K5 381008 sc-eQTL 5.63e-01 -0.0356 0.0614 0.63 B L1
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 1.36e-01 -0.103 0.069 0.63 B L1
ENSG00000027697 IFNGR1 -45964 sc-eQTL 6.61e-04 0.158 0.0456 0.63 CD4T L1
ENSG00000029363 BCLAF1 883634 sc-eQTL 2.39e-02 -0.0797 0.035 0.63 CD4T L1
ENSG00000112357 PEX7 350921 sc-eQTL 1.48e-02 0.183 0.0744 0.63 CD4T L1
ENSG00000112378 PERP -933934 sc-eQTL 6.51e-02 0.0932 0.0502 0.63 CD4T L1
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 5.31e-01 -0.0298 0.0474 0.63 CD4T L1
ENSG00000197442 MAP3K5 381008 sc-eQTL 1.78e-01 -0.0487 0.036 0.63 CD4T L1
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 4.06e-02 -0.122 0.0591 0.63 CD4T L1
ENSG00000027697 IFNGR1 -45964 sc-eQTL 1.10e-02 0.134 0.0522 0.63 CD8T L1
ENSG00000029363 BCLAF1 883634 sc-eQTL 7.35e-01 -0.0122 0.0358 0.63 CD8T L1
ENSG00000112357 PEX7 350921 sc-eQTL 7.74e-01 0.0254 0.0883 0.63 CD8T L1
ENSG00000112378 PERP -933934 sc-eQTL 2.91e-01 -0.0609 0.0576 0.63 CD8T L1
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 7.45e-01 -0.0145 0.0446 0.63 CD8T L1
ENSG00000197442 MAP3K5 381008 sc-eQTL 2.74e-01 -0.0515 0.047 0.63 CD8T L1
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 9.35e-01 -0.00536 0.0655 0.63 CD8T L1
ENSG00000027697 IFNGR1 -45964 sc-eQTL 1.65e-01 0.0893 0.0641 0.628 DC L1
ENSG00000029363 BCLAF1 883634 sc-eQTL 5.21e-01 -0.0372 0.0579 0.628 DC L1
ENSG00000112357 PEX7 350921 sc-eQTL 1.93e-02 -0.211 0.0895 0.628 DC L1
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 8.64e-01 -0.0118 0.0689 0.628 DC L1
ENSG00000135525 MAP7 622666 sc-eQTL 7.50e-01 0.0238 0.0746 0.628 DC L1
ENSG00000197442 MAP3K5 381008 sc-eQTL 3.74e-01 0.0635 0.0713 0.628 DC L1
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 5.73e-01 0.0396 0.0701 0.628 DC L1
ENSG00000286646 AL121933.2 389440 sc-eQTL 8.52e-02 -0.16 0.0926 0.628 DC L1
ENSG00000027697 IFNGR1 -45964 sc-eQTL 5.49e-05 0.211 0.0513 0.63 Mono L1
ENSG00000029363 BCLAF1 883634 sc-eQTL 8.34e-01 0.00956 0.0455 0.63 Mono L1
ENSG00000112357 PEX7 350921 sc-eQTL 8.75e-02 0.153 0.089 0.63 Mono L1
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 9.07e-01 -0.00528 0.0452 0.63 Mono L1
ENSG00000135525 MAP7 622666 sc-eQTL 7.55e-01 0.0247 0.0791 0.63 Mono L1
ENSG00000197442 MAP3K5 381008 sc-eQTL 6.22e-01 -0.0261 0.0527 0.63 Mono L1
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 7.29e-01 0.0194 0.056 0.63 Mono L1
ENSG00000286646 AL121933.2 389440 sc-eQTL 8.06e-01 -0.0157 0.0639 0.63 Mono L1
ENSG00000027697 IFNGR1 -45964 sc-eQTL 1.94e-02 0.138 0.0587 0.631 NK L1
ENSG00000029363 BCLAF1 883634 sc-eQTL 6.48e-01 0.0144 0.0315 0.631 NK L1
ENSG00000112357 PEX7 350921 sc-eQTL 1.01e-01 -0.15 0.0911 0.631 NK L1
ENSG00000112378 PERP -933934 sc-eQTL 2.77e-01 -0.0628 0.0576 0.631 NK L1
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 3.44e-01 -0.0468 0.0494 0.631 NK L1
ENSG00000197442 MAP3K5 381008 sc-eQTL 4.49e-02 -0.142 0.0702 0.631 NK L1
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 2.39e-01 -0.0825 0.0699 0.631 NK L1
ENSG00000027697 IFNGR1 -45964 sc-eQTL 5.46e-01 0.0339 0.056 0.63 Other_T L1
ENSG00000029363 BCLAF1 883634 sc-eQTL 8.27e-01 -0.0103 0.047 0.63 Other_T L1
ENSG00000112357 PEX7 350921 sc-eQTL 7.56e-01 -0.0284 0.0913 0.63 Other_T L1
ENSG00000112378 PERP -933934 sc-eQTL 1.53e-01 0.105 0.073 0.63 Other_T L1
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 7.15e-01 -0.0127 0.0349 0.63 Other_T L1
ENSG00000146410 MTFR2 923150 sc-eQTL 9.41e-01 0.00392 0.0528 0.63 Other_T L1
ENSG00000197442 MAP3K5 381008 sc-eQTL 1.64e-01 -0.0937 0.067 0.63 Other_T L1
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 7.59e-01 0.0213 0.0692 0.63 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -45964 sc-eQTL 3.21e-01 0.0935 0.094 0.64 B_Activated L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 7.86e-01 -0.0208 0.0765 0.64 B_Activated L2
ENSG00000112357 PEX7 350921 sc-eQTL 2.62e-01 0.104 0.0924 0.64 B_Activated L2
ENSG00000112378 PERP -933934 sc-eQTL 7.04e-01 -0.0183 0.048 0.64 B_Activated L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 5.55e-01 -0.0549 0.093 0.64 B_Activated L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 1.54e-01 -0.148 0.104 0.64 B_Activated L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 2.22e-02 -0.185 0.0801 0.64 B_Activated L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 2.78e-01 0.0899 0.0827 0.633 B_Intermediate L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 1.38e-01 -0.0699 0.0469 0.633 B_Intermediate L2
ENSG00000112357 PEX7 350921 sc-eQTL 3.67e-01 -0.0782 0.0866 0.633 B_Intermediate L2
ENSG00000112378 PERP -933934 sc-eQTL 7.52e-01 0.025 0.0791 0.633 B_Intermediate L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 8.94e-01 -0.00828 0.062 0.633 B_Intermediate L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 8.91e-02 -0.127 0.0745 0.633 B_Intermediate L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 1.69e-01 -0.121 0.0876 0.633 B_Intermediate L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 3.51e-01 0.0853 0.0913 0.629 B_Memory L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 4.60e-01 -0.0402 0.0542 0.629 B_Memory L2
ENSG00000112357 PEX7 350921 sc-eQTL 2.32e-01 -0.11 0.0921 0.629 B_Memory L2
ENSG00000112378 PERP -933934 sc-eQTL 9.76e-01 -0.00264 0.0869 0.629 B_Memory L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 6.09e-01 -0.0306 0.0598 0.629 B_Memory L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 8.76e-01 -0.0128 0.0817 0.629 B_Memory L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 9.92e-01 -0.000844 0.089 0.629 B_Memory L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 2.34e-01 0.0841 0.0704 0.63 B_Naive1 L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 4.14e-01 -0.033 0.0403 0.63 B_Naive1 L2
ENSG00000112357 PEX7 350921 sc-eQTL 9.85e-01 -0.00178 0.0932 0.63 B_Naive1 L2
ENSG00000112378 PERP -933934 sc-eQTL 4.20e-01 0.0658 0.0814 0.63 B_Naive1 L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 6.24e-01 -0.0232 0.0473 0.63 B_Naive1 L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 6.94e-01 0.0262 0.0664 0.63 B_Naive1 L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 2.65e-01 -0.0825 0.0739 0.63 B_Naive1 L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 3.19e-01 -0.0859 0.0861 0.631 B_Naive2 L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 4.63e-01 -0.0368 0.05 0.631 B_Naive2 L2
ENSG00000112357 PEX7 350921 sc-eQTL 7.58e-01 0.0291 0.0944 0.631 B_Naive2 L2
ENSG00000112378 PERP -933934 sc-eQTL 2.96e-01 -0.0719 0.0686 0.631 B_Naive2 L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 7.34e-01 -0.0233 0.0687 0.631 B_Naive2 L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 2.13e-01 -0.0909 0.0729 0.631 B_Naive2 L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 4.27e-01 -0.0706 0.0887 0.631 B_Naive2 L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 4.36e-01 0.0632 0.081 0.634 CD4_CTL L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 2.90e-01 -0.0761 0.0717 0.634 CD4_CTL L2
ENSG00000112357 PEX7 350921 sc-eQTL 4.26e-01 0.0716 0.0898 0.634 CD4_CTL L2
ENSG00000112378 PERP -933934 sc-eQTL 5.33e-01 0.0568 0.0911 0.634 CD4_CTL L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 2.10e-01 -0.0666 0.053 0.634 CD4_CTL L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 1.88e-01 -0.112 0.0845 0.634 CD4_CTL L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 8.83e-01 0.0122 0.0827 0.634 CD4_CTL L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 5.14e-02 0.086 0.0439 0.63 CD4_Naive L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 8.31e-02 -0.0615 0.0353 0.63 CD4_Naive L2
ENSG00000112357 PEX7 350921 sc-eQTL 1.80e-02 0.197 0.0825 0.63 CD4_Naive L2
ENSG00000112378 PERP -933934 sc-eQTL 8.24e-02 0.12 0.0685 0.63 CD4_Naive L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 8.47e-01 -0.00933 0.0484 0.63 CD4_Naive L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 1.50e-01 -0.0511 0.0354 0.63 CD4_Naive L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 2.33e-02 -0.142 0.062 0.63 CD4_Naive L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 2.94e-02 0.137 0.0624 0.63 CD4_TCM L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 9.04e-02 -0.0673 0.0395 0.63 CD4_TCM L2
ENSG00000112357 PEX7 350921 sc-eQTL 3.43e-01 0.0878 0.0924 0.63 CD4_TCM L2
ENSG00000112378 PERP -933934 sc-eQTL 3.27e-01 0.0767 0.0781 0.63 CD4_TCM L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 3.35e-01 -0.0438 0.0453 0.63 CD4_TCM L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 9.72e-01 -0.00181 0.0518 0.63 CD4_TCM L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 9.76e-01 -0.00194 0.0637 0.63 CD4_TCM L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 1.63e-02 0.169 0.0697 0.63 CD4_TEM L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 1.10e-01 -0.08 0.0498 0.63 CD4_TEM L2
ENSG00000112357 PEX7 350921 sc-eQTL 3.59e-01 0.0837 0.0911 0.63 CD4_TEM L2
ENSG00000112378 PERP -933934 sc-eQTL 3.78e-01 0.0652 0.0738 0.63 CD4_TEM L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 6.41e-01 -0.0219 0.0469 0.63 CD4_TEM L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 1.63e-01 -0.101 0.0722 0.63 CD4_TEM L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 9.83e-01 -0.00157 0.0753 0.63 CD4_TEM L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 3.45e-02 0.132 0.0622 0.63 CD8_CTL L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 1.43e-01 -0.0613 0.0417 0.63 CD8_CTL L2
ENSG00000112357 PEX7 350921 sc-eQTL 6.72e-01 -0.0366 0.0865 0.63 CD8_CTL L2
ENSG00000112378 PERP -933934 sc-eQTL 6.67e-02 -0.152 0.0825 0.63 CD8_CTL L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 2.59e-01 -0.0598 0.0528 0.63 CD8_CTL L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 3.44e-01 -0.0706 0.0745 0.63 CD8_CTL L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 7.32e-01 0.0255 0.0744 0.63 CD8_CTL L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 9.39e-03 0.164 0.0625 0.63 CD8_Naive L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 6.13e-01 0.0224 0.0443 0.63 CD8_Naive L2
ENSG00000112357 PEX7 350921 sc-eQTL 3.14e-01 0.0927 0.0918 0.63 CD8_Naive L2
ENSG00000112378 PERP -933934 sc-eQTL 1.74e-01 0.0951 0.0696 0.63 CD8_Naive L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 9.15e-01 0.00533 0.0497 0.63 CD8_Naive L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 2.00e-02 -0.136 0.0581 0.63 CD8_Naive L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 5.75e-01 -0.0412 0.0734 0.63 CD8_Naive L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 1.74e-01 0.115 0.0843 0.637 CD8_TCM L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 6.04e-01 -0.033 0.0635 0.637 CD8_TCM L2
ENSG00000112357 PEX7 350921 sc-eQTL 9.26e-01 0.00907 0.0972 0.637 CD8_TCM L2
ENSG00000112378 PERP -933934 sc-eQTL 6.08e-01 -0.0489 0.0952 0.637 CD8_TCM L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 1.83e-01 -0.0611 0.0457 0.637 CD8_TCM L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 5.32e-01 -0.0512 0.0819 0.637 CD8_TCM L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 4.10e-02 0.171 0.0831 0.637 CD8_TCM L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 5.06e-01 0.0529 0.0795 0.639 CD8_TEM L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 3.43e-01 -0.0713 0.0749 0.639 CD8_TEM L2
ENSG00000112357 PEX7 350921 sc-eQTL 7.92e-01 0.0241 0.0916 0.639 CD8_TEM L2
ENSG00000112378 PERP -933934 sc-eQTL 7.31e-02 0.17 0.0944 0.639 CD8_TEM L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 8.57e-01 -0.0106 0.0587 0.639 CD8_TEM L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 1.22e-01 -0.14 0.0902 0.639 CD8_TEM L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 7.06e-01 -0.0328 0.087 0.639 CD8_TEM L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 3.05e-01 0.0664 0.0645 0.63 MAIT L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 3.46e-01 -0.0507 0.0536 0.63 MAIT L2
ENSG00000112357 PEX7 350921 sc-eQTL 5.08e-01 -0.0581 0.0876 0.63 MAIT L2
ENSG00000112378 PERP -933934 sc-eQTL 2.27e-02 0.207 0.0903 0.63 MAIT L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 3.74e-01 -0.0387 0.0434 0.63 MAIT L2
ENSG00000146410 MTFR2 923150 sc-eQTL 1.77e-01 -0.0978 0.0722 0.63 MAIT L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 1.93e-01 -0.0987 0.0755 0.63 MAIT L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 9.55e-01 -0.00454 0.0805 0.63 MAIT L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 1.84e-01 0.0924 0.0693 0.624 NK_CD56bright L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 3.01e-01 -0.0531 0.0512 0.624 NK_CD56bright L2
ENSG00000112357 PEX7 350921 sc-eQTL 1.13e-01 -0.144 0.0902 0.624 NK_CD56bright L2
ENSG00000112378 PERP -933934 sc-eQTL 2.66e-01 0.0904 0.081 0.624 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 5.94e-01 -0.0276 0.0518 0.624 NK_CD56bright L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 3.59e-02 -0.165 0.078 0.624 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 4.90e-03 -0.231 0.081 0.624 NK_CD56bright L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 2.39e-02 0.123 0.0541 0.629 NK_CD56dim L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 2.40e-01 0.042 0.0357 0.629 NK_CD56dim L2
ENSG00000112357 PEX7 350921 sc-eQTL 6.51e-01 -0.0428 0.0943 0.629 NK_CD56dim L2
ENSG00000112378 PERP -933934 sc-eQTL 7.36e-01 0.0224 0.0663 0.629 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 3.29e-01 -0.0504 0.0514 0.629 NK_CD56dim L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 7.51e-02 -0.132 0.0737 0.629 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 9.18e-01 0.00799 0.0772 0.629 NK_CD56dim L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 4.36e-02 0.142 0.07 0.616 NK_HLA L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 4.35e-01 0.0468 0.0598 0.616 NK_HLA L2
ENSG00000112357 PEX7 350921 sc-eQTL 3.71e-01 -0.0804 0.0897 0.616 NK_HLA L2
ENSG00000112378 PERP -933934 sc-eQTL 7.88e-02 -0.128 0.0723 0.616 NK_HLA L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 8.77e-01 0.0087 0.0561 0.616 NK_HLA L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 7.89e-02 -0.156 0.0884 0.616 NK_HLA L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 1.88e-01 -0.119 0.09 0.616 NK_HLA L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 9.68e-03 0.148 0.0567 0.629 NK_cytokine L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 9.83e-01 0.000923 0.043 0.629 NK_cytokine L2
ENSG00000112357 PEX7 350921 sc-eQTL 7.25e-01 -0.0319 0.0904 0.629 NK_cytokine L2
ENSG00000112378 PERP -933934 sc-eQTL 4.69e-01 -0.0497 0.0685 0.629 NK_cytokine L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 3.44e-01 -0.0487 0.0513 0.629 NK_cytokine L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 1.48e-01 -0.102 0.0703 0.629 NK_cytokine L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 1.61e-01 -0.109 0.0772 0.629 NK_cytokine L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 3.42e-01 0.108 0.113 0.615 PB L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 8.87e-01 -0.014 0.0983 0.615 PB L2
ENSG00000112357 PEX7 350921 sc-eQTL 6.64e-01 0.051 0.117 0.615 PB L2
ENSG00000112378 PERP -933934 sc-eQTL 9.11e-01 -0.00822 0.073 0.615 PB L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 1.00e+00 -2.45e-05 0.0886 0.615 PB L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 5.08e-02 0.196 0.0991 0.615 PB L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 7.05e-02 0.191 0.105 0.615 PB L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 9.63e-01 -0.00336 0.0718 0.63 Pro_T L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 8.52e-01 -0.0139 0.0744 0.63 Pro_T L2
ENSG00000112357 PEX7 350921 sc-eQTL 6.20e-01 0.0433 0.0871 0.63 Pro_T L2
ENSG00000112378 PERP -933934 sc-eQTL 9.12e-01 -0.00763 0.0693 0.63 Pro_T L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 2.06e-01 -0.0552 0.0436 0.63 Pro_T L2
ENSG00000146410 MTFR2 923150 sc-eQTL 4.53e-01 0.0455 0.0605 0.63 Pro_T L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 2.65e-01 -0.0944 0.0844 0.63 Pro_T L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 1.53e-01 0.121 0.0844 0.63 Pro_T L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 6.25e-02 0.156 0.0833 0.63 Treg L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 3.55e-02 -0.114 0.0537 0.63 Treg L2
ENSG00000112357 PEX7 350921 sc-eQTL 1.42e-01 0.13 0.0882 0.63 Treg L2
ENSG00000112378 PERP -933934 sc-eQTL 1.39e-01 0.142 0.0954 0.63 Treg L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 7.40e-01 -0.0177 0.0533 0.63 Treg L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 4.04e-01 0.0483 0.0577 0.63 Treg L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 2.06e-01 -0.103 0.0811 0.63 Treg L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 4.58e-01 0.0534 0.0719 0.627 cDC L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 3.07e-01 0.0741 0.0723 0.627 cDC L2
ENSG00000112357 PEX7 350921 sc-eQTL 1.37e-01 -0.138 0.0926 0.627 cDC L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 4.04e-01 -0.0593 0.0708 0.627 cDC L2
ENSG00000135525 MAP7 622666 sc-eQTL 4.54e-01 0.0622 0.0828 0.627 cDC L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 2.27e-01 0.0881 0.0727 0.627 cDC L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 1.15e-01 0.145 0.0918 0.627 cDC L2
ENSG00000286646 AL121933.2 389440 sc-eQTL 2.82e-02 -0.208 0.0938 0.627 cDC L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 1.62e-04 0.185 0.0481 0.63 cMono_IL1B L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 8.76e-01 0.00835 0.0533 0.63 cMono_IL1B L2
ENSG00000112357 PEX7 350921 sc-eQTL 2.69e-02 0.197 0.0884 0.63 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 9.62e-01 0.00253 0.0535 0.63 cMono_IL1B L2
ENSG00000135525 MAP7 622666 sc-eQTL 8.18e-01 -0.0178 0.077 0.63 cMono_IL1B L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 5.83e-01 0.0305 0.0556 0.63 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 8.02e-01 -0.0144 0.0571 0.63 cMono_IL1B L2
ENSG00000286646 AL121933.2 389440 sc-eQTL 9.54e-01 -0.00418 0.0715 0.63 cMono_IL1B L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 1.02e-02 0.147 0.0567 0.63 cMono_S100A L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 9.22e-02 0.0994 0.0588 0.63 cMono_S100A L2
ENSG00000112357 PEX7 350921 sc-eQTL 2.60e-01 0.104 0.0921 0.63 cMono_S100A L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 5.67e-01 0.0293 0.0511 0.63 cMono_S100A L2
ENSG00000135525 MAP7 622666 sc-eQTL 1.94e-01 0.112 0.0858 0.63 cMono_S100A L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 3.36e-01 -0.0669 0.0694 0.63 cMono_S100A L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 9.50e-01 -0.00458 0.0735 0.63 cMono_S100A L2
ENSG00000286646 AL121933.2 389440 sc-eQTL 6.13e-01 -0.0363 0.0717 0.63 cMono_S100A L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 1.54e-01 0.123 0.086 0.621 gdT L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 9.69e-01 -0.00301 0.0763 0.621 gdT L2
ENSG00000112357 PEX7 350921 sc-eQTL 9.00e-01 -0.0139 0.11 0.621 gdT L2
ENSG00000112378 PERP -933934 sc-eQTL 6.35e-02 0.177 0.0947 0.621 gdT L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 4.65e-01 0.039 0.0532 0.621 gdT L2
ENSG00000146410 MTFR2 923150 sc-eQTL 1.69e-02 0.199 0.0824 0.621 gdT L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 4.76e-01 -0.0804 0.113 0.621 gdT L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 6.52e-01 -0.0435 0.0965 0.621 gdT L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 7.04e-02 0.11 0.0607 0.629 intMono L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 7.27e-01 0.0282 0.0808 0.629 intMono L2
ENSG00000112357 PEX7 350921 sc-eQTL 9.42e-01 -0.00596 0.0825 0.629 intMono L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 5.99e-01 0.0278 0.0528 0.629 intMono L2
ENSG00000135525 MAP7 622666 sc-eQTL 2.37e-01 -0.096 0.0809 0.629 intMono L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 3.85e-01 -0.0747 0.0858 0.629 intMono L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 7.20e-01 0.0283 0.0787 0.629 intMono L2
ENSG00000286646 AL121933.2 389440 sc-eQTL 7.11e-01 0.0337 0.0908 0.629 intMono L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 6.49e-04 0.24 0.0694 0.631 ncMono L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 4.88e-01 0.0385 0.0554 0.631 ncMono L2
ENSG00000112357 PEX7 350921 sc-eQTL 8.34e-01 -0.0185 0.0885 0.631 ncMono L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 4.43e-01 0.0486 0.0631 0.631 ncMono L2
ENSG00000135525 MAP7 622666 sc-eQTL 6.40e-01 -0.0366 0.0781 0.631 ncMono L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 2.81e-01 -0.0886 0.0819 0.631 ncMono L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 9.14e-01 -0.00852 0.0791 0.631 ncMono L2
ENSG00000286646 AL121933.2 389440 sc-eQTL 2.32e-01 -0.0996 0.0831 0.631 ncMono L2
ENSG00000027697 IFNGR1 -45964 sc-eQTL 6.77e-01 0.0352 0.0841 0.638 pDC L2
ENSG00000029363 BCLAF1 883634 sc-eQTL 6.70e-02 -0.115 0.0625 0.638 pDC L2
ENSG00000112357 PEX7 350921 sc-eQTL 9.50e-02 -0.154 0.0918 0.638 pDC L2
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 3.12e-01 -0.0789 0.0778 0.638 pDC L2
ENSG00000135525 MAP7 622666 sc-eQTL 6.72e-02 -0.118 0.064 0.638 pDC L2
ENSG00000197442 MAP3K5 381008 sc-eQTL 7.98e-01 0.0265 0.104 0.638 pDC L2
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 6.01e-01 -0.0415 0.0792 0.638 pDC L2
ENSG00000286646 AL121933.2 389440 sc-eQTL 9.65e-01 0.00422 0.0955 0.638 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -45964 sc-eQTL 5.74e-02 0.139 0.0725 0.63 B_Memory LOneK1K
ENSG00000029363 BCLAF1 883634 sc-eQTL 3.03e-01 -0.0423 0.041 0.63 B_Memory LOneK1K
ENSG00000112357 PEX7 350921 sc-eQTL 1.65e-01 -0.117 0.0837 0.63 B_Memory LOneK1K
ENSG00000112378 PERP -933934 sc-eQTL 9.21e-01 -0.00775 0.0782 0.63 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 8.46e-01 0.01 0.0516 0.63 B_Memory LOneK1K
ENSG00000197442 MAP3K5 381008 sc-eQTL 5.48e-02 -0.131 0.0677 0.63 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 1.96e-01 -0.113 0.0869 0.63 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -45964 sc-eQTL 6.73e-01 0.0315 0.0746 0.63 B_Naive LOneK1K
ENSG00000029363 BCLAF1 883634 sc-eQTL 2.96e-01 -0.0358 0.0342 0.63 B_Naive LOneK1K
ENSG00000112357 PEX7 350921 sc-eQTL 6.64e-01 0.0394 0.0908 0.63 B_Naive LOneK1K
ENSG00000112378 PERP -933934 sc-eQTL 5.52e-01 0.0484 0.0812 0.63 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 8.96e-01 -0.00562 0.0427 0.63 B_Naive LOneK1K
ENSG00000197442 MAP3K5 381008 sc-eQTL 8.73e-01 -0.01 0.0626 0.63 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 7.39e-02 -0.136 0.0755 0.63 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -45964 sc-eQTL 1.21e-04 0.189 0.0483 0.63 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 883634 sc-eQTL 5.19e-01 0.0301 0.0466 0.63 CD14_Mono LOneK1K
ENSG00000112357 PEX7 350921 sc-eQTL 4.23e-02 0.182 0.089 0.63 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 8.55e-01 0.00848 0.0463 0.63 CD14_Mono LOneK1K
ENSG00000135525 MAP7 622666 sc-eQTL 3.71e-01 0.0719 0.0802 0.63 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 381008 sc-eQTL 9.47e-01 -0.00361 0.0543 0.63 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 9.19e-01 0.00564 0.0555 0.63 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 389440 sc-eQTL 5.44e-01 -0.0393 0.0645 0.63 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -45964 sc-eQTL 2.73e-04 0.213 0.0575 0.629 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 883634 sc-eQTL 3.35e-01 0.0517 0.0535 0.629 CD16_Mono LOneK1K
ENSG00000112357 PEX7 350921 sc-eQTL 8.88e-01 -0.0126 0.0896 0.629 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 9.42e-01 0.00407 0.0555 0.629 CD16_Mono LOneK1K
ENSG00000135525 MAP7 622666 sc-eQTL 1.60e-01 -0.121 0.0862 0.629 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 381008 sc-eQTL 2.76e-01 -0.0774 0.0709 0.629 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 8.98e-01 -0.00952 0.0743 0.629 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 389440 sc-eQTL 6.96e-01 -0.033 0.0844 0.629 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -45964 sc-eQTL 2.76e-02 0.123 0.0554 0.629 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 883634 sc-eQTL 4.83e-01 0.0228 0.0325 0.629 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 350921 sc-eQTL 3.46e-01 -0.0892 0.0944 0.629 NK_CD56dim LOneK1K
ENSG00000112378 PERP -933934 sc-eQTL 1.26e-01 -0.0896 0.0584 0.629 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -693729 sc-eQTL 3.51e-01 -0.0476 0.051 0.629 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 381008 sc-eQTL 6.18e-02 -0.129 0.0685 0.629 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -694748 sc-eQTL 3.19e-01 -0.0712 0.0713 0.629 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -45964 pQTL 0.000133 0.0613 0.016 0.0 0.0 0.405
ENSG00000027697 IFNGR1 -45964 eQTL 1.5e-20 0.124 0.013 0.0 0.0 0.416

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -45964 9.25e-06 1.23e-05 1.28e-06 6.11e-06 2.22e-06 4.19e-06 1.09e-05 1.85e-06 9.72e-06 5.06e-06 1.25e-05 5.47e-06 1.69e-05 3.63e-06 2.54e-06 6.06e-06 4.92e-06 7.14e-06 2.72e-06 2.79e-06 4.67e-06 9.17e-06 7.38e-06 3.07e-06 1.5e-05 3.12e-06 4.47e-06 3.38e-06 9.77e-06 8.01e-06 6.59e-06 7.36e-07 1.05e-06 2.77e-06 4.46e-06 2.31e-06 1.55e-06 1.74e-06 1.59e-06 1.01e-06 6.93e-07 1.29e-05 1.42e-06 1.65e-07 7.55e-07 1.51e-06 9.03e-07 6.21e-07 5.83e-07