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Genes within 1Mb (chr6:137168489:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -50960 sc-eQTL 1.52e-01 0.1 0.0696 0.63 B L1
ENSG00000029363 BCLAF1 878638 sc-eQTL 1.49e-01 -0.0449 0.031 0.63 B L1
ENSG00000112357 PEX7 345925 sc-eQTL 8.94e-01 0.0111 0.0827 0.63 B L1
ENSG00000112378 PERP -938930 sc-eQTL 5.28e-01 -0.0346 0.0547 0.63 B L1
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 3.18e-01 -0.044 0.044 0.63 B L1
ENSG00000197442 MAP3K5 376012 sc-eQTL 5.63e-01 -0.0356 0.0614 0.63 B L1
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 1.36e-01 -0.103 0.069 0.63 B L1
ENSG00000027697 IFNGR1 -50960 sc-eQTL 6.61e-04 0.158 0.0456 0.63 CD4T L1
ENSG00000029363 BCLAF1 878638 sc-eQTL 2.39e-02 -0.0797 0.035 0.63 CD4T L1
ENSG00000112357 PEX7 345925 sc-eQTL 1.48e-02 0.183 0.0744 0.63 CD4T L1
ENSG00000112378 PERP -938930 sc-eQTL 6.51e-02 0.0932 0.0502 0.63 CD4T L1
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 5.31e-01 -0.0298 0.0474 0.63 CD4T L1
ENSG00000197442 MAP3K5 376012 sc-eQTL 1.78e-01 -0.0487 0.036 0.63 CD4T L1
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 4.06e-02 -0.122 0.0591 0.63 CD4T L1
ENSG00000027697 IFNGR1 -50960 sc-eQTL 1.10e-02 0.134 0.0522 0.63 CD8T L1
ENSG00000029363 BCLAF1 878638 sc-eQTL 7.35e-01 -0.0122 0.0358 0.63 CD8T L1
ENSG00000112357 PEX7 345925 sc-eQTL 7.74e-01 0.0254 0.0883 0.63 CD8T L1
ENSG00000112378 PERP -938930 sc-eQTL 2.91e-01 -0.0609 0.0576 0.63 CD8T L1
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 7.45e-01 -0.0145 0.0446 0.63 CD8T L1
ENSG00000197442 MAP3K5 376012 sc-eQTL 2.74e-01 -0.0515 0.047 0.63 CD8T L1
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 9.35e-01 -0.00536 0.0655 0.63 CD8T L1
ENSG00000027697 IFNGR1 -50960 sc-eQTL 1.65e-01 0.0893 0.0641 0.628 DC L1
ENSG00000029363 BCLAF1 878638 sc-eQTL 5.21e-01 -0.0372 0.0579 0.628 DC L1
ENSG00000112357 PEX7 345925 sc-eQTL 1.93e-02 -0.211 0.0895 0.628 DC L1
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 8.64e-01 -0.0118 0.0689 0.628 DC L1
ENSG00000135525 MAP7 617670 sc-eQTL 7.50e-01 0.0238 0.0746 0.628 DC L1
ENSG00000197442 MAP3K5 376012 sc-eQTL 3.74e-01 0.0635 0.0713 0.628 DC L1
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 5.73e-01 0.0396 0.0701 0.628 DC L1
ENSG00000286646 AL121933.2 384444 sc-eQTL 8.52e-02 -0.16 0.0926 0.628 DC L1
ENSG00000027697 IFNGR1 -50960 sc-eQTL 5.49e-05 0.211 0.0513 0.63 Mono L1
ENSG00000029363 BCLAF1 878638 sc-eQTL 8.34e-01 0.00956 0.0455 0.63 Mono L1
ENSG00000112357 PEX7 345925 sc-eQTL 8.75e-02 0.153 0.089 0.63 Mono L1
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 9.07e-01 -0.00528 0.0452 0.63 Mono L1
ENSG00000135525 MAP7 617670 sc-eQTL 7.55e-01 0.0247 0.0791 0.63 Mono L1
ENSG00000197442 MAP3K5 376012 sc-eQTL 6.22e-01 -0.0261 0.0527 0.63 Mono L1
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 7.29e-01 0.0194 0.056 0.63 Mono L1
ENSG00000286646 AL121933.2 384444 sc-eQTL 8.06e-01 -0.0157 0.0639 0.63 Mono L1
ENSG00000027697 IFNGR1 -50960 sc-eQTL 1.94e-02 0.138 0.0587 0.631 NK L1
ENSG00000029363 BCLAF1 878638 sc-eQTL 6.48e-01 0.0144 0.0315 0.631 NK L1
ENSG00000112357 PEX7 345925 sc-eQTL 1.01e-01 -0.15 0.0911 0.631 NK L1
ENSG00000112378 PERP -938930 sc-eQTL 2.77e-01 -0.0628 0.0576 0.631 NK L1
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 3.44e-01 -0.0468 0.0494 0.631 NK L1
ENSG00000197442 MAP3K5 376012 sc-eQTL 4.49e-02 -0.142 0.0702 0.631 NK L1
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 2.39e-01 -0.0825 0.0699 0.631 NK L1
ENSG00000027697 IFNGR1 -50960 sc-eQTL 5.46e-01 0.0339 0.056 0.63 Other_T L1
ENSG00000029363 BCLAF1 878638 sc-eQTL 8.27e-01 -0.0103 0.047 0.63 Other_T L1
ENSG00000112357 PEX7 345925 sc-eQTL 7.56e-01 -0.0284 0.0913 0.63 Other_T L1
ENSG00000112378 PERP -938930 sc-eQTL 1.53e-01 0.105 0.073 0.63 Other_T L1
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 7.15e-01 -0.0127 0.0349 0.63 Other_T L1
ENSG00000146410 MTFR2 918154 sc-eQTL 9.41e-01 0.00392 0.0528 0.63 Other_T L1
ENSG00000197442 MAP3K5 376012 sc-eQTL 1.64e-01 -0.0937 0.067 0.63 Other_T L1
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 7.59e-01 0.0213 0.0692 0.63 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -50960 sc-eQTL 3.21e-01 0.0935 0.094 0.64 B_Activated L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 7.86e-01 -0.0208 0.0765 0.64 B_Activated L2
ENSG00000112357 PEX7 345925 sc-eQTL 2.62e-01 0.104 0.0924 0.64 B_Activated L2
ENSG00000112378 PERP -938930 sc-eQTL 7.04e-01 -0.0183 0.048 0.64 B_Activated L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 5.55e-01 -0.0549 0.093 0.64 B_Activated L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 1.54e-01 -0.148 0.104 0.64 B_Activated L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 2.22e-02 -0.185 0.0801 0.64 B_Activated L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 2.78e-01 0.0899 0.0827 0.633 B_Intermediate L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 1.38e-01 -0.0699 0.0469 0.633 B_Intermediate L2
ENSG00000112357 PEX7 345925 sc-eQTL 3.67e-01 -0.0782 0.0866 0.633 B_Intermediate L2
ENSG00000112378 PERP -938930 sc-eQTL 7.52e-01 0.025 0.0791 0.633 B_Intermediate L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 8.94e-01 -0.00828 0.062 0.633 B_Intermediate L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 8.91e-02 -0.127 0.0745 0.633 B_Intermediate L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 1.69e-01 -0.121 0.0876 0.633 B_Intermediate L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 3.51e-01 0.0853 0.0913 0.629 B_Memory L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 4.60e-01 -0.0402 0.0542 0.629 B_Memory L2
ENSG00000112357 PEX7 345925 sc-eQTL 2.32e-01 -0.11 0.0921 0.629 B_Memory L2
ENSG00000112378 PERP -938930 sc-eQTL 9.76e-01 -0.00264 0.0869 0.629 B_Memory L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 6.09e-01 -0.0306 0.0598 0.629 B_Memory L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 8.76e-01 -0.0128 0.0817 0.629 B_Memory L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 9.92e-01 -0.000844 0.089 0.629 B_Memory L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 2.34e-01 0.0841 0.0704 0.63 B_Naive1 L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 4.14e-01 -0.033 0.0403 0.63 B_Naive1 L2
ENSG00000112357 PEX7 345925 sc-eQTL 9.85e-01 -0.00178 0.0932 0.63 B_Naive1 L2
ENSG00000112378 PERP -938930 sc-eQTL 4.20e-01 0.0658 0.0814 0.63 B_Naive1 L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 6.24e-01 -0.0232 0.0473 0.63 B_Naive1 L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 6.94e-01 0.0262 0.0664 0.63 B_Naive1 L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 2.65e-01 -0.0825 0.0739 0.63 B_Naive1 L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 3.19e-01 -0.0859 0.0861 0.631 B_Naive2 L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 4.63e-01 -0.0368 0.05 0.631 B_Naive2 L2
ENSG00000112357 PEX7 345925 sc-eQTL 7.58e-01 0.0291 0.0944 0.631 B_Naive2 L2
ENSG00000112378 PERP -938930 sc-eQTL 2.96e-01 -0.0719 0.0686 0.631 B_Naive2 L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 7.34e-01 -0.0233 0.0687 0.631 B_Naive2 L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 2.13e-01 -0.0909 0.0729 0.631 B_Naive2 L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 4.27e-01 -0.0706 0.0887 0.631 B_Naive2 L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 4.36e-01 0.0632 0.081 0.634 CD4_CTL L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 2.90e-01 -0.0761 0.0717 0.634 CD4_CTL L2
ENSG00000112357 PEX7 345925 sc-eQTL 4.26e-01 0.0716 0.0898 0.634 CD4_CTL L2
ENSG00000112378 PERP -938930 sc-eQTL 5.33e-01 0.0568 0.0911 0.634 CD4_CTL L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 2.10e-01 -0.0666 0.053 0.634 CD4_CTL L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 1.88e-01 -0.112 0.0845 0.634 CD4_CTL L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 8.83e-01 0.0122 0.0827 0.634 CD4_CTL L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 5.14e-02 0.086 0.0439 0.63 CD4_Naive L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 8.31e-02 -0.0615 0.0353 0.63 CD4_Naive L2
ENSG00000112357 PEX7 345925 sc-eQTL 1.80e-02 0.197 0.0825 0.63 CD4_Naive L2
ENSG00000112378 PERP -938930 sc-eQTL 8.24e-02 0.12 0.0685 0.63 CD4_Naive L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 8.47e-01 -0.00933 0.0484 0.63 CD4_Naive L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 1.50e-01 -0.0511 0.0354 0.63 CD4_Naive L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 2.33e-02 -0.142 0.062 0.63 CD4_Naive L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 2.94e-02 0.137 0.0624 0.63 CD4_TCM L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 9.04e-02 -0.0673 0.0395 0.63 CD4_TCM L2
ENSG00000112357 PEX7 345925 sc-eQTL 3.43e-01 0.0878 0.0924 0.63 CD4_TCM L2
ENSG00000112378 PERP -938930 sc-eQTL 3.27e-01 0.0767 0.0781 0.63 CD4_TCM L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 3.35e-01 -0.0438 0.0453 0.63 CD4_TCM L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 9.72e-01 -0.00181 0.0518 0.63 CD4_TCM L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 9.76e-01 -0.00194 0.0637 0.63 CD4_TCM L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 1.63e-02 0.169 0.0697 0.63 CD4_TEM L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 1.10e-01 -0.08 0.0498 0.63 CD4_TEM L2
ENSG00000112357 PEX7 345925 sc-eQTL 3.59e-01 0.0837 0.0911 0.63 CD4_TEM L2
ENSG00000112378 PERP -938930 sc-eQTL 3.78e-01 0.0652 0.0738 0.63 CD4_TEM L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 6.41e-01 -0.0219 0.0469 0.63 CD4_TEM L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 1.63e-01 -0.101 0.0722 0.63 CD4_TEM L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 9.83e-01 -0.00157 0.0753 0.63 CD4_TEM L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 3.45e-02 0.132 0.0622 0.63 CD8_CTL L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 1.43e-01 -0.0613 0.0417 0.63 CD8_CTL L2
ENSG00000112357 PEX7 345925 sc-eQTL 6.72e-01 -0.0366 0.0865 0.63 CD8_CTL L2
ENSG00000112378 PERP -938930 sc-eQTL 6.67e-02 -0.152 0.0825 0.63 CD8_CTL L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 2.59e-01 -0.0598 0.0528 0.63 CD8_CTL L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 3.44e-01 -0.0706 0.0745 0.63 CD8_CTL L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 7.32e-01 0.0255 0.0744 0.63 CD8_CTL L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 9.39e-03 0.164 0.0625 0.63 CD8_Naive L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 6.13e-01 0.0224 0.0443 0.63 CD8_Naive L2
ENSG00000112357 PEX7 345925 sc-eQTL 3.14e-01 0.0927 0.0918 0.63 CD8_Naive L2
ENSG00000112378 PERP -938930 sc-eQTL 1.74e-01 0.0951 0.0696 0.63 CD8_Naive L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 9.15e-01 0.00533 0.0497 0.63 CD8_Naive L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 2.00e-02 -0.136 0.0581 0.63 CD8_Naive L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 5.75e-01 -0.0412 0.0734 0.63 CD8_Naive L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 1.74e-01 0.115 0.0843 0.637 CD8_TCM L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 6.04e-01 -0.033 0.0635 0.637 CD8_TCM L2
ENSG00000112357 PEX7 345925 sc-eQTL 9.26e-01 0.00907 0.0972 0.637 CD8_TCM L2
ENSG00000112378 PERP -938930 sc-eQTL 6.08e-01 -0.0489 0.0952 0.637 CD8_TCM L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 1.83e-01 -0.0611 0.0457 0.637 CD8_TCM L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 5.32e-01 -0.0512 0.0819 0.637 CD8_TCM L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 4.10e-02 0.171 0.0831 0.637 CD8_TCM L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 5.06e-01 0.0529 0.0795 0.639 CD8_TEM L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 3.43e-01 -0.0713 0.0749 0.639 CD8_TEM L2
ENSG00000112357 PEX7 345925 sc-eQTL 7.92e-01 0.0241 0.0916 0.639 CD8_TEM L2
ENSG00000112378 PERP -938930 sc-eQTL 7.31e-02 0.17 0.0944 0.639 CD8_TEM L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 8.57e-01 -0.0106 0.0587 0.639 CD8_TEM L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 1.22e-01 -0.14 0.0902 0.639 CD8_TEM L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 7.06e-01 -0.0328 0.087 0.639 CD8_TEM L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 3.05e-01 0.0664 0.0645 0.63 MAIT L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 3.46e-01 -0.0507 0.0536 0.63 MAIT L2
ENSG00000112357 PEX7 345925 sc-eQTL 5.08e-01 -0.0581 0.0876 0.63 MAIT L2
ENSG00000112378 PERP -938930 sc-eQTL 2.27e-02 0.207 0.0903 0.63 MAIT L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 3.74e-01 -0.0387 0.0434 0.63 MAIT L2
ENSG00000146410 MTFR2 918154 sc-eQTL 1.77e-01 -0.0978 0.0722 0.63 MAIT L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 1.93e-01 -0.0987 0.0755 0.63 MAIT L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 9.55e-01 -0.00454 0.0805 0.63 MAIT L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 1.84e-01 0.0924 0.0693 0.624 NK_CD56bright L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 3.01e-01 -0.0531 0.0512 0.624 NK_CD56bright L2
ENSG00000112357 PEX7 345925 sc-eQTL 1.13e-01 -0.144 0.0902 0.624 NK_CD56bright L2
ENSG00000112378 PERP -938930 sc-eQTL 2.66e-01 0.0904 0.081 0.624 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 5.94e-01 -0.0276 0.0518 0.624 NK_CD56bright L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 3.59e-02 -0.165 0.078 0.624 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 4.90e-03 -0.231 0.081 0.624 NK_CD56bright L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 2.39e-02 0.123 0.0541 0.629 NK_CD56dim L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 2.40e-01 0.042 0.0357 0.629 NK_CD56dim L2
ENSG00000112357 PEX7 345925 sc-eQTL 6.51e-01 -0.0428 0.0943 0.629 NK_CD56dim L2
ENSG00000112378 PERP -938930 sc-eQTL 7.36e-01 0.0224 0.0663 0.629 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 3.29e-01 -0.0504 0.0514 0.629 NK_CD56dim L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 7.51e-02 -0.132 0.0737 0.629 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 9.18e-01 0.00799 0.0772 0.629 NK_CD56dim L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 4.36e-02 0.142 0.07 0.616 NK_HLA L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 4.35e-01 0.0468 0.0598 0.616 NK_HLA L2
ENSG00000112357 PEX7 345925 sc-eQTL 3.71e-01 -0.0804 0.0897 0.616 NK_HLA L2
ENSG00000112378 PERP -938930 sc-eQTL 7.88e-02 -0.128 0.0723 0.616 NK_HLA L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 8.77e-01 0.0087 0.0561 0.616 NK_HLA L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 7.89e-02 -0.156 0.0884 0.616 NK_HLA L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 1.88e-01 -0.119 0.09 0.616 NK_HLA L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 9.68e-03 0.148 0.0567 0.629 NK_cytokine L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 9.83e-01 0.000923 0.043 0.629 NK_cytokine L2
ENSG00000112357 PEX7 345925 sc-eQTL 7.25e-01 -0.0319 0.0904 0.629 NK_cytokine L2
ENSG00000112378 PERP -938930 sc-eQTL 4.69e-01 -0.0497 0.0685 0.629 NK_cytokine L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 3.44e-01 -0.0487 0.0513 0.629 NK_cytokine L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 1.48e-01 -0.102 0.0703 0.629 NK_cytokine L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 1.61e-01 -0.109 0.0772 0.629 NK_cytokine L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 3.42e-01 0.108 0.113 0.615 PB L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 8.87e-01 -0.014 0.0983 0.615 PB L2
ENSG00000112357 PEX7 345925 sc-eQTL 6.64e-01 0.051 0.117 0.615 PB L2
ENSG00000112378 PERP -938930 sc-eQTL 9.11e-01 -0.00822 0.073 0.615 PB L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 1.00e+00 -2.45e-05 0.0886 0.615 PB L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 5.08e-02 0.196 0.0991 0.615 PB L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 7.05e-02 0.191 0.105 0.615 PB L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 9.63e-01 -0.00336 0.0718 0.63 Pro_T L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 8.52e-01 -0.0139 0.0744 0.63 Pro_T L2
ENSG00000112357 PEX7 345925 sc-eQTL 6.20e-01 0.0433 0.0871 0.63 Pro_T L2
ENSG00000112378 PERP -938930 sc-eQTL 9.12e-01 -0.00763 0.0693 0.63 Pro_T L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 2.06e-01 -0.0552 0.0436 0.63 Pro_T L2
ENSG00000146410 MTFR2 918154 sc-eQTL 4.53e-01 0.0455 0.0605 0.63 Pro_T L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 2.65e-01 -0.0944 0.0844 0.63 Pro_T L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 1.53e-01 0.121 0.0844 0.63 Pro_T L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 6.25e-02 0.156 0.0833 0.63 Treg L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 3.55e-02 -0.114 0.0537 0.63 Treg L2
ENSG00000112357 PEX7 345925 sc-eQTL 1.42e-01 0.13 0.0882 0.63 Treg L2
ENSG00000112378 PERP -938930 sc-eQTL 1.39e-01 0.142 0.0954 0.63 Treg L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 7.40e-01 -0.0177 0.0533 0.63 Treg L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 4.04e-01 0.0483 0.0577 0.63 Treg L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 2.06e-01 -0.103 0.0811 0.63 Treg L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 4.58e-01 0.0534 0.0719 0.627 cDC L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 3.07e-01 0.0741 0.0723 0.627 cDC L2
ENSG00000112357 PEX7 345925 sc-eQTL 1.37e-01 -0.138 0.0926 0.627 cDC L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 4.04e-01 -0.0593 0.0708 0.627 cDC L2
ENSG00000135525 MAP7 617670 sc-eQTL 4.54e-01 0.0622 0.0828 0.627 cDC L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 2.27e-01 0.0881 0.0727 0.627 cDC L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 1.15e-01 0.145 0.0918 0.627 cDC L2
ENSG00000286646 AL121933.2 384444 sc-eQTL 2.82e-02 -0.208 0.0938 0.627 cDC L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 1.62e-04 0.185 0.0481 0.63 cMono_IL1B L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 8.76e-01 0.00835 0.0533 0.63 cMono_IL1B L2
ENSG00000112357 PEX7 345925 sc-eQTL 2.69e-02 0.197 0.0884 0.63 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 9.62e-01 0.00253 0.0535 0.63 cMono_IL1B L2
ENSG00000135525 MAP7 617670 sc-eQTL 8.18e-01 -0.0178 0.077 0.63 cMono_IL1B L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 5.83e-01 0.0305 0.0556 0.63 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 8.02e-01 -0.0144 0.0571 0.63 cMono_IL1B L2
ENSG00000286646 AL121933.2 384444 sc-eQTL 9.54e-01 -0.00418 0.0715 0.63 cMono_IL1B L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 1.02e-02 0.147 0.0567 0.63 cMono_S100A L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 9.22e-02 0.0994 0.0588 0.63 cMono_S100A L2
ENSG00000112357 PEX7 345925 sc-eQTL 2.60e-01 0.104 0.0921 0.63 cMono_S100A L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 5.67e-01 0.0293 0.0511 0.63 cMono_S100A L2
ENSG00000135525 MAP7 617670 sc-eQTL 1.94e-01 0.112 0.0858 0.63 cMono_S100A L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 3.36e-01 -0.0669 0.0694 0.63 cMono_S100A L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 9.50e-01 -0.00458 0.0735 0.63 cMono_S100A L2
ENSG00000286646 AL121933.2 384444 sc-eQTL 6.13e-01 -0.0363 0.0717 0.63 cMono_S100A L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 1.54e-01 0.123 0.086 0.621 gdT L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 9.69e-01 -0.00301 0.0763 0.621 gdT L2
ENSG00000112357 PEX7 345925 sc-eQTL 9.00e-01 -0.0139 0.11 0.621 gdT L2
ENSG00000112378 PERP -938930 sc-eQTL 6.35e-02 0.177 0.0947 0.621 gdT L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 4.65e-01 0.039 0.0532 0.621 gdT L2
ENSG00000146410 MTFR2 918154 sc-eQTL 1.69e-02 0.199 0.0824 0.621 gdT L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 4.76e-01 -0.0804 0.113 0.621 gdT L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 6.52e-01 -0.0435 0.0965 0.621 gdT L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 7.04e-02 0.11 0.0607 0.629 intMono L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 7.27e-01 0.0282 0.0808 0.629 intMono L2
ENSG00000112357 PEX7 345925 sc-eQTL 9.42e-01 -0.00596 0.0825 0.629 intMono L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 5.99e-01 0.0278 0.0528 0.629 intMono L2
ENSG00000135525 MAP7 617670 sc-eQTL 2.37e-01 -0.096 0.0809 0.629 intMono L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 3.85e-01 -0.0747 0.0858 0.629 intMono L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 7.20e-01 0.0283 0.0787 0.629 intMono L2
ENSG00000286646 AL121933.2 384444 sc-eQTL 7.11e-01 0.0337 0.0908 0.629 intMono L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 6.49e-04 0.24 0.0694 0.631 ncMono L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 4.88e-01 0.0385 0.0554 0.631 ncMono L2
ENSG00000112357 PEX7 345925 sc-eQTL 8.34e-01 -0.0185 0.0885 0.631 ncMono L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 4.43e-01 0.0486 0.0631 0.631 ncMono L2
ENSG00000135525 MAP7 617670 sc-eQTL 6.40e-01 -0.0366 0.0781 0.631 ncMono L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 2.81e-01 -0.0886 0.0819 0.631 ncMono L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 9.14e-01 -0.00852 0.0791 0.631 ncMono L2
ENSG00000286646 AL121933.2 384444 sc-eQTL 2.32e-01 -0.0996 0.0831 0.631 ncMono L2
ENSG00000027697 IFNGR1 -50960 sc-eQTL 6.77e-01 0.0352 0.0841 0.638 pDC L2
ENSG00000029363 BCLAF1 878638 sc-eQTL 6.70e-02 -0.115 0.0625 0.638 pDC L2
ENSG00000112357 PEX7 345925 sc-eQTL 9.50e-02 -0.154 0.0918 0.638 pDC L2
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 3.12e-01 -0.0789 0.0778 0.638 pDC L2
ENSG00000135525 MAP7 617670 sc-eQTL 6.72e-02 -0.118 0.064 0.638 pDC L2
ENSG00000197442 MAP3K5 376012 sc-eQTL 7.98e-01 0.0265 0.104 0.638 pDC L2
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 6.01e-01 -0.0415 0.0792 0.638 pDC L2
ENSG00000286646 AL121933.2 384444 sc-eQTL 9.65e-01 0.00422 0.0955 0.638 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -50960 sc-eQTL 5.74e-02 0.139 0.0725 0.63 B_Memory LOneK1K
ENSG00000029363 BCLAF1 878638 sc-eQTL 3.03e-01 -0.0423 0.041 0.63 B_Memory LOneK1K
ENSG00000112357 PEX7 345925 sc-eQTL 1.65e-01 -0.117 0.0837 0.63 B_Memory LOneK1K
ENSG00000112378 PERP -938930 sc-eQTL 9.21e-01 -0.00775 0.0782 0.63 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 8.46e-01 0.01 0.0516 0.63 B_Memory LOneK1K
ENSG00000197442 MAP3K5 376012 sc-eQTL 5.48e-02 -0.131 0.0677 0.63 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 1.96e-01 -0.113 0.0869 0.63 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -50960 sc-eQTL 6.73e-01 0.0315 0.0746 0.63 B_Naive LOneK1K
ENSG00000029363 BCLAF1 878638 sc-eQTL 2.96e-01 -0.0358 0.0342 0.63 B_Naive LOneK1K
ENSG00000112357 PEX7 345925 sc-eQTL 6.64e-01 0.0394 0.0908 0.63 B_Naive LOneK1K
ENSG00000112378 PERP -938930 sc-eQTL 5.52e-01 0.0484 0.0812 0.63 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 8.96e-01 -0.00562 0.0427 0.63 B_Naive LOneK1K
ENSG00000197442 MAP3K5 376012 sc-eQTL 8.73e-01 -0.01 0.0626 0.63 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 7.39e-02 -0.136 0.0755 0.63 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -50960 sc-eQTL 1.21e-04 0.189 0.0483 0.63 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 878638 sc-eQTL 5.19e-01 0.0301 0.0466 0.63 CD14_Mono LOneK1K
ENSG00000112357 PEX7 345925 sc-eQTL 4.23e-02 0.182 0.089 0.63 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 8.55e-01 0.00848 0.0463 0.63 CD14_Mono LOneK1K
ENSG00000135525 MAP7 617670 sc-eQTL 3.71e-01 0.0719 0.0802 0.63 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 376012 sc-eQTL 9.47e-01 -0.00361 0.0543 0.63 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 9.19e-01 0.00564 0.0555 0.63 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 384444 sc-eQTL 5.44e-01 -0.0393 0.0645 0.63 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -50960 sc-eQTL 2.73e-04 0.213 0.0575 0.629 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 878638 sc-eQTL 3.35e-01 0.0517 0.0535 0.629 CD16_Mono LOneK1K
ENSG00000112357 PEX7 345925 sc-eQTL 8.88e-01 -0.0126 0.0896 0.629 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 9.42e-01 0.00407 0.0555 0.629 CD16_Mono LOneK1K
ENSG00000135525 MAP7 617670 sc-eQTL 1.60e-01 -0.121 0.0862 0.629 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 376012 sc-eQTL 2.76e-01 -0.0774 0.0709 0.629 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 8.98e-01 -0.00952 0.0743 0.629 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 384444 sc-eQTL 6.96e-01 -0.033 0.0844 0.629 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -50960 sc-eQTL 2.76e-02 0.123 0.0554 0.629 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 878638 sc-eQTL 4.83e-01 0.0228 0.0325 0.629 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 345925 sc-eQTL 3.46e-01 -0.0892 0.0944 0.629 NK_CD56dim LOneK1K
ENSG00000112378 PERP -938930 sc-eQTL 1.26e-01 -0.0896 0.0584 0.629 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -698725 sc-eQTL 3.51e-01 -0.0476 0.051 0.629 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 376012 sc-eQTL 6.18e-02 -0.129 0.0685 0.629 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -699744 sc-eQTL 3.19e-01 -0.0712 0.0713 0.629 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -50960 pQTL 9.66e-05 0.0628 0.016 0.0 0.0 0.406
ENSG00000027697 IFNGR1 -50960 eQTL 1.02e-20 0.124 0.013 0.0 0.0 0.417

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -50960 1.04e-05 9.82e-06 1.51e-06 6.04e-06 2.35e-06 4.8e-06 1.11e-05 2.19e-06 9.63e-06 5.3e-06 1.24e-05 5.59e-06 1.5e-05 3.77e-06 3.33e-06 6.33e-06 4.62e-06 7.75e-06 2.6e-06 2.84e-06 5.62e-06 1e-05 8.49e-06 3.25e-06 1.48e-05 4.03e-06 5.04e-06 4.09e-06 1.04e-05 8.58e-06 5.69e-06 9.99e-07 1.17e-06 3.37e-06 4.59e-06 2.66e-06 1.87e-06 1.86e-06 2.16e-06 1.04e-06 9.98e-07 1.28e-05 1.46e-06 1.59e-07 8.09e-07 1.71e-06 1.8e-06 6.93e-07 4.62e-07