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Genes within 1Mb (chr6:137142157:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -77292 sc-eQTL 4.92e-01 -0.052 0.0757 0.718 B L1
ENSG00000029363 BCLAF1 852306 sc-eQTL 2.78e-02 -0.0739 0.0333 0.718 B L1
ENSG00000112357 PEX7 319593 sc-eQTL 4.62e-01 0.066 0.0895 0.718 B L1
ENSG00000112378 PERP -965262 sc-eQTL 6.54e-02 -0.109 0.0588 0.718 B L1
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 4.64e-01 -0.035 0.0477 0.718 B L1
ENSG00000197442 MAP3K5 349680 sc-eQTL 9.24e-01 -0.00635 0.0666 0.718 B L1
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 1.83e-01 -0.1 0.0749 0.718 B L1
ENSG00000027697 IFNGR1 -77292 sc-eQTL 8.50e-02 0.0892 0.0515 0.718 CD4T L1
ENSG00000029363 BCLAF1 852306 sc-eQTL 4.86e-02 -0.0772 0.0389 0.718 CD4T L1
ENSG00000112357 PEX7 319593 sc-eQTL 5.41e-01 0.0511 0.0835 0.718 CD4T L1
ENSG00000112378 PERP -965262 sc-eQTL 9.65e-02 0.0931 0.0558 0.718 CD4T L1
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 5.68e-01 0.0301 0.0526 0.718 CD4T L1
ENSG00000197442 MAP3K5 349680 sc-eQTL 1.18e-01 -0.0625 0.0398 0.718 CD4T L1
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 5.92e-02 -0.125 0.0657 0.718 CD4T L1
ENSG00000027697 IFNGR1 -77292 sc-eQTL 1.56e-01 0.0826 0.058 0.718 CD8T L1
ENSG00000029363 BCLAF1 852306 sc-eQTL 5.14e-01 -0.0257 0.0394 0.718 CD8T L1
ENSG00000112357 PEX7 319593 sc-eQTL 3.95e-01 0.0827 0.097 0.718 CD8T L1
ENSG00000112378 PERP -965262 sc-eQTL 7.99e-01 -0.0162 0.0635 0.718 CD8T L1
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 5.24e-01 0.0313 0.049 0.718 CD8T L1
ENSG00000197442 MAP3K5 349680 sc-eQTL 4.18e-02 -0.105 0.0513 0.718 CD8T L1
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 8.07e-01 0.0176 0.072 0.718 CD8T L1
ENSG00000027697 IFNGR1 -77292 sc-eQTL 8.40e-01 -0.0145 0.0717 0.721 DC L1
ENSG00000029363 BCLAF1 852306 sc-eQTL 8.74e-01 0.0103 0.0645 0.721 DC L1
ENSG00000112357 PEX7 319593 sc-eQTL 4.09e-01 -0.0834 0.101 0.721 DC L1
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 3.69e-01 -0.0689 0.0765 0.721 DC L1
ENSG00000135525 MAP7 591338 sc-eQTL 2.18e-01 0.102 0.0827 0.721 DC L1
ENSG00000197442 MAP3K5 349680 sc-eQTL 2.86e-01 -0.0849 0.0793 0.721 DC L1
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 6.11e-01 0.0398 0.078 0.721 DC L1
ENSG00000286646 AL121933.2 358112 sc-eQTL 6.46e-01 0.0477 0.104 0.721 DC L1
ENSG00000027697 IFNGR1 -77292 sc-eQTL 3.89e-02 0.12 0.0577 0.718 Mono L1
ENSG00000029363 BCLAF1 852306 sc-eQTL 9.45e-01 -0.00346 0.0499 0.718 Mono L1
ENSG00000112357 PEX7 319593 sc-eQTL 9.12e-01 -0.0109 0.0981 0.718 Mono L1
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 6.22e-01 0.0244 0.0494 0.718 Mono L1
ENSG00000135525 MAP7 591338 sc-eQTL 9.35e-01 -0.00706 0.0866 0.718 Mono L1
ENSG00000197442 MAP3K5 349680 sc-eQTL 4.29e-01 -0.0457 0.0576 0.718 Mono L1
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 9.67e-01 -0.00254 0.0613 0.718 Mono L1
ENSG00000286646 AL121933.2 358112 sc-eQTL 3.13e-02 0.15 0.0691 0.718 Mono L1
ENSG00000027697 IFNGR1 -77292 sc-eQTL 2.95e-01 0.0682 0.065 0.719 NK L1
ENSG00000029363 BCLAF1 852306 sc-eQTL 5.18e-01 0.0224 0.0346 0.719 NK L1
ENSG00000112357 PEX7 319593 sc-eQTL 3.02e-01 -0.104 0.1 0.719 NK L1
ENSG00000112378 PERP -965262 sc-eQTL 6.69e-01 0.0271 0.0634 0.719 NK L1
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 8.38e-01 0.0111 0.0542 0.719 NK L1
ENSG00000197442 MAP3K5 349680 sc-eQTL 3.60e-03 -0.224 0.0762 0.719 NK L1
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 2.31e-01 -0.0921 0.0766 0.719 NK L1
ENSG00000027697 IFNGR1 -77292 sc-eQTL 9.52e-01 0.00363 0.0606 0.718 Other_T L1
ENSG00000029363 BCLAF1 852306 sc-eQTL 9.90e-01 0.000639 0.0508 0.718 Other_T L1
ENSG00000112357 PEX7 319593 sc-eQTL 9.91e-01 -0.00109 0.0987 0.718 Other_T L1
ENSG00000112378 PERP -965262 sc-eQTL 5.77e-01 0.0442 0.0792 0.718 Other_T L1
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 7.44e-01 0.0123 0.0377 0.718 Other_T L1
ENSG00000146410 MTFR2 891822 sc-eQTL 9.81e-01 0.00138 0.0571 0.718 Other_T L1
ENSG00000197442 MAP3K5 349680 sc-eQTL 3.73e-02 -0.151 0.072 0.718 Other_T L1
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 5.63e-01 0.0433 0.0747 0.718 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -77292 sc-eQTL 2.60e-01 0.122 0.108 0.737 B_Activated L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 4.15e-01 0.0716 0.0875 0.737 B_Activated L2
ENSG00000112357 PEX7 319593 sc-eQTL 5.64e-02 0.202 0.105 0.737 B_Activated L2
ENSG00000112378 PERP -965262 sc-eQTL 7.09e-01 0.0206 0.0549 0.737 B_Activated L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 3.08e-01 0.109 0.106 0.737 B_Activated L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 5.68e-01 -0.0682 0.119 0.737 B_Activated L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 6.04e-01 -0.0483 0.093 0.737 B_Activated L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 3.03e-01 -0.093 0.0901 0.719 B_Intermediate L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 3.11e-01 -0.0521 0.0513 0.719 B_Intermediate L2
ENSG00000112357 PEX7 319593 sc-eQTL 9.58e-01 -0.00497 0.0945 0.719 B_Intermediate L2
ENSG00000112378 PERP -965262 sc-eQTL 5.28e-01 -0.0544 0.0861 0.719 B_Intermediate L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 7.50e-01 0.0216 0.0676 0.719 B_Intermediate L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 7.09e-02 -0.147 0.0811 0.719 B_Intermediate L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 8.69e-01 0.0159 0.0959 0.719 B_Intermediate L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 5.29e-01 -0.0626 0.0992 0.718 B_Memory L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 1.34e-01 -0.0882 0.0587 0.718 B_Memory L2
ENSG00000112357 PEX7 319593 sc-eQTL 8.77e-01 0.0155 0.1 0.718 B_Memory L2
ENSG00000112378 PERP -965262 sc-eQTL 1.49e-01 -0.136 0.0939 0.718 B_Memory L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 6.44e-01 -0.0301 0.0649 0.718 B_Memory L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 3.37e-01 0.0852 0.0885 0.718 B_Memory L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 4.82e-01 -0.0681 0.0965 0.718 B_Memory L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 4.11e-01 -0.0635 0.077 0.718 B_Naive1 L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 6.35e-01 -0.0209 0.0441 0.718 B_Naive1 L2
ENSG00000112357 PEX7 319593 sc-eQTL 4.60e-01 -0.0754 0.102 0.718 B_Naive1 L2
ENSG00000112378 PERP -965262 sc-eQTL 4.10e-01 0.0733 0.0889 0.718 B_Naive1 L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 7.60e-01 -0.0158 0.0516 0.718 B_Naive1 L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 1.88e-01 0.0955 0.0723 0.718 B_Naive1 L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 8.47e-01 -0.0156 0.0809 0.718 B_Naive1 L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 2.33e-01 -0.112 0.0935 0.719 B_Naive2 L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 9.15e-02 -0.0916 0.054 0.719 B_Naive2 L2
ENSG00000112357 PEX7 319593 sc-eQTL 1.58e-01 0.145 0.102 0.719 B_Naive2 L2
ENSG00000112378 PERP -965262 sc-eQTL 7.78e-01 -0.0211 0.0748 0.719 B_Naive2 L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 3.26e-01 -0.0734 0.0746 0.719 B_Naive2 L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 7.86e-01 -0.0216 0.0795 0.719 B_Naive2 L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 1.67e-01 -0.133 0.0962 0.719 B_Naive2 L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 4.43e-01 -0.0666 0.0865 0.711 CD4_CTL L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 8.02e-02 -0.134 0.0763 0.711 CD4_CTL L2
ENSG00000112357 PEX7 319593 sc-eQTL 1.18e-01 0.15 0.0955 0.711 CD4_CTL L2
ENSG00000112378 PERP -965262 sc-eQTL 6.24e-01 0.0477 0.0973 0.711 CD4_CTL L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 4.15e-01 -0.0463 0.0567 0.711 CD4_CTL L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 1.01e-01 -0.148 0.09 0.711 CD4_CTL L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 4.01e-01 0.0743 0.0883 0.711 CD4_CTL L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 4.84e-01 0.0344 0.0491 0.718 CD4_Naive L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 2.49e-01 -0.0455 0.0394 0.718 CD4_Naive L2
ENSG00000112357 PEX7 319593 sc-eQTL 6.04e-01 0.0482 0.0928 0.718 CD4_Naive L2
ENSG00000112378 PERP -965262 sc-eQTL 8.02e-01 0.0193 0.0766 0.718 CD4_Naive L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 5.89e-01 0.029 0.0537 0.718 CD4_Naive L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 2.74e-01 -0.0432 0.0394 0.718 CD4_Naive L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 5.45e-02 -0.133 0.069 0.718 CD4_Naive L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 3.23e-01 0.068 0.0686 0.718 CD4_TCM L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 8.51e-02 -0.0746 0.0431 0.718 CD4_TCM L2
ENSG00000112357 PEX7 319593 sc-eQTL 7.07e-01 0.038 0.101 0.718 CD4_TCM L2
ENSG00000112378 PERP -965262 sc-eQTL 4.46e-01 0.0651 0.0853 0.718 CD4_TCM L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 9.22e-01 0.00487 0.0496 0.718 CD4_TCM L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 5.81e-01 -0.0312 0.0564 0.718 CD4_TCM L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 7.05e-01 -0.0263 0.0694 0.718 CD4_TCM L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 5.02e-02 0.152 0.0769 0.718 CD4_TEM L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 2.86e-01 -0.0588 0.0549 0.718 CD4_TEM L2
ENSG00000112357 PEX7 319593 sc-eQTL 5.15e-01 0.0654 0.1 0.718 CD4_TEM L2
ENSG00000112378 PERP -965262 sc-eQTL 7.66e-01 0.0242 0.0812 0.718 CD4_TEM L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 6.10e-01 0.0263 0.0516 0.718 CD4_TEM L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 1.85e-01 -0.105 0.0793 0.718 CD4_TEM L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 5.02e-01 -0.0555 0.0826 0.718 CD4_TEM L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 2.27e-01 0.0836 0.069 0.718 CD8_CTL L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 2.50e-01 -0.053 0.046 0.718 CD8_CTL L2
ENSG00000112357 PEX7 319593 sc-eQTL 5.34e-01 -0.0592 0.0952 0.718 CD8_CTL L2
ENSG00000112378 PERP -965262 sc-eQTL 7.10e-01 -0.0341 0.0916 0.718 CD8_CTL L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 5.72e-01 -0.033 0.0582 0.718 CD8_CTL L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 4.55e-01 -0.0614 0.0821 0.718 CD8_CTL L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 9.44e-01 -0.00573 0.0819 0.718 CD8_CTL L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 2.64e-01 0.0782 0.0698 0.718 CD8_Naive L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 3.96e-01 -0.0415 0.0488 0.718 CD8_Naive L2
ENSG00000112357 PEX7 319593 sc-eQTL 1.65e-01 0.141 0.101 0.718 CD8_Naive L2
ENSG00000112378 PERP -965262 sc-eQTL 9.60e-01 -0.00384 0.0771 0.718 CD8_Naive L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 4.44e-01 0.0419 0.0547 0.718 CD8_Naive L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 1.49e-02 -0.157 0.064 0.718 CD8_Naive L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 8.80e-01 -0.0122 0.081 0.718 CD8_Naive L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 7.22e-02 0.169 0.0937 0.725 CD8_TCM L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 1.21e-02 -0.177 0.0698 0.725 CD8_TCM L2
ENSG00000112357 PEX7 319593 sc-eQTL 4.07e-01 0.09 0.108 0.725 CD8_TCM L2
ENSG00000112378 PERP -965262 sc-eQTL 9.29e-01 0.00945 0.106 0.725 CD8_TCM L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 7.83e-01 -0.0141 0.0512 0.725 CD8_TCM L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 1.01e-01 -0.15 0.0908 0.725 CD8_TCM L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 1.46e-01 0.136 0.0932 0.725 CD8_TCM L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 4.62e-01 0.065 0.0881 0.715 CD8_TEM L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 1.43e-01 -0.122 0.0828 0.715 CD8_TEM L2
ENSG00000112357 PEX7 319593 sc-eQTL 2.71e-01 0.112 0.101 0.715 CD8_TEM L2
ENSG00000112378 PERP -965262 sc-eQTL 1.52e-01 0.151 0.105 0.715 CD8_TEM L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 6.21e-01 0.0322 0.065 0.715 CD8_TEM L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 1.27e-01 -0.153 0.1 0.715 CD8_TEM L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 6.72e-01 0.0409 0.0965 0.715 CD8_TEM L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 7.90e-01 0.0188 0.0703 0.716 MAIT L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 8.74e-01 0.00926 0.0584 0.716 MAIT L2
ENSG00000112357 PEX7 319593 sc-eQTL 5.31e-01 0.0598 0.0953 0.716 MAIT L2
ENSG00000112378 PERP -965262 sc-eQTL 5.26e-01 0.063 0.0993 0.716 MAIT L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 9.59e-01 -0.00244 0.0473 0.716 MAIT L2
ENSG00000146410 MTFR2 891822 sc-eQTL 8.31e-01 -0.0168 0.0788 0.716 MAIT L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 1.57e-01 -0.117 0.082 0.716 MAIT L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 8.70e-01 0.0144 0.0875 0.716 MAIT L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 9.09e-01 0.00879 0.0767 0.713 NK_CD56bright L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 3.81e-01 -0.0496 0.0565 0.713 NK_CD56bright L2
ENSG00000112357 PEX7 319593 sc-eQTL 5.60e-01 -0.0582 0.0998 0.713 NK_CD56bright L2
ENSG00000112378 PERP -965262 sc-eQTL 4.41e-01 0.069 0.0894 0.713 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 9.33e-01 0.00478 0.0571 0.713 NK_CD56bright L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 1.79e-02 -0.204 0.0856 0.713 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 3.90e-01 -0.0782 0.0909 0.713 NK_CD56bright L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 5.65e-01 0.0346 0.06 0.718 NK_CD56dim L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 6.80e-01 0.0162 0.0392 0.718 NK_CD56dim L2
ENSG00000112357 PEX7 319593 sc-eQTL 4.96e-01 -0.0705 0.103 0.718 NK_CD56dim L2
ENSG00000112378 PERP -965262 sc-eQTL 7.18e-01 0.0263 0.0727 0.718 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 7.73e-01 -0.0164 0.0566 0.718 NK_CD56dim L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 2.07e-02 -0.188 0.0804 0.718 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 3.51e-01 -0.0791 0.0846 0.718 NK_CD56dim L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 3.36e-01 0.0742 0.0769 0.71 NK_HLA L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 4.54e-01 0.0489 0.0652 0.71 NK_HLA L2
ENSG00000112357 PEX7 319593 sc-eQTL 7.19e-01 -0.0353 0.0979 0.71 NK_HLA L2
ENSG00000112378 PERP -965262 sc-eQTL 7.84e-02 -0.139 0.0788 0.71 NK_HLA L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 7.72e-01 -0.0177 0.0611 0.71 NK_HLA L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 1.32e-01 -0.146 0.0966 0.71 NK_HLA L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 2.60e-03 -0.294 0.0962 0.71 NK_HLA L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 1.42e-01 0.0929 0.063 0.718 NK_cytokine L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 3.11e-01 0.048 0.0472 0.718 NK_cytokine L2
ENSG00000112357 PEX7 319593 sc-eQTL 7.14e-01 0.0366 0.0994 0.718 NK_cytokine L2
ENSG00000112378 PERP -965262 sc-eQTL 9.70e-01 -0.00285 0.0755 0.718 NK_cytokine L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 8.37e-01 -0.0117 0.0566 0.718 NK_cytokine L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 2.79e-02 -0.17 0.0768 0.718 NK_cytokine L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 1.88e-01 -0.112 0.0849 0.718 NK_cytokine L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 7.07e-01 -0.0471 0.125 0.733 PB L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 9.11e-01 0.012 0.108 0.733 PB L2
ENSG00000112357 PEX7 319593 sc-eQTL 3.04e-01 0.132 0.128 0.733 PB L2
ENSG00000112378 PERP -965262 sc-eQTL 8.68e-01 0.0133 0.0801 0.733 PB L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 8.28e-01 -0.0212 0.0972 0.733 PB L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 8.64e-02 0.189 0.109 0.733 PB L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 5.34e-01 0.0728 0.117 0.733 PB L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 5.15e-01 0.0517 0.0792 0.722 Pro_T L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 5.52e-01 -0.049 0.0822 0.722 Pro_T L2
ENSG00000112357 PEX7 319593 sc-eQTL 4.38e-01 -0.0747 0.0962 0.722 Pro_T L2
ENSG00000112378 PERP -965262 sc-eQTL 7.78e-01 0.0216 0.0766 0.722 Pro_T L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 6.39e-01 -0.0227 0.0483 0.722 Pro_T L2
ENSG00000146410 MTFR2 891822 sc-eQTL 8.19e-01 -0.0154 0.067 0.722 Pro_T L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 2.05e-01 -0.118 0.0932 0.722 Pro_T L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 7.47e-02 0.167 0.093 0.722 Pro_T L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 3.13e-01 0.0933 0.0923 0.718 Treg L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 6.91e-02 -0.108 0.0593 0.718 Treg L2
ENSG00000112357 PEX7 319593 sc-eQTL 4.02e-01 0.0819 0.0976 0.718 Treg L2
ENSG00000112378 PERP -965262 sc-eQTL 3.63e-02 0.22 0.105 0.718 Treg L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 7.29e-01 0.0204 0.0588 0.718 Treg L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 9.64e-01 0.00288 0.0637 0.718 Treg L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 1.16e-01 -0.141 0.0892 0.718 Treg L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 5.60e-01 0.0459 0.0785 0.712 cDC L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 9.04e-01 -0.00961 0.0792 0.712 cDC L2
ENSG00000112357 PEX7 319593 sc-eQTL 8.16e-01 -0.0237 0.102 0.712 cDC L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 5.49e-01 -0.0464 0.0774 0.712 cDC L2
ENSG00000135525 MAP7 591338 sc-eQTL 1.61e-01 0.127 0.0901 0.712 cDC L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 6.08e-01 -0.0409 0.0797 0.712 cDC L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 6.51e-01 0.0457 0.101 0.712 cDC L2
ENSG00000286646 AL121933.2 358112 sc-eQTL 4.58e-01 -0.077 0.104 0.712 cDC L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 1.68e-02 0.129 0.0537 0.718 cMono_IL1B L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 8.98e-01 0.00751 0.0584 0.718 cMono_IL1B L2
ENSG00000112357 PEX7 319593 sc-eQTL 4.35e-01 0.0764 0.0978 0.718 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 5.09e-01 0.0388 0.0586 0.718 cMono_IL1B L2
ENSG00000135525 MAP7 591338 sc-eQTL 3.97e-01 -0.0716 0.0843 0.718 cMono_IL1B L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 7.68e-01 0.018 0.061 0.718 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 8.43e-01 -0.0124 0.0626 0.718 cMono_IL1B L2
ENSG00000286646 AL121933.2 358112 sc-eQTL 1.45e-01 0.114 0.078 0.718 cMono_IL1B L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 2.29e-01 0.0765 0.0634 0.718 cMono_S100A L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 3.11e-01 0.0663 0.0652 0.718 cMono_S100A L2
ENSG00000112357 PEX7 319593 sc-eQTL 9.38e-01 0.00795 0.102 0.718 cMono_S100A L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 6.46e-01 0.026 0.0565 0.718 cMono_S100A L2
ENSG00000135525 MAP7 591338 sc-eQTL 7.39e-02 0.17 0.0945 0.718 cMono_S100A L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 2.94e-01 -0.0806 0.0767 0.718 cMono_S100A L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 7.78e-01 -0.023 0.0812 0.718 cMono_S100A L2
ENSG00000286646 AL121933.2 358112 sc-eQTL 7.74e-01 0.0228 0.0792 0.718 cMono_S100A L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 3.99e-01 0.0774 0.0914 0.706 gdT L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 9.05e-01 -0.00961 0.0807 0.706 gdT L2
ENSG00000112357 PEX7 319593 sc-eQTL 4.10e-01 -0.0957 0.116 0.706 gdT L2
ENSG00000112378 PERP -965262 sc-eQTL 1.85e-01 0.134 0.101 0.706 gdT L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 2.58e-01 0.0638 0.0561 0.706 gdT L2
ENSG00000146410 MTFR2 891822 sc-eQTL 2.84e-02 0.194 0.0875 0.706 gdT L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 3.57e-01 -0.11 0.119 0.706 gdT L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 8.69e-01 -0.0168 0.102 0.706 gdT L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 4.04e-01 0.0564 0.0674 0.718 intMono L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 2.10e-01 0.112 0.0888 0.718 intMono L2
ENSG00000112357 PEX7 319593 sc-eQTL 1.13e-01 -0.144 0.0905 0.718 intMono L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 1.22e-01 0.0901 0.058 0.718 intMono L2
ENSG00000135525 MAP7 591338 sc-eQTL 1.97e-01 -0.116 0.0892 0.718 intMono L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 2.42e-01 -0.111 0.0946 0.718 intMono L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 6.85e-01 0.0353 0.0869 0.718 intMono L2
ENSG00000286646 AL121933.2 358112 sc-eQTL 1.19e-02 0.25 0.0986 0.718 intMono L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 9.90e-02 0.133 0.0804 0.717 ncMono L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 3.23e-01 -0.0622 0.0628 0.717 ncMono L2
ENSG00000112357 PEX7 319593 sc-eQTL 6.75e-01 -0.0422 0.1 0.717 ncMono L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 1.82e-01 0.0956 0.0713 0.717 ncMono L2
ENSG00000135525 MAP7 591338 sc-eQTL 6.89e-02 -0.161 0.0878 0.717 ncMono L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 7.63e-01 -0.0281 0.0931 0.717 ncMono L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 9.99e-01 0.000106 0.0896 0.717 ncMono L2
ENSG00000286646 AL121933.2 358112 sc-eQTL 3.11e-01 0.0957 0.0942 0.717 ncMono L2
ENSG00000027697 IFNGR1 -77292 sc-eQTL 6.72e-01 0.0399 0.0941 0.729 pDC L2
ENSG00000029363 BCLAF1 852306 sc-eQTL 7.22e-01 -0.0252 0.0706 0.729 pDC L2
ENSG00000112357 PEX7 319593 sc-eQTL 1.22e-01 -0.16 0.103 0.729 pDC L2
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 7.58e-01 -0.0269 0.0873 0.729 pDC L2
ENSG00000135525 MAP7 591338 sc-eQTL 1.53e-01 -0.103 0.0719 0.729 pDC L2
ENSG00000197442 MAP3K5 349680 sc-eQTL 7.47e-01 0.0374 0.116 0.729 pDC L2
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 3.68e-01 -0.0799 0.0884 0.729 pDC L2
ENSG00000286646 AL121933.2 358112 sc-eQTL 7.06e-02 0.192 0.106 0.729 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -77292 sc-eQTL 9.06e-01 0.00945 0.08 0.718 B_Memory LOneK1K
ENSG00000029363 BCLAF1 852306 sc-eQTL 1.54e-01 -0.0639 0.0447 0.718 B_Memory LOneK1K
ENSG00000112357 PEX7 319593 sc-eQTL 5.00e-01 0.0621 0.0919 0.718 B_Memory LOneK1K
ENSG00000112378 PERP -965262 sc-eQTL 6.52e-02 -0.157 0.0848 0.718 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 7.96e-01 0.0146 0.0564 0.718 B_Memory LOneK1K
ENSG00000197442 MAP3K5 349680 sc-eQTL 2.77e-01 -0.0812 0.0745 0.718 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 5.13e-01 -0.0625 0.0953 0.718 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -77292 sc-eQTL 2.46e-01 -0.0933 0.0802 0.718 B_Naive LOneK1K
ENSG00000029363 BCLAF1 852306 sc-eQTL 1.93e-01 -0.0481 0.0368 0.718 B_Naive LOneK1K
ENSG00000112357 PEX7 319593 sc-eQTL 5.79e-01 0.0544 0.0979 0.718 B_Naive LOneK1K
ENSG00000112378 PERP -965262 sc-eQTL 4.13e-01 0.0719 0.0876 0.718 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 7.79e-01 -0.0129 0.0461 0.718 B_Naive LOneK1K
ENSG00000197442 MAP3K5 349680 sc-eQTL 3.61e-01 0.0617 0.0674 0.718 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 2.37e-01 -0.097 0.0818 0.718 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -77292 sc-eQTL 3.59e-02 0.114 0.0542 0.718 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 852306 sc-eQTL 8.05e-01 0.0126 0.051 0.718 CD14_Mono LOneK1K
ENSG00000112357 PEX7 319593 sc-eQTL 6.22e-01 0.0485 0.0983 0.718 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 5.50e-01 0.0303 0.0506 0.718 CD14_Mono LOneK1K
ENSG00000135525 MAP7 591338 sc-eQTL 5.05e-01 0.0586 0.0878 0.718 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 349680 sc-eQTL 6.83e-01 -0.0242 0.0594 0.718 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 9.86e-01 0.00109 0.0607 0.718 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 358112 sc-eQTL 2.34e-01 0.0841 0.0704 0.718 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -77292 sc-eQTL 5.75e-02 0.124 0.0651 0.718 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 852306 sc-eQTL 6.00e-01 0.0312 0.0593 0.718 CD16_Mono LOneK1K
ENSG00000112357 PEX7 319593 sc-eQTL 3.32e-01 -0.0961 0.0989 0.718 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 4.16e-01 0.05 0.0612 0.718 CD16_Mono LOneK1K
ENSG00000135525 MAP7 591338 sc-eQTL 5.96e-02 -0.18 0.095 0.718 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 349680 sc-eQTL 3.30e-01 -0.0767 0.0785 0.718 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 8.03e-01 0.0205 0.0822 0.718 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 358112 sc-eQTL 8.79e-03 0.243 0.0918 0.718 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -77292 sc-eQTL 3.79e-01 0.0543 0.0615 0.718 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 852306 sc-eQTL 2.59e-01 0.0403 0.0356 0.718 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 319593 sc-eQTL 5.55e-01 -0.0614 0.104 0.718 NK_CD56dim LOneK1K
ENSG00000112378 PERP -965262 sc-eQTL 9.69e-01 -0.0025 0.0645 0.718 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -725057 sc-eQTL 8.69e-01 0.00927 0.0561 0.718 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 349680 sc-eQTL 4.86e-03 -0.212 0.0744 0.718 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -726076 sc-eQTL 1.26e-01 -0.12 0.0781 0.718 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -77292 pQTL 0.00548 0.0472 0.017 0.0 0.0 0.29
ENSG00000027697 IFNGR1 -77292 eQTL 8.72e-11 0.0918 0.014 0.0 0.0 0.303

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -77292 9.28e-06 9.98e-06 1.3e-06 5.82e-06 2.36e-06 4.24e-06 1.09e-05 2.18e-06 9.65e-06 5.14e-06 1.24e-05 5.63e-06 1.44e-05 3.69e-06 2.66e-06 6.36e-06 4.52e-06 7.69e-06 2.61e-06 2.83e-06 5.35e-06 9.58e-06 7.99e-06 3.24e-06 1.5e-05 3.77e-06 5.04e-06 4.45e-06 1.02e-05 8.58e-06 5.67e-06 9.86e-07 1.27e-06 3e-06 4.62e-06 2.56e-06 1.72e-06 1.82e-06 1.94e-06 1e-06 9.87e-07 1.29e-05 1.39e-06 2.27e-07 8.01e-07 1.63e-06 1.75e-06 7.48e-07 4.83e-07
ENSG00000112357 \N 319593 1.27e-06 1e-06 2.74e-07 1.17e-06 3.4e-07 5.32e-07 1.57e-06 3.41e-07 1.44e-06 6.18e-07 1.89e-06 7.84e-07 2.34e-06 2.89e-07 5.65e-07 9.19e-07 9.05e-07 8e-07 7.73e-07 6.31e-07 8.11e-07 1.6e-06 8.98e-07 6.57e-07 2.26e-06 4.39e-07 9.15e-07 9.36e-07 1.31e-06 1.32e-06 7.47e-07 2.81e-07 1.99e-07 6.94e-07 5.34e-07 4.49e-07 5.02e-07 2.42e-07 3.89e-07 1.92e-07 2.89e-07 1.6e-06 1.41e-07 1.57e-07 2.83e-07 1.38e-07 2.19e-07 3.77e-08 1.56e-07