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Genes within 1Mb (chr6:137140355:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -79094 sc-eQTL 4.92e-01 -0.052 0.0757 0.718 B L1
ENSG00000029363 BCLAF1 850504 sc-eQTL 2.78e-02 -0.0739 0.0333 0.718 B L1
ENSG00000112357 PEX7 317791 sc-eQTL 4.62e-01 0.066 0.0895 0.718 B L1
ENSG00000112378 PERP -967064 sc-eQTL 6.54e-02 -0.109 0.0588 0.718 B L1
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 4.64e-01 -0.035 0.0477 0.718 B L1
ENSG00000197442 MAP3K5 347878 sc-eQTL 9.24e-01 -0.00635 0.0666 0.718 B L1
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 1.83e-01 -0.1 0.0749 0.718 B L1
ENSG00000027697 IFNGR1 -79094 sc-eQTL 8.50e-02 0.0892 0.0515 0.718 CD4T L1
ENSG00000029363 BCLAF1 850504 sc-eQTL 4.86e-02 -0.0772 0.0389 0.718 CD4T L1
ENSG00000112357 PEX7 317791 sc-eQTL 5.41e-01 0.0511 0.0835 0.718 CD4T L1
ENSG00000112378 PERP -967064 sc-eQTL 9.65e-02 0.0931 0.0558 0.718 CD4T L1
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 5.68e-01 0.0301 0.0526 0.718 CD4T L1
ENSG00000197442 MAP3K5 347878 sc-eQTL 1.18e-01 -0.0625 0.0398 0.718 CD4T L1
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 5.92e-02 -0.125 0.0657 0.718 CD4T L1
ENSG00000027697 IFNGR1 -79094 sc-eQTL 1.56e-01 0.0826 0.058 0.718 CD8T L1
ENSG00000029363 BCLAF1 850504 sc-eQTL 5.14e-01 -0.0257 0.0394 0.718 CD8T L1
ENSG00000112357 PEX7 317791 sc-eQTL 3.95e-01 0.0827 0.097 0.718 CD8T L1
ENSG00000112378 PERP -967064 sc-eQTL 7.99e-01 -0.0162 0.0635 0.718 CD8T L1
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 5.24e-01 0.0313 0.049 0.718 CD8T L1
ENSG00000197442 MAP3K5 347878 sc-eQTL 4.18e-02 -0.105 0.0513 0.718 CD8T L1
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 8.07e-01 0.0176 0.072 0.718 CD8T L1
ENSG00000027697 IFNGR1 -79094 sc-eQTL 8.40e-01 -0.0145 0.0717 0.721 DC L1
ENSG00000029363 BCLAF1 850504 sc-eQTL 8.74e-01 0.0103 0.0645 0.721 DC L1
ENSG00000112357 PEX7 317791 sc-eQTL 4.09e-01 -0.0834 0.101 0.721 DC L1
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 3.69e-01 -0.0689 0.0765 0.721 DC L1
ENSG00000135525 MAP7 589536 sc-eQTL 2.18e-01 0.102 0.0827 0.721 DC L1
ENSG00000197442 MAP3K5 347878 sc-eQTL 2.86e-01 -0.0849 0.0793 0.721 DC L1
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 6.11e-01 0.0398 0.078 0.721 DC L1
ENSG00000286646 AL121933.2 356310 sc-eQTL 6.46e-01 0.0477 0.104 0.721 DC L1
ENSG00000027697 IFNGR1 -79094 sc-eQTL 3.89e-02 0.12 0.0577 0.718 Mono L1
ENSG00000029363 BCLAF1 850504 sc-eQTL 9.45e-01 -0.00346 0.0499 0.718 Mono L1
ENSG00000112357 PEX7 317791 sc-eQTL 9.12e-01 -0.0109 0.0981 0.718 Mono L1
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 6.22e-01 0.0244 0.0494 0.718 Mono L1
ENSG00000135525 MAP7 589536 sc-eQTL 9.35e-01 -0.00706 0.0866 0.718 Mono L1
ENSG00000197442 MAP3K5 347878 sc-eQTL 4.29e-01 -0.0457 0.0576 0.718 Mono L1
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 9.67e-01 -0.00254 0.0613 0.718 Mono L1
ENSG00000286646 AL121933.2 356310 sc-eQTL 3.13e-02 0.15 0.0691 0.718 Mono L1
ENSG00000027697 IFNGR1 -79094 sc-eQTL 2.95e-01 0.0682 0.065 0.719 NK L1
ENSG00000029363 BCLAF1 850504 sc-eQTL 5.18e-01 0.0224 0.0346 0.719 NK L1
ENSG00000112357 PEX7 317791 sc-eQTL 3.02e-01 -0.104 0.1 0.719 NK L1
ENSG00000112378 PERP -967064 sc-eQTL 6.69e-01 0.0271 0.0634 0.719 NK L1
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 8.38e-01 0.0111 0.0542 0.719 NK L1
ENSG00000197442 MAP3K5 347878 sc-eQTL 3.60e-03 -0.224 0.0762 0.719 NK L1
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 2.31e-01 -0.0921 0.0766 0.719 NK L1
ENSG00000027697 IFNGR1 -79094 sc-eQTL 9.52e-01 0.00363 0.0606 0.718 Other_T L1
ENSG00000029363 BCLAF1 850504 sc-eQTL 9.90e-01 0.000639 0.0508 0.718 Other_T L1
ENSG00000112357 PEX7 317791 sc-eQTL 9.91e-01 -0.00109 0.0987 0.718 Other_T L1
ENSG00000112378 PERP -967064 sc-eQTL 5.77e-01 0.0442 0.0792 0.718 Other_T L1
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 7.44e-01 0.0123 0.0377 0.718 Other_T L1
ENSG00000146410 MTFR2 890020 sc-eQTL 9.81e-01 0.00138 0.0571 0.718 Other_T L1
ENSG00000197442 MAP3K5 347878 sc-eQTL 3.73e-02 -0.151 0.072 0.718 Other_T L1
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 5.63e-01 0.0433 0.0747 0.718 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -79094 sc-eQTL 2.60e-01 0.122 0.108 0.737 B_Activated L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 4.15e-01 0.0716 0.0875 0.737 B_Activated L2
ENSG00000112357 PEX7 317791 sc-eQTL 5.64e-02 0.202 0.105 0.737 B_Activated L2
ENSG00000112378 PERP -967064 sc-eQTL 7.09e-01 0.0206 0.0549 0.737 B_Activated L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 3.08e-01 0.109 0.106 0.737 B_Activated L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 5.68e-01 -0.0682 0.119 0.737 B_Activated L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 6.04e-01 -0.0483 0.093 0.737 B_Activated L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 3.03e-01 -0.093 0.0901 0.719 B_Intermediate L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 3.11e-01 -0.0521 0.0513 0.719 B_Intermediate L2
ENSG00000112357 PEX7 317791 sc-eQTL 9.58e-01 -0.00497 0.0945 0.719 B_Intermediate L2
ENSG00000112378 PERP -967064 sc-eQTL 5.28e-01 -0.0544 0.0861 0.719 B_Intermediate L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 7.50e-01 0.0216 0.0676 0.719 B_Intermediate L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 7.09e-02 -0.147 0.0811 0.719 B_Intermediate L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 8.69e-01 0.0159 0.0959 0.719 B_Intermediate L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 5.29e-01 -0.0626 0.0992 0.718 B_Memory L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 1.34e-01 -0.0882 0.0587 0.718 B_Memory L2
ENSG00000112357 PEX7 317791 sc-eQTL 8.77e-01 0.0155 0.1 0.718 B_Memory L2
ENSG00000112378 PERP -967064 sc-eQTL 1.49e-01 -0.136 0.0939 0.718 B_Memory L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 6.44e-01 -0.0301 0.0649 0.718 B_Memory L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 3.37e-01 0.0852 0.0885 0.718 B_Memory L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 4.82e-01 -0.0681 0.0965 0.718 B_Memory L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 4.11e-01 -0.0635 0.077 0.718 B_Naive1 L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 6.35e-01 -0.0209 0.0441 0.718 B_Naive1 L2
ENSG00000112357 PEX7 317791 sc-eQTL 4.60e-01 -0.0754 0.102 0.718 B_Naive1 L2
ENSG00000112378 PERP -967064 sc-eQTL 4.10e-01 0.0733 0.0889 0.718 B_Naive1 L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 7.60e-01 -0.0158 0.0516 0.718 B_Naive1 L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 1.88e-01 0.0955 0.0723 0.718 B_Naive1 L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 8.47e-01 -0.0156 0.0809 0.718 B_Naive1 L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 2.33e-01 -0.112 0.0935 0.719 B_Naive2 L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 9.15e-02 -0.0916 0.054 0.719 B_Naive2 L2
ENSG00000112357 PEX7 317791 sc-eQTL 1.58e-01 0.145 0.102 0.719 B_Naive2 L2
ENSG00000112378 PERP -967064 sc-eQTL 7.78e-01 -0.0211 0.0748 0.719 B_Naive2 L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 3.26e-01 -0.0734 0.0746 0.719 B_Naive2 L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 7.86e-01 -0.0216 0.0795 0.719 B_Naive2 L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 1.67e-01 -0.133 0.0962 0.719 B_Naive2 L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 4.43e-01 -0.0666 0.0865 0.711 CD4_CTL L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 8.02e-02 -0.134 0.0763 0.711 CD4_CTL L2
ENSG00000112357 PEX7 317791 sc-eQTL 1.18e-01 0.15 0.0955 0.711 CD4_CTL L2
ENSG00000112378 PERP -967064 sc-eQTL 6.24e-01 0.0477 0.0973 0.711 CD4_CTL L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 4.15e-01 -0.0463 0.0567 0.711 CD4_CTL L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 1.01e-01 -0.148 0.09 0.711 CD4_CTL L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 4.01e-01 0.0743 0.0883 0.711 CD4_CTL L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 4.84e-01 0.0344 0.0491 0.718 CD4_Naive L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 2.49e-01 -0.0455 0.0394 0.718 CD4_Naive L2
ENSG00000112357 PEX7 317791 sc-eQTL 6.04e-01 0.0482 0.0928 0.718 CD4_Naive L2
ENSG00000112378 PERP -967064 sc-eQTL 8.02e-01 0.0193 0.0766 0.718 CD4_Naive L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 5.89e-01 0.029 0.0537 0.718 CD4_Naive L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 2.74e-01 -0.0432 0.0394 0.718 CD4_Naive L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 5.45e-02 -0.133 0.069 0.718 CD4_Naive L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 3.23e-01 0.068 0.0686 0.718 CD4_TCM L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 8.51e-02 -0.0746 0.0431 0.718 CD4_TCM L2
ENSG00000112357 PEX7 317791 sc-eQTL 7.07e-01 0.038 0.101 0.718 CD4_TCM L2
ENSG00000112378 PERP -967064 sc-eQTL 4.46e-01 0.0651 0.0853 0.718 CD4_TCM L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 9.22e-01 0.00487 0.0496 0.718 CD4_TCM L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 5.81e-01 -0.0312 0.0564 0.718 CD4_TCM L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 7.05e-01 -0.0263 0.0694 0.718 CD4_TCM L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 5.02e-02 0.152 0.0769 0.718 CD4_TEM L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 2.86e-01 -0.0588 0.0549 0.718 CD4_TEM L2
ENSG00000112357 PEX7 317791 sc-eQTL 5.15e-01 0.0654 0.1 0.718 CD4_TEM L2
ENSG00000112378 PERP -967064 sc-eQTL 7.66e-01 0.0242 0.0812 0.718 CD4_TEM L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 6.10e-01 0.0263 0.0516 0.718 CD4_TEM L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 1.85e-01 -0.105 0.0793 0.718 CD4_TEM L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 5.02e-01 -0.0555 0.0826 0.718 CD4_TEM L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 2.27e-01 0.0836 0.069 0.718 CD8_CTL L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 2.50e-01 -0.053 0.046 0.718 CD8_CTL L2
ENSG00000112357 PEX7 317791 sc-eQTL 5.34e-01 -0.0592 0.0952 0.718 CD8_CTL L2
ENSG00000112378 PERP -967064 sc-eQTL 7.10e-01 -0.0341 0.0916 0.718 CD8_CTL L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 5.72e-01 -0.033 0.0582 0.718 CD8_CTL L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 4.55e-01 -0.0614 0.0821 0.718 CD8_CTL L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 9.44e-01 -0.00573 0.0819 0.718 CD8_CTL L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 2.64e-01 0.0782 0.0698 0.718 CD8_Naive L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 3.96e-01 -0.0415 0.0488 0.718 CD8_Naive L2
ENSG00000112357 PEX7 317791 sc-eQTL 1.65e-01 0.141 0.101 0.718 CD8_Naive L2
ENSG00000112378 PERP -967064 sc-eQTL 9.60e-01 -0.00384 0.0771 0.718 CD8_Naive L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 4.44e-01 0.0419 0.0547 0.718 CD8_Naive L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 1.49e-02 -0.157 0.064 0.718 CD8_Naive L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 8.80e-01 -0.0122 0.081 0.718 CD8_Naive L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 7.22e-02 0.169 0.0937 0.725 CD8_TCM L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 1.21e-02 -0.177 0.0698 0.725 CD8_TCM L2
ENSG00000112357 PEX7 317791 sc-eQTL 4.07e-01 0.09 0.108 0.725 CD8_TCM L2
ENSG00000112378 PERP -967064 sc-eQTL 9.29e-01 0.00945 0.106 0.725 CD8_TCM L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 7.83e-01 -0.0141 0.0512 0.725 CD8_TCM L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 1.01e-01 -0.15 0.0908 0.725 CD8_TCM L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 1.46e-01 0.136 0.0932 0.725 CD8_TCM L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 4.62e-01 0.065 0.0881 0.715 CD8_TEM L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 1.43e-01 -0.122 0.0828 0.715 CD8_TEM L2
ENSG00000112357 PEX7 317791 sc-eQTL 2.71e-01 0.112 0.101 0.715 CD8_TEM L2
ENSG00000112378 PERP -967064 sc-eQTL 1.52e-01 0.151 0.105 0.715 CD8_TEM L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 6.21e-01 0.0322 0.065 0.715 CD8_TEM L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 1.27e-01 -0.153 0.1 0.715 CD8_TEM L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 6.72e-01 0.0409 0.0965 0.715 CD8_TEM L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 7.90e-01 0.0188 0.0703 0.716 MAIT L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 8.74e-01 0.00926 0.0584 0.716 MAIT L2
ENSG00000112357 PEX7 317791 sc-eQTL 5.31e-01 0.0598 0.0953 0.716 MAIT L2
ENSG00000112378 PERP -967064 sc-eQTL 5.26e-01 0.063 0.0993 0.716 MAIT L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 9.59e-01 -0.00244 0.0473 0.716 MAIT L2
ENSG00000146410 MTFR2 890020 sc-eQTL 8.31e-01 -0.0168 0.0788 0.716 MAIT L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 1.57e-01 -0.117 0.082 0.716 MAIT L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 8.70e-01 0.0144 0.0875 0.716 MAIT L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 9.09e-01 0.00879 0.0767 0.713 NK_CD56bright L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 3.81e-01 -0.0496 0.0565 0.713 NK_CD56bright L2
ENSG00000112357 PEX7 317791 sc-eQTL 5.60e-01 -0.0582 0.0998 0.713 NK_CD56bright L2
ENSG00000112378 PERP -967064 sc-eQTL 4.41e-01 0.069 0.0894 0.713 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 9.33e-01 0.00478 0.0571 0.713 NK_CD56bright L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 1.79e-02 -0.204 0.0856 0.713 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 3.90e-01 -0.0782 0.0909 0.713 NK_CD56bright L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 5.65e-01 0.0346 0.06 0.718 NK_CD56dim L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 6.80e-01 0.0162 0.0392 0.718 NK_CD56dim L2
ENSG00000112357 PEX7 317791 sc-eQTL 4.96e-01 -0.0705 0.103 0.718 NK_CD56dim L2
ENSG00000112378 PERP -967064 sc-eQTL 7.18e-01 0.0263 0.0727 0.718 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 7.73e-01 -0.0164 0.0566 0.718 NK_CD56dim L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 2.07e-02 -0.188 0.0804 0.718 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 3.51e-01 -0.0791 0.0846 0.718 NK_CD56dim L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 3.36e-01 0.0742 0.0769 0.71 NK_HLA L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 4.54e-01 0.0489 0.0652 0.71 NK_HLA L2
ENSG00000112357 PEX7 317791 sc-eQTL 7.19e-01 -0.0353 0.0979 0.71 NK_HLA L2
ENSG00000112378 PERP -967064 sc-eQTL 7.84e-02 -0.139 0.0788 0.71 NK_HLA L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 7.72e-01 -0.0177 0.0611 0.71 NK_HLA L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 1.32e-01 -0.146 0.0966 0.71 NK_HLA L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 2.60e-03 -0.294 0.0962 0.71 NK_HLA L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 1.42e-01 0.0929 0.063 0.718 NK_cytokine L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 3.11e-01 0.048 0.0472 0.718 NK_cytokine L2
ENSG00000112357 PEX7 317791 sc-eQTL 7.14e-01 0.0366 0.0994 0.718 NK_cytokine L2
ENSG00000112378 PERP -967064 sc-eQTL 9.70e-01 -0.00285 0.0755 0.718 NK_cytokine L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 8.37e-01 -0.0117 0.0566 0.718 NK_cytokine L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 2.79e-02 -0.17 0.0768 0.718 NK_cytokine L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 1.88e-01 -0.112 0.0849 0.718 NK_cytokine L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 7.07e-01 -0.0471 0.125 0.733 PB L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 9.11e-01 0.012 0.108 0.733 PB L2
ENSG00000112357 PEX7 317791 sc-eQTL 3.04e-01 0.132 0.128 0.733 PB L2
ENSG00000112378 PERP -967064 sc-eQTL 8.68e-01 0.0133 0.0801 0.733 PB L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 8.28e-01 -0.0212 0.0972 0.733 PB L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 8.64e-02 0.189 0.109 0.733 PB L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 5.34e-01 0.0728 0.117 0.733 PB L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 5.15e-01 0.0517 0.0792 0.722 Pro_T L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 5.52e-01 -0.049 0.0822 0.722 Pro_T L2
ENSG00000112357 PEX7 317791 sc-eQTL 4.38e-01 -0.0747 0.0962 0.722 Pro_T L2
ENSG00000112378 PERP -967064 sc-eQTL 7.78e-01 0.0216 0.0766 0.722 Pro_T L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 6.39e-01 -0.0227 0.0483 0.722 Pro_T L2
ENSG00000146410 MTFR2 890020 sc-eQTL 8.19e-01 -0.0154 0.067 0.722 Pro_T L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 2.05e-01 -0.118 0.0932 0.722 Pro_T L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 7.47e-02 0.167 0.093 0.722 Pro_T L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 3.13e-01 0.0933 0.0923 0.718 Treg L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 6.91e-02 -0.108 0.0593 0.718 Treg L2
ENSG00000112357 PEX7 317791 sc-eQTL 4.02e-01 0.0819 0.0976 0.718 Treg L2
ENSG00000112378 PERP -967064 sc-eQTL 3.63e-02 0.22 0.105 0.718 Treg L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 7.29e-01 0.0204 0.0588 0.718 Treg L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 9.64e-01 0.00288 0.0637 0.718 Treg L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 1.16e-01 -0.141 0.0892 0.718 Treg L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 5.60e-01 0.0459 0.0785 0.712 cDC L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 9.04e-01 -0.00961 0.0792 0.712 cDC L2
ENSG00000112357 PEX7 317791 sc-eQTL 8.16e-01 -0.0237 0.102 0.712 cDC L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 5.49e-01 -0.0464 0.0774 0.712 cDC L2
ENSG00000135525 MAP7 589536 sc-eQTL 1.61e-01 0.127 0.0901 0.712 cDC L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 6.08e-01 -0.0409 0.0797 0.712 cDC L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 6.51e-01 0.0457 0.101 0.712 cDC L2
ENSG00000286646 AL121933.2 356310 sc-eQTL 4.58e-01 -0.077 0.104 0.712 cDC L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 1.68e-02 0.129 0.0537 0.718 cMono_IL1B L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 8.98e-01 0.00751 0.0584 0.718 cMono_IL1B L2
ENSG00000112357 PEX7 317791 sc-eQTL 4.35e-01 0.0764 0.0978 0.718 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 5.09e-01 0.0388 0.0586 0.718 cMono_IL1B L2
ENSG00000135525 MAP7 589536 sc-eQTL 3.97e-01 -0.0716 0.0843 0.718 cMono_IL1B L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 7.68e-01 0.018 0.061 0.718 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 8.43e-01 -0.0124 0.0626 0.718 cMono_IL1B L2
ENSG00000286646 AL121933.2 356310 sc-eQTL 1.45e-01 0.114 0.078 0.718 cMono_IL1B L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 2.29e-01 0.0765 0.0634 0.718 cMono_S100A L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 3.11e-01 0.0663 0.0652 0.718 cMono_S100A L2
ENSG00000112357 PEX7 317791 sc-eQTL 9.38e-01 0.00795 0.102 0.718 cMono_S100A L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 6.46e-01 0.026 0.0565 0.718 cMono_S100A L2
ENSG00000135525 MAP7 589536 sc-eQTL 7.39e-02 0.17 0.0945 0.718 cMono_S100A L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 2.94e-01 -0.0806 0.0767 0.718 cMono_S100A L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 7.78e-01 -0.023 0.0812 0.718 cMono_S100A L2
ENSG00000286646 AL121933.2 356310 sc-eQTL 7.74e-01 0.0228 0.0792 0.718 cMono_S100A L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 3.99e-01 0.0774 0.0914 0.706 gdT L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 9.05e-01 -0.00961 0.0807 0.706 gdT L2
ENSG00000112357 PEX7 317791 sc-eQTL 4.10e-01 -0.0957 0.116 0.706 gdT L2
ENSG00000112378 PERP -967064 sc-eQTL 1.85e-01 0.134 0.101 0.706 gdT L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 2.58e-01 0.0638 0.0561 0.706 gdT L2
ENSG00000146410 MTFR2 890020 sc-eQTL 2.84e-02 0.194 0.0875 0.706 gdT L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 3.57e-01 -0.11 0.119 0.706 gdT L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 8.69e-01 -0.0168 0.102 0.706 gdT L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 4.04e-01 0.0564 0.0674 0.718 intMono L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 2.10e-01 0.112 0.0888 0.718 intMono L2
ENSG00000112357 PEX7 317791 sc-eQTL 1.13e-01 -0.144 0.0905 0.718 intMono L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 1.22e-01 0.0901 0.058 0.718 intMono L2
ENSG00000135525 MAP7 589536 sc-eQTL 1.97e-01 -0.116 0.0892 0.718 intMono L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 2.42e-01 -0.111 0.0946 0.718 intMono L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 6.85e-01 0.0353 0.0869 0.718 intMono L2
ENSG00000286646 AL121933.2 356310 sc-eQTL 1.19e-02 0.25 0.0986 0.718 intMono L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 9.90e-02 0.133 0.0804 0.717 ncMono L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 3.23e-01 -0.0622 0.0628 0.717 ncMono L2
ENSG00000112357 PEX7 317791 sc-eQTL 6.75e-01 -0.0422 0.1 0.717 ncMono L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 1.82e-01 0.0956 0.0713 0.717 ncMono L2
ENSG00000135525 MAP7 589536 sc-eQTL 6.89e-02 -0.161 0.0878 0.717 ncMono L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 7.63e-01 -0.0281 0.0931 0.717 ncMono L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 9.99e-01 0.000106 0.0896 0.717 ncMono L2
ENSG00000286646 AL121933.2 356310 sc-eQTL 3.11e-01 0.0957 0.0942 0.717 ncMono L2
ENSG00000027697 IFNGR1 -79094 sc-eQTL 6.72e-01 0.0399 0.0941 0.729 pDC L2
ENSG00000029363 BCLAF1 850504 sc-eQTL 7.22e-01 -0.0252 0.0706 0.729 pDC L2
ENSG00000112357 PEX7 317791 sc-eQTL 1.22e-01 -0.16 0.103 0.729 pDC L2
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 7.58e-01 -0.0269 0.0873 0.729 pDC L2
ENSG00000135525 MAP7 589536 sc-eQTL 1.53e-01 -0.103 0.0719 0.729 pDC L2
ENSG00000197442 MAP3K5 347878 sc-eQTL 7.47e-01 0.0374 0.116 0.729 pDC L2
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 3.68e-01 -0.0799 0.0884 0.729 pDC L2
ENSG00000286646 AL121933.2 356310 sc-eQTL 7.06e-02 0.192 0.106 0.729 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -79094 sc-eQTL 9.06e-01 0.00945 0.08 0.718 B_Memory LOneK1K
ENSG00000029363 BCLAF1 850504 sc-eQTL 1.54e-01 -0.0639 0.0447 0.718 B_Memory LOneK1K
ENSG00000112357 PEX7 317791 sc-eQTL 5.00e-01 0.0621 0.0919 0.718 B_Memory LOneK1K
ENSG00000112378 PERP -967064 sc-eQTL 6.52e-02 -0.157 0.0848 0.718 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 7.96e-01 0.0146 0.0564 0.718 B_Memory LOneK1K
ENSG00000197442 MAP3K5 347878 sc-eQTL 2.77e-01 -0.0812 0.0745 0.718 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 5.13e-01 -0.0625 0.0953 0.718 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -79094 sc-eQTL 2.46e-01 -0.0933 0.0802 0.718 B_Naive LOneK1K
ENSG00000029363 BCLAF1 850504 sc-eQTL 1.93e-01 -0.0481 0.0368 0.718 B_Naive LOneK1K
ENSG00000112357 PEX7 317791 sc-eQTL 5.79e-01 0.0544 0.0979 0.718 B_Naive LOneK1K
ENSG00000112378 PERP -967064 sc-eQTL 4.13e-01 0.0719 0.0876 0.718 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 7.79e-01 -0.0129 0.0461 0.718 B_Naive LOneK1K
ENSG00000197442 MAP3K5 347878 sc-eQTL 3.61e-01 0.0617 0.0674 0.718 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 2.37e-01 -0.097 0.0818 0.718 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -79094 sc-eQTL 3.59e-02 0.114 0.0542 0.718 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 850504 sc-eQTL 8.05e-01 0.0126 0.051 0.718 CD14_Mono LOneK1K
ENSG00000112357 PEX7 317791 sc-eQTL 6.22e-01 0.0485 0.0983 0.718 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 5.50e-01 0.0303 0.0506 0.718 CD14_Mono LOneK1K
ENSG00000135525 MAP7 589536 sc-eQTL 5.05e-01 0.0586 0.0878 0.718 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 347878 sc-eQTL 6.83e-01 -0.0242 0.0594 0.718 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 9.86e-01 0.00109 0.0607 0.718 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 356310 sc-eQTL 2.34e-01 0.0841 0.0704 0.718 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -79094 sc-eQTL 5.75e-02 0.124 0.0651 0.718 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 850504 sc-eQTL 6.00e-01 0.0312 0.0593 0.718 CD16_Mono LOneK1K
ENSG00000112357 PEX7 317791 sc-eQTL 3.32e-01 -0.0961 0.0989 0.718 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 4.16e-01 0.05 0.0612 0.718 CD16_Mono LOneK1K
ENSG00000135525 MAP7 589536 sc-eQTL 5.96e-02 -0.18 0.095 0.718 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 347878 sc-eQTL 3.30e-01 -0.0767 0.0785 0.718 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 8.03e-01 0.0205 0.0822 0.718 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 356310 sc-eQTL 8.79e-03 0.243 0.0918 0.718 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -79094 sc-eQTL 3.79e-01 0.0543 0.0615 0.718 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 850504 sc-eQTL 2.59e-01 0.0403 0.0356 0.718 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 317791 sc-eQTL 5.55e-01 -0.0614 0.104 0.718 NK_CD56dim LOneK1K
ENSG00000112378 PERP -967064 sc-eQTL 9.69e-01 -0.0025 0.0645 0.718 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -726859 sc-eQTL 8.69e-01 0.00927 0.0561 0.718 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 347878 sc-eQTL 4.86e-03 -0.212 0.0744 0.718 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -727878 sc-eQTL 1.26e-01 -0.12 0.0781 0.718 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -79094 pQTL 0.00548 0.0472 0.017 0.0 0.0 0.29
ENSG00000027697 IFNGR1 -79094 eQTL 8.72e-11 0.0918 0.014 0.0 0.0 0.303

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -79094 5.58e-06 5.15e-06 5.84e-07 3.15e-06 1.75e-06 1.57e-06 7.3e-06 1.18e-06 5.06e-06 2.91e-06 6.15e-06 3.25e-06 7.77e-06 1.95e-06 1.04e-06 3.84e-06 2.13e-06 3.95e-06 1.49e-06 1.5e-06 2.79e-06 5.41e-06 4.74e-06 1.97e-06 7.95e-06 2.16e-06 2.32e-06 1.6e-06 5.11e-06 5.44e-06 2.87e-06 4.18e-07 7.36e-07 2.16e-06 2.03e-06 1.18e-06 1.02e-06 4.71e-07 8.97e-07 5.01e-07 7.35e-07 6.29e-06 5.26e-07 1.65e-07 7.74e-07 1.32e-06 1.14e-06 6.91e-07 5.14e-07
ENSG00000112357 \N 317791 1.22e-06 8.47e-07 2.62e-07 4.32e-07 1.11e-07 3.2e-07 7.54e-07 2.7e-07 8.08e-07 2.98e-07 1.08e-06 5.51e-07 1.16e-06 1.84e-07 4.15e-07 4.47e-07 7.39e-07 5.16e-07 3.74e-07 3.42e-07 2.29e-07 6.27e-07 5.77e-07 3.62e-07 1.38e-06 2.4e-07 4.91e-07 3.9e-07 7e-07 8.5e-07 4.26e-07 4.4e-08 1.04e-07 2.15e-07 3.68e-07 2.59e-07 1.86e-07 1.21e-07 7.63e-08 8.29e-09 1.39e-07 7.45e-07 6.87e-08 1.07e-08 1.85e-07 3.46e-08 1.83e-07 4.41e-08 5.25e-08