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Genes within 1Mb (chr6:137131400:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -88049 sc-eQTL 2.80e-01 -0.0741 0.0684 0.517 B L1
ENSG00000029363 BCLAF1 841549 sc-eQTL 1.46e-01 0.0443 0.0304 0.517 B L1
ENSG00000112357 PEX7 308836 sc-eQTL 2.59e-01 0.0915 0.0809 0.517 B L1
ENSG00000112378 PERP -976019 sc-eQTL 8.60e-01 0.00949 0.0537 0.517 B L1
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 4.88e-01 0.03 0.0432 0.517 B L1
ENSG00000197442 MAP3K5 338923 sc-eQTL 3.45e-01 -0.057 0.0601 0.517 B L1
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 9.89e-01 -0.000928 0.068 0.517 B L1
ENSG00000027697 IFNGR1 -88049 sc-eQTL 1.13e-03 -0.143 0.0434 0.517 CD4T L1
ENSG00000029363 BCLAF1 841549 sc-eQTL 3.60e-01 0.0309 0.0337 0.517 CD4T L1
ENSG00000112357 PEX7 308836 sc-eQTL 7.78e-01 0.0202 0.0718 0.517 CD4T L1
ENSG00000112378 PERP -976019 sc-eQTL 4.61e-02 -0.0958 0.0477 0.517 CD4T L1
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 9.28e-01 -0.00411 0.0451 0.517 CD4T L1
ENSG00000197442 MAP3K5 338923 sc-eQTL 5.56e-01 -0.0203 0.0344 0.517 CD4T L1
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 8.42e-01 -0.0113 0.0568 0.517 CD4T L1
ENSG00000027697 IFNGR1 -88049 sc-eQTL 1.07e-01 -0.0822 0.0507 0.517 CD8T L1
ENSG00000029363 BCLAF1 841549 sc-eQTL 7.31e-01 0.0119 0.0345 0.517 CD8T L1
ENSG00000112357 PEX7 308836 sc-eQTL 5.19e-02 -0.165 0.0844 0.517 CD8T L1
ENSG00000112378 PERP -976019 sc-eQTL 6.25e-02 -0.103 0.0552 0.517 CD8T L1
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 4.71e-01 0.031 0.0429 0.517 CD8T L1
ENSG00000197442 MAP3K5 338923 sc-eQTL 3.44e-01 0.043 0.0453 0.517 CD8T L1
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 7.32e-01 0.0216 0.0631 0.517 CD8T L1
ENSG00000027697 IFNGR1 -88049 sc-eQTL 6.56e-01 0.0279 0.0626 0.516 DC L1
ENSG00000029363 BCLAF1 841549 sc-eQTL 7.24e-01 -0.02 0.0563 0.516 DC L1
ENSG00000112357 PEX7 308836 sc-eQTL 9.11e-01 0.00989 0.0882 0.516 DC L1
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 6.76e-01 0.028 0.0669 0.516 DC L1
ENSG00000135525 MAP7 580581 sc-eQTL 5.12e-01 -0.0475 0.0724 0.516 DC L1
ENSG00000197442 MAP3K5 338923 sc-eQTL 2.55e-01 0.079 0.0692 0.516 DC L1
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 7.55e-01 0.0213 0.0682 0.516 DC L1
ENSG00000286646 AL121933.2 347355 sc-eQTL 6.27e-01 -0.0441 0.0906 0.516 DC L1
ENSG00000027697 IFNGR1 -88049 sc-eQTL 3.11e-02 -0.11 0.0506 0.517 Mono L1
ENSG00000029363 BCLAF1 841549 sc-eQTL 5.67e-01 0.0251 0.0437 0.517 Mono L1
ENSG00000112357 PEX7 308836 sc-eQTL 7.63e-01 -0.026 0.0861 0.517 Mono L1
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 9.48e-01 -0.00286 0.0434 0.517 Mono L1
ENSG00000135525 MAP7 580581 sc-eQTL 5.45e-01 -0.046 0.0759 0.517 Mono L1
ENSG00000197442 MAP3K5 338923 sc-eQTL 4.71e-01 -0.0365 0.0506 0.517 Mono L1
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 9.64e-01 0.00242 0.0538 0.517 Mono L1
ENSG00000286646 AL121933.2 347355 sc-eQTL 8.08e-01 -0.0149 0.0613 0.517 Mono L1
ENSG00000027697 IFNGR1 -88049 sc-eQTL 3.81e-02 -0.119 0.0571 0.517 NK L1
ENSG00000029363 BCLAF1 841549 sc-eQTL 4.26e-01 -0.0244 0.0306 0.517 NK L1
ENSG00000112357 PEX7 308836 sc-eQTL 1.76e-01 0.12 0.0886 0.517 NK L1
ENSG00000112378 PERP -976019 sc-eQTL 9.54e-01 -0.00324 0.0561 0.517 NK L1
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 8.54e-01 0.00884 0.048 0.517 NK L1
ENSG00000197442 MAP3K5 338923 sc-eQTL 1.46e-02 0.167 0.0678 0.517 NK L1
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 1.42e-01 0.0997 0.0677 0.517 NK L1
ENSG00000027697 IFNGR1 -88049 sc-eQTL 1.72e-01 -0.0729 0.0532 0.517 Other_T L1
ENSG00000029363 BCLAF1 841549 sc-eQTL 3.08e-01 -0.0457 0.0447 0.517 Other_T L1
ENSG00000112357 PEX7 308836 sc-eQTL 4.01e-01 -0.0732 0.0869 0.517 Other_T L1
ENSG00000112378 PERP -976019 sc-eQTL 4.51e-01 0.0527 0.0698 0.517 Other_T L1
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 4.74e-01 0.0238 0.0332 0.517 Other_T L1
ENSG00000146410 MTFR2 881065 sc-eQTL 8.81e-01 -0.00757 0.0503 0.517 Other_T L1
ENSG00000197442 MAP3K5 338923 sc-eQTL 3.27e-02 0.136 0.0635 0.517 Other_T L1
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 2.21e-01 -0.0807 0.0657 0.517 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -88049 sc-eQTL 2.10e-01 -0.113 0.09 0.51 B_Activated L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 9.10e-01 -0.00834 0.0734 0.51 B_Activated L2
ENSG00000112357 PEX7 308836 sc-eQTL 1.18e-01 0.139 0.0883 0.51 B_Activated L2
ENSG00000112378 PERP -976019 sc-eQTL 6.50e-01 -0.0209 0.046 0.51 B_Activated L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 5.56e-01 0.0527 0.0892 0.51 B_Activated L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 6.14e-01 -0.0504 0.0999 0.51 B_Activated L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 3.59e-01 0.0715 0.0778 0.51 B_Activated L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 8.46e-01 -0.0156 0.0798 0.517 B_Intermediate L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 7.27e-01 0.0159 0.0454 0.517 B_Intermediate L2
ENSG00000112357 PEX7 308836 sc-eQTL 5.05e-02 0.163 0.0827 0.517 B_Intermediate L2
ENSG00000112378 PERP -976019 sc-eQTL 2.41e-02 -0.171 0.0752 0.517 B_Intermediate L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 7.65e-01 0.0179 0.0597 0.517 B_Intermediate L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 7.09e-01 0.0269 0.0721 0.517 B_Intermediate L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 4.41e-01 -0.0653 0.0846 0.517 B_Intermediate L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 8.73e-01 0.0139 0.0874 0.522 B_Memory L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 5.03e-03 0.144 0.0509 0.522 B_Memory L2
ENSG00000112357 PEX7 308836 sc-eQTL 6.09e-01 -0.0453 0.0882 0.522 B_Memory L2
ENSG00000112378 PERP -976019 sc-eQTL 3.54e-01 0.077 0.0829 0.522 B_Memory L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 5.58e-01 -0.0335 0.0571 0.522 B_Memory L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 9.99e-01 0.000129 0.0781 0.522 B_Memory L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 5.62e-01 0.0494 0.085 0.522 B_Memory L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 5.42e-01 -0.0422 0.0691 0.517 B_Naive1 L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 6.43e-01 -0.0184 0.0395 0.517 B_Naive1 L2
ENSG00000112357 PEX7 308836 sc-eQTL 1.53e-01 0.13 0.0909 0.517 B_Naive1 L2
ENSG00000112378 PERP -976019 sc-eQTL 5.36e-01 -0.0494 0.0798 0.517 B_Naive1 L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 3.92e-01 0.0396 0.0462 0.517 B_Naive1 L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 9.68e-01 -0.00259 0.0651 0.517 B_Naive1 L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 4.65e-01 -0.053 0.0724 0.517 B_Naive1 L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 7.75e-01 0.0239 0.0836 0.519 B_Naive2 L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 7.30e-01 0.0167 0.0484 0.519 B_Naive2 L2
ENSG00000112357 PEX7 308836 sc-eQTL 6.89e-01 0.0366 0.0914 0.519 B_Naive2 L2
ENSG00000112378 PERP -976019 sc-eQTL 5.63e-01 -0.0386 0.0666 0.519 B_Naive2 L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 3.37e-01 0.0639 0.0664 0.519 B_Naive2 L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 2.02e-01 -0.0904 0.0706 0.519 B_Naive2 L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 7.04e-01 -0.0328 0.086 0.519 B_Naive2 L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 9.55e-01 0.00442 0.0776 0.523 CD4_CTL L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 2.26e-02 0.156 0.0679 0.523 CD4_CTL L2
ENSG00000112357 PEX7 308836 sc-eQTL 6.52e-02 -0.158 0.0853 0.523 CD4_CTL L2
ENSG00000112378 PERP -976019 sc-eQTL 5.61e-01 0.0507 0.0871 0.523 CD4_CTL L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 3.53e-01 0.0472 0.0508 0.523 CD4_CTL L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 8.62e-02 0.139 0.0806 0.523 CD4_CTL L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 2.53e-01 -0.0905 0.0789 0.523 CD4_CTL L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 4.91e-02 -0.0833 0.0421 0.517 CD4_Naive L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 7.29e-01 0.0118 0.0341 0.517 CD4_Naive L2
ENSG00000112357 PEX7 308836 sc-eQTL 4.53e-01 0.0602 0.0801 0.517 CD4_Naive L2
ENSG00000112378 PERP -976019 sc-eQTL 9.25e-01 0.00622 0.0662 0.517 CD4_Naive L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 8.85e-01 -0.00673 0.0464 0.517 CD4_Naive L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 5.34e-01 -0.0212 0.0341 0.517 CD4_Naive L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 7.40e-01 -0.02 0.0601 0.517 CD4_Naive L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 6.44e-02 -0.108 0.0583 0.517 CD4_TCM L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 4.29e-01 0.0294 0.0371 0.517 CD4_TCM L2
ENSG00000112357 PEX7 308836 sc-eQTL 1.56e-01 0.122 0.0859 0.517 CD4_TCM L2
ENSG00000112378 PERP -976019 sc-eQTL 2.23e-01 -0.0889 0.0727 0.517 CD4_TCM L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 6.06e-01 0.0219 0.0423 0.517 CD4_TCM L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 5.64e-01 -0.0278 0.0482 0.517 CD4_TCM L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 9.69e-01 -0.00234 0.0594 0.517 CD4_TCM L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 1.13e-03 -0.216 0.0653 0.517 CD4_TEM L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 8.86e-01 0.00684 0.0475 0.517 CD4_TEM L2
ENSG00000112357 PEX7 308836 sc-eQTL 2.34e-01 -0.103 0.0862 0.517 CD4_TEM L2
ENSG00000112378 PERP -976019 sc-eQTL 8.17e-02 -0.122 0.0696 0.517 CD4_TEM L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 8.37e-01 0.00917 0.0445 0.517 CD4_TEM L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 5.16e-01 0.0447 0.0686 0.517 CD4_TEM L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 3.32e-01 -0.0692 0.0712 0.517 CD4_TEM L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 4.78e-01 -0.043 0.0604 0.517 CD8_CTL L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 2.56e-01 0.0458 0.0402 0.517 CD8_CTL L2
ENSG00000112357 PEX7 308836 sc-eQTL 8.03e-01 -0.0208 0.0832 0.517 CD8_CTL L2
ENSG00000112378 PERP -976019 sc-eQTL 1.58e-01 -0.113 0.0797 0.517 CD8_CTL L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 4.67e-01 0.037 0.0509 0.517 CD8_CTL L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 2.91e-01 0.0758 0.0717 0.517 CD8_CTL L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 9.05e-01 0.00855 0.0716 0.517 CD8_CTL L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 5.07e-02 -0.12 0.0608 0.517 CD8_Naive L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 7.47e-01 0.0138 0.0428 0.517 CD8_Naive L2
ENSG00000112357 PEX7 308836 sc-eQTL 5.00e-01 -0.06 0.0889 0.517 CD8_Naive L2
ENSG00000112378 PERP -976019 sc-eQTL 4.11e-01 -0.0556 0.0675 0.517 CD8_Naive L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 6.74e-01 0.0202 0.048 0.517 CD8_Naive L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 7.29e-01 0.0198 0.0569 0.517 CD8_Naive L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 7.16e-01 -0.0258 0.071 0.517 CD8_Naive L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 4.71e-01 -0.0592 0.082 0.521 CD8_TCM L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 3.20e-01 0.0613 0.0614 0.521 CD8_TCM L2
ENSG00000112357 PEX7 308836 sc-eQTL 3.28e-02 -0.2 0.0931 0.521 CD8_TCM L2
ENSG00000112378 PERP -976019 sc-eQTL 9.84e-02 -0.152 0.0916 0.521 CD8_TCM L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 9.48e-01 -0.00293 0.0445 0.521 CD8_TCM L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 3.97e-01 0.0673 0.0793 0.521 CD8_TCM L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 7.43e-01 -0.0267 0.0814 0.521 CD8_TCM L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 1.16e-01 -0.122 0.0773 0.516 CD8_TEM L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 5.46e-01 0.0444 0.0733 0.516 CD8_TEM L2
ENSG00000112357 PEX7 308836 sc-eQTL 5.89e-01 -0.0484 0.0894 0.516 CD8_TEM L2
ENSG00000112378 PERP -976019 sc-eQTL 1.83e-01 -0.124 0.0926 0.516 CD8_TEM L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 4.27e-01 0.0455 0.0572 0.516 CD8_TEM L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 6.51e-01 0.0402 0.0886 0.516 CD8_TEM L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 2.65e-01 -0.0948 0.0848 0.516 CD8_TEM L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 1.01e-01 -0.101 0.0615 0.522 MAIT L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 3.44e-01 -0.0487 0.0513 0.522 MAIT L2
ENSG00000112357 PEX7 308836 sc-eQTL 1.14e-01 -0.132 0.0834 0.522 MAIT L2
ENSG00000112378 PERP -976019 sc-eQTL 9.24e-01 0.00837 0.0875 0.522 MAIT L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 8.01e-01 0.0105 0.0416 0.522 MAIT L2
ENSG00000146410 MTFR2 881065 sc-eQTL 9.43e-01 -0.00494 0.0694 0.522 MAIT L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 3.80e-02 0.15 0.0718 0.522 MAIT L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 9.46e-01 -0.0052 0.077 0.522 MAIT L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 2.49e-01 -0.0789 0.0682 0.518 NK_CD56bright L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 5.80e-01 0.028 0.0505 0.518 NK_CD56bright L2
ENSG00000112357 PEX7 308836 sc-eQTL 7.53e-01 0.0281 0.0892 0.518 NK_CD56bright L2
ENSG00000112378 PERP -976019 sc-eQTL 1.82e-01 -0.107 0.0796 0.518 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 3.66e-01 0.0461 0.0509 0.518 NK_CD56bright L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 2.28e-01 0.0934 0.0772 0.518 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 3.78e-01 0.0717 0.0811 0.518 NK_CD56bright L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 7.39e-01 -0.0178 0.0534 0.519 NK_CD56dim L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 7.32e-01 -0.012 0.0349 0.519 NK_CD56dim L2
ENSG00000112357 PEX7 308836 sc-eQTL 8.68e-01 -0.0153 0.0921 0.519 NK_CD56dim L2
ENSG00000112378 PERP -976019 sc-eQTL 2.52e-01 0.0742 0.0645 0.519 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 4.72e-01 0.0362 0.0503 0.519 NK_CD56dim L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 3.38e-02 0.153 0.0717 0.519 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 9.01e-02 0.128 0.0749 0.519 NK_CD56dim L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 2.20e-03 -0.21 0.0678 0.516 NK_HLA L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 4.23e-01 -0.0472 0.0587 0.516 NK_HLA L2
ENSG00000112357 PEX7 308836 sc-eQTL 1.12e-01 0.14 0.0876 0.516 NK_HLA L2
ENSG00000112378 PERP -976019 sc-eQTL 2.57e-01 0.081 0.0713 0.516 NK_HLA L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 9.61e-01 -0.00272 0.055 0.516 NK_HLA L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 2.51e-02 0.195 0.0863 0.516 NK_HLA L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 1.90e-01 0.116 0.0883 0.516 NK_HLA L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 7.39e-03 -0.151 0.0559 0.519 NK_cytokine L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 2.75e-01 -0.0463 0.0423 0.519 NK_cytokine L2
ENSG00000112357 PEX7 308836 sc-eQTL 9.74e-02 0.148 0.0886 0.519 NK_cytokine L2
ENSG00000112378 PERP -976019 sc-eQTL 7.61e-01 -0.0206 0.0677 0.519 NK_cytokine L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 4.16e-01 0.0412 0.0507 0.519 NK_cytokine L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 7.10e-02 0.126 0.0692 0.519 NK_cytokine L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 4.04e-01 0.0638 0.0763 0.519 NK_cytokine L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 1.53e-01 -0.161 0.112 0.515 PB L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 8.14e-01 -0.023 0.0975 0.515 PB L2
ENSG00000112357 PEX7 308836 sc-eQTL 9.22e-01 0.0114 0.116 0.515 PB L2
ENSG00000112378 PERP -976019 sc-eQTL 3.98e-01 -0.0614 0.0722 0.515 PB L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 5.52e-01 0.0524 0.0878 0.515 PB L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 6.02e-02 -0.187 0.0985 0.515 PB L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 6.43e-01 0.049 0.105 0.515 PB L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 1.76e-01 -0.0957 0.0705 0.515 Pro_T L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 8.87e-01 0.0105 0.0734 0.515 Pro_T L2
ENSG00000112357 PEX7 308836 sc-eQTL 2.80e-01 0.0929 0.0858 0.515 Pro_T L2
ENSG00000112378 PERP -976019 sc-eQTL 3.14e-01 0.0688 0.0683 0.515 Pro_T L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 1.26e-01 0.0659 0.0429 0.515 Pro_T L2
ENSG00000146410 MTFR2 881065 sc-eQTL 3.88e-01 0.0517 0.0597 0.515 Pro_T L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 7.36e-01 -0.0283 0.0835 0.515 Pro_T L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 2.91e-02 -0.182 0.0828 0.515 Pro_T L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 2.84e-01 -0.0858 0.0799 0.517 Treg L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 3.31e-01 0.0504 0.0516 0.517 Treg L2
ENSG00000112357 PEX7 308836 sc-eQTL 5.27e-01 -0.0536 0.0846 0.517 Treg L2
ENSG00000112378 PERP -976019 sc-eQTL 1.93e-01 -0.119 0.0912 0.517 Treg L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 8.37e-01 0.0105 0.0509 0.517 Treg L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 6.60e-01 0.0243 0.0552 0.517 Treg L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 2.27e-01 0.0939 0.0774 0.517 Treg L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 6.76e-01 0.0292 0.0698 0.52 cDC L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 7.17e-01 0.0255 0.0703 0.52 cDC L2
ENSG00000112357 PEX7 308836 sc-eQTL 6.79e-01 0.0375 0.0903 0.52 cDC L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 7.84e-01 0.0189 0.0688 0.52 cDC L2
ENSG00000135525 MAP7 580581 sc-eQTL 9.09e-01 0.00924 0.0805 0.52 cDC L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 2.78e-01 0.0768 0.0706 0.52 cDC L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 6.07e-01 0.0462 0.0896 0.52 cDC L2
ENSG00000286646 AL121933.2 347355 sc-eQTL 6.48e-01 0.0422 0.0922 0.52 cDC L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 5.97e-02 -0.0901 0.0476 0.517 cMono_IL1B L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 5.37e-01 -0.0318 0.0514 0.517 cMono_IL1B L2
ENSG00000112357 PEX7 308836 sc-eQTL 3.15e-01 -0.0868 0.0861 0.517 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 5.56e-01 -0.0305 0.0516 0.517 cMono_IL1B L2
ENSG00000135525 MAP7 580581 sc-eQTL 6.06e-01 -0.0383 0.0743 0.517 cMono_IL1B L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 3.34e-01 -0.0519 0.0536 0.517 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 3.72e-01 0.0492 0.0551 0.517 cMono_IL1B L2
ENSG00000286646 AL121933.2 347355 sc-eQTL 4.30e-01 0.0546 0.069 0.517 cMono_IL1B L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 4.45e-02 -0.111 0.0551 0.517 cMono_S100A L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 6.54e-01 0.0257 0.0571 0.517 cMono_S100A L2
ENSG00000112357 PEX7 308836 sc-eQTL 5.01e-01 0.0601 0.0891 0.517 cMono_S100A L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 1.90e-01 -0.0647 0.0492 0.517 cMono_S100A L2
ENSG00000135525 MAP7 580581 sc-eQTL 4.78e-02 -0.164 0.0824 0.517 cMono_S100A L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 7.50e-01 -0.0214 0.0672 0.517 cMono_S100A L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 1.12e-01 -0.112 0.0705 0.517 cMono_S100A L2
ENSG00000286646 AL121933.2 347355 sc-eQTL 8.31e-01 -0.0148 0.0692 0.517 cMono_S100A L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 2.92e-01 -0.088 0.0832 0.524 gdT L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 6.09e-01 0.0377 0.0735 0.524 gdT L2
ENSG00000112357 PEX7 308836 sc-eQTL 9.00e-01 0.0134 0.106 0.524 gdT L2
ENSG00000112378 PERP -976019 sc-eQTL 5.74e-01 0.052 0.0923 0.524 gdT L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 1.96e-01 -0.0663 0.0511 0.524 gdT L2
ENSG00000146410 MTFR2 881065 sc-eQTL 4.07e-01 -0.0672 0.0808 0.524 gdT L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 2.61e-01 0.122 0.108 0.524 gdT L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 5.41e-01 -0.057 0.0929 0.524 gdT L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 8.34e-01 -0.0125 0.0596 0.52 intMono L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 7.34e-01 0.0267 0.0787 0.52 intMono L2
ENSG00000112357 PEX7 308836 sc-eQTL 5.14e-01 0.0525 0.0802 0.52 intMono L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 1.81e-01 -0.0687 0.0512 0.52 intMono L2
ENSG00000135525 MAP7 580581 sc-eQTL 6.24e-02 0.147 0.0784 0.52 intMono L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 9.78e-01 -0.00226 0.0837 0.52 intMono L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 9.76e-01 -0.00232 0.0767 0.52 intMono L2
ENSG00000286646 AL121933.2 347355 sc-eQTL 5.34e-01 -0.055 0.0883 0.52 intMono L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 3.91e-02 -0.148 0.0712 0.511 ncMono L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 3.41e-01 -0.0533 0.0558 0.511 ncMono L2
ENSG00000112357 PEX7 308836 sc-eQTL 5.22e-01 -0.0572 0.0891 0.511 ncMono L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 4.63e-01 -0.0468 0.0636 0.511 ncMono L2
ENSG00000135525 MAP7 580581 sc-eQTL 1.60e-02 0.189 0.0776 0.511 ncMono L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 8.99e-01 0.0105 0.0828 0.511 ncMono L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 4.92e-01 0.0548 0.0796 0.511 ncMono L2
ENSG00000286646 AL121933.2 347355 sc-eQTL 9.23e-01 0.00815 0.084 0.511 ncMono L2
ENSG00000027697 IFNGR1 -88049 sc-eQTL 6.70e-01 -0.0337 0.0789 0.514 pDC L2
ENSG00000029363 BCLAF1 841549 sc-eQTL 4.77e-01 0.0422 0.0591 0.514 pDC L2
ENSG00000112357 PEX7 308836 sc-eQTL 3.35e-01 0.0838 0.0866 0.514 pDC L2
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 8.18e-01 0.0169 0.0732 0.514 pDC L2
ENSG00000135525 MAP7 580581 sc-eQTL 6.81e-01 0.025 0.0606 0.514 pDC L2
ENSG00000197442 MAP3K5 338923 sc-eQTL 7.71e-01 -0.0284 0.0971 0.514 pDC L2
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 4.96e-01 0.0506 0.0741 0.514 pDC L2
ENSG00000286646 AL121933.2 347355 sc-eQTL 3.70e-02 -0.186 0.0883 0.514 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -88049 sc-eQTL 4.81e-01 -0.0502 0.0711 0.517 B_Memory LOneK1K
ENSG00000029363 BCLAF1 841549 sc-eQTL 3.34e-01 0.0386 0.0399 0.517 B_Memory LOneK1K
ENSG00000112357 PEX7 308836 sc-eQTL 2.63e-01 0.0917 0.0816 0.517 B_Memory LOneK1K
ENSG00000112378 PERP -976019 sc-eQTL 8.36e-01 -0.0157 0.076 0.517 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 3.79e-01 -0.0442 0.0501 0.517 B_Memory LOneK1K
ENSG00000197442 MAP3K5 338923 sc-eQTL 7.56e-01 0.0206 0.0665 0.517 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 8.92e-01 -0.0115 0.0849 0.517 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -88049 sc-eQTL 7.28e-01 -0.0253 0.0724 0.517 B_Naive LOneK1K
ENSG00000029363 BCLAF1 841549 sc-eQTL 7.79e-01 -0.00936 0.0333 0.517 B_Naive LOneK1K
ENSG00000112357 PEX7 308836 sc-eQTL 4.31e-01 0.0694 0.088 0.517 B_Naive LOneK1K
ENSG00000112378 PERP -976019 sc-eQTL 5.07e-01 -0.0524 0.0788 0.517 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 3.93e-01 0.0354 0.0414 0.517 B_Naive LOneK1K
ENSG00000197442 MAP3K5 338923 sc-eQTL 6.96e-01 -0.0238 0.0608 0.517 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 7.39e-01 -0.0246 0.0738 0.517 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -88049 sc-eQTL 3.13e-02 -0.103 0.0474 0.517 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 841549 sc-eQTL 9.64e-01 0.00202 0.0446 0.517 CD14_Mono LOneK1K
ENSG00000112357 PEX7 308836 sc-eQTL 5.81e-01 -0.0476 0.086 0.517 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 7.36e-01 -0.015 0.0443 0.517 CD14_Mono LOneK1K
ENSG00000135525 MAP7 580581 sc-eQTL 5.92e-02 -0.145 0.0763 0.517 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 338923 sc-eQTL 3.38e-01 -0.0498 0.0519 0.517 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 9.28e-01 0.00481 0.0531 0.517 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 347355 sc-eQTL 9.13e-01 0.00679 0.0618 0.517 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -88049 sc-eQTL 9.08e-02 -0.0975 0.0574 0.519 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 841549 sc-eQTL 5.17e-01 -0.0338 0.0522 0.519 CD16_Mono LOneK1K
ENSG00000112357 PEX7 308836 sc-eQTL 9.99e-01 -6.23e-05 0.0872 0.519 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 3.83e-01 -0.0471 0.0539 0.519 CD16_Mono LOneK1K
ENSG00000135525 MAP7 580581 sc-eQTL 1.67e-02 0.201 0.0832 0.519 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 338923 sc-eQTL 4.24e-01 0.0554 0.0691 0.519 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 9.87e-01 -0.00117 0.0724 0.519 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 347355 sc-eQTL 9.55e-01 -0.00467 0.0821 0.519 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -88049 sc-eQTL 1.20e-01 -0.0849 0.0543 0.519 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 841549 sc-eQTL 3.66e-01 -0.0287 0.0316 0.519 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 308836 sc-eQTL 2.83e-01 0.0989 0.0919 0.519 NK_CD56dim LOneK1K
ENSG00000112378 PERP -976019 sc-eQTL 5.12e-01 0.0375 0.0571 0.519 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -735814 sc-eQTL 9.41e-01 -0.00371 0.0498 0.519 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 338923 sc-eQTL 1.95e-02 0.156 0.0664 0.519 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -736833 sc-eQTL 9.52e-02 0.116 0.0692 0.519 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -88049 pQTL 0.000301 -0.0555 0.0153 0.0 0.0 0.48
ENSG00000027697 IFNGR1 -88049 eQTL 2.83e-10 -0.0833 0.0131 0.0 0.0 0.483
ENSG00000112357 PEX7 308836 eQTL 0.0177 0.0616 0.0259 0.0 0.0 0.483

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -88049 1.1e-05 1.99e-05 2.45e-06 9.48e-06 2.58e-06 5.49e-06 2.03e-05 2.41e-06 1.64e-05 7.35e-06 2.68e-05 8.05e-06 3.03e-05 5.48e-06 4.83e-06 7.79e-06 8.06e-06 1.12e-05 2.98e-06 2.84e-06 6.56e-06 1.35e-05 1.21e-05 3.29e-06 2.48e-05 4.34e-06 7.15e-06 5.22e-06 1.53e-05 1.1e-05 1.29e-05 9.88e-07 1.33e-06 3.49e-06 5.32e-06 2.84e-06 1.74e-06 1.96e-06 2.35e-06 1.2e-06 1.03e-06 3.54e-05 1.63e-06 1.47e-07 7.91e-07 2.56e-06 1.23e-06 7.66e-07 5.59e-07
ENSG00000112357 PEX7 308836 1.32e-06 2.44e-06 2.74e-07 1.88e-06 3.44e-07 6.36e-07 1.32e-06 3.51e-07 1.78e-06 7.41e-07 2.53e-06 8.93e-07 3.43e-06 8.78e-07 3.68e-07 9.07e-07 1.1e-06 9.53e-07 7.14e-07 6.91e-07 7.95e-07 1.88e-06 1.68e-06 4.44e-07 2.39e-06 7.53e-07 9.15e-07 9.43e-07 1.72e-06 1.46e-06 1.75e-06 4.75e-08 4.57e-08 6.61e-07 5.3e-07 4.82e-07 4.77e-07 1.16e-07 7.31e-07 3.98e-07 3.03e-07 4.34e-06 4.41e-08 1.82e-07 1.72e-07 3.13e-07 1.19e-07 7.19e-08 6.03e-08