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Genes within 1Mb (chr6:137131177:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -88272 sc-eQTL 2.80e-01 -0.0741 0.0684 0.517 B L1
ENSG00000029363 BCLAF1 841326 sc-eQTL 1.46e-01 0.0443 0.0304 0.517 B L1
ENSG00000112357 PEX7 308613 sc-eQTL 2.59e-01 0.0915 0.0809 0.517 B L1
ENSG00000112378 PERP -976242 sc-eQTL 8.60e-01 0.00949 0.0537 0.517 B L1
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 4.88e-01 0.03 0.0432 0.517 B L1
ENSG00000197442 MAP3K5 338700 sc-eQTL 3.45e-01 -0.057 0.0601 0.517 B L1
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 9.89e-01 -0.000928 0.068 0.517 B L1
ENSG00000027697 IFNGR1 -88272 sc-eQTL 1.13e-03 -0.143 0.0434 0.517 CD4T L1
ENSG00000029363 BCLAF1 841326 sc-eQTL 3.60e-01 0.0309 0.0337 0.517 CD4T L1
ENSG00000112357 PEX7 308613 sc-eQTL 7.78e-01 0.0202 0.0718 0.517 CD4T L1
ENSG00000112378 PERP -976242 sc-eQTL 4.61e-02 -0.0958 0.0477 0.517 CD4T L1
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 9.28e-01 -0.00411 0.0451 0.517 CD4T L1
ENSG00000197442 MAP3K5 338700 sc-eQTL 5.56e-01 -0.0203 0.0344 0.517 CD4T L1
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 8.42e-01 -0.0113 0.0568 0.517 CD4T L1
ENSG00000027697 IFNGR1 -88272 sc-eQTL 1.07e-01 -0.0822 0.0507 0.517 CD8T L1
ENSG00000029363 BCLAF1 841326 sc-eQTL 7.31e-01 0.0119 0.0345 0.517 CD8T L1
ENSG00000112357 PEX7 308613 sc-eQTL 5.19e-02 -0.165 0.0844 0.517 CD8T L1
ENSG00000112378 PERP -976242 sc-eQTL 6.25e-02 -0.103 0.0552 0.517 CD8T L1
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 4.71e-01 0.031 0.0429 0.517 CD8T L1
ENSG00000197442 MAP3K5 338700 sc-eQTL 3.44e-01 0.043 0.0453 0.517 CD8T L1
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 7.32e-01 0.0216 0.0631 0.517 CD8T L1
ENSG00000027697 IFNGR1 -88272 sc-eQTL 6.56e-01 0.0279 0.0626 0.516 DC L1
ENSG00000029363 BCLAF1 841326 sc-eQTL 7.24e-01 -0.02 0.0563 0.516 DC L1
ENSG00000112357 PEX7 308613 sc-eQTL 9.11e-01 0.00989 0.0882 0.516 DC L1
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 6.76e-01 0.028 0.0669 0.516 DC L1
ENSG00000135525 MAP7 580358 sc-eQTL 5.12e-01 -0.0475 0.0724 0.516 DC L1
ENSG00000197442 MAP3K5 338700 sc-eQTL 2.55e-01 0.079 0.0692 0.516 DC L1
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 7.55e-01 0.0213 0.0682 0.516 DC L1
ENSG00000286646 AL121933.2 347132 sc-eQTL 6.27e-01 -0.0441 0.0906 0.516 DC L1
ENSG00000027697 IFNGR1 -88272 sc-eQTL 3.11e-02 -0.11 0.0506 0.517 Mono L1
ENSG00000029363 BCLAF1 841326 sc-eQTL 5.67e-01 0.0251 0.0437 0.517 Mono L1
ENSG00000112357 PEX7 308613 sc-eQTL 7.63e-01 -0.026 0.0861 0.517 Mono L1
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 9.48e-01 -0.00286 0.0434 0.517 Mono L1
ENSG00000135525 MAP7 580358 sc-eQTL 5.45e-01 -0.046 0.0759 0.517 Mono L1
ENSG00000197442 MAP3K5 338700 sc-eQTL 4.71e-01 -0.0365 0.0506 0.517 Mono L1
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 9.64e-01 0.00242 0.0538 0.517 Mono L1
ENSG00000286646 AL121933.2 347132 sc-eQTL 8.08e-01 -0.0149 0.0613 0.517 Mono L1
ENSG00000027697 IFNGR1 -88272 sc-eQTL 3.81e-02 -0.119 0.0571 0.517 NK L1
ENSG00000029363 BCLAF1 841326 sc-eQTL 4.26e-01 -0.0244 0.0306 0.517 NK L1
ENSG00000112357 PEX7 308613 sc-eQTL 1.76e-01 0.12 0.0886 0.517 NK L1
ENSG00000112378 PERP -976242 sc-eQTL 9.54e-01 -0.00324 0.0561 0.517 NK L1
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 8.54e-01 0.00884 0.048 0.517 NK L1
ENSG00000197442 MAP3K5 338700 sc-eQTL 1.46e-02 0.167 0.0678 0.517 NK L1
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 1.42e-01 0.0997 0.0677 0.517 NK L1
ENSG00000027697 IFNGR1 -88272 sc-eQTL 1.72e-01 -0.0729 0.0532 0.517 Other_T L1
ENSG00000029363 BCLAF1 841326 sc-eQTL 3.08e-01 -0.0457 0.0447 0.517 Other_T L1
ENSG00000112357 PEX7 308613 sc-eQTL 4.01e-01 -0.0732 0.0869 0.517 Other_T L1
ENSG00000112378 PERP -976242 sc-eQTL 4.51e-01 0.0527 0.0698 0.517 Other_T L1
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 4.74e-01 0.0238 0.0332 0.517 Other_T L1
ENSG00000146410 MTFR2 880842 sc-eQTL 8.81e-01 -0.00757 0.0503 0.517 Other_T L1
ENSG00000197442 MAP3K5 338700 sc-eQTL 3.27e-02 0.136 0.0635 0.517 Other_T L1
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 2.21e-01 -0.0807 0.0657 0.517 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -88272 sc-eQTL 2.10e-01 -0.113 0.09 0.51 B_Activated L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 9.10e-01 -0.00834 0.0734 0.51 B_Activated L2
ENSG00000112357 PEX7 308613 sc-eQTL 1.18e-01 0.139 0.0883 0.51 B_Activated L2
ENSG00000112378 PERP -976242 sc-eQTL 6.50e-01 -0.0209 0.046 0.51 B_Activated L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 5.56e-01 0.0527 0.0892 0.51 B_Activated L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 6.14e-01 -0.0504 0.0999 0.51 B_Activated L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 3.59e-01 0.0715 0.0778 0.51 B_Activated L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 8.46e-01 -0.0156 0.0798 0.517 B_Intermediate L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 7.27e-01 0.0159 0.0454 0.517 B_Intermediate L2
ENSG00000112357 PEX7 308613 sc-eQTL 5.05e-02 0.163 0.0827 0.517 B_Intermediate L2
ENSG00000112378 PERP -976242 sc-eQTL 2.41e-02 -0.171 0.0752 0.517 B_Intermediate L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 7.65e-01 0.0179 0.0597 0.517 B_Intermediate L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 7.09e-01 0.0269 0.0721 0.517 B_Intermediate L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 4.41e-01 -0.0653 0.0846 0.517 B_Intermediate L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 8.73e-01 0.0139 0.0874 0.522 B_Memory L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 5.03e-03 0.144 0.0509 0.522 B_Memory L2
ENSG00000112357 PEX7 308613 sc-eQTL 6.09e-01 -0.0453 0.0882 0.522 B_Memory L2
ENSG00000112378 PERP -976242 sc-eQTL 3.54e-01 0.077 0.0829 0.522 B_Memory L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 5.58e-01 -0.0335 0.0571 0.522 B_Memory L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 9.99e-01 0.000129 0.0781 0.522 B_Memory L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 5.62e-01 0.0494 0.085 0.522 B_Memory L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 5.42e-01 -0.0422 0.0691 0.517 B_Naive1 L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 6.43e-01 -0.0184 0.0395 0.517 B_Naive1 L2
ENSG00000112357 PEX7 308613 sc-eQTL 1.53e-01 0.13 0.0909 0.517 B_Naive1 L2
ENSG00000112378 PERP -976242 sc-eQTL 5.36e-01 -0.0494 0.0798 0.517 B_Naive1 L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 3.92e-01 0.0396 0.0462 0.517 B_Naive1 L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 9.68e-01 -0.00259 0.0651 0.517 B_Naive1 L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 4.65e-01 -0.053 0.0724 0.517 B_Naive1 L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 7.75e-01 0.0239 0.0836 0.519 B_Naive2 L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 7.30e-01 0.0167 0.0484 0.519 B_Naive2 L2
ENSG00000112357 PEX7 308613 sc-eQTL 6.89e-01 0.0366 0.0914 0.519 B_Naive2 L2
ENSG00000112378 PERP -976242 sc-eQTL 5.63e-01 -0.0386 0.0666 0.519 B_Naive2 L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 3.37e-01 0.0639 0.0664 0.519 B_Naive2 L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 2.02e-01 -0.0904 0.0706 0.519 B_Naive2 L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 7.04e-01 -0.0328 0.086 0.519 B_Naive2 L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 9.55e-01 0.00442 0.0776 0.523 CD4_CTL L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 2.26e-02 0.156 0.0679 0.523 CD4_CTL L2
ENSG00000112357 PEX7 308613 sc-eQTL 6.52e-02 -0.158 0.0853 0.523 CD4_CTL L2
ENSG00000112378 PERP -976242 sc-eQTL 5.61e-01 0.0507 0.0871 0.523 CD4_CTL L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 3.53e-01 0.0472 0.0508 0.523 CD4_CTL L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 8.62e-02 0.139 0.0806 0.523 CD4_CTL L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 2.53e-01 -0.0905 0.0789 0.523 CD4_CTL L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 4.91e-02 -0.0833 0.0421 0.517 CD4_Naive L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 7.29e-01 0.0118 0.0341 0.517 CD4_Naive L2
ENSG00000112357 PEX7 308613 sc-eQTL 4.53e-01 0.0602 0.0801 0.517 CD4_Naive L2
ENSG00000112378 PERP -976242 sc-eQTL 9.25e-01 0.00622 0.0662 0.517 CD4_Naive L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 8.85e-01 -0.00673 0.0464 0.517 CD4_Naive L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 5.34e-01 -0.0212 0.0341 0.517 CD4_Naive L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 7.40e-01 -0.02 0.0601 0.517 CD4_Naive L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 6.44e-02 -0.108 0.0583 0.517 CD4_TCM L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 4.29e-01 0.0294 0.0371 0.517 CD4_TCM L2
ENSG00000112357 PEX7 308613 sc-eQTL 1.56e-01 0.122 0.0859 0.517 CD4_TCM L2
ENSG00000112378 PERP -976242 sc-eQTL 2.23e-01 -0.0889 0.0727 0.517 CD4_TCM L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 6.06e-01 0.0219 0.0423 0.517 CD4_TCM L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 5.64e-01 -0.0278 0.0482 0.517 CD4_TCM L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 9.69e-01 -0.00234 0.0594 0.517 CD4_TCM L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 1.13e-03 -0.216 0.0653 0.517 CD4_TEM L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 8.86e-01 0.00684 0.0475 0.517 CD4_TEM L2
ENSG00000112357 PEX7 308613 sc-eQTL 2.34e-01 -0.103 0.0862 0.517 CD4_TEM L2
ENSG00000112378 PERP -976242 sc-eQTL 8.17e-02 -0.122 0.0696 0.517 CD4_TEM L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 8.37e-01 0.00917 0.0445 0.517 CD4_TEM L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 5.16e-01 0.0447 0.0686 0.517 CD4_TEM L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 3.32e-01 -0.0692 0.0712 0.517 CD4_TEM L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 4.78e-01 -0.043 0.0604 0.517 CD8_CTL L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 2.56e-01 0.0458 0.0402 0.517 CD8_CTL L2
ENSG00000112357 PEX7 308613 sc-eQTL 8.03e-01 -0.0208 0.0832 0.517 CD8_CTL L2
ENSG00000112378 PERP -976242 sc-eQTL 1.58e-01 -0.113 0.0797 0.517 CD8_CTL L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 4.67e-01 0.037 0.0509 0.517 CD8_CTL L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 2.91e-01 0.0758 0.0717 0.517 CD8_CTL L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 9.05e-01 0.00855 0.0716 0.517 CD8_CTL L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 5.07e-02 -0.12 0.0608 0.517 CD8_Naive L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 7.47e-01 0.0138 0.0428 0.517 CD8_Naive L2
ENSG00000112357 PEX7 308613 sc-eQTL 5.00e-01 -0.06 0.0889 0.517 CD8_Naive L2
ENSG00000112378 PERP -976242 sc-eQTL 4.11e-01 -0.0556 0.0675 0.517 CD8_Naive L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 6.74e-01 0.0202 0.048 0.517 CD8_Naive L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 7.29e-01 0.0198 0.0569 0.517 CD8_Naive L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 7.16e-01 -0.0258 0.071 0.517 CD8_Naive L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 4.71e-01 -0.0592 0.082 0.521 CD8_TCM L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 3.20e-01 0.0613 0.0614 0.521 CD8_TCM L2
ENSG00000112357 PEX7 308613 sc-eQTL 3.28e-02 -0.2 0.0931 0.521 CD8_TCM L2
ENSG00000112378 PERP -976242 sc-eQTL 9.84e-02 -0.152 0.0916 0.521 CD8_TCM L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 9.48e-01 -0.00293 0.0445 0.521 CD8_TCM L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 3.97e-01 0.0673 0.0793 0.521 CD8_TCM L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 7.43e-01 -0.0267 0.0814 0.521 CD8_TCM L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 1.16e-01 -0.122 0.0773 0.516 CD8_TEM L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 5.46e-01 0.0444 0.0733 0.516 CD8_TEM L2
ENSG00000112357 PEX7 308613 sc-eQTL 5.89e-01 -0.0484 0.0894 0.516 CD8_TEM L2
ENSG00000112378 PERP -976242 sc-eQTL 1.83e-01 -0.124 0.0926 0.516 CD8_TEM L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 4.27e-01 0.0455 0.0572 0.516 CD8_TEM L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 6.51e-01 0.0402 0.0886 0.516 CD8_TEM L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 2.65e-01 -0.0948 0.0848 0.516 CD8_TEM L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 1.01e-01 -0.101 0.0615 0.522 MAIT L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 3.44e-01 -0.0487 0.0513 0.522 MAIT L2
ENSG00000112357 PEX7 308613 sc-eQTL 1.14e-01 -0.132 0.0834 0.522 MAIT L2
ENSG00000112378 PERP -976242 sc-eQTL 9.24e-01 0.00837 0.0875 0.522 MAIT L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 8.01e-01 0.0105 0.0416 0.522 MAIT L2
ENSG00000146410 MTFR2 880842 sc-eQTL 9.43e-01 -0.00494 0.0694 0.522 MAIT L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 3.80e-02 0.15 0.0718 0.522 MAIT L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 9.46e-01 -0.0052 0.077 0.522 MAIT L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 2.49e-01 -0.0789 0.0682 0.518 NK_CD56bright L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 5.80e-01 0.028 0.0505 0.518 NK_CD56bright L2
ENSG00000112357 PEX7 308613 sc-eQTL 7.53e-01 0.0281 0.0892 0.518 NK_CD56bright L2
ENSG00000112378 PERP -976242 sc-eQTL 1.82e-01 -0.107 0.0796 0.518 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 3.66e-01 0.0461 0.0509 0.518 NK_CD56bright L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 2.28e-01 0.0934 0.0772 0.518 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 3.78e-01 0.0717 0.0811 0.518 NK_CD56bright L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 7.39e-01 -0.0178 0.0534 0.519 NK_CD56dim L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 7.32e-01 -0.012 0.0349 0.519 NK_CD56dim L2
ENSG00000112357 PEX7 308613 sc-eQTL 8.68e-01 -0.0153 0.0921 0.519 NK_CD56dim L2
ENSG00000112378 PERP -976242 sc-eQTL 2.52e-01 0.0742 0.0645 0.519 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 4.72e-01 0.0362 0.0503 0.519 NK_CD56dim L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 3.38e-02 0.153 0.0717 0.519 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 9.01e-02 0.128 0.0749 0.519 NK_CD56dim L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 2.20e-03 -0.21 0.0678 0.516 NK_HLA L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 4.23e-01 -0.0472 0.0587 0.516 NK_HLA L2
ENSG00000112357 PEX7 308613 sc-eQTL 1.12e-01 0.14 0.0876 0.516 NK_HLA L2
ENSG00000112378 PERP -976242 sc-eQTL 2.57e-01 0.081 0.0713 0.516 NK_HLA L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 9.61e-01 -0.00272 0.055 0.516 NK_HLA L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 2.51e-02 0.195 0.0863 0.516 NK_HLA L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 1.90e-01 0.116 0.0883 0.516 NK_HLA L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 7.39e-03 -0.151 0.0559 0.519 NK_cytokine L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 2.75e-01 -0.0463 0.0423 0.519 NK_cytokine L2
ENSG00000112357 PEX7 308613 sc-eQTL 9.74e-02 0.148 0.0886 0.519 NK_cytokine L2
ENSG00000112378 PERP -976242 sc-eQTL 7.61e-01 -0.0206 0.0677 0.519 NK_cytokine L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 4.16e-01 0.0412 0.0507 0.519 NK_cytokine L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 7.10e-02 0.126 0.0692 0.519 NK_cytokine L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 4.04e-01 0.0638 0.0763 0.519 NK_cytokine L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 1.53e-01 -0.161 0.112 0.515 PB L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 8.14e-01 -0.023 0.0975 0.515 PB L2
ENSG00000112357 PEX7 308613 sc-eQTL 9.22e-01 0.0114 0.116 0.515 PB L2
ENSG00000112378 PERP -976242 sc-eQTL 3.98e-01 -0.0614 0.0722 0.515 PB L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 5.52e-01 0.0524 0.0878 0.515 PB L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 6.02e-02 -0.187 0.0985 0.515 PB L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 6.43e-01 0.049 0.105 0.515 PB L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 1.76e-01 -0.0957 0.0705 0.515 Pro_T L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 8.87e-01 0.0105 0.0734 0.515 Pro_T L2
ENSG00000112357 PEX7 308613 sc-eQTL 2.80e-01 0.0929 0.0858 0.515 Pro_T L2
ENSG00000112378 PERP -976242 sc-eQTL 3.14e-01 0.0688 0.0683 0.515 Pro_T L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 1.26e-01 0.0659 0.0429 0.515 Pro_T L2
ENSG00000146410 MTFR2 880842 sc-eQTL 3.88e-01 0.0517 0.0597 0.515 Pro_T L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 7.36e-01 -0.0283 0.0835 0.515 Pro_T L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 2.91e-02 -0.182 0.0828 0.515 Pro_T L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 2.84e-01 -0.0858 0.0799 0.517 Treg L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 3.31e-01 0.0504 0.0516 0.517 Treg L2
ENSG00000112357 PEX7 308613 sc-eQTL 5.27e-01 -0.0536 0.0846 0.517 Treg L2
ENSG00000112378 PERP -976242 sc-eQTL 1.93e-01 -0.119 0.0912 0.517 Treg L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 8.37e-01 0.0105 0.0509 0.517 Treg L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 6.60e-01 0.0243 0.0552 0.517 Treg L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 2.27e-01 0.0939 0.0774 0.517 Treg L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 6.76e-01 0.0292 0.0698 0.52 cDC L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 7.17e-01 0.0255 0.0703 0.52 cDC L2
ENSG00000112357 PEX7 308613 sc-eQTL 6.79e-01 0.0375 0.0903 0.52 cDC L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 7.84e-01 0.0189 0.0688 0.52 cDC L2
ENSG00000135525 MAP7 580358 sc-eQTL 9.09e-01 0.00924 0.0805 0.52 cDC L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 2.78e-01 0.0768 0.0706 0.52 cDC L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 6.07e-01 0.0462 0.0896 0.52 cDC L2
ENSG00000286646 AL121933.2 347132 sc-eQTL 6.48e-01 0.0422 0.0922 0.52 cDC L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 5.97e-02 -0.0901 0.0476 0.517 cMono_IL1B L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 5.37e-01 -0.0318 0.0514 0.517 cMono_IL1B L2
ENSG00000112357 PEX7 308613 sc-eQTL 3.15e-01 -0.0868 0.0861 0.517 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 5.56e-01 -0.0305 0.0516 0.517 cMono_IL1B L2
ENSG00000135525 MAP7 580358 sc-eQTL 6.06e-01 -0.0383 0.0743 0.517 cMono_IL1B L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 3.34e-01 -0.0519 0.0536 0.517 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 3.72e-01 0.0492 0.0551 0.517 cMono_IL1B L2
ENSG00000286646 AL121933.2 347132 sc-eQTL 4.30e-01 0.0546 0.069 0.517 cMono_IL1B L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 4.45e-02 -0.111 0.0551 0.517 cMono_S100A L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 6.54e-01 0.0257 0.0571 0.517 cMono_S100A L2
ENSG00000112357 PEX7 308613 sc-eQTL 5.01e-01 0.0601 0.0891 0.517 cMono_S100A L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 1.90e-01 -0.0647 0.0492 0.517 cMono_S100A L2
ENSG00000135525 MAP7 580358 sc-eQTL 4.78e-02 -0.164 0.0824 0.517 cMono_S100A L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 7.50e-01 -0.0214 0.0672 0.517 cMono_S100A L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 1.12e-01 -0.112 0.0705 0.517 cMono_S100A L2
ENSG00000286646 AL121933.2 347132 sc-eQTL 8.31e-01 -0.0148 0.0692 0.517 cMono_S100A L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 2.92e-01 -0.088 0.0832 0.524 gdT L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 6.09e-01 0.0377 0.0735 0.524 gdT L2
ENSG00000112357 PEX7 308613 sc-eQTL 9.00e-01 0.0134 0.106 0.524 gdT L2
ENSG00000112378 PERP -976242 sc-eQTL 5.74e-01 0.052 0.0923 0.524 gdT L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 1.96e-01 -0.0663 0.0511 0.524 gdT L2
ENSG00000146410 MTFR2 880842 sc-eQTL 4.07e-01 -0.0672 0.0808 0.524 gdT L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 2.61e-01 0.122 0.108 0.524 gdT L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 5.41e-01 -0.057 0.0929 0.524 gdT L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 8.34e-01 -0.0125 0.0596 0.52 intMono L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 7.34e-01 0.0267 0.0787 0.52 intMono L2
ENSG00000112357 PEX7 308613 sc-eQTL 5.14e-01 0.0525 0.0802 0.52 intMono L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 1.81e-01 -0.0687 0.0512 0.52 intMono L2
ENSG00000135525 MAP7 580358 sc-eQTL 6.24e-02 0.147 0.0784 0.52 intMono L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 9.78e-01 -0.00226 0.0837 0.52 intMono L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 9.76e-01 -0.00232 0.0767 0.52 intMono L2
ENSG00000286646 AL121933.2 347132 sc-eQTL 5.34e-01 -0.055 0.0883 0.52 intMono L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 3.91e-02 -0.148 0.0712 0.511 ncMono L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 3.41e-01 -0.0533 0.0558 0.511 ncMono L2
ENSG00000112357 PEX7 308613 sc-eQTL 5.22e-01 -0.0572 0.0891 0.511 ncMono L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 4.63e-01 -0.0468 0.0636 0.511 ncMono L2
ENSG00000135525 MAP7 580358 sc-eQTL 1.60e-02 0.189 0.0776 0.511 ncMono L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 8.99e-01 0.0105 0.0828 0.511 ncMono L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 4.92e-01 0.0548 0.0796 0.511 ncMono L2
ENSG00000286646 AL121933.2 347132 sc-eQTL 9.23e-01 0.00815 0.084 0.511 ncMono L2
ENSG00000027697 IFNGR1 -88272 sc-eQTL 6.70e-01 -0.0337 0.0789 0.514 pDC L2
ENSG00000029363 BCLAF1 841326 sc-eQTL 4.77e-01 0.0422 0.0591 0.514 pDC L2
ENSG00000112357 PEX7 308613 sc-eQTL 3.35e-01 0.0838 0.0866 0.514 pDC L2
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 8.18e-01 0.0169 0.0732 0.514 pDC L2
ENSG00000135525 MAP7 580358 sc-eQTL 6.81e-01 0.025 0.0606 0.514 pDC L2
ENSG00000197442 MAP3K5 338700 sc-eQTL 7.71e-01 -0.0284 0.0971 0.514 pDC L2
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 4.96e-01 0.0506 0.0741 0.514 pDC L2
ENSG00000286646 AL121933.2 347132 sc-eQTL 3.70e-02 -0.186 0.0883 0.514 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -88272 sc-eQTL 4.81e-01 -0.0502 0.0711 0.517 B_Memory LOneK1K
ENSG00000029363 BCLAF1 841326 sc-eQTL 3.34e-01 0.0386 0.0399 0.517 B_Memory LOneK1K
ENSG00000112357 PEX7 308613 sc-eQTL 2.63e-01 0.0917 0.0816 0.517 B_Memory LOneK1K
ENSG00000112378 PERP -976242 sc-eQTL 8.36e-01 -0.0157 0.076 0.517 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 3.79e-01 -0.0442 0.0501 0.517 B_Memory LOneK1K
ENSG00000197442 MAP3K5 338700 sc-eQTL 7.56e-01 0.0206 0.0665 0.517 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 8.92e-01 -0.0115 0.0849 0.517 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -88272 sc-eQTL 7.28e-01 -0.0253 0.0724 0.517 B_Naive LOneK1K
ENSG00000029363 BCLAF1 841326 sc-eQTL 7.79e-01 -0.00936 0.0333 0.517 B_Naive LOneK1K
ENSG00000112357 PEX7 308613 sc-eQTL 4.31e-01 0.0694 0.088 0.517 B_Naive LOneK1K
ENSG00000112378 PERP -976242 sc-eQTL 5.07e-01 -0.0524 0.0788 0.517 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 3.93e-01 0.0354 0.0414 0.517 B_Naive LOneK1K
ENSG00000197442 MAP3K5 338700 sc-eQTL 6.96e-01 -0.0238 0.0608 0.517 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 7.39e-01 -0.0246 0.0738 0.517 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -88272 sc-eQTL 3.13e-02 -0.103 0.0474 0.517 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 841326 sc-eQTL 9.64e-01 0.00202 0.0446 0.517 CD14_Mono LOneK1K
ENSG00000112357 PEX7 308613 sc-eQTL 5.81e-01 -0.0476 0.086 0.517 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 7.36e-01 -0.015 0.0443 0.517 CD14_Mono LOneK1K
ENSG00000135525 MAP7 580358 sc-eQTL 5.92e-02 -0.145 0.0763 0.517 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 338700 sc-eQTL 3.38e-01 -0.0498 0.0519 0.517 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 9.28e-01 0.00481 0.0531 0.517 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 347132 sc-eQTL 9.13e-01 0.00679 0.0618 0.517 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -88272 sc-eQTL 9.08e-02 -0.0975 0.0574 0.519 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 841326 sc-eQTL 5.17e-01 -0.0338 0.0522 0.519 CD16_Mono LOneK1K
ENSG00000112357 PEX7 308613 sc-eQTL 9.99e-01 -6.23e-05 0.0872 0.519 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 3.83e-01 -0.0471 0.0539 0.519 CD16_Mono LOneK1K
ENSG00000135525 MAP7 580358 sc-eQTL 1.67e-02 0.201 0.0832 0.519 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 338700 sc-eQTL 4.24e-01 0.0554 0.0691 0.519 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 9.87e-01 -0.00117 0.0724 0.519 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 347132 sc-eQTL 9.55e-01 -0.00467 0.0821 0.519 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -88272 sc-eQTL 1.20e-01 -0.0849 0.0543 0.519 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 841326 sc-eQTL 3.66e-01 -0.0287 0.0316 0.519 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 308613 sc-eQTL 2.83e-01 0.0989 0.0919 0.519 NK_CD56dim LOneK1K
ENSG00000112378 PERP -976242 sc-eQTL 5.12e-01 0.0375 0.0571 0.519 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -736037 sc-eQTL 9.41e-01 -0.00371 0.0498 0.519 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 338700 sc-eQTL 1.95e-02 0.156 0.0664 0.519 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -737056 sc-eQTL 9.52e-02 0.116 0.0692 0.519 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -88272 pQTL 0.000323 -0.0552 0.0153 0.0 0.0 0.48
ENSG00000027697 IFNGR1 -88272 eQTL 2.95e-10 -0.0832 0.0131 0.0 0.0 0.483
ENSG00000112357 PEX7 308613 eQTL 0.018 0.0614 0.0259 0.0 0.0 0.483

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -88272 5.62e-06 5.83e-06 7.79e-07 3.47e-06 1.74e-06 1.81e-06 8.08e-06 1.19e-06 4.62e-06 3.17e-06 7.76e-06 2.95e-06 9.86e-06 2.15e-06 9.59e-07 4.41e-06 2.78e-06 3.86e-06 1.65e-06 1.71e-06 2.89e-06 6.41e-06 4.96e-06 1.91e-06 9.17e-06 2.21e-06 3.08e-06 1.71e-06 6.27e-06 6.97e-06 3.25e-06 4.81e-07 8.25e-07 2.61e-06 2.1e-06 1.78e-06 1.24e-06 9.08e-07 1.41e-06 7.43e-07 8.99e-07 8.12e-06 6.72e-07 1.79e-07 7.65e-07 9.83e-07 1.07e-06 6.6e-07 6.22e-07
ENSG00000112357 PEX7 308613 1.32e-06 9.55e-07 3.58e-07 7.39e-07 3.4e-07 4.76e-07 1.24e-06 3.51e-07 1.35e-06 4.24e-07 1.38e-06 6.03e-07 1.96e-06 2.83e-07 4.95e-07 8.25e-07 7.93e-07 6.13e-07 6.68e-07 7.04e-07 4.99e-07 1.24e-06 9.21e-07 6.37e-07 2.05e-06 4.32e-07 7.6e-07 7.2e-07 1.25e-06 1.25e-06 5.91e-07 1.59e-07 2.24e-07 6.35e-07 5.36e-07 4.81e-07 4.73e-07 2.04e-07 3.48e-07 1.3e-07 2.59e-07 1.62e-06 5.89e-08 5.7e-08 1.66e-07 1.26e-07 2.14e-07 8.37e-08 1.23e-07