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Genes within 1Mb (chr6:137123386:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -96063 sc-eQTL 3.68e-01 -0.0634 0.0702 0.479 B L1
ENSG00000029363 BCLAF1 833535 sc-eQTL 2.97e-01 0.0326 0.0312 0.479 B L1
ENSG00000112357 PEX7 300822 sc-eQTL 3.70e-01 0.0747 0.0831 0.479 B L1
ENSG00000112378 PERP -984033 sc-eQTL 5.66e-01 0.0317 0.0551 0.479 B L1
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 6.35e-01 0.0211 0.0444 0.479 B L1
ENSG00000197442 MAP3K5 330909 sc-eQTL 2.18e-01 -0.0761 0.0617 0.479 B L1
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 5.93e-01 -0.0373 0.0698 0.479 B L1
ENSG00000027697 IFNGR1 -96063 sc-eQTL 3.40e-03 -0.133 0.0448 0.479 CD4T L1
ENSG00000029363 BCLAF1 833535 sc-eQTL 8.45e-01 0.00676 0.0346 0.479 CD4T L1
ENSG00000112357 PEX7 300822 sc-eQTL 8.49e-01 0.014 0.0737 0.479 CD4T L1
ENSG00000112378 PERP -984033 sc-eQTL 1.57e-01 -0.07 0.0492 0.479 CD4T L1
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 8.88e-01 0.00652 0.0464 0.479 CD4T L1
ENSG00000197442 MAP3K5 330909 sc-eQTL 6.65e-01 -0.0153 0.0353 0.479 CD4T L1
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 4.71e-01 -0.042 0.0583 0.479 CD4T L1
ENSG00000027697 IFNGR1 -96063 sc-eQTL 3.37e-01 -0.0502 0.0522 0.479 CD8T L1
ENSG00000029363 BCLAF1 833535 sc-eQTL 4.80e-01 -0.025 0.0354 0.479 CD8T L1
ENSG00000112357 PEX7 300822 sc-eQTL 8.27e-02 -0.151 0.0867 0.479 CD8T L1
ENSG00000112378 PERP -984033 sc-eQTL 2.62e-01 -0.0641 0.0569 0.479 CD8T L1
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 3.47e-01 0.0415 0.044 0.479 CD8T L1
ENSG00000197442 MAP3K5 330909 sc-eQTL 4.26e-01 0.0371 0.0465 0.479 CD8T L1
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 3.65e-01 0.0586 0.0646 0.479 CD8T L1
ENSG00000027697 IFNGR1 -96063 sc-eQTL 9.71e-01 0.00235 0.0645 0.477 DC L1
ENSG00000029363 BCLAF1 833535 sc-eQTL 8.14e-01 -0.0137 0.058 0.477 DC L1
ENSG00000112357 PEX7 300822 sc-eQTL 6.48e-01 0.0414 0.0907 0.477 DC L1
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 7.63e-01 0.0208 0.0689 0.477 DC L1
ENSG00000135525 MAP7 572567 sc-eQTL 9.31e-01 0.00648 0.0746 0.477 DC L1
ENSG00000197442 MAP3K5 330909 sc-eQTL 3.69e-01 0.0642 0.0713 0.477 DC L1
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 6.20e-01 0.0348 0.0702 0.477 DC L1
ENSG00000286646 AL121933.2 339341 sc-eQTL 9.54e-01 -0.0054 0.0933 0.477 DC L1
ENSG00000027697 IFNGR1 -96063 sc-eQTL 4.94e-02 -0.103 0.0522 0.479 Mono L1
ENSG00000029363 BCLAF1 833535 sc-eQTL 3.90e-01 0.0387 0.0449 0.479 Mono L1
ENSG00000112357 PEX7 300822 sc-eQTL 3.30e-01 -0.0863 0.0884 0.479 Mono L1
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 9.80e-01 -0.00114 0.0447 0.479 Mono L1
ENSG00000135525 MAP7 572567 sc-eQTL 3.32e-01 -0.0758 0.078 0.479 Mono L1
ENSG00000197442 MAP3K5 330909 sc-eQTL 5.01e-01 -0.0351 0.0521 0.479 Mono L1
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 8.35e-01 -0.0116 0.0553 0.479 Mono L1
ENSG00000286646 AL121933.2 339341 sc-eQTL 8.62e-01 -0.011 0.0631 0.479 Mono L1
ENSG00000027697 IFNGR1 -96063 sc-eQTL 9.63e-02 -0.0979 0.0586 0.479 NK L1
ENSG00000029363 BCLAF1 833535 sc-eQTL 5.51e-01 -0.0187 0.0313 0.479 NK L1
ENSG00000112357 PEX7 300822 sc-eQTL 7.82e-02 0.16 0.0904 0.479 NK L1
ENSG00000112378 PERP -984033 sc-eQTL 8.36e-01 0.0119 0.0574 0.479 NK L1
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 8.19e-01 0.0113 0.0491 0.479 NK L1
ENSG00000197442 MAP3K5 330909 sc-eQTL 9.70e-03 0.181 0.0692 0.479 NK L1
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 9.50e-02 0.116 0.0691 0.479 NK L1
ENSG00000027697 IFNGR1 -96063 sc-eQTL 5.86e-01 -0.0296 0.0544 0.479 Other_T L1
ENSG00000029363 BCLAF1 833535 sc-eQTL 5.26e-01 -0.0289 0.0456 0.479 Other_T L1
ENSG00000112357 PEX7 300822 sc-eQTL 2.39e-01 -0.104 0.0884 0.479 Other_T L1
ENSG00000112378 PERP -984033 sc-eQTL 4.99e-01 0.0481 0.0711 0.479 Other_T L1
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 5.65e-01 0.0195 0.0338 0.479 Other_T L1
ENSG00000146410 MTFR2 873051 sc-eQTL 1.00e+00 6.18e-06 0.0513 0.479 Other_T L1
ENSG00000197442 MAP3K5 330909 sc-eQTL 1.38e-01 0.0969 0.065 0.479 Other_T L1
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 5.95e-01 -0.0357 0.0672 0.479 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -96063 sc-eQTL 5.12e-01 -0.0598 0.091 0.477 B_Activated L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 8.94e-01 0.00984 0.074 0.477 B_Activated L2
ENSG00000112357 PEX7 300822 sc-eQTL 7.80e-02 0.157 0.0888 0.477 B_Activated L2
ENSG00000112378 PERP -984033 sc-eQTL 8.33e-01 0.00981 0.0464 0.477 B_Activated L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 3.19e-01 0.0898 0.0897 0.477 B_Activated L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 3.51e-01 -0.0939 0.1 0.477 B_Activated L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 3.90e-01 0.0676 0.0784 0.477 B_Activated L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 6.33e-01 -0.0391 0.0816 0.479 B_Intermediate L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 8.33e-01 0.00981 0.0465 0.479 B_Intermediate L2
ENSG00000112357 PEX7 300822 sc-eQTL 1.41e-01 0.125 0.085 0.479 B_Intermediate L2
ENSG00000112378 PERP -984033 sc-eQTL 7.88e-02 -0.137 0.0773 0.479 B_Intermediate L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 7.95e-01 0.0159 0.0611 0.479 B_Intermediate L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 8.93e-01 -0.00995 0.0739 0.479 B_Intermediate L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 5.38e-01 -0.0534 0.0866 0.479 B_Intermediate L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 7.12e-01 0.033 0.0892 0.483 B_Memory L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 1.59e-02 0.127 0.0522 0.483 B_Memory L2
ENSG00000112357 PEX7 300822 sc-eQTL 3.06e-01 -0.0923 0.0899 0.483 B_Memory L2
ENSG00000112378 PERP -984033 sc-eQTL 6.93e-01 0.0336 0.0847 0.483 B_Memory L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 4.57e-01 -0.0434 0.0583 0.483 B_Memory L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 2.92e-01 0.084 0.0795 0.483 B_Memory L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 6.45e-01 -0.04 0.0868 0.483 B_Memory L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 5.26e-01 -0.0451 0.071 0.479 B_Naive1 L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 5.99e-01 -0.0214 0.0406 0.479 B_Naive1 L2
ENSG00000112357 PEX7 300822 sc-eQTL 1.41e-01 0.138 0.0933 0.479 B_Naive1 L2
ENSG00000112378 PERP -984033 sc-eQTL 9.64e-01 -0.00368 0.082 0.479 B_Naive1 L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 9.85e-01 0.000899 0.0476 0.479 B_Naive1 L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 7.72e-01 0.0194 0.0668 0.479 B_Naive1 L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 1.83e-01 -0.0991 0.0742 0.479 B_Naive1 L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 9.05e-01 0.0102 0.0852 0.481 B_Naive2 L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 8.90e-01 0.00684 0.0494 0.481 B_Naive2 L2
ENSG00000112357 PEX7 300822 sc-eQTL 4.21e-01 0.075 0.0931 0.481 B_Naive2 L2
ENSG00000112378 PERP -984033 sc-eQTL 6.61e-01 -0.0298 0.0679 0.481 B_Naive2 L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 7.05e-01 0.0257 0.0679 0.481 B_Naive2 L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 2.18e-01 -0.089 0.072 0.481 B_Naive2 L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 4.59e-01 -0.065 0.0877 0.481 B_Naive2 L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 6.96e-01 -0.0314 0.0802 0.486 CD4_CTL L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 1.73e-02 0.168 0.0701 0.486 CD4_CTL L2
ENSG00000112357 PEX7 300822 sc-eQTL 5.45e-02 -0.17 0.0881 0.486 CD4_CTL L2
ENSG00000112378 PERP -984033 sc-eQTL 5.82e-01 0.0497 0.0901 0.486 CD4_CTL L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 4.83e-01 0.0369 0.0525 0.486 CD4_CTL L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 1.91e-01 0.11 0.0835 0.486 CD4_CTL L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 2.09e-01 -0.103 0.0815 0.486 CD4_CTL L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 9.22e-02 -0.0733 0.0433 0.479 CD4_Naive L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 8.86e-01 -0.00501 0.035 0.479 CD4_Naive L2
ENSG00000112357 PEX7 300822 sc-eQTL 3.42e-01 0.0783 0.0822 0.479 CD4_Naive L2
ENSG00000112378 PERP -984033 sc-eQTL 8.77e-01 0.0105 0.068 0.479 CD4_Naive L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 9.70e-01 0.00177 0.0477 0.479 CD4_Naive L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 6.79e-01 -0.0145 0.035 0.479 CD4_Naive L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 3.80e-01 -0.0542 0.0616 0.479 CD4_Naive L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 7.38e-02 -0.107 0.0596 0.479 CD4_TCM L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 5.37e-01 0.0234 0.0379 0.479 CD4_TCM L2
ENSG00000112357 PEX7 300822 sc-eQTL 4.39e-01 0.0683 0.0881 0.479 CD4_TCM L2
ENSG00000112378 PERP -984033 sc-eQTL 3.67e-01 -0.0673 0.0744 0.479 CD4_TCM L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 7.29e-01 0.015 0.0433 0.479 CD4_TCM L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 7.78e-01 -0.0139 0.0493 0.479 CD4_TCM L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 5.39e-01 -0.0373 0.0606 0.479 CD4_TCM L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 2.62e-03 -0.203 0.0668 0.479 CD4_TEM L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 8.43e-01 -0.0096 0.0484 0.479 CD4_TEM L2
ENSG00000112357 PEX7 300822 sc-eQTL 2.44e-01 -0.103 0.0878 0.479 CD4_TEM L2
ENSG00000112378 PERP -984033 sc-eQTL 2.89e-01 -0.0756 0.0712 0.479 CD4_TEM L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 6.69e-01 0.0194 0.0453 0.479 CD4_TEM L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 3.33e-01 0.0678 0.0698 0.479 CD4_TEM L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 1.73e-01 -0.099 0.0723 0.479 CD4_TEM L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 9.69e-01 -0.00245 0.0625 0.479 CD8_CTL L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 6.68e-01 0.0179 0.0417 0.479 CD8_CTL L2
ENSG00000112357 PEX7 300822 sc-eQTL 8.21e-01 0.0195 0.086 0.479 CD8_CTL L2
ENSG00000112378 PERP -984033 sc-eQTL 3.67e-01 -0.0747 0.0826 0.479 CD8_CTL L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 3.99e-01 0.0444 0.0525 0.479 CD8_CTL L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 1.82e-01 0.099 0.074 0.479 CD8_CTL L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 6.16e-01 0.0371 0.0739 0.479 CD8_CTL L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 1.65e-02 -0.15 0.0622 0.479 CD8_Naive L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 6.86e-01 -0.0178 0.044 0.479 CD8_Naive L2
ENSG00000112357 PEX7 300822 sc-eQTL 3.62e-01 -0.0833 0.0912 0.479 CD8_Naive L2
ENSG00000112378 PERP -984033 sc-eQTL 2.11e-01 -0.0868 0.0692 0.479 CD8_Naive L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 4.59e-01 0.0366 0.0493 0.479 CD8_Naive L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 7.53e-01 -0.0184 0.0585 0.479 CD8_Naive L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 6.26e-01 -0.0356 0.0729 0.479 CD8_Naive L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 6.03e-01 -0.0438 0.0841 0.484 CD8_TCM L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 5.94e-01 0.0337 0.0631 0.484 CD8_TCM L2
ENSG00000112357 PEX7 300822 sc-eQTL 1.26e-01 -0.147 0.096 0.484 CD8_TCM L2
ENSG00000112378 PERP -984033 sc-eQTL 1.07e-01 -0.152 0.0939 0.484 CD8_TCM L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 8.10e-01 0.011 0.0456 0.484 CD8_TCM L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 1.63e-01 0.114 0.081 0.484 CD8_TCM L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 8.41e-01 -0.0167 0.0834 0.484 CD8_TCM L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 3.96e-01 -0.068 0.08 0.475 CD8_TEM L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 6.54e-01 0.0339 0.0756 0.475 CD8_TEM L2
ENSG00000112357 PEX7 300822 sc-eQTL 5.10e-01 -0.0608 0.0921 0.475 CD8_TEM L2
ENSG00000112378 PERP -984033 sc-eQTL 8.12e-01 -0.0228 0.0959 0.475 CD8_TEM L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 2.32e-01 0.0705 0.0589 0.475 CD8_TEM L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 6.23e-01 0.045 0.0913 0.475 CD8_TEM L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 5.71e-01 -0.0497 0.0876 0.475 CD8_TEM L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 5.34e-01 -0.0394 0.0633 0.483 MAIT L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 4.18e-01 -0.0427 0.0525 0.483 MAIT L2
ENSG00000112357 PEX7 300822 sc-eQTL 1.54e-01 -0.122 0.0854 0.483 MAIT L2
ENSG00000112378 PERP -984033 sc-eQTL 9.02e-01 -0.011 0.0895 0.483 MAIT L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 6.04e-01 0.0221 0.0426 0.483 MAIT L2
ENSG00000146410 MTFR2 873051 sc-eQTL 9.71e-01 0.00261 0.071 0.483 MAIT L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 5.64e-02 0.141 0.0736 0.483 MAIT L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 9.33e-01 0.00668 0.0788 0.483 MAIT L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 6.47e-01 -0.032 0.0697 0.48 NK_CD56bright L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 9.77e-01 0.00147 0.0515 0.48 NK_CD56bright L2
ENSG00000112357 PEX7 300822 sc-eQTL 6.63e-01 0.0396 0.0909 0.48 NK_CD56bright L2
ENSG00000112378 PERP -984033 sc-eQTL 5.04e-01 -0.0545 0.0814 0.48 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 1.98e-01 0.0667 0.0517 0.48 NK_CD56bright L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 7.22e-01 0.0281 0.079 0.48 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 1.26e-01 0.127 0.0823 0.48 NK_CD56bright L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 9.31e-01 0.00474 0.0546 0.481 NK_CD56dim L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 6.62e-01 -0.0156 0.0356 0.481 NK_CD56dim L2
ENSG00000112357 PEX7 300822 sc-eQTL 8.73e-01 -0.0151 0.094 0.481 NK_CD56dim L2
ENSG00000112378 PERP -984033 sc-eQTL 1.82e-01 0.0882 0.0658 0.481 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 5.26e-01 0.0327 0.0514 0.481 NK_CD56dim L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 3.04e-02 0.16 0.0732 0.481 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 8.03e-02 0.134 0.0764 0.481 NK_CD56dim L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 1.70e-02 -0.171 0.0709 0.475 NK_HLA L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 4.72e-01 -0.0438 0.0608 0.475 NK_HLA L2
ENSG00000112357 PEX7 300822 sc-eQTL 2.67e-02 0.201 0.0902 0.475 NK_HLA L2
ENSG00000112378 PERP -984033 sc-eQTL 5.76e-01 0.0414 0.074 0.475 NK_HLA L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 9.87e-01 -0.000959 0.057 0.475 NK_HLA L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 6.11e-03 0.246 0.0888 0.475 NK_HLA L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 2.48e-01 0.106 0.0915 0.475 NK_HLA L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 2.98e-02 -0.126 0.0575 0.481 NK_cytokine L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 6.37e-01 -0.0205 0.0434 0.481 NK_cytokine L2
ENSG00000112357 PEX7 300822 sc-eQTL 6.66e-02 0.167 0.0905 0.481 NK_cytokine L2
ENSG00000112378 PERP -984033 sc-eQTL 5.26e-01 -0.0439 0.0692 0.481 NK_cytokine L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 3.87e-01 0.045 0.0518 0.481 NK_cytokine L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 8.35e-02 0.123 0.0708 0.481 NK_cytokine L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 2.12e-01 0.0976 0.0779 0.481 NK_cytokine L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 2.01e-01 -0.147 0.114 0.47 PB L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 4.42e-01 -0.0764 0.0989 0.47 PB L2
ENSG00000112357 PEX7 300822 sc-eQTL 7.15e-01 0.0432 0.118 0.47 PB L2
ENSG00000112378 PERP -984033 sc-eQTL 3.46e-01 -0.0695 0.0734 0.47 PB L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 5.18e-01 0.0578 0.0892 0.47 PB L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 2.15e-02 -0.232 0.0994 0.47 PB L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 2.94e-01 0.113 0.107 0.47 PB L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 3.13e-01 -0.0735 0.0727 0.476 Pro_T L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 9.34e-01 -0.00629 0.0756 0.476 Pro_T L2
ENSG00000112357 PEX7 300822 sc-eQTL 2.42e-01 0.104 0.0882 0.476 Pro_T L2
ENSG00000112378 PERP -984033 sc-eQTL 3.00e-01 0.073 0.0702 0.476 Pro_T L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 1.73e-01 0.0605 0.0442 0.476 Pro_T L2
ENSG00000146410 MTFR2 873051 sc-eQTL 2.66e-01 0.0685 0.0613 0.476 Pro_T L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 8.14e-01 -0.0203 0.0859 0.476 Pro_T L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 8.78e-02 -0.147 0.0856 0.476 Pro_T L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 4.33e-01 -0.0642 0.0818 0.479 Treg L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 8.82e-01 0.00786 0.0529 0.479 Treg L2
ENSG00000112357 PEX7 300822 sc-eQTL 7.55e-01 -0.0271 0.0865 0.479 Treg L2
ENSG00000112378 PERP -984033 sc-eQTL 2.08e-01 -0.118 0.0932 0.479 Treg L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 9.59e-01 0.00266 0.0521 0.479 Treg L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 4.49e-01 0.0427 0.0563 0.479 Treg L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 1.27e-01 0.121 0.079 0.479 Treg L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 8.44e-01 0.014 0.0712 0.483 cDC L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 5.70e-01 0.0408 0.0717 0.483 cDC L2
ENSG00000112357 PEX7 300822 sc-eQTL 5.94e-01 0.0492 0.092 0.483 cDC L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 9.19e-01 0.00711 0.0702 0.483 cDC L2
ENSG00000135525 MAP7 572567 sc-eQTL 3.81e-01 0.072 0.0819 0.483 cDC L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 4.53e-01 0.0542 0.0721 0.483 cDC L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 4.91e-01 0.0629 0.0913 0.483 cDC L2
ENSG00000286646 AL121933.2 339341 sc-eQTL 8.14e-01 0.0221 0.094 0.483 cDC L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 1.28e-01 -0.0755 0.0493 0.479 cMono_IL1B L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 6.04e-01 -0.0276 0.0532 0.479 cMono_IL1B L2
ENSG00000112357 PEX7 300822 sc-eQTL 1.52e-01 -0.128 0.0888 0.479 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 6.01e-01 -0.028 0.0534 0.479 cMono_IL1B L2
ENSG00000135525 MAP7 572567 sc-eQTL 1.68e-01 -0.106 0.0765 0.479 cMono_IL1B L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 5.75e-01 -0.0312 0.0555 0.479 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 7.18e-01 0.0206 0.057 0.479 cMono_IL1B L2
ENSG00000286646 AL121933.2 339341 sc-eQTL 3.21e-01 0.0709 0.0712 0.479 cMono_IL1B L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 4.84e-02 -0.112 0.0564 0.479 cMono_S100A L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 3.35e-01 0.0563 0.0583 0.479 cMono_S100A L2
ENSG00000112357 PEX7 300822 sc-eQTL 7.71e-01 0.0266 0.0913 0.479 cMono_S100A L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 1.92e-01 -0.0659 0.0504 0.479 cMono_S100A L2
ENSG00000135525 MAP7 572567 sc-eQTL 1.84e-01 -0.113 0.0848 0.479 cMono_S100A L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 3.78e-01 -0.0607 0.0686 0.479 cMono_S100A L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 8.38e-02 -0.125 0.0721 0.479 cMono_S100A L2
ENSG00000286646 AL121933.2 339341 sc-eQTL 4.34e-01 -0.0555 0.0708 0.479 cMono_S100A L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 8.98e-01 -0.0108 0.0838 0.491 gdT L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 5.54e-01 0.0437 0.0737 0.491 gdT L2
ENSG00000112357 PEX7 300822 sc-eQTL 8.49e-01 -0.0202 0.106 0.491 gdT L2
ENSG00000112378 PERP -984033 sc-eQTL 3.15e-01 0.0932 0.0924 0.491 gdT L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 2.05e-01 -0.0652 0.0513 0.491 gdT L2
ENSG00000146410 MTFR2 873051 sc-eQTL 3.69e-01 -0.0732 0.0811 0.491 gdT L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 2.78e-01 0.118 0.109 0.491 gdT L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 7.64e-01 -0.0281 0.0934 0.491 gdT L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 3.48e-01 -0.057 0.0606 0.48 intMono L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 5.26e-01 0.0509 0.0802 0.48 intMono L2
ENSG00000112357 PEX7 300822 sc-eQTL 8.33e-01 0.0173 0.0819 0.48 intMono L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 1.22e-01 -0.081 0.0522 0.48 intMono L2
ENSG00000135525 MAP7 572567 sc-eQTL 4.58e-02 0.16 0.0798 0.48 intMono L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 4.16e-01 0.0695 0.0852 0.48 intMono L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 6.21e-01 0.0387 0.0782 0.48 intMono L2
ENSG00000286646 AL121933.2 339341 sc-eQTL 9.87e-01 0.00142 0.0902 0.48 intMono L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 2.21e-02 -0.167 0.0722 0.473 ncMono L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 6.04e-01 -0.0295 0.0568 0.473 ncMono L2
ENSG00000112357 PEX7 300822 sc-eQTL 5.61e-01 -0.0527 0.0906 0.473 ncMono L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 5.77e-01 -0.0362 0.0647 0.473 ncMono L2
ENSG00000135525 MAP7 572567 sc-eQTL 1.72e-01 0.109 0.0796 0.473 ncMono L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 9.66e-01 -0.00364 0.0841 0.473 ncMono L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 2.99e-01 0.0841 0.0807 0.473 ncMono L2
ENSG00000286646 AL121933.2 339341 sc-eQTL 7.45e-01 0.0277 0.0853 0.473 ncMono L2
ENSG00000027697 IFNGR1 -96063 sc-eQTL 7.50e-01 -0.0259 0.0813 0.475 pDC L2
ENSG00000029363 BCLAF1 833535 sc-eQTL 5.07e-01 0.0405 0.0609 0.475 pDC L2
ENSG00000112357 PEX7 300822 sc-eQTL 3.56e-01 0.0827 0.0893 0.475 pDC L2
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 9.61e-01 -0.0037 0.0754 0.475 pDC L2
ENSG00000135525 MAP7 572567 sc-eQTL 5.62e-01 0.0363 0.0625 0.475 pDC L2
ENSG00000197442 MAP3K5 330909 sc-eQTL 8.80e-01 0.0152 0.1 0.475 pDC L2
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 4.29e-01 0.0605 0.0764 0.475 pDC L2
ENSG00000286646 AL121933.2 339341 sc-eQTL 1.90e-01 -0.121 0.0918 0.475 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -96063 sc-eQTL 6.24e-01 -0.0354 0.0722 0.479 B_Memory LOneK1K
ENSG00000029363 BCLAF1 833535 sc-eQTL 3.52e-01 0.0377 0.0405 0.479 B_Memory LOneK1K
ENSG00000112357 PEX7 300822 sc-eQTL 6.53e-01 0.0374 0.083 0.479 B_Memory LOneK1K
ENSG00000112378 PERP -984033 sc-eQTL 7.89e-01 -0.0207 0.0771 0.479 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 5.50e-01 -0.0305 0.0509 0.479 B_Memory LOneK1K
ENSG00000197442 MAP3K5 330909 sc-eQTL 7.26e-01 0.0237 0.0674 0.479 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 7.04e-01 -0.0328 0.0861 0.479 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -96063 sc-eQTL 6.69e-01 -0.032 0.0746 0.479 B_Naive LOneK1K
ENSG00000029363 BCLAF1 833535 sc-eQTL 8.25e-01 -0.00759 0.0343 0.479 B_Naive LOneK1K
ENSG00000112357 PEX7 300822 sc-eQTL 3.68e-01 0.0817 0.0906 0.479 B_Naive LOneK1K
ENSG00000112378 PERP -984033 sc-eQTL 9.51e-01 -0.00502 0.0813 0.479 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 9.07e-01 0.00499 0.0427 0.479 B_Naive LOneK1K
ENSG00000197442 MAP3K5 330909 sc-eQTL 9.99e-01 5.43e-05 0.0626 0.479 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 3.04e-01 -0.0781 0.0759 0.479 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -96063 sc-eQTL 5.10e-02 -0.0961 0.049 0.479 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 833535 sc-eQTL 6.57e-01 0.0205 0.046 0.479 CD14_Mono LOneK1K
ENSG00000112357 PEX7 300822 sc-eQTL 2.75e-01 -0.0969 0.0885 0.479 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 8.22e-01 -0.0103 0.0457 0.479 CD14_Mono LOneK1K
ENSG00000135525 MAP7 572567 sc-eQTL 2.58e-02 -0.176 0.0784 0.479 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 330909 sc-eQTL 2.93e-01 -0.0564 0.0534 0.479 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 7.34e-01 -0.0186 0.0548 0.479 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 339341 sc-eQTL 8.04e-01 -0.0158 0.0637 0.479 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -96063 sc-eQTL 3.90e-02 -0.121 0.0585 0.481 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 833535 sc-eQTL 9.12e-01 -0.00592 0.0534 0.481 CD16_Mono LOneK1K
ENSG00000112357 PEX7 300822 sc-eQTL 7.80e-01 -0.0249 0.0891 0.481 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 2.89e-01 -0.0585 0.055 0.481 CD16_Mono LOneK1K
ENSG00000135525 MAP7 572567 sc-eQTL 3.76e-02 0.178 0.0853 0.481 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 330909 sc-eQTL 2.05e-01 0.0897 0.0705 0.481 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 4.94e-01 0.0506 0.0739 0.481 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 339341 sc-eQTL 4.88e-01 0.0583 0.0839 0.481 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -96063 sc-eQTL 2.39e-01 -0.0659 0.0558 0.481 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 833535 sc-eQTL 5.65e-01 -0.0187 0.0324 0.481 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 300822 sc-eQTL 2.09e-01 0.119 0.094 0.481 NK_CD56dim LOneK1K
ENSG00000112378 PERP -984033 sc-eQTL 5.63e-01 0.0338 0.0585 0.481 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -743828 sc-eQTL 9.93e-01 -0.000419 0.051 0.481 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 330909 sc-eQTL 1.13e-02 0.173 0.0678 0.481 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -744847 sc-eQTL 8.49e-02 0.123 0.0708 0.481 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -96063 pQTL 0.000624 -0.053 0.0155 0.0 0.0 0.442
ENSG00000027697 IFNGR1 -96063 eQTL 2.86e-11 -0.088 0.0131 0.0 0.0 0.443

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -96063 5.1e-06 5.11e-06 9.13e-07 2.89e-06 1.51e-06 1.58e-06 5.37e-06 9.52e-07 4.96e-06 2.46e-06 5.33e-06 3.45e-06 7.06e-06 2.15e-06 1.23e-06 3.36e-06 1.82e-06 3.32e-06 1.36e-06 9.64e-07 2.77e-06 4.95e-06 4.24e-06 1.39e-06 7.14e-06 1.67e-06 2.55e-06 1.73e-06 4.47e-06 4.33e-06 2.7e-06 6.09e-07 6.92e-07 1.73e-06 2.27e-06 9.77e-07 9.86e-07 4.59e-07 1.1e-06 4.16e-07 2.08e-07 5.76e-06 4e-07 1.89e-07 4.38e-07 8.63e-07 7.92e-07 2.72e-07 1.78e-07
ENSG00000112357 \N 300822 1.24e-06 9.03e-07 1.76e-07 3.17e-07 1.54e-07 3.2e-07 7.99e-07 2.47e-07 7.56e-07 2.67e-07 1.09e-06 5.51e-07 1.33e-06 2.05e-07 4.21e-07 4.12e-07 7.78e-07 5.05e-07 3.79e-07 3.96e-07 2.57e-07 6.91e-07 5.67e-07 3.32e-07 1.53e-06 2.52e-07 5.05e-07 4.71e-07 7.07e-07 8.5e-07 4.59e-07 4.34e-08 1.08e-07 2.72e-07 3.24e-07 2.76e-07 2.34e-07 1.27e-07 8.72e-08 8.8e-09 1.14e-07 1.06e-06 6.37e-08 1.06e-08 1.82e-07 6.01e-08 1.37e-07 5.86e-08 6.14e-08