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Genes within 1Mb (chr6:137110836:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -108613 sc-eQTL 1.68e-01 -0.11 0.0799 0.248 B L1
ENSG00000029363 BCLAF1 820985 sc-eQTL 4.37e-01 -0.0278 0.0357 0.248 B L1
ENSG00000112357 PEX7 288272 sc-eQTL 9.31e-02 0.159 0.0943 0.248 B L1
ENSG00000112378 PERP -996583 sc-eQTL 4.55e-01 -0.047 0.0628 0.248 B L1
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 7.29e-01 -0.0175 0.0506 0.248 B L1
ENSG00000197442 MAP3K5 318359 sc-eQTL 6.64e-02 -0.129 0.07 0.248 B L1
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 7.80e-01 -0.0223 0.0797 0.248 B L1
ENSG00000027697 IFNGR1 -108613 sc-eQTL 1.82e-01 -0.0708 0.0529 0.248 CD4T L1
ENSG00000029363 BCLAF1 820985 sc-eQTL 3.25e-01 -0.0395 0.0401 0.248 CD4T L1
ENSG00000112357 PEX7 288272 sc-eQTL 8.71e-01 -0.0139 0.0855 0.248 CD4T L1
ENSG00000112378 PERP -996583 sc-eQTL 9.23e-01 0.00556 0.0574 0.248 CD4T L1
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 9.64e-01 -0.00245 0.0538 0.248 CD4T L1
ENSG00000197442 MAP3K5 318359 sc-eQTL 1.63e-01 -0.0571 0.0408 0.248 CD4T L1
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 5.58e-02 -0.129 0.0671 0.248 CD4T L1
ENSG00000027697 IFNGR1 -108613 sc-eQTL 6.40e-01 0.0284 0.0606 0.248 CD8T L1
ENSG00000029363 BCLAF1 820985 sc-eQTL 7.68e-01 -0.0121 0.041 0.248 CD8T L1
ENSG00000112357 PEX7 288272 sc-eQTL 4.77e-01 -0.072 0.101 0.248 CD8T L1
ENSG00000112378 PERP -996583 sc-eQTL 4.62e-02 -0.131 0.0655 0.248 CD8T L1
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 7.33e-01 0.0174 0.051 0.248 CD8T L1
ENSG00000197442 MAP3K5 318359 sc-eQTL 8.16e-01 -0.0126 0.0539 0.248 CD8T L1
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 7.77e-01 0.0212 0.075 0.248 CD8T L1
ENSG00000027697 IFNGR1 -108613 sc-eQTL 7.28e-01 0.0255 0.0731 0.25 DC L1
ENSG00000029363 BCLAF1 820985 sc-eQTL 8.53e-01 -0.0122 0.0658 0.25 DC L1
ENSG00000112357 PEX7 288272 sc-eQTL 9.31e-01 0.00896 0.103 0.25 DC L1
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 9.32e-01 0.00665 0.0781 0.25 DC L1
ENSG00000135525 MAP7 560017 sc-eQTL 7.72e-01 0.0246 0.0846 0.25 DC L1
ENSG00000197442 MAP3K5 318359 sc-eQTL 4.42e-01 0.0624 0.081 0.25 DC L1
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 4.51e-01 0.06 0.0795 0.25 DC L1
ENSG00000286646 AL121933.2 326791 sc-eQTL 9.53e-01 -0.00618 0.106 0.25 DC L1
ENSG00000027697 IFNGR1 -108613 sc-eQTL 7.97e-02 -0.106 0.0603 0.248 Mono L1
ENSG00000029363 BCLAF1 820985 sc-eQTL 2.47e-01 0.0601 0.0518 0.248 Mono L1
ENSG00000112357 PEX7 288272 sc-eQTL 2.48e-01 -0.118 0.102 0.248 Mono L1
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 6.75e-01 0.0217 0.0515 0.248 Mono L1
ENSG00000135525 MAP7 560017 sc-eQTL 1.97e-01 -0.116 0.0899 0.248 Mono L1
ENSG00000197442 MAP3K5 318359 sc-eQTL 4.18e-01 -0.0488 0.0601 0.248 Mono L1
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 8.24e-01 0.0142 0.0639 0.248 Mono L1
ENSG00000286646 AL121933.2 326791 sc-eQTL 2.54e-01 0.0831 0.0726 0.248 Mono L1
ENSG00000027697 IFNGR1 -108613 sc-eQTL 4.27e-01 -0.055 0.0691 0.249 NK L1
ENSG00000029363 BCLAF1 820985 sc-eQTL 8.43e-01 0.00731 0.0368 0.249 NK L1
ENSG00000112357 PEX7 288272 sc-eQTL 4.55e-01 0.0799 0.107 0.249 NK L1
ENSG00000112378 PERP -996583 sc-eQTL 2.12e-01 0.084 0.0671 0.249 NK L1
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 7.64e-01 0.0174 0.0576 0.249 NK L1
ENSG00000197442 MAP3K5 318359 sc-eQTL 8.15e-01 0.0193 0.0826 0.249 NK L1
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 8.96e-01 0.0107 0.0817 0.249 NK L1
ENSG00000027697 IFNGR1 -108613 sc-eQTL 9.75e-01 0.00201 0.0631 0.248 Other_T L1
ENSG00000029363 BCLAF1 820985 sc-eQTL 2.21e-01 -0.0648 0.0528 0.248 Other_T L1
ENSG00000112357 PEX7 288272 sc-eQTL 7.25e-01 -0.0362 0.103 0.248 Other_T L1
ENSG00000112378 PERP -996583 sc-eQTL 1.84e-01 0.11 0.0823 0.248 Other_T L1
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 6.24e-01 0.0193 0.0393 0.248 Other_T L1
ENSG00000146410 MTFR2 860501 sc-eQTL 9.90e-01 0.000721 0.0595 0.248 Other_T L1
ENSG00000197442 MAP3K5 318359 sc-eQTL 9.33e-01 -0.00637 0.0759 0.248 Other_T L1
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 5.62e-01 -0.0453 0.0779 0.248 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -108613 sc-eQTL 4.08e-01 -0.087 0.105 0.258 B_Activated L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 3.75e-01 0.0756 0.085 0.258 B_Activated L2
ENSG00000112357 PEX7 288272 sc-eQTL 3.37e-03 0.299 0.101 0.258 B_Activated L2
ENSG00000112378 PERP -996583 sc-eQTL 9.96e-01 -0.00027 0.0534 0.258 B_Activated L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 5.84e-02 0.195 0.103 0.258 B_Activated L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 3.32e-01 -0.113 0.116 0.258 B_Activated L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 4.12e-01 0.0743 0.0904 0.258 B_Activated L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 6.98e-01 -0.0366 0.0941 0.249 B_Intermediate L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 9.28e-01 -0.00484 0.0536 0.249 B_Intermediate L2
ENSG00000112357 PEX7 288272 sc-eQTL 4.67e-02 0.195 0.0976 0.249 B_Intermediate L2
ENSG00000112378 PERP -996583 sc-eQTL 5.74e-02 -0.17 0.089 0.249 B_Intermediate L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 7.20e-01 0.0253 0.0705 0.249 B_Intermediate L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 1.93e-01 -0.111 0.0848 0.249 B_Intermediate L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 8.97e-01 0.0129 0.1 0.249 B_Intermediate L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 7.86e-01 -0.028 0.103 0.25 B_Memory L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 2.92e-01 0.0644 0.061 0.25 B_Memory L2
ENSG00000112357 PEX7 288272 sc-eQTL 8.04e-01 0.0258 0.104 0.25 B_Memory L2
ENSG00000112378 PERP -996583 sc-eQTL 5.42e-01 0.0597 0.0978 0.25 B_Memory L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 4.49e-01 -0.051 0.0673 0.25 B_Memory L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 8.50e-02 0.158 0.0913 0.25 B_Memory L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 3.72e-01 -0.0895 0.1 0.25 B_Memory L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 1.20e-01 -0.126 0.0807 0.248 B_Naive1 L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 3.68e-01 -0.0418 0.0463 0.248 B_Naive1 L2
ENSG00000112357 PEX7 288272 sc-eQTL 5.24e-01 0.0683 0.107 0.248 B_Naive1 L2
ENSG00000112378 PERP -996583 sc-eQTL 7.00e-01 0.0361 0.0936 0.248 B_Naive1 L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 7.30e-01 0.0188 0.0543 0.248 B_Naive1 L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 9.12e-01 0.00848 0.0763 0.248 B_Naive1 L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 8.64e-01 -0.0146 0.0851 0.248 B_Naive1 L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 5.25e-01 -0.0622 0.0976 0.249 B_Naive2 L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 2.05e-01 -0.0717 0.0564 0.249 B_Naive2 L2
ENSG00000112357 PEX7 288272 sc-eQTL 1.38e-01 0.158 0.106 0.249 B_Naive2 L2
ENSG00000112378 PERP -996583 sc-eQTL 3.46e-01 -0.0733 0.0777 0.249 B_Naive2 L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 8.98e-01 0.01 0.0778 0.249 B_Naive2 L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 3.44e-02 -0.174 0.0819 0.249 B_Naive2 L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 9.29e-02 -0.169 0.0999 0.249 B_Naive2 L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 7.91e-01 -0.0244 0.0922 0.248 CD4_CTL L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 6.26e-01 0.0399 0.0817 0.248 CD4_CTL L2
ENSG00000112357 PEX7 288272 sc-eQTL 7.34e-01 -0.0348 0.102 0.248 CD4_CTL L2
ENSG00000112378 PERP -996583 sc-eQTL 1.20e-01 0.161 0.103 0.248 CD4_CTL L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 8.00e-01 0.0153 0.0604 0.248 CD4_CTL L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 5.72e-01 -0.0546 0.0963 0.248 CD4_CTL L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 5.82e-01 -0.0518 0.094 0.248 CD4_CTL L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 6.08e-01 -0.0259 0.0506 0.248 CD4_Naive L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 3.43e-01 -0.0386 0.0405 0.248 CD4_Naive L2
ENSG00000112357 PEX7 288272 sc-eQTL 6.84e-01 0.0389 0.0955 0.248 CD4_Naive L2
ENSG00000112378 PERP -996583 sc-eQTL 5.86e-01 0.0429 0.0788 0.248 CD4_Naive L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 7.13e-01 -0.0204 0.0553 0.248 CD4_Naive L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 2.84e-01 -0.0435 0.0405 0.248 CD4_Naive L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 1.79e-02 -0.169 0.0707 0.248 CD4_Naive L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 1.75e-01 -0.0944 0.0693 0.248 CD4_TCM L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 9.08e-01 -0.00506 0.0439 0.248 CD4_TCM L2
ENSG00000112357 PEX7 288272 sc-eQTL 1.82e-01 0.136 0.102 0.248 CD4_TCM L2
ENSG00000112378 PERP -996583 sc-eQTL 3.60e-01 -0.079 0.0862 0.248 CD4_TCM L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 9.88e-01 -0.000757 0.0502 0.248 CD4_TCM L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 3.54e-01 -0.053 0.057 0.248 CD4_TCM L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 5.58e-01 -0.0412 0.0702 0.248 CD4_TCM L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 1.02e-01 -0.13 0.0791 0.248 CD4_TEM L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 7.16e-01 -0.0206 0.0564 0.248 CD4_TEM L2
ENSG00000112357 PEX7 288272 sc-eQTL 1.04e-01 -0.167 0.102 0.248 CD4_TEM L2
ENSG00000112378 PERP -996583 sc-eQTL 3.96e-01 -0.0708 0.0832 0.248 CD4_TEM L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 2.36e-01 0.0626 0.0527 0.248 CD4_TEM L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 9.61e-01 0.00396 0.0817 0.248 CD4_TEM L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 7.19e-02 -0.152 0.0842 0.248 CD4_TEM L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 2.43e-01 0.0846 0.0723 0.248 CD8_CTL L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 9.83e-01 0.00106 0.0483 0.248 CD8_CTL L2
ENSG00000112357 PEX7 288272 sc-eQTL 8.76e-01 0.0156 0.0997 0.248 CD8_CTL L2
ENSG00000112378 PERP -996583 sc-eQTL 1.34e-01 -0.144 0.0954 0.248 CD8_CTL L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 8.65e-01 -0.0104 0.061 0.248 CD8_CTL L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 3.98e-01 0.0729 0.086 0.248 CD8_CTL L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 9.48e-01 0.0056 0.0858 0.248 CD8_CTL L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 3.41e-01 -0.0696 0.0729 0.248 CD8_Naive L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 7.49e-01 -0.0163 0.051 0.248 CD8_Naive L2
ENSG00000112357 PEX7 288272 sc-eQTL 9.99e-01 -0.000164 0.106 0.248 CD8_Naive L2
ENSG00000112378 PERP -996583 sc-eQTL 3.45e-01 -0.076 0.0803 0.248 CD8_Naive L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 7.61e-01 0.0174 0.0571 0.248 CD8_Naive L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 6.59e-01 -0.0299 0.0677 0.248 CD8_Naive L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 3.77e-01 -0.0747 0.0843 0.248 CD8_Naive L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 7.02e-01 0.037 0.0967 0.252 CD8_TCM L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 4.37e-01 -0.0564 0.0725 0.252 CD8_TCM L2
ENSG00000112357 PEX7 288272 sc-eQTL 2.67e-01 -0.123 0.111 0.252 CD8_TCM L2
ENSG00000112378 PERP -996583 sc-eQTL 3.74e-01 -0.0966 0.109 0.252 CD8_TCM L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 9.69e-01 -0.00206 0.0524 0.252 CD8_TCM L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 7.47e-01 -0.0302 0.0936 0.252 CD8_TCM L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 4.73e-01 0.0689 0.0958 0.252 CD8_TCM L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 9.75e-01 -0.00286 0.092 0.242 CD8_TEM L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 6.22e-01 -0.0428 0.0867 0.242 CD8_TEM L2
ENSG00000112357 PEX7 288272 sc-eQTL 4.29e-01 0.0837 0.106 0.242 CD8_TEM L2
ENSG00000112378 PERP -996583 sc-eQTL 8.27e-01 -0.024 0.11 0.242 CD8_TEM L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 6.33e-01 0.0325 0.0678 0.242 CD8_TEM L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 5.61e-01 -0.061 0.105 0.242 CD8_TEM L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 5.47e-01 -0.0606 0.101 0.242 CD8_TEM L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 5.98e-01 -0.0386 0.0731 0.251 MAIT L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 4.71e-01 -0.0438 0.0607 0.251 MAIT L2
ENSG00000112357 PEX7 288272 sc-eQTL 5.04e-01 -0.0663 0.0991 0.251 MAIT L2
ENSG00000112378 PERP -996583 sc-eQTL 5.02e-01 0.0695 0.103 0.251 MAIT L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 9.11e-01 0.00553 0.0492 0.251 MAIT L2
ENSG00000146410 MTFR2 860501 sc-eQTL 4.43e-01 0.0629 0.0819 0.251 MAIT L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 3.34e-01 0.0829 0.0855 0.251 MAIT L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 9.25e-01 -0.00862 0.091 0.251 MAIT L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 5.62e-01 -0.0473 0.0814 0.249 NK_CD56bright L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 6.58e-01 -0.0267 0.0601 0.249 NK_CD56bright L2
ENSG00000112357 PEX7 288272 sc-eQTL 8.94e-01 0.0142 0.106 0.249 NK_CD56bright L2
ENSG00000112378 PERP -996583 sc-eQTL 8.23e-01 0.0213 0.0951 0.249 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 3.13e-01 0.0612 0.0605 0.249 NK_CD56bright L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 6.61e-01 -0.0405 0.0922 0.249 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 4.11e-01 0.0795 0.0965 0.249 NK_CD56bright L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 5.69e-01 0.036 0.0632 0.25 NK_CD56dim L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 8.33e-01 0.00872 0.0413 0.25 NK_CD56dim L2
ENSG00000112357 PEX7 288272 sc-eQTL 4.88e-01 -0.0756 0.109 0.25 NK_CD56dim L2
ENSG00000112378 PERP -996583 sc-eQTL 1.21e-02 0.191 0.0754 0.25 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 4.82e-01 0.0419 0.0595 0.25 NK_CD56dim L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 9.19e-01 0.00875 0.0857 0.25 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 5.48e-01 0.0536 0.0891 0.25 NK_CD56dim L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 4.39e-02 -0.172 0.0849 0.242 NK_HLA L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 7.64e-01 0.0219 0.0727 0.242 NK_HLA L2
ENSG00000112357 PEX7 288272 sc-eQTL 3.81e-02 0.225 0.108 0.242 NK_HLA L2
ENSG00000112378 PERP -996583 sc-eQTL 7.05e-01 0.0335 0.0884 0.242 NK_HLA L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 4.57e-01 -0.0507 0.0679 0.242 NK_HLA L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 2.99e-01 0.112 0.108 0.242 NK_HLA L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 7.35e-02 -0.196 0.109 0.242 NK_HLA L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 2.20e-01 -0.0844 0.0686 0.25 NK_cytokine L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 9.50e-01 0.0032 0.0514 0.25 NK_cytokine L2
ENSG00000112357 PEX7 288272 sc-eQTL 8.07e-02 0.188 0.107 0.25 NK_cytokine L2
ENSG00000112378 PERP -996583 sc-eQTL 6.68e-01 -0.0352 0.082 0.25 NK_cytokine L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 4.09e-01 0.0508 0.0614 0.25 NK_cytokine L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 7.84e-01 -0.0232 0.0844 0.25 NK_cytokine L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 9.59e-01 0.00475 0.0926 0.25 NK_cytokine L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 1.02e-01 -0.219 0.133 0.237 PB L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 1.39e-02 -0.282 0.113 0.237 PB L2
ENSG00000112357 PEX7 288272 sc-eQTL 3.51e-01 0.129 0.138 0.237 PB L2
ENSG00000112378 PERP -996583 sc-eQTL 3.24e-02 -0.183 0.0845 0.237 PB L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 3.88e-01 0.0905 0.104 0.237 PB L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 1.98e-02 -0.275 0.116 0.237 PB L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 1.43e-01 0.184 0.124 0.237 PB L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 5.62e-01 0.0474 0.0816 0.25 Pro_T L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 5.93e-01 -0.0453 0.0846 0.25 Pro_T L2
ENSG00000112357 PEX7 288272 sc-eQTL 4.92e-01 0.0681 0.0991 0.25 Pro_T L2
ENSG00000112378 PERP -996583 sc-eQTL 3.27e-01 0.0773 0.0787 0.25 Pro_T L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 1.72e-01 0.0678 0.0495 0.25 Pro_T L2
ENSG00000146410 MTFR2 860501 sc-eQTL 7.09e-01 0.0258 0.0689 0.25 Pro_T L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 3.61e-02 -0.201 0.0953 0.25 Pro_T L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 8.57e-01 -0.0174 0.0966 0.25 Pro_T L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 5.48e-01 -0.0569 0.0947 0.248 Treg L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 7.35e-01 -0.0207 0.0612 0.248 Treg L2
ENSG00000112357 PEX7 288272 sc-eQTL 9.00e-01 -0.0126 0.1 0.248 Treg L2
ENSG00000112378 PERP -996583 sc-eQTL 4.19e-01 0.0875 0.108 0.248 Treg L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 9.59e-01 0.00312 0.0602 0.248 Treg L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 1.94e-01 0.0847 0.065 0.248 Treg L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 9.78e-01 0.00254 0.0919 0.248 Treg L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 2.03e-01 0.103 0.0809 0.254 cDC L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 6.78e-01 0.0341 0.0819 0.254 cDC L2
ENSG00000112357 PEX7 288272 sc-eQTL 2.68e-01 0.116 0.105 0.254 cDC L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 8.60e-01 0.0141 0.0801 0.254 cDC L2
ENSG00000135525 MAP7 560017 sc-eQTL 1.53e-01 0.134 0.0932 0.254 cDC L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 9.33e-01 -0.00691 0.0825 0.254 cDC L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 3.49e-01 0.0978 0.104 0.254 cDC L2
ENSG00000286646 AL121933.2 326791 sc-eQTL 7.73e-01 -0.0311 0.107 0.254 cDC L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 4.80e-01 -0.0402 0.0567 0.248 cMono_IL1B L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 7.07e-01 0.0229 0.0609 0.248 cMono_IL1B L2
ENSG00000112357 PEX7 288272 sc-eQTL 4.25e-01 -0.0815 0.102 0.248 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 8.09e-01 0.0148 0.0611 0.248 cMono_IL1B L2
ENSG00000135525 MAP7 560017 sc-eQTL 1.66e-02 -0.21 0.0868 0.248 cMono_IL1B L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 6.52e-01 -0.0287 0.0635 0.248 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 4.81e-01 0.046 0.0652 0.248 cMono_IL1B L2
ENSG00000286646 AL121933.2 326791 sc-eQTL 1.04e-01 0.133 0.0812 0.248 cMono_IL1B L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 6.76e-02 -0.119 0.0648 0.248 cMono_S100A L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 1.47e-01 0.0972 0.0668 0.248 cMono_S100A L2
ENSG00000112357 PEX7 288272 sc-eQTL 4.75e-01 -0.075 0.105 0.248 cMono_S100A L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 3.40e-01 -0.0554 0.0579 0.248 cMono_S100A L2
ENSG00000135525 MAP7 560017 sc-eQTL 7.79e-01 0.0274 0.0977 0.248 cMono_S100A L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 6.36e-01 -0.0374 0.0789 0.248 cMono_S100A L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 9.62e-02 -0.138 0.0828 0.248 cMono_S100A L2
ENSG00000286646 AL121933.2 326791 sc-eQTL 7.93e-01 0.0214 0.0814 0.248 cMono_S100A L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 4.63e-01 0.0718 0.0976 0.245 gdT L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 8.34e-01 -0.0181 0.086 0.245 gdT L2
ENSG00000112357 PEX7 288272 sc-eQTL 7.66e-01 -0.0369 0.124 0.245 gdT L2
ENSG00000112378 PERP -996583 sc-eQTL 4.96e-02 0.211 0.107 0.245 gdT L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 8.85e-01 0.00874 0.0601 0.245 gdT L2
ENSG00000146410 MTFR2 860501 sc-eQTL 2.53e-01 0.108 0.0944 0.245 gdT L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 6.81e-01 0.0524 0.127 0.245 gdT L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 3.20e-01 -0.108 0.109 0.245 gdT L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 4.17e-01 -0.0567 0.0697 0.251 intMono L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 2.19e-01 0.113 0.0919 0.251 intMono L2
ENSG00000112357 PEX7 288272 sc-eQTL 5.47e-01 -0.0567 0.094 0.251 intMono L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 6.50e-01 0.0274 0.0603 0.251 intMono L2
ENSG00000135525 MAP7 560017 sc-eQTL 1.83e-01 0.123 0.0922 0.251 intMono L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 6.85e-01 -0.0399 0.0981 0.251 intMono L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 4.92e-01 0.0618 0.0897 0.251 intMono L2
ENSG00000286646 AL121933.2 326791 sc-eQTL 3.84e-01 0.0902 0.103 0.251 intMono L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 3.93e-02 -0.17 0.0821 0.247 ncMono L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 2.38e-01 -0.0759 0.0642 0.247 ncMono L2
ENSG00000112357 PEX7 288272 sc-eQTL 6.65e-01 -0.0445 0.103 0.247 ncMono L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 5.51e-01 0.0438 0.0733 0.247 ncMono L2
ENSG00000135525 MAP7 560017 sc-eQTL 9.16e-01 0.00956 0.0907 0.247 ncMono L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 6.76e-01 -0.0398 0.0953 0.247 ncMono L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 7.21e-01 0.0329 0.0918 0.247 ncMono L2
ENSG00000286646 AL121933.2 326791 sc-eQTL 8.18e-01 -0.0223 0.0968 0.247 ncMono L2
ENSG00000027697 IFNGR1 -108613 sc-eQTL 6.89e-01 -0.0378 0.0942 0.26 pDC L2
ENSG00000029363 BCLAF1 820985 sc-eQTL 5.45e-01 0.0428 0.0707 0.26 pDC L2
ENSG00000112357 PEX7 288272 sc-eQTL 5.59e-01 -0.0607 0.104 0.26 pDC L2
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 9.02e-01 0.0108 0.0874 0.26 pDC L2
ENSG00000135525 MAP7 560017 sc-eQTL 2.37e-01 -0.0857 0.0722 0.26 pDC L2
ENSG00000197442 MAP3K5 318359 sc-eQTL 1.83e-01 0.154 0.115 0.26 pDC L2
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 5.27e-01 -0.0561 0.0886 0.26 pDC L2
ENSG00000286646 AL121933.2 326791 sc-eQTL 5.53e-01 0.0635 0.107 0.26 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 -108613 sc-eQTL 8.93e-01 0.0113 0.0841 0.248 B_Memory LOneK1K
ENSG00000029363 BCLAF1 820985 sc-eQTL 9.31e-01 0.00412 0.0472 0.248 B_Memory LOneK1K
ENSG00000112357 PEX7 288272 sc-eQTL 1.39e-02 0.236 0.0953 0.248 B_Memory LOneK1K
ENSG00000112378 PERP -996583 sc-eQTL 6.80e-01 -0.0371 0.0898 0.248 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 4.23e-01 -0.0476 0.0592 0.248 B_Memory LOneK1K
ENSG00000197442 MAP3K5 318359 sc-eQTL 6.71e-01 -0.0334 0.0785 0.248 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 9.86e-01 -0.00171 0.1 0.248 B_Memory LOneK1K
ENSG00000027697 IFNGR1 -108613 sc-eQTL 1.01e-01 -0.14 0.085 0.248 B_Naive LOneK1K
ENSG00000029363 BCLAF1 820985 sc-eQTL 8.50e-02 -0.0675 0.039 0.248 B_Naive LOneK1K
ENSG00000112357 PEX7 288272 sc-eQTL 3.42e-01 0.099 0.104 0.248 B_Naive LOneK1K
ENSG00000112378 PERP -996583 sc-eQTL 7.17e-01 0.0338 0.0932 0.248 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 8.78e-01 0.00753 0.049 0.248 B_Naive LOneK1K
ENSG00000197442 MAP3K5 318359 sc-eQTL 4.52e-01 -0.054 0.0717 0.248 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 4.81e-01 -0.0615 0.0871 0.248 B_Naive LOneK1K
ENSG00000027697 IFNGR1 -108613 sc-eQTL 1.59e-01 -0.0802 0.0568 0.248 CD14_Mono LOneK1K
ENSG00000029363 BCLAF1 820985 sc-eQTL 2.61e-01 0.0598 0.053 0.248 CD14_Mono LOneK1K
ENSG00000112357 PEX7 288272 sc-eQTL 2.87e-01 -0.109 0.102 0.248 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 8.88e-01 0.00741 0.0528 0.248 CD14_Mono LOneK1K
ENSG00000135525 MAP7 560017 sc-eQTL 4.86e-02 -0.18 0.0908 0.248 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 318359 sc-eQTL 3.28e-01 -0.0605 0.0617 0.248 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 9.35e-01 0.00514 0.0633 0.248 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 326791 sc-eQTL 3.30e-01 0.0718 0.0735 0.248 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 -108613 sc-eQTL 6.50e-02 -0.126 0.0682 0.25 CD16_Mono LOneK1K
ENSG00000029363 BCLAF1 820985 sc-eQTL 7.11e-01 0.023 0.0621 0.25 CD16_Mono LOneK1K
ENSG00000112357 PEX7 288272 sc-eQTL 6.26e-01 -0.0506 0.104 0.25 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 9.45e-01 0.00444 0.0642 0.25 CD16_Mono LOneK1K
ENSG00000135525 MAP7 560017 sc-eQTL 4.19e-01 0.0811 0.1 0.25 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 318359 sc-eQTL 9.72e-01 0.00294 0.0824 0.25 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 5.93e-01 0.046 0.086 0.25 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 326791 sc-eQTL 3.14e-01 0.0984 0.0975 0.25 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 -108613 sc-eQTL 6.19e-01 -0.0325 0.0654 0.25 NK_CD56dim LOneK1K
ENSG00000029363 BCLAF1 820985 sc-eQTL 5.39e-01 0.0233 0.0379 0.25 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 288272 sc-eQTL 5.84e-01 0.0604 0.11 0.25 NK_CD56dim LOneK1K
ENSG00000112378 PERP -996583 sc-eQTL 1.34e-01 0.102 0.0681 0.25 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -756378 sc-eQTL 9.23e-01 0.0058 0.0596 0.25 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 318359 sc-eQTL 8.67e-01 0.0135 0.0805 0.25 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -757397 sc-eQTL 8.84e-01 -0.0121 0.0834 0.25 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000027697 IFNGR1 -108613 pQTL 0.00103 -0.0619 0.0188 0.0 0.0 0.206
ENSG00000027697 IFNGR1 -108613 eQTL 0.000614 -0.0569 0.0166 0.0 0.0 0.2
ENSG00000182747 SLC35D3 188535 eQTL 0.00169 0.12 0.0382 0.0 0.0 0.2

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 IFNGR1 -108613 4.49e-06 4.94e-06 8.35e-07 2.79e-06 1.59e-06 1.57e-06 4.62e-06 9.99e-07 5.14e-06 2.41e-06 5.25e-06 3.33e-06 6.97e-06 2.49e-06 1.45e-06 3.38e-06 1.78e-06 3.52e-06 1.5e-06 1.09e-06 3.1e-06 4.91e-06 4.64e-06 1.48e-06 6.47e-06 1.97e-06 2.51e-06 1.84e-06 4.45e-06 4.23e-06 2.81e-06 5.42e-07 5.05e-07 1.54e-06 2.19e-06 9.58e-07 9.28e-07 4.56e-07 8.13e-07 4.07e-07 7.52e-07 5.74e-06 3.82e-07 1.51e-07 6.09e-07 9.66e-07 9.89e-07 5.21e-07 3.29e-07
ENSG00000220412 \N -596365 3.1e-07 1.76e-07 6.72e-08 2.28e-07 1.02e-07 8.85e-08 2.86e-07 6.57e-08 1.89e-07 1.11e-07 2.04e-07 1.48e-07 2.45e-07 8.55e-08 6.53e-08 9.35e-08 6.63e-08 2.15e-07 7.53e-08 6.29e-08 1.34e-07 1.9e-07 1.86e-07 3.27e-08 2.48e-07 1.71e-07 1.25e-07 1.47e-07 1.48e-07 1.69e-07 1.26e-07 5.08e-08 4.86e-08 1.02e-07 5.5e-08 3.3e-08 6.24e-08 5.36e-08 4.75e-08 7.92e-08 4.84e-08 1.68e-07 3.53e-08 1.97e-08 6.21e-08 9.65e-09 9.26e-08 0.0 4.68e-08