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Genes within 1Mb (chr6:137702105:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 482656 sc-eQTL 9.54e-01 0.00792 0.138 0.925 B L1
ENSG00000051620 HEBP2 -701426 sc-eQTL 2.86e-01 0.115 0.108 0.925 B L1
ENSG00000112357 PEX7 879541 sc-eQTL 6.73e-01 -0.0688 0.163 0.925 B L1
ENSG00000112378 PERP -405314 sc-eQTL 5.15e-01 -0.0703 0.108 0.925 B L1
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 2.60e-02 -0.192 0.0859 0.925 B L1
ENSG00000197442 MAP3K5 909628 sc-eQTL 8.31e-01 -0.0259 0.121 0.925 B L1
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 9.28e-01 0.0124 0.137 0.925 B L1
ENSG00000027697 IFNGR1 482656 sc-eQTL 5.41e-01 -0.0551 0.0899 0.925 CD4T L1
ENSG00000051620 HEBP2 -701426 sc-eQTL 7.18e-02 0.185 0.102 0.925 CD4T L1
ENSG00000112357 PEX7 879541 sc-eQTL 5.71e-01 -0.0822 0.145 0.925 CD4T L1
ENSG00000112378 PERP -405314 sc-eQTL 2.27e-03 0.294 0.0952 0.925 CD4T L1
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 2.72e-01 -0.1 0.0909 0.925 CD4T L1
ENSG00000197442 MAP3K5 909628 sc-eQTL 2.18e-01 0.0855 0.0692 0.925 CD4T L1
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 2.48e-01 0.133 0.114 0.925 CD4T L1
ENSG00000027697 IFNGR1 482656 sc-eQTL 4.15e-01 -0.0853 0.104 0.925 CD8T L1
ENSG00000051620 HEBP2 -701426 sc-eQTL 5.96e-02 0.21 0.111 0.925 CD8T L1
ENSG00000112357 PEX7 879541 sc-eQTL 8.72e-01 0.0281 0.175 0.925 CD8T L1
ENSG00000112378 PERP -405314 sc-eQTL 9.76e-01 -0.00347 0.114 0.925 CD8T L1
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 5.95e-02 -0.165 0.0873 0.925 CD8T L1
ENSG00000197442 MAP3K5 909628 sc-eQTL 7.07e-01 -0.035 0.093 0.925 CD8T L1
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 1.95e-01 0.168 0.129 0.925 CD8T L1
ENSG00000027697 IFNGR1 482656 sc-eQTL 5.58e-01 -0.0743 0.126 0.923 DC L1
ENSG00000051620 HEBP2 -701426 sc-eQTL 2.33e-02 0.271 0.118 0.923 DC L1
ENSG00000112357 PEX7 879541 sc-eQTL 3.31e-01 0.173 0.178 0.923 DC L1
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 7.47e-01 -0.0437 0.135 0.923 DC L1
ENSG00000135540 NHSL1 -990466 sc-eQTL 7.05e-01 -0.0594 0.156 0.923 DC L1
ENSG00000197442 MAP3K5 909628 sc-eQTL 6.55e-01 -0.0627 0.14 0.923 DC L1
ENSG00000225177 AL590617.2 -990443 sc-eQTL 3.05e-01 0.168 0.163 0.923 DC L1
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 6.17e-01 0.0691 0.138 0.923 DC L1
ENSG00000286646 AL121933.2 918060 sc-eQTL 1.93e-01 0.238 0.182 0.923 DC L1
ENSG00000027697 IFNGR1 482656 sc-eQTL 2.23e-01 -0.129 0.105 0.925 Mono L1
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.13e-01 0.136 0.0852 0.925 Mono L1
ENSG00000112357 PEX7 879541 sc-eQTL 5.59e-01 -0.104 0.178 0.925 Mono L1
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 9.33e-02 -0.15 0.089 0.925 Mono L1
ENSG00000135540 NHSL1 -990466 sc-eQTL 8.70e-01 -0.0264 0.162 0.925 Mono L1
ENSG00000197442 MAP3K5 909628 sc-eQTL 9.18e-01 0.0107 0.105 0.925 Mono L1
ENSG00000225177 AL590617.2 -990443 sc-eQTL 1.32e-01 0.253 0.167 0.925 Mono L1
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 1.62e-01 -0.155 0.11 0.925 Mono L1
ENSG00000286646 AL121933.2 918060 sc-eQTL 6.12e-01 0.0642 0.127 0.925 Mono L1
ENSG00000027697 IFNGR1 482656 sc-eQTL 2.10e-01 -0.145 0.115 0.925 NK L1
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.38e-01 0.196 0.132 0.925 NK L1
ENSG00000112357 PEX7 879541 sc-eQTL 5.02e-01 0.12 0.178 0.925 NK L1
ENSG00000112378 PERP -405314 sc-eQTL 6.97e-01 -0.0437 0.112 0.925 NK L1
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 1.44e-03 -0.303 0.0938 0.925 NK L1
ENSG00000197442 MAP3K5 909628 sc-eQTL 2.93e-01 -0.145 0.137 0.925 NK L1
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 6.06e-01 -0.0702 0.136 0.925 NK L1
ENSG00000027697 IFNGR1 482656 sc-eQTL 5.40e-02 -0.205 0.106 0.925 Other_T L1
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.01e-02 0.289 0.111 0.925 Other_T L1
ENSG00000112357 PEX7 879541 sc-eQTL 2.26e-01 0.211 0.174 0.925 Other_T L1
ENSG00000112378 PERP -405314 sc-eQTL 3.22e-01 -0.138 0.139 0.925 Other_T L1
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 4.33e-03 -0.188 0.0652 0.925 Other_T L1
ENSG00000197442 MAP3K5 909628 sc-eQTL 8.14e-02 -0.223 0.127 0.925 Other_T L1
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 5.63e-01 -0.0764 0.132 0.925 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 482656 sc-eQTL 6.78e-01 0.075 0.18 0.926 B_Activated L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 8.86e-01 -0.0253 0.177 0.926 B_Activated L2
ENSG00000112357 PEX7 879541 sc-eQTL 6.18e-02 0.33 0.176 0.926 B_Activated L2
ENSG00000112378 PERP -405314 sc-eQTL 3.13e-01 0.0927 0.0916 0.926 B_Activated L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 5.66e-01 -0.102 0.178 0.926 B_Activated L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 9.20e-01 0.0201 0.199 0.926 B_Activated L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 8.12e-01 0.037 0.156 0.926 B_Activated L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 3.37e-01 0.152 0.158 0.925 B_Intermediate L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.83e-01 0.158 0.118 0.925 B_Intermediate L2
ENSG00000112357 PEX7 879541 sc-eQTL 6.52e-01 0.0747 0.166 0.925 B_Intermediate L2
ENSG00000112378 PERP -405314 sc-eQTL 8.28e-01 -0.0329 0.151 0.925 B_Intermediate L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 9.75e-02 -0.196 0.118 0.925 B_Intermediate L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 8.78e-01 -0.022 0.143 0.925 B_Intermediate L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 2.63e-01 -0.188 0.168 0.925 B_Intermediate L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 7.19e-01 0.0618 0.172 0.925 B_Memory L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.04e-01 0.212 0.13 0.925 B_Memory L2
ENSG00000112357 PEX7 879541 sc-eQTL 7.54e-01 0.0543 0.173 0.925 B_Memory L2
ENSG00000112378 PERP -405314 sc-eQTL 4.18e-01 -0.132 0.163 0.925 B_Memory L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 3.40e-02 -0.237 0.111 0.925 B_Memory L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 7.70e-01 0.0449 0.153 0.925 B_Memory L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 1.01e-01 -0.273 0.166 0.925 B_Memory L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 9.70e-01 -0.00517 0.137 0.925 B_Naive1 L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.65e-01 0.161 0.116 0.925 B_Naive1 L2
ENSG00000112357 PEX7 879541 sc-eQTL 5.45e-01 -0.109 0.18 0.925 B_Naive1 L2
ENSG00000112378 PERP -405314 sc-eQTL 5.50e-01 -0.0946 0.158 0.925 B_Naive1 L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 5.64e-03 -0.252 0.09 0.925 B_Naive1 L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 4.94e-01 0.0881 0.129 0.925 B_Naive1 L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 5.45e-01 -0.087 0.143 0.925 B_Naive1 L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 5.77e-01 0.0931 0.167 0.925 B_Naive2 L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 8.77e-01 0.0171 0.111 0.925 B_Naive2 L2
ENSG00000112357 PEX7 879541 sc-eQTL 7.29e-01 0.0633 0.183 0.925 B_Naive2 L2
ENSG00000112378 PERP -405314 sc-eQTL 4.52e-01 0.1 0.133 0.925 B_Naive2 L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 1.26e-01 -0.203 0.132 0.925 B_Naive2 L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 1.31e-01 -0.213 0.141 0.925 B_Naive2 L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 4.53e-01 0.129 0.172 0.925 B_Naive2 L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 8.61e-01 -0.0277 0.158 0.925 CD4_CTL L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 5.54e-02 0.278 0.145 0.925 CD4_CTL L2
ENSG00000112357 PEX7 879541 sc-eQTL 3.21e-02 0.374 0.173 0.925 CD4_CTL L2
ENSG00000112378 PERP -405314 sc-eQTL 1.69e-01 0.244 0.177 0.925 CD4_CTL L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 1.58e-02 -0.249 0.102 0.925 CD4_CTL L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 5.07e-01 -0.11 0.165 0.925 CD4_CTL L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 2.02e-01 0.206 0.161 0.925 CD4_CTL L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 6.85e-01 -0.0346 0.0853 0.925 CD4_Naive L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.85e-02 0.236 0.0993 0.925 CD4_Naive L2
ENSG00000112357 PEX7 879541 sc-eQTL 2.64e-01 -0.18 0.161 0.925 CD4_Naive L2
ENSG00000112378 PERP -405314 sc-eQTL 2.87e-02 0.289 0.131 0.925 CD4_Naive L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 4.38e-01 -0.0724 0.0931 0.925 CD4_Naive L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 2.39e-02 0.154 0.0676 0.925 CD4_Naive L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 1.83e-01 0.16 0.12 0.925 CD4_Naive L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 4.76e-01 -0.0847 0.119 0.925 CD4_TCM L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 4.73e-01 0.0843 0.117 0.925 CD4_TCM L2
ENSG00000112357 PEX7 879541 sc-eQTL 7.38e-01 -0.0584 0.174 0.925 CD4_TCM L2
ENSG00000112378 PERP -405314 sc-eQTL 2.11e-01 0.184 0.147 0.925 CD4_TCM L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 1.01e-01 -0.14 0.085 0.925 CD4_TCM L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 9.47e-01 -0.0065 0.0974 0.925 CD4_TCM L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 7.08e-02 0.216 0.119 0.925 CD4_TCM L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 5.63e-01 -0.0783 0.135 0.925 CD4_TEM L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.81e-02 0.286 0.12 0.925 CD4_TEM L2
ENSG00000112357 PEX7 879541 sc-eQTL 6.99e-01 -0.0675 0.175 0.925 CD4_TEM L2
ENSG00000112378 PERP -405314 sc-eQTL 1.47e-01 0.205 0.141 0.925 CD4_TEM L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 1.10e-02 -0.227 0.0886 0.925 CD4_TEM L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 2.53e-01 -0.159 0.138 0.925 CD4_TEM L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 4.73e-01 0.104 0.144 0.925 CD4_TEM L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 2.23e-02 -0.287 0.125 0.925 CD8_CTL L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 3.01e-01 0.138 0.133 0.925 CD8_CTL L2
ENSG00000112357 PEX7 879541 sc-eQTL 1.71e-01 -0.237 0.173 0.925 CD8_CTL L2
ENSG00000112378 PERP -405314 sc-eQTL 3.22e-01 -0.165 0.166 0.925 CD8_CTL L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 2.48e-03 -0.318 0.104 0.925 CD8_CTL L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 7.33e-01 -0.0511 0.15 0.925 CD8_CTL L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 2.76e-01 -0.162 0.149 0.925 CD8_CTL L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 4.29e-01 0.0956 0.121 0.925 CD8_Naive L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.37e-01 0.165 0.11 0.925 CD8_Naive L2
ENSG00000112357 PEX7 879541 sc-eQTL 3.58e-02 0.366 0.173 0.925 CD8_Naive L2
ENSG00000112378 PERP -405314 sc-eQTL 5.21e-01 -0.0855 0.133 0.925 CD8_Naive L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 3.04e-01 -0.0971 0.0943 0.925 CD8_Naive L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 9.21e-01 0.0111 0.112 0.925 CD8_Naive L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 1.13e-01 0.221 0.139 0.925 CD8_Naive L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 3.52e-01 0.149 0.159 0.924 CD8_TCM L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 5.59e-01 -0.0796 0.136 0.924 CD8_TCM L2
ENSG00000112357 PEX7 879541 sc-eQTL 2.64e-01 0.205 0.183 0.924 CD8_TCM L2
ENSG00000112378 PERP -405314 sc-eQTL 7.43e-01 0.0588 0.179 0.924 CD8_TCM L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 6.82e-02 -0.157 0.0858 0.924 CD8_TCM L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 3.39e-01 -0.148 0.154 0.924 CD8_TCM L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 9.04e-02 0.268 0.157 0.924 CD8_TCM L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 7.33e-01 0.0541 0.158 0.927 CD8_TEM L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.14e-02 0.417 0.163 0.927 CD8_TEM L2
ENSG00000112357 PEX7 879541 sc-eQTL 2.38e-01 -0.215 0.181 0.927 CD8_TEM L2
ENSG00000112378 PERP -405314 sc-eQTL 7.32e-01 -0.0649 0.189 0.927 CD8_TEM L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 2.89e-02 -0.253 0.115 0.927 CD8_TEM L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 6.22e-01 0.089 0.18 0.927 CD8_TEM L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 7.71e-01 0.0503 0.173 0.927 CD8_TEM L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 4.85e-01 -0.0862 0.123 0.926 MAIT L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.37e-02 0.323 0.13 0.926 MAIT L2
ENSG00000112357 PEX7 879541 sc-eQTL 8.31e-01 0.0358 0.167 0.926 MAIT L2
ENSG00000112378 PERP -405314 sc-eQTL 7.68e-01 0.0516 0.174 0.926 MAIT L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 6.47e-03 -0.224 0.0815 0.926 MAIT L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 5.75e-01 -0.0811 0.144 0.926 MAIT L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 4.59e-01 -0.114 0.153 0.926 MAIT L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 1.63e-01 -0.189 0.135 0.924 NK_CD56bright L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 5.84e-01 -0.0812 0.148 0.924 NK_CD56bright L2
ENSG00000112357 PEX7 879541 sc-eQTL 5.20e-01 0.114 0.177 0.924 NK_CD56bright L2
ENSG00000112378 PERP -405314 sc-eQTL 9.77e-01 -0.00453 0.159 0.924 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 2.63e-01 -0.113 0.101 0.924 NK_CD56bright L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 2.23e-01 -0.187 0.153 0.924 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 7.21e-01 -0.0577 0.161 0.924 NK_CD56bright L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 4.17e-02 -0.216 0.106 0.927 NK_CD56dim L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.30e-01 0.218 0.143 0.927 NK_CD56dim L2
ENSG00000112357 PEX7 879541 sc-eQTL 9.57e-01 -0.00993 0.184 0.927 NK_CD56dim L2
ENSG00000112378 PERP -405314 sc-eQTL 8.12e-01 -0.0307 0.129 0.927 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 2.35e-03 -0.303 0.0983 0.927 NK_CD56dim L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 7.67e-01 -0.0429 0.145 0.927 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 3.13e-01 -0.152 0.15 0.927 NK_CD56dim L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 1.88e-02 -0.319 0.135 0.925 NK_HLA L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 3.50e-01 0.148 0.158 0.925 NK_HLA L2
ENSG00000112357 PEX7 879541 sc-eQTL 8.90e-01 -0.0241 0.174 0.925 NK_HLA L2
ENSG00000112378 PERP -405314 sc-eQTL 6.52e-01 -0.0635 0.141 0.925 NK_HLA L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 1.61e-03 -0.338 0.106 0.925 NK_HLA L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 9.54e-01 0.01 0.172 0.925 NK_HLA L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 8.09e-01 -0.0423 0.175 0.925 NK_HLA L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 1.33e-01 -0.168 0.112 0.927 NK_cytokine L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 2.72e-01 0.158 0.143 0.927 NK_cytokine L2
ENSG00000112357 PEX7 879541 sc-eQTL 6.41e-01 0.0823 0.176 0.927 NK_cytokine L2
ENSG00000112378 PERP -405314 sc-eQTL 4.48e-01 -0.101 0.134 0.927 NK_cytokine L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 1.05e-04 -0.382 0.0967 0.927 NK_cytokine L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 2.98e-01 -0.143 0.137 0.927 NK_cytokine L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 8.52e-01 -0.0283 0.151 0.927 NK_cytokine L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 7.52e-01 0.0675 0.213 0.915 PB L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 6.56e-01 0.0801 0.179 0.915 PB L2
ENSG00000112357 PEX7 879541 sc-eQTL 1.42e-01 0.321 0.217 0.915 PB L2
ENSG00000112378 PERP -405314 sc-eQTL 7.81e-01 0.038 0.137 0.915 PB L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 7.33e-01 0.0567 0.166 0.915 PB L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 4.76e-01 0.135 0.188 0.915 PB L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 7.74e-01 0.0573 0.199 0.915 PB L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 8.33e-01 0.0306 0.145 0.928 Pro_T L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.66e-02 0.361 0.149 0.928 Pro_T L2
ENSG00000112357 PEX7 879541 sc-eQTL 6.43e-01 0.0816 0.176 0.928 Pro_T L2
ENSG00000112378 PERP -405314 sc-eQTL 2.61e-01 0.157 0.139 0.928 Pro_T L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 5.79e-01 -0.049 0.0882 0.928 Pro_T L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 5.42e-01 -0.104 0.171 0.928 Pro_T L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 8.24e-02 0.297 0.17 0.928 Pro_T L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 6.12e-01 0.082 0.162 0.925 Treg L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.26e-01 0.179 0.117 0.925 Treg L2
ENSG00000112357 PEX7 879541 sc-eQTL 7.30e-01 0.0589 0.171 0.925 Treg L2
ENSG00000112378 PERP -405314 sc-eQTL 9.00e-02 0.312 0.183 0.925 Treg L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 3.97e-04 -0.359 0.0997 0.925 Treg L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 2.74e-02 0.244 0.11 0.925 Treg L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 1.11e-01 -0.249 0.156 0.925 Treg L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 3.95e-01 -0.121 0.142 0.927 cDC L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 5.77e-01 0.0699 0.125 0.927 cDC L2
ENSG00000112357 PEX7 879541 sc-eQTL 1.50e-01 0.264 0.183 0.927 cDC L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 7.32e-01 0.0481 0.14 0.927 cDC L2
ENSG00000135540 NHSL1 -990466 sc-eQTL 7.82e-01 -0.0449 0.162 0.927 cDC L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 6.87e-01 -0.0582 0.144 0.927 cDC L2
ENSG00000225177 AL590617.2 -990443 sc-eQTL 3.85e-01 0.156 0.179 0.927 cDC L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 4.90e-01 0.126 0.182 0.927 cDC L2
ENSG00000286646 AL121933.2 918060 sc-eQTL 2.72e-01 0.206 0.187 0.927 cDC L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 2.10e-01 -0.123 0.0976 0.925 cMono_IL1B L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.65e-01 0.134 0.0961 0.925 cMono_IL1B L2
ENSG00000112357 PEX7 879541 sc-eQTL 7.14e-01 -0.0647 0.176 0.925 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 2.71e-01 -0.116 0.105 0.925 cMono_IL1B L2
ENSG00000135540 NHSL1 -990466 sc-eQTL 5.51e-01 -0.0966 0.162 0.925 cMono_IL1B L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 1.43e-01 0.16 0.109 0.925 cMono_IL1B L2
ENSG00000225177 AL590617.2 -990443 sc-eQTL 1.86e-01 0.224 0.169 0.925 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 1.14e-01 -0.178 0.112 0.925 cMono_IL1B L2
ENSG00000286646 AL121933.2 918060 sc-eQTL 7.54e-01 0.0443 0.141 0.925 cMono_IL1B L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 6.59e-01 -0.0503 0.114 0.925 cMono_S100A L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 6.16e-01 0.0532 0.106 0.925 cMono_S100A L2
ENSG00000112357 PEX7 879541 sc-eQTL 3.06e-01 -0.187 0.182 0.925 cMono_S100A L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 5.30e-01 -0.0636 0.101 0.925 cMono_S100A L2
ENSG00000135540 NHSL1 -990466 sc-eQTL 6.04e-01 0.0861 0.166 0.925 cMono_S100A L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 1.64e-01 -0.191 0.137 0.925 cMono_S100A L2
ENSG00000225177 AL590617.2 -990443 sc-eQTL 6.32e-01 0.0871 0.182 0.925 cMono_S100A L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 7.67e-01 -0.0431 0.145 0.925 cMono_S100A L2
ENSG00000286646 AL121933.2 918060 sc-eQTL 9.11e-01 0.016 0.142 0.925 cMono_S100A L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 2.36e-02 -0.358 0.157 0.918 gdT L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.59e-02 0.454 0.186 0.918 gdT L2
ENSG00000112357 PEX7 879541 sc-eQTL 5.82e-01 0.111 0.202 0.918 gdT L2
ENSG00000112378 PERP -405314 sc-eQTL 5.90e-01 -0.0951 0.176 0.918 gdT L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 2.38e-01 -0.116 0.0976 0.918 gdT L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 8.36e-02 -0.358 0.205 0.918 gdT L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 1.00e+00 2.94e-05 0.178 0.918 gdT L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 2.21e-01 0.147 0.12 0.924 intMono L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 2.47e-01 0.139 0.119 0.924 intMono L2
ENSG00000112357 PEX7 879541 sc-eQTL 5.76e-02 0.306 0.16 0.924 intMono L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 2.66e-02 -0.229 0.102 0.924 intMono L2
ENSG00000135540 NHSL1 -990466 sc-eQTL 3.71e-01 0.144 0.161 0.924 intMono L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 2.79e-02 -0.369 0.167 0.924 intMono L2
ENSG00000225177 AL590617.2 -990443 sc-eQTL 1.75e-01 0.245 0.18 0.924 intMono L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 1.05e-01 -0.25 0.153 0.924 intMono L2
ENSG00000286646 AL121933.2 918060 sc-eQTL 4.37e-01 0.138 0.178 0.924 intMono L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 1.40e-01 -0.213 0.144 0.925 ncMono L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.32e-02 0.249 0.0996 0.925 ncMono L2
ENSG00000112357 PEX7 879541 sc-eQTL 3.53e-01 -0.166 0.178 0.925 ncMono L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 5.84e-01 -0.07 0.128 0.925 ncMono L2
ENSG00000135540 NHSL1 -990466 sc-eQTL 7.01e-01 -0.0625 0.163 0.925 ncMono L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 7.01e-01 0.0637 0.166 0.925 ncMono L2
ENSG00000225177 AL590617.2 -990443 sc-eQTL 8.33e-01 0.0381 0.181 0.925 ncMono L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 6.43e-01 0.074 0.16 0.925 ncMono L2
ENSG00000286646 AL121933.2 918060 sc-eQTL 1.79e-01 0.226 0.168 0.925 ncMono L2
ENSG00000027697 IFNGR1 482656 sc-eQTL 3.76e-01 -0.137 0.155 0.918 pDC L2
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.16e-02 0.356 0.139 0.918 pDC L2
ENSG00000112357 PEX7 879541 sc-eQTL 2.32e-01 -0.204 0.17 0.918 pDC L2
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 7.84e-02 -0.253 0.143 0.918 pDC L2
ENSG00000135540 NHSL1 -990466 sc-eQTL 4.28e-01 0.112 0.141 0.918 pDC L2
ENSG00000197442 MAP3K5 909628 sc-eQTL 9.82e-02 -0.315 0.189 0.918 pDC L2
ENSG00000225177 AL590617.2 -990443 sc-eQTL 2.70e-01 0.157 0.142 0.918 pDC L2
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 8.28e-01 0.0317 0.146 0.918 pDC L2
ENSG00000286646 AL121933.2 918060 sc-eQTL 1.23e-01 0.271 0.175 0.918 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000027697 IFNGR1 482656 sc-eQTL 4.95e-01 0.0965 0.141 0.925 B_Memory LOneK1K
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.62e-01 0.16 0.114 0.925 B_Memory LOneK1K
ENSG00000112357 PEX7 879541 sc-eQTL 4.17e-01 0.132 0.162 0.925 B_Memory LOneK1K
ENSG00000112378 PERP -405314 sc-eQTL 5.73e-01 -0.0851 0.151 0.925 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 2.24e-01 -0.121 0.0993 0.925 B_Memory LOneK1K
ENSG00000197442 MAP3K5 909628 sc-eQTL 8.50e-01 0.025 0.132 0.925 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 2.74e-01 -0.184 0.168 0.925 B_Memory LOneK1K
ENSG00000027697 IFNGR1 482656 sc-eQTL 5.62e-01 0.0837 0.144 0.925 B_Naive LOneK1K
ENSG00000051620 HEBP2 -701426 sc-eQTL 3.50e-01 0.1 0.107 0.925 B_Naive LOneK1K
ENSG00000112357 PEX7 879541 sc-eQTL 7.94e-01 -0.0459 0.176 0.925 B_Naive LOneK1K
ENSG00000112378 PERP -405314 sc-eQTL 7.39e-01 -0.0525 0.157 0.925 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 2.07e-02 -0.19 0.0816 0.925 B_Naive LOneK1K
ENSG00000197442 MAP3K5 909628 sc-eQTL 6.38e-01 -0.0571 0.121 0.925 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 9.20e-01 -0.0147 0.147 0.925 B_Naive LOneK1K
ENSG00000027697 IFNGR1 482656 sc-eQTL 1.98e-01 -0.128 0.0988 0.925 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -701426 sc-eQTL 1.17e-01 0.145 0.0923 0.925 CD14_Mono LOneK1K
ENSG00000112357 PEX7 879541 sc-eQTL 5.79e-01 -0.099 0.178 0.925 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 3.36e-01 -0.0882 0.0915 0.925 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -990466 sc-eQTL 9.20e-01 -0.0165 0.163 0.925 CD14_Mono LOneK1K
ENSG00000197442 MAP3K5 909628 sc-eQTL 6.21e-01 0.0533 0.107 0.925 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -990443 sc-eQTL 2.74e-01 0.192 0.175 0.925 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 1.44e-01 -0.16 0.109 0.925 CD14_Mono LOneK1K
ENSG00000286646 AL121933.2 918060 sc-eQTL 6.09e-01 0.0654 0.128 0.925 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 482656 sc-eQTL 9.66e-01 0.00495 0.116 0.925 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -701426 sc-eQTL 4.97e-02 0.174 0.088 0.925 CD16_Mono LOneK1K
ENSG00000112357 PEX7 879541 sc-eQTL 5.07e-01 0.117 0.176 0.925 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 4.19e-02 -0.22 0.108 0.925 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -990466 sc-eQTL 7.82e-01 0.0437 0.158 0.925 CD16_Mono LOneK1K
ENSG00000197442 MAP3K5 909628 sc-eQTL 6.32e-01 -0.0668 0.139 0.925 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -990443 sc-eQTL 5.58e-01 0.102 0.174 0.925 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 5.96e-02 -0.274 0.145 0.925 CD16_Mono LOneK1K
ENSG00000286646 AL121933.2 918060 sc-eQTL 1.06e-01 0.267 0.164 0.925 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 482656 sc-eQTL 1.34e-01 -0.163 0.108 0.927 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -701426 sc-eQTL 9.98e-02 0.222 0.134 0.927 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 879541 sc-eQTL 6.18e-01 0.0916 0.184 0.927 NK_CD56dim LOneK1K
ENSG00000112378 PERP -405314 sc-eQTL 8.52e-01 -0.0213 0.114 0.927 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -165109 sc-eQTL 6.47e-04 -0.334 0.0965 0.927 NK_CD56dim LOneK1K
ENSG00000197442 MAP3K5 909628 sc-eQTL 3.63e-01 -0.122 0.134 0.927 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -166128 sc-eQTL 4.54e-01 -0.104 0.139 0.927 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000226004 AL591468.1 -243697 eQTL 0.0247 0.13 0.0577 0.0 0.0 0.0368

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000051620 \N -701426 4.37e-07 9.39e-07 8.55e-08 3.22e-07 1.05e-07 1.26e-07 5.13e-07 1.56e-07 1.11e-06 2.87e-07 1.88e-06 8.37e-07 1.76e-06 3.24e-07 3.12e-07 1.76e-07 3.35e-07 3.44e-07 7.29e-08 6.03e-08 1.6e-07 5.2e-07 2.48e-07 4.15e-08 1.39e-06 1.23e-07 1.87e-07 3.78e-07 2.31e-07 2.75e-07 8.51e-07 3.1e-08 4.34e-08 1.4e-07 3.27e-07 5.14e-08 6.24e-08 8.51e-08 4.82e-08 7.39e-08 5.36e-08 7.04e-07 5.91e-08 3.25e-08 3.07e-08 7.03e-08 1.21e-07 1.13e-08 5.04e-08
ENSG00000112357 \N 879541 3.07e-07 8.69e-07 6.45e-08 3.87e-07 1.01e-07 8.89e-08 3.25e-07 7.98e-08 4.74e-07 1.7e-07 1.22e-06 5.82e-07 1.05e-06 2.55e-07 1.5e-07 1.01e-07 8.53e-08 2.33e-07 6.32e-08 4.89e-08 1.24e-07 2.76e-07 1.69e-07 2.68e-08 6.59e-07 1.14e-07 1.31e-07 1.97e-07 1.34e-07 1.33e-07 5.48e-07 3.87e-08 3.13e-08 1.17e-07 3.38e-07 2.74e-08 4.41e-08 8.63e-08 6.35e-08 7.04e-08 5.33e-08 3.26e-07 2.67e-08 2.4e-08 4.25e-08 1.52e-08 1.19e-07 2.85e-09 4.81e-08
ENSG00000118503 \N -165109 3.55e-06 1.67e-05 3.6e-07 3.34e-06 4.65e-07 8.48e-07 3.65e-06 1.25e-06 8.33e-06 2.97e-06 1.84e-05 7.7e-06 1.14e-05 5.19e-06 1.31e-06 2.43e-06 1.81e-06 3.22e-06 5.86e-07 5.88e-07 1.37e-06 5.51e-06 3.21e-06 9.8e-07 8.54e-06 1.2e-06 1.8e-06 1.75e-06 3.88e-06 2.95e-06 1.29e-05 1.57e-07 3.78e-07 1.21e-06 1.96e-06 5.92e-07 5.53e-07 2.39e-07 9.27e-07 2.03e-07 2.82e-07 5.62e-06 4.47e-07 1.17e-08 2.86e-07 5.34e-07 2.23e-07 1.49e-07 6.51e-08