Genes within 1Mb (chr1:51769069:T:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000078618 NRDC -109868 eQTL 7.30e-06 0.0471 0.0104 0.0 0.0 0.161
ENSG00000085831 TTC39A 423953 eQTL 4.54e-02 0.0655 0.0327 0.00139 0.0 0.161
ENSG00000116157 GPX7 -833302 eQTL 1.23e-09 -0.203 0.0331 0.0 0.0 0.161
ENSG00000117859 OSBPL9 191890 eQTL 3.07e-20 -0.166 0.0176 0.0 0.0 0.161
ENSG00000154222 CC2D1B -597124 eQTL 2.80e-11 -0.156 0.0232 0.0 0.0 0.161
ENSG00000198841 KTI12 -264747 eQTL 1.88e-02 0.0535 0.0227 0.0 0.0 0.161
ENSG00000228407 AL139156.2 -391531 eQTL 7.89e-02 -0.0638 0.0362 0.00101 0.0 0.161
ENSG00000232846 SLC25A6P3 60007 eQTL 2.92e-02 -0.0855 0.0391 0.0 0.0 0.161
ENSG00000266993 AL050343.1 -24865 eQTL 2.29e-02 0.0668 0.0293 0.0 0.0 0.161


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000078618 NRDC -109868 2.1e-05 2.87e-05 3.06e-06 1.35e-05 2.98e-06 1.03e-05 2.6e-05 3.72e-06 2.44e-05 1.02e-05 3.05e-05 1.2e-05 4.07e-05 1.12e-05 5.14e-06 1.05e-05 1.22e-05 1.75e-05 4.95e-06 4.89e-06 9.03e-06 2.02e-05 2e-05 5.06e-06 3.13e-05 5.5e-06 8.52e-06 8.17e-06 1.8e-05 1.6e-05 1.36e-05 1.31e-06 1.57e-06 4.56e-06 9.92e-06 4.2e-06 2.37e-06 2.7e-06 3.63e-06 2.6e-06 1.29e-06 2.9e-05 2.68e-06 2.71e-07 9.9e-07 2.67e-06 2.9e-06 1.29e-06 1.01e-06
ENSG00000085840 \N -635354 5.52e-06 6.73e-06 7.57e-07 3.92e-06 1.2e-06 1.57e-06 7.3e-06 9.79e-07 4.84e-06 2.95e-06 8.17e-06 3.54e-06 1.06e-05 3.17e-06 1.01e-06 2.96e-06 1.96e-06 3.72e-06 1.45e-06 1.51e-06 3.07e-06 4.73e-06 4.66e-06 1.65e-06 8.24e-06 1.35e-06 2.49e-06 1.82e-06 4.45e-06 3.81e-06 3.29e-06 5.77e-07 7.91e-07 1.59e-06 3.15e-06 1.18e-06 1.07e-06 4.36e-07 9.06e-07 3.8e-07 4.03e-07 8.29e-06 8.18e-07 1.65e-07 3.58e-07 1.63e-06 1.03e-06 7.36e-07 4.38e-07
ENSG00000116157 GPX7 -833302 4.62e-06 4.81e-06 6.9e-07 3.09e-06 4.79e-07 1.19e-06 3.48e-06 8.27e-07 3.53e-06 1.7e-06 4.91e-06 1.86e-06 7.06e-06 2.11e-06 1.45e-06 1.96e-06 1.57e-06 3.22e-06 1.33e-06 9.89e-07 1.8e-06 3.92e-06 3.51e-06 1.85e-06 4.86e-06 1.36e-06 1.53e-06 1.74e-06 3.74e-06 2e-06 2.68e-06 4.38e-07 5.79e-07 1.8e-06 1.98e-06 8.95e-07 9.82e-07 4.72e-07 1.3e-06 3.79e-07 1.96e-07 5.59e-06 4.2e-07 1.64e-07 2.87e-07 9.48e-07 6.93e-07 2.39e-07 1.76e-07
ENSG00000117859 OSBPL9 191890 1.48e-05 2.22e-05 2.53e-06 1.15e-05 2.27e-06 7.76e-06 1.98e-05 3.02e-06 1.77e-05 7.65e-06 2.31e-05 8.01e-06 3.48e-05 8.55e-06 4.5e-06 8.56e-06 8.8e-06 1.32e-05 3.77e-06 4.11e-06 7e-06 1.39e-05 1.51e-05 3.99e-06 2.58e-05 4.65e-06 7.58e-06 5.97e-06 1.47e-05 1.15e-05 1.19e-05 1.16e-06 1.18e-06 3.85e-06 8.76e-06 3.58e-06 1.84e-06 2.13e-06 3.25e-06 1.74e-06 9.48e-07 2.28e-05 2.68e-06 2.22e-07 8.18e-07 2.48e-06 2.05e-06 1.06e-06 6.16e-07
ENSG00000154222 CC2D1B -597124 6.08e-06 7.76e-06 9.7e-07 4.32e-06 1.38e-06 1.91e-06 8.04e-06 1.07e-06 4.67e-06 2.82e-06 9.1e-06 3.27e-06 1.13e-05 3.61e-06 1.45e-06 3.3e-06 1.92e-06 3.8e-06 1.55e-06 1.6e-06 2.75e-06 5.42e-06 5.05e-06 1.87e-06 9.11e-06 1.48e-06 2.43e-06 1.67e-06 4.56e-06 4.07e-06 3.94e-06 7.78e-07 6.12e-07 1.93e-06 3.62e-06 1.17e-06 1.1e-06 4.82e-07 1.05e-06 4.11e-07 4.4e-07 9.44e-06 8.87e-07 1.61e-07 4.39e-07 1.62e-06 1.13e-06 6.72e-07 5.44e-07
ENSG00000232846 SLC25A6P3 60007 2.62e-05 3.08e-05 4.04e-06 1.5e-05 3.42e-06 1.26e-05 3.41e-05 4.01e-06 2.89e-05 1.23e-05 3.47e-05 1.47e-05 4.6e-05 1.26e-05 5.35e-06 1.3e-05 1.44e-05 2.06e-05 6e-06 5.52e-06 1.09e-05 2.47e-05 2.43e-05 6.27e-06 3.43e-05 5.98e-06 1.11e-05 1e-05 2.28e-05 1.88e-05 1.57e-05 1.62e-06 2.15e-06 5.65e-06 1.08e-05 4.59e-06 2.78e-06 2.81e-06 4.29e-06 3.08e-06 1.67e-06 3.22e-05 2.99e-06 2.85e-07 1.76e-06 2.81e-06 3.43e-06 1.5e-06 1.28e-06
ENSG00000266993 AL050343.1 -24865 3.12e-05 3.22e-05 4.54e-06 1.55e-05 4.49e-06 1.38e-05 4.15e-05 4.59e-06 3.18e-05 1.42e-05 3.78e-05 1.63e-05 4.95e-05 1.35e-05 5.99e-06 1.59e-05 1.58e-05 2.29e-05 6.6e-06 6.34e-06 1.34e-05 2.86e-05 2.73e-05 7.63e-06 3.73e-05 6.6e-06 1.33e-05 1.26e-05 2.73e-05 2.13e-05 1.73e-05 1.59e-06 2.45e-06 6.67e-06 1.12e-05 5.23e-06 3.1e-06 2.99e-06 4.62e-06 3.36e-06 1.7e-06 3.42e-05 3.58e-06 3.18e-07 2.03e-06 3.27e-06 3.63e-06 1.56e-06 1.52e-06