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Genes within 1Mb (chr6:137819331:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -954178 sc-eQTL 5.28e-01 -0.0884 0.14 0.929 B L1
ENSG00000027697 IFNGR1 599882 sc-eQTL 8.55e-01 -0.0249 0.136 0.929 B L1
ENSG00000051620 HEBP2 -584200 sc-eQTL 5.92e-01 -0.0573 0.107 0.929 B L1
ENSG00000112357 PEX7 996767 sc-eQTL 1.14e-01 0.254 0.16 0.929 B L1
ENSG00000112378 PERP -288088 sc-eQTL 6.94e-01 0.042 0.107 0.929 B L1
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 2.63e-01 -0.0962 0.0857 0.929 B L1
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 5.55e-02 -0.258 0.134 0.929 B L1
ENSG00000024862 CCDC28A -954178 sc-eQTL 7.58e-01 -0.048 0.156 0.929 CD4T L1
ENSG00000027697 IFNGR1 599882 sc-eQTL 4.91e-01 0.0628 0.091 0.929 CD4T L1
ENSG00000051620 HEBP2 -584200 sc-eQTL 5.56e-01 -0.0616 0.104 0.929 CD4T L1
ENSG00000112357 PEX7 996767 sc-eQTL 8.73e-02 -0.25 0.146 0.929 CD4T L1
ENSG00000112378 PERP -288088 sc-eQTL 4.85e-01 0.0687 0.0983 0.929 CD4T L1
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 1.26e-01 -0.141 0.0917 0.929 CD4T L1
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 4.09e-01 -0.0959 0.116 0.929 CD4T L1
ENSG00000024862 CCDC28A -954178 sc-eQTL 9.44e-01 0.0118 0.169 0.929 CD8T L1
ENSG00000027697 IFNGR1 599882 sc-eQTL 8.94e-01 0.0138 0.103 0.929 CD8T L1
ENSG00000051620 HEBP2 -584200 sc-eQTL 7.16e-01 -0.0403 0.111 0.929 CD8T L1
ENSG00000112357 PEX7 996767 sc-eQTL 4.16e-01 0.14 0.172 0.929 CD8T L1
ENSG00000112378 PERP -288088 sc-eQTL 9.17e-01 0.0118 0.113 0.929 CD8T L1
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 1.72e-02 -0.206 0.0859 0.929 CD8T L1
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 5.55e-04 -0.436 0.124 0.929 CD8T L1
ENSG00000024862 CCDC28A -954178 sc-eQTL 4.68e-02 -0.343 0.172 0.93 DC L1
ENSG00000027697 IFNGR1 599882 sc-eQTL 1.48e-01 0.186 0.128 0.93 DC L1
ENSG00000051620 HEBP2 -584200 sc-eQTL 6.48e-01 0.0558 0.122 0.93 DC L1
ENSG00000112357 PEX7 996767 sc-eQTL 8.22e-01 -0.0409 0.181 0.93 DC L1
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 6.23e-01 0.0676 0.137 0.93 DC L1
ENSG00000135540 NHSL1 -873240 sc-eQTL 9.65e-01 0.00696 0.159 0.93 DC L1
ENSG00000225177 AL590617.2 -873217 sc-eQTL 9.81e-01 -0.00403 0.166 0.93 DC L1
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 8.26e-01 0.0309 0.14 0.93 DC L1
ENSG00000024862 CCDC28A -954178 sc-eQTL 7.85e-01 -0.0344 0.126 0.929 Mono L1
ENSG00000027697 IFNGR1 599882 sc-eQTL 6.15e-01 0.054 0.107 0.929 Mono L1
ENSG00000051620 HEBP2 -584200 sc-eQTL 8.50e-01 -0.0165 0.087 0.929 Mono L1
ENSG00000112357 PEX7 996767 sc-eQTL 1.20e-01 0.28 0.179 0.929 Mono L1
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 9.62e-01 0.00438 0.091 0.929 Mono L1
ENSG00000135540 NHSL1 -873240 sc-eQTL 9.13e-01 0.0179 0.164 0.929 Mono L1
ENSG00000225177 AL590617.2 -873217 sc-eQTL 4.07e-01 0.142 0.171 0.929 Mono L1
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 1.45e-01 -0.164 0.112 0.929 Mono L1
ENSG00000024862 CCDC28A -954178 sc-eQTL 2.32e-02 -0.342 0.15 0.929 NK L1
ENSG00000027697 IFNGR1 599882 sc-eQTL 7.86e-02 0.204 0.116 0.929 NK L1
ENSG00000051620 HEBP2 -584200 sc-eQTL 6.73e-01 0.0563 0.133 0.929 NK L1
ENSG00000112357 PEX7 996767 sc-eQTL 3.04e-01 0.185 0.179 0.929 NK L1
ENSG00000112378 PERP -288088 sc-eQTL 6.57e-01 0.0504 0.113 0.929 NK L1
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 9.66e-03 -0.249 0.0954 0.929 NK L1
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 2.24e-01 -0.167 0.137 0.929 NK L1
ENSG00000024862 CCDC28A -954178 sc-eQTL 7.35e-02 -0.327 0.182 0.929 Other_T L1
ENSG00000027697 IFNGR1 599882 sc-eQTL 5.73e-01 0.0629 0.111 0.929 Other_T L1
ENSG00000051620 HEBP2 -584200 sc-eQTL 9.00e-01 0.0149 0.118 0.929 Other_T L1
ENSG00000112357 PEX7 996767 sc-eQTL 4.23e-01 0.145 0.181 0.929 Other_T L1
ENSG00000112378 PERP -288088 sc-eQTL 1.59e-01 0.205 0.145 0.929 Other_T L1
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 4.80e-02 -0.137 0.0687 0.929 Other_T L1
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 1.04e-01 -0.223 0.137 0.929 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -954178 sc-eQTL 8.37e-02 -0.334 0.192 0.923 B_Activated L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 7.87e-02 0.303 0.171 0.923 B_Activated L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 7.20e-01 -0.0609 0.169 0.923 B_Activated L2
ENSG00000112357 PEX7 996767 sc-eQTL 1.49e-01 -0.245 0.169 0.923 B_Activated L2
ENSG00000112378 PERP -288088 sc-eQTL 1.41e-01 0.129 0.0875 0.923 B_Activated L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 4.83e-01 -0.12 0.171 0.923 B_Activated L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 2.14e-01 0.185 0.148 0.923 B_Activated L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 6.60e-01 -0.0763 0.173 0.929 B_Intermediate L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 4.75e-01 -0.115 0.16 0.929 B_Intermediate L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 8.89e-01 -0.0168 0.12 0.929 B_Intermediate L2
ENSG00000112357 PEX7 996767 sc-eQTL 7.74e-01 0.0481 0.168 0.929 B_Intermediate L2
ENSG00000112378 PERP -288088 sc-eQTL 2.79e-01 0.165 0.152 0.929 B_Intermediate L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 2.47e-01 -0.139 0.12 0.929 B_Intermediate L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 2.54e-02 -0.378 0.168 0.929 B_Intermediate L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 9.97e-01 0.00069 0.176 0.929 B_Memory L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 3.49e-01 -0.163 0.173 0.929 B_Memory L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 1.82e-01 0.176 0.132 0.929 B_Memory L2
ENSG00000112357 PEX7 996767 sc-eQTL 6.16e-01 -0.0881 0.175 0.929 B_Memory L2
ENSG00000112378 PERP -288088 sc-eQTL 3.97e-01 0.14 0.165 0.929 B_Memory L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 9.01e-01 0.0142 0.114 0.929 B_Memory L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 9.59e-01 -0.0088 0.169 0.929 B_Memory L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 8.65e-01 -0.028 0.165 0.929 B_Naive1 L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 7.35e-01 0.0462 0.136 0.929 B_Naive1 L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 7.20e-01 -0.0416 0.116 0.929 B_Naive1 L2
ENSG00000112357 PEX7 996767 sc-eQTL 3.71e-01 0.161 0.18 0.929 B_Naive1 L2
ENSG00000112378 PERP -288088 sc-eQTL 8.62e-01 0.0274 0.157 0.929 B_Naive1 L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 4.92e-02 -0.179 0.0904 0.929 B_Naive1 L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 3.04e-01 -0.147 0.143 0.929 B_Naive1 L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 8.82e-01 0.024 0.161 0.929 B_Naive2 L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 7.09e-01 -0.0621 0.166 0.929 B_Naive2 L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 3.83e-01 -0.096 0.11 0.929 B_Naive2 L2
ENSG00000112357 PEX7 996767 sc-eQTL 1.45e-02 0.441 0.179 0.929 B_Naive2 L2
ENSG00000112378 PERP -288088 sc-eQTL 8.53e-01 0.0246 0.132 0.929 B_Naive2 L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 8.03e-01 -0.0331 0.132 0.929 B_Naive2 L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 4.06e-01 -0.142 0.171 0.929 B_Naive2 L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 3.30e-01 -0.164 0.168 0.927 CD4_CTL L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 1.76e-01 0.213 0.157 0.927 CD4_CTL L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 6.77e-01 -0.0605 0.145 0.927 CD4_CTL L2
ENSG00000112357 PEX7 996767 sc-eQTL 5.42e-01 -0.106 0.174 0.927 CD4_CTL L2
ENSG00000112378 PERP -288088 sc-eQTL 8.15e-01 -0.0415 0.177 0.927 CD4_CTL L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 9.83e-03 -0.264 0.101 0.927 CD4_CTL L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 9.48e-01 -0.0106 0.161 0.927 CD4_CTL L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 5.87e-01 -0.0887 0.163 0.929 CD4_Naive L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 2.06e-01 0.109 0.086 0.929 CD4_Naive L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 6.18e-01 -0.0508 0.102 0.929 CD4_Naive L2
ENSG00000112357 PEX7 996767 sc-eQTL 3.27e-02 -0.346 0.161 0.929 CD4_Naive L2
ENSG00000112378 PERP -288088 sc-eQTL 9.18e-01 0.0139 0.134 0.929 CD4_Naive L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 1.53e-01 -0.135 0.0939 0.929 CD4_Naive L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 4.61e-01 -0.0901 0.122 0.929 CD4_Naive L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 8.05e-01 -0.0397 0.161 0.929 CD4_TCM L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 9.95e-01 -0.000724 0.121 0.929 CD4_TCM L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 3.69e-01 -0.108 0.119 0.929 CD4_TCM L2
ENSG00000112357 PEX7 996767 sc-eQTL 1.86e-01 0.235 0.177 0.929 CD4_TCM L2
ENSG00000112378 PERP -288088 sc-eQTL 9.08e-01 -0.0174 0.15 0.929 CD4_TCM L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 4.44e-02 -0.175 0.0864 0.929 CD4_TCM L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 4.18e-02 -0.248 0.121 0.929 CD4_TCM L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 3.44e-01 0.173 0.182 0.929 CD4_TEM L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 8.31e-01 -0.0296 0.138 0.929 CD4_TEM L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 8.55e-01 -0.0227 0.124 0.929 CD4_TEM L2
ENSG00000112357 PEX7 996767 sc-eQTL 1.72e-01 -0.244 0.178 0.929 CD4_TEM L2
ENSG00000112378 PERP -288088 sc-eQTL 4.81e-01 0.102 0.144 0.929 CD4_TEM L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 5.51e-01 -0.0548 0.0918 0.929 CD4_TEM L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 8.24e-01 0.0328 0.147 0.929 CD4_TEM L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 5.99e-01 0.0981 0.186 0.929 CD8_CTL L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 7.68e-01 0.037 0.125 0.929 CD8_CTL L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 8.40e-01 0.027 0.133 0.929 CD8_CTL L2
ENSG00000112357 PEX7 996767 sc-eQTL 5.17e-02 0.335 0.171 0.929 CD8_CTL L2
ENSG00000112378 PERP -288088 sc-eQTL 1.04e-01 0.27 0.165 0.929 CD8_CTL L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 3.33e-02 -0.224 0.104 0.929 CD8_CTL L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 2.06e-02 -0.342 0.147 0.929 CD8_CTL L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 4.38e-01 -0.137 0.176 0.929 CD8_Naive L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 3.61e-01 0.112 0.123 0.929 CD8_Naive L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 9.86e-01 -0.00196 0.113 0.929 CD8_Naive L2
ENSG00000112357 PEX7 996767 sc-eQTL 5.38e-01 0.11 0.178 0.929 CD8_Naive L2
ENSG00000112378 PERP -288088 sc-eQTL 7.80e-01 -0.0379 0.135 0.929 CD8_Naive L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 1.22e-01 -0.148 0.0956 0.929 CD8_Naive L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 1.75e-03 -0.44 0.139 0.929 CD8_Naive L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 1.08e-01 -0.316 0.196 0.928 CD8_TCM L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 4.70e-04 -0.561 0.158 0.928 CD8_TCM L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 6.02e-01 -0.0724 0.139 0.928 CD8_TCM L2
ENSG00000112357 PEX7 996767 sc-eQTL 6.94e-01 -0.0737 0.187 0.928 CD8_TCM L2
ENSG00000112378 PERP -288088 sc-eQTL 6.86e-01 0.074 0.183 0.928 CD8_TCM L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 6.72e-02 -0.161 0.0875 0.928 CD8_TCM L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 6.80e-01 -0.0666 0.161 0.928 CD8_TCM L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 1.24e-01 0.281 0.182 0.929 CD8_TEM L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 4.27e-01 0.126 0.158 0.929 CD8_TEM L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 6.40e-03 -0.45 0.163 0.929 CD8_TEM L2
ENSG00000112357 PEX7 996767 sc-eQTL 3.82e-01 -0.159 0.182 0.929 CD8_TEM L2
ENSG00000112378 PERP -288088 sc-eQTL 4.98e-01 0.129 0.189 0.929 CD8_TEM L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 1.82e-02 -0.274 0.115 0.929 CD8_TEM L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 2.97e-01 -0.181 0.173 0.929 CD8_TEM L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 3.67e-01 -0.181 0.2 0.929 MAIT L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 8.20e-01 0.0296 0.13 0.929 MAIT L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 7.05e-01 -0.0528 0.139 0.929 MAIT L2
ENSG00000112357 PEX7 996767 sc-eQTL 5.36e-01 0.109 0.176 0.929 MAIT L2
ENSG00000112378 PERP -288088 sc-eQTL 1.30e-01 0.279 0.183 0.929 MAIT L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 9.17e-02 -0.148 0.0871 0.929 MAIT L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 5.75e-01 -0.0909 0.162 0.929 MAIT L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 5.14e-01 -0.121 0.185 0.929 NK_CD56bright L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 8.37e-02 0.249 0.143 0.929 NK_CD56bright L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 3.89e-01 0.136 0.157 0.929 NK_CD56bright L2
ENSG00000112357 PEX7 996767 sc-eQTL 1.61e-01 0.263 0.187 0.929 NK_CD56bright L2
ENSG00000112378 PERP -288088 sc-eQTL 6.58e-01 0.0749 0.169 0.929 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 2.33e-01 -0.128 0.107 0.929 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 5.31e-01 -0.108 0.171 0.929 NK_CD56bright L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 1.05e-02 -0.415 0.161 0.929 NK_CD56dim L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 3.39e-01 0.103 0.107 0.929 NK_CD56dim L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 7.52e-01 0.0458 0.145 0.929 NK_CD56dim L2
ENSG00000112357 PEX7 996767 sc-eQTL 1.56e-01 0.262 0.184 0.929 NK_CD56dim L2
ENSG00000112378 PERP -288088 sc-eQTL 2.25e-01 0.158 0.129 0.929 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 5.89e-03 -0.276 0.0992 0.929 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 8.18e-01 -0.0349 0.151 0.929 NK_CD56dim L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 2.43e-01 0.217 0.185 0.925 NK_HLA L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 2.49e-03 0.409 0.133 0.925 NK_HLA L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 8.70e-01 0.026 0.158 0.925 NK_HLA L2
ENSG00000112357 PEX7 996767 sc-eQTL 3.06e-01 -0.178 0.173 0.925 NK_HLA L2
ENSG00000112378 PERP -288088 sc-eQTL 7.82e-01 0.039 0.141 0.925 NK_HLA L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 8.63e-02 -0.185 0.107 0.925 NK_HLA L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 1.28e-01 -0.265 0.173 0.925 NK_HLA L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 9.32e-03 -0.442 0.168 0.929 NK_cytokine L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 2.62e-01 0.129 0.115 0.929 NK_cytokine L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 9.15e-01 0.0157 0.147 0.929 NK_cytokine L2
ENSG00000112357 PEX7 996767 sc-eQTL 6.05e-01 -0.0938 0.181 0.929 NK_cytokine L2
ENSG00000112378 PERP -288088 sc-eQTL 4.12e-01 0.113 0.137 0.929 NK_cytokine L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 2.67e-03 -0.306 0.101 0.929 NK_cytokine L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 3.53e-01 -0.144 0.155 0.929 NK_cytokine L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 4.33e-01 0.155 0.197 0.922 PB L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 6.71e-01 0.0889 0.209 0.922 PB L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 3.02e-01 -0.182 0.175 0.922 PB L2
ENSG00000112357 PEX7 996767 sc-eQTL 9.95e-01 0.00145 0.214 0.922 PB L2
ENSG00000112378 PERP -288088 sc-eQTL 7.22e-01 0.0477 0.134 0.922 PB L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 9.31e-01 0.0141 0.162 0.922 PB L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 6.93e-01 -0.0772 0.195 0.922 PB L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 8.01e-01 0.0483 0.191 0.928 Pro_T L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 4.06e-01 0.121 0.145 0.928 Pro_T L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 7.00e-01 -0.0588 0.152 0.928 Pro_T L2
ENSG00000112357 PEX7 996767 sc-eQTL 4.70e-01 0.128 0.177 0.928 Pro_T L2
ENSG00000112378 PERP -288088 sc-eQTL 2.31e-01 0.169 0.14 0.928 Pro_T L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 8.33e-01 -0.0188 0.0887 0.928 Pro_T L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 7.91e-01 0.0456 0.172 0.928 Pro_T L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 3.77e-01 0.155 0.175 0.929 Treg L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 9.74e-01 0.00536 0.165 0.929 Treg L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 5.40e-01 -0.0736 0.12 0.929 Treg L2
ENSG00000112357 PEX7 996767 sc-eQTL 2.96e-02 -0.378 0.173 0.929 Treg L2
ENSG00000112378 PERP -288088 sc-eQTL 2.28e-01 0.227 0.188 0.929 Treg L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 8.60e-03 -0.274 0.103 0.929 Treg L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 3.54e-01 -0.149 0.16 0.929 Treg L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 8.50e-01 0.0344 0.182 0.934 cDC L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 2.50e-01 0.17 0.147 0.934 cDC L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 2.53e-01 0.149 0.13 0.934 cDC L2
ENSG00000112357 PEX7 996767 sc-eQTL 8.41e-01 0.0384 0.191 0.934 cDC L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 1.57e-01 0.206 0.145 0.934 cDC L2
ENSG00000135540 NHSL1 -873240 sc-eQTL 4.12e-01 0.139 0.169 0.934 cDC L2
ENSG00000225177 AL590617.2 -873217 sc-eQTL 4.64e-01 0.137 0.186 0.934 cDC L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 5.57e-01 0.112 0.19 0.934 cDC L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 1.00e-01 -0.223 0.135 0.929 cMono_IL1B L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 9.98e-01 0.000236 0.0993 0.929 cMono_IL1B L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 9.07e-01 0.0114 0.0978 0.929 cMono_IL1B L2
ENSG00000112357 PEX7 996767 sc-eQTL 2.81e-02 0.39 0.176 0.929 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 6.10e-01 0.0546 0.107 0.929 cMono_IL1B L2
ENSG00000135540 NHSL1 -873240 sc-eQTL 7.66e-01 -0.0489 0.164 0.929 cMono_IL1B L2
ENSG00000225177 AL590617.2 -873217 sc-eQTL 3.21e-01 0.17 0.171 0.929 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 5.80e-02 -0.216 0.113 0.929 cMono_IL1B L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 9.99e-02 0.257 0.156 0.929 cMono_S100A L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 4.99e-01 0.0778 0.115 0.929 cMono_S100A L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 4.44e-01 -0.0821 0.107 0.929 cMono_S100A L2
ENSG00000112357 PEX7 996767 sc-eQTL 5.69e-01 0.105 0.185 0.929 cMono_S100A L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 5.41e-01 0.0626 0.102 0.929 cMono_S100A L2
ENSG00000135540 NHSL1 -873240 sc-eQTL 9.69e-01 0.00646 0.168 0.929 cMono_S100A L2
ENSG00000225177 AL590617.2 -873217 sc-eQTL 5.73e-01 0.104 0.184 0.929 cMono_S100A L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 5.75e-01 -0.0825 0.147 0.929 cMono_S100A L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 3.79e-01 0.188 0.213 0.927 gdT L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 7.92e-01 -0.0451 0.171 0.927 gdT L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 8.29e-01 -0.0441 0.203 0.927 gdT L2
ENSG00000112357 PEX7 996767 sc-eQTL 9.31e-01 -0.0188 0.217 0.927 gdT L2
ENSG00000112378 PERP -288088 sc-eQTL 5.30e-01 0.119 0.189 0.927 gdT L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 7.68e-02 -0.185 0.104 0.927 gdT L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 8.27e-02 -0.329 0.188 0.927 gdT L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 3.20e-01 0.182 0.183 0.929 intMono L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 8.30e-01 -0.0266 0.123 0.929 intMono L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 5.83e-01 -0.0676 0.123 0.929 intMono L2
ENSG00000112357 PEX7 996767 sc-eQTL 9.22e-01 0.0163 0.166 0.929 intMono L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 8.89e-01 -0.0149 0.106 0.929 intMono L2
ENSG00000135540 NHSL1 -873240 sc-eQTL 7.75e-01 -0.0474 0.166 0.929 intMono L2
ENSG00000225177 AL590617.2 -873217 sc-eQTL 7.97e-01 -0.0478 0.186 0.929 intMono L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 5.74e-01 0.0894 0.159 0.929 intMono L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 5.68e-01 -0.105 0.184 0.939 ncMono L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 1.54e-01 0.223 0.156 0.939 ncMono L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 2.52e-01 -0.126 0.109 0.939 ncMono L2
ENSG00000112357 PEX7 996767 sc-eQTL 7.11e-01 -0.0722 0.194 0.939 ncMono L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 4.23e-01 -0.111 0.138 0.939 ncMono L2
ENSG00000135540 NHSL1 -873240 sc-eQTL 4.64e-01 0.13 0.177 0.939 ncMono L2
ENSG00000225177 AL590617.2 -873217 sc-eQTL 7.79e-01 0.0552 0.196 0.939 ncMono L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 6.89e-01 -0.0694 0.173 0.939 ncMono L2
ENSG00000024862 CCDC28A -954178 sc-eQTL 1.50e-02 -0.49 0.199 0.935 pDC L2
ENSG00000027697 IFNGR1 599882 sc-eQTL 8.95e-01 0.0227 0.172 0.935 pDC L2
ENSG00000051620 HEBP2 -584200 sc-eQTL 4.33e-02 0.317 0.156 0.935 pDC L2
ENSG00000112357 PEX7 996767 sc-eQTL 5.86e-02 -0.357 0.187 0.935 pDC L2
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 1.10e-01 0.254 0.158 0.935 pDC L2
ENSG00000135540 NHSL1 -873240 sc-eQTL 4.48e-01 -0.119 0.157 0.935 pDC L2
ENSG00000225177 AL590617.2 -873217 sc-eQTL 5.55e-01 -0.0933 0.158 0.935 pDC L2
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 3.39e-01 -0.155 0.162 0.935 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -954178 sc-eQTL 3.31e-01 -0.163 0.168 0.929 B_Memory LOneK1K
ENSG00000027697 IFNGR1 599882 sc-eQTL 5.91e-01 -0.0772 0.143 0.929 B_Memory LOneK1K
ENSG00000051620 HEBP2 -584200 sc-eQTL 6.03e-01 0.0606 0.116 0.929 B_Memory LOneK1K
ENSG00000112357 PEX7 996767 sc-eQTL 5.78e-01 -0.0918 0.165 0.929 B_Memory LOneK1K
ENSG00000112378 PERP -288088 sc-eQTL 1.83e-01 0.204 0.153 0.929 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 6.93e-01 -0.04 0.101 0.929 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 1.13e-01 -0.27 0.17 0.929 B_Memory LOneK1K
ENSG00000024862 CCDC28A -954178 sc-eQTL 9.27e-01 0.0142 0.154 0.929 B_Naive LOneK1K
ENSG00000027697 IFNGR1 599882 sc-eQTL 7.57e-01 0.0445 0.144 0.929 B_Naive LOneK1K
ENSG00000051620 HEBP2 -584200 sc-eQTL 4.06e-01 -0.0887 0.107 0.929 B_Naive LOneK1K
ENSG00000112357 PEX7 996767 sc-eQTL 4.20e-02 0.355 0.173 0.929 B_Naive LOneK1K
ENSG00000112378 PERP -288088 sc-eQTL 9.63e-01 0.00734 0.157 0.929 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 1.19e-01 -0.128 0.0819 0.929 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 2.29e-01 -0.176 0.146 0.929 B_Naive LOneK1K
ENSG00000024862 CCDC28A -954178 sc-eQTL 9.43e-01 -0.00892 0.125 0.929 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 599882 sc-eQTL 7.77e-01 0.0284 0.0999 0.929 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -584200 sc-eQTL 6.03e-01 -0.0487 0.0934 0.929 CD14_Mono LOneK1K
ENSG00000112357 PEX7 996767 sc-eQTL 3.61e-02 0.374 0.177 0.929 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 7.89e-01 0.0248 0.0924 0.929 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -873240 sc-eQTL 7.64e-01 -0.0493 0.164 0.929 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -873217 sc-eQTL 5.08e-01 0.117 0.176 0.929 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 6.83e-02 -0.201 0.11 0.929 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A -954178 sc-eQTL 4.94e-01 0.121 0.176 0.929 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 599882 sc-eQTL 4.21e-01 0.0994 0.123 0.929 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -584200 sc-eQTL 6.32e-01 -0.0452 0.0943 0.929 CD16_Mono LOneK1K
ENSG00000112357 PEX7 996767 sc-eQTL 5.75e-01 -0.105 0.186 0.929 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 8.23e-01 -0.0259 0.115 0.929 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -873240 sc-eQTL 3.36e-01 0.161 0.167 0.929 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -873217 sc-eQTL 6.35e-01 -0.0882 0.185 0.929 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 3.88e-01 0.134 0.155 0.929 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A -954178 sc-eQTL 9.06e-03 -0.407 0.154 0.929 NK_CD56dim LOneK1K
ENSG00000027697 IFNGR1 599882 sc-eQTL 1.02e-01 0.179 0.109 0.929 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -584200 sc-eQTL 9.65e-01 0.00598 0.136 0.929 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 996767 sc-eQTL 8.32e-01 0.0393 0.185 0.929 NK_CD56dim LOneK1K
ENSG00000112378 PERP -288088 sc-eQTL 6.01e-01 0.06 0.115 0.929 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -47883 sc-eQTL 9.94e-03 -0.256 0.0984 0.929 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -48902 sc-eQTL 1.96e-01 -0.181 0.139 0.929 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000118503 TNFAIP3 -47883 eQTL 6.48e-05 -0.0916 0.0228 0.0134 0.0121 0.08
ENSG00000220412 AL356234.1 112130 eQTL 0.00342 -0.124 0.0424 0.00348 0.00142 0.08
ENSG00000237499 AL357060.1 -48902 eQTL 0.000152 -0.0833 0.0219 0.00251 0.00254 0.08

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000118503 TNFAIP3 -47883 3.69e-05 1.38e-05 2.49e-06 6.74e-06 2.38e-06 6.82e-06 1.68e-05 1.29e-06 9.93e-06 5.49e-06 1.28e-05 5.57e-06 1.8e-05 5.09e-06 2.98e-06 6.7e-06 5.87e-06 1.03e-05 3.32e-06 2.51e-06 5.87e-06 1.18e-05 1.32e-05 3.03e-06 1.81e-05 2.82e-06 5.19e-06 3.77e-06 1.66e-05 1.2e-05 6.28e-06 4.18e-07 6.44e-07 2.98e-06 3.88e-06 2.11e-06 1.04e-06 1.84e-06 9.67e-07 7.35e-07 8.22e-07 1.86e-05 1.6e-06 1.56e-07 8.09e-07 1.22e-06 1.47e-06 3.35e-07 4.39e-07
ENSG00000237499 AL357060.1 -48902 3.69e-05 1.38e-05 2.36e-06 6.54e-06 2.28e-06 6.64e-06 1.61e-05 1.22e-06 1e-05 5.39e-06 1.25e-05 5.55e-06 1.74e-05 4.89e-06 2.82e-06 6.67e-06 5.73e-06 1e-05 3.17e-06 2.41e-06 5.84e-06 1.15e-05 1.31e-05 2.84e-06 1.77e-05 2.77e-06 4.88e-06 3.69e-06 1.62e-05 1.19e-05 6.37e-06 4.03e-07 6.66e-07 2.99e-06 3.69e-06 2.06e-06 1.08e-06 1.68e-06 9.06e-07 7.61e-07 8.27e-07 1.85e-05 1.61e-06 1.65e-07 8.18e-07 1.06e-06 1.38e-06 2.87e-07 3.29e-07