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Genes within 1Mb (chr6:137817718:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -955791 sc-eQTL 9.17e-01 -0.00995 0.0953 0.831 B L1
ENSG00000027697 IFNGR1 598269 sc-eQTL 8.39e-01 0.0189 0.0927 0.831 B L1
ENSG00000051620 HEBP2 -585813 sc-eQTL 7.98e-01 0.0186 0.0727 0.831 B L1
ENSG00000112357 PEX7 995154 sc-eQTL 7.80e-01 0.0307 0.11 0.831 B L1
ENSG00000112378 PERP -289701 sc-eQTL 5.58e-01 0.0425 0.0725 0.831 B L1
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 8.62e-02 -0.1 0.0581 0.831 B L1
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 7.40e-01 -0.0306 0.092 0.831 B L1
ENSG00000024862 CCDC28A -955791 sc-eQTL 7.37e-01 -0.0356 0.106 0.831 CD4T L1
ENSG00000027697 IFNGR1 598269 sc-eQTL 5.32e-01 0.0389 0.0621 0.831 CD4T L1
ENSG00000051620 HEBP2 -585813 sc-eQTL 7.43e-01 0.0234 0.0713 0.831 CD4T L1
ENSG00000112357 PEX7 995154 sc-eQTL 1.46e-02 -0.243 0.0987 0.831 CD4T L1
ENSG00000112378 PERP -289701 sc-eQTL 1.14e-01 0.106 0.0668 0.831 CD4T L1
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 7.02e-03 -0.169 0.0619 0.831 CD4T L1
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 8.52e-01 0.0148 0.0793 0.831 CD4T L1
ENSG00000024862 CCDC28A -955791 sc-eQTL 5.12e-01 0.077 0.117 0.831 CD8T L1
ENSG00000027697 IFNGR1 598269 sc-eQTL 7.65e-01 0.0215 0.0718 0.831 CD8T L1
ENSG00000051620 HEBP2 -585813 sc-eQTL 5.32e-01 0.0481 0.0768 0.831 CD8T L1
ENSG00000112357 PEX7 995154 sc-eQTL 6.33e-01 0.0573 0.12 0.831 CD8T L1
ENSG00000112378 PERP -289701 sc-eQTL 2.73e-01 0.0858 0.0781 0.831 CD8T L1
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 8.66e-03 -0.158 0.0594 0.831 CD8T L1
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 2.43e-01 -0.104 0.0885 0.831 CD8T L1
ENSG00000024862 CCDC28A -955791 sc-eQTL 6.11e-02 -0.218 0.116 0.831 DC L1
ENSG00000027697 IFNGR1 598269 sc-eQTL 6.39e-01 -0.0406 0.0865 0.831 DC L1
ENSG00000051620 HEBP2 -585813 sc-eQTL 5.33e-01 0.0512 0.082 0.831 DC L1
ENSG00000112357 PEX7 995154 sc-eQTL 5.23e-01 0.0779 0.122 0.831 DC L1
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 8.06e-01 -0.0227 0.0925 0.831 DC L1
ENSG00000135540 NHSL1 -874853 sc-eQTL 2.11e-01 -0.134 0.107 0.831 DC L1
ENSG00000225177 AL590617.2 -874830 sc-eQTL 6.86e-01 0.0453 0.112 0.831 DC L1
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 6.57e-01 0.0419 0.0943 0.831 DC L1
ENSG00000024862 CCDC28A -955791 sc-eQTL 4.46e-01 -0.0656 0.0858 0.831 Mono L1
ENSG00000027697 IFNGR1 598269 sc-eQTL 3.68e-01 -0.066 0.0731 0.831 Mono L1
ENSG00000051620 HEBP2 -585813 sc-eQTL 7.91e-01 0.0158 0.0595 0.831 Mono L1
ENSG00000112357 PEX7 995154 sc-eQTL 4.71e-01 0.089 0.123 0.831 Mono L1
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 1.93e-01 -0.0809 0.0619 0.831 Mono L1
ENSG00000135540 NHSL1 -874853 sc-eQTL 6.61e-01 -0.0492 0.112 0.831 Mono L1
ENSG00000225177 AL590617.2 -874830 sc-eQTL 4.28e-02 0.236 0.116 0.831 Mono L1
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 2.50e-03 -0.231 0.0754 0.831 Mono L1
ENSG00000024862 CCDC28A -955791 sc-eQTL 3.80e-01 -0.0895 0.102 0.833 NK L1
ENSG00000027697 IFNGR1 598269 sc-eQTL 8.20e-01 0.0179 0.0784 0.833 NK L1
ENSG00000051620 HEBP2 -585813 sc-eQTL 8.80e-01 -0.0136 0.0899 0.833 NK L1
ENSG00000112357 PEX7 995154 sc-eQTL 3.46e-01 0.114 0.121 0.833 NK L1
ENSG00000112378 PERP -289701 sc-eQTL 3.10e-01 0.0774 0.0761 0.833 NK L1
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 5.21e-06 -0.291 0.0621 0.833 NK L1
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 3.78e-01 -0.0816 0.0924 0.833 NK L1
ENSG00000024862 CCDC28A -955791 sc-eQTL 1.54e-01 -0.174 0.122 0.831 Other_T L1
ENSG00000027697 IFNGR1 598269 sc-eQTL 4.59e-01 -0.0553 0.0745 0.831 Other_T L1
ENSG00000051620 HEBP2 -585813 sc-eQTL 6.37e-01 0.0374 0.0791 0.831 Other_T L1
ENSG00000112357 PEX7 995154 sc-eQTL 4.53e-01 -0.0913 0.122 0.831 Other_T L1
ENSG00000112378 PERP -289701 sc-eQTL 5.60e-01 0.0569 0.0976 0.831 Other_T L1
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 4.70e-04 -0.16 0.0451 0.831 Other_T L1
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 7.17e-02 -0.166 0.0915 0.831 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -955791 sc-eQTL 8.93e-01 0.0182 0.135 0.824 B_Activated L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 1.91e-01 0.158 0.12 0.824 B_Activated L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 9.24e-01 -0.0114 0.119 0.824 B_Activated L2
ENSG00000112357 PEX7 995154 sc-eQTL 8.77e-01 0.0185 0.119 0.824 B_Activated L2
ENSG00000112378 PERP -289701 sc-eQTL 5.28e-02 0.119 0.061 0.824 B_Activated L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 2.12e-01 -0.149 0.119 0.824 B_Activated L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 1.76e-01 0.141 0.104 0.824 B_Activated L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 1.41e-01 0.176 0.119 0.83 B_Intermediate L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 7.54e-01 0.0346 0.11 0.83 B_Intermediate L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 7.69e-02 0.146 0.0821 0.83 B_Intermediate L2
ENSG00000112357 PEX7 995154 sc-eQTL 6.60e-01 -0.0509 0.115 0.83 B_Intermediate L2
ENSG00000112378 PERP -289701 sc-eQTL 5.44e-01 0.0639 0.105 0.83 B_Intermediate L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 1.51e-01 -0.119 0.0822 0.83 B_Intermediate L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 1.03e-01 -0.191 0.116 0.83 B_Intermediate L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 7.98e-01 0.0307 0.12 0.83 B_Memory L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 8.72e-01 -0.0191 0.118 0.83 B_Memory L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 2.87e-01 0.096 0.09 0.83 B_Memory L2
ENSG00000112357 PEX7 995154 sc-eQTL 3.62e-01 -0.109 0.119 0.83 B_Memory L2
ENSG00000112378 PERP -289701 sc-eQTL 5.75e-01 -0.0632 0.112 0.83 B_Memory L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 1.87e-01 -0.102 0.0771 0.83 B_Memory L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 9.88e-01 -0.00168 0.115 0.83 B_Memory L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 9.25e-01 -0.0108 0.114 0.831 B_Naive1 L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 7.64e-01 0.0284 0.0945 0.831 B_Naive1 L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 5.02e-01 0.0541 0.0803 0.831 B_Naive1 L2
ENSG00000112357 PEX7 995154 sc-eQTL 3.49e-01 0.117 0.124 0.831 B_Naive1 L2
ENSG00000112378 PERP -289701 sc-eQTL 7.16e-01 0.0398 0.109 0.831 B_Naive1 L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 3.99e-03 -0.181 0.062 0.831 B_Naive1 L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 6.51e-01 -0.0448 0.0991 0.831 B_Naive1 L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 4.24e-01 -0.0893 0.111 0.83 B_Naive2 L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 5.07e-01 0.0764 0.115 0.83 B_Naive2 L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 6.98e-01 -0.0296 0.0762 0.83 B_Naive2 L2
ENSG00000112357 PEX7 995154 sc-eQTL 4.34e-02 0.253 0.125 0.83 B_Naive2 L2
ENSG00000112378 PERP -289701 sc-eQTL 4.14e-01 0.0749 0.0915 0.83 B_Naive2 L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 8.62e-02 -0.157 0.0909 0.83 B_Naive2 L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 8.13e-01 0.0281 0.118 0.83 B_Naive2 L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 5.13e-01 -0.0756 0.115 0.83 CD4_CTL L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 1.45e-02 0.262 0.106 0.83 CD4_CTL L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 5.67e-01 0.0571 0.0996 0.83 CD4_CTL L2
ENSG00000112357 PEX7 995154 sc-eQTL 8.45e-01 -0.0235 0.12 0.83 CD4_CTL L2
ENSG00000112378 PERP -289701 sc-eQTL 8.64e-01 0.0209 0.121 0.83 CD4_CTL L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 3.33e-05 -0.288 0.0678 0.83 CD4_CTL L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 9.37e-01 0.00875 0.11 0.83 CD4_CTL L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 3.99e-01 -0.0943 0.112 0.831 CD4_Naive L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 2.19e-01 0.0725 0.0588 0.831 CD4_Naive L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 5.17e-01 0.0452 0.0696 0.831 CD4_Naive L2
ENSG00000112357 PEX7 995154 sc-eQTL 4.81e-03 -0.312 0.109 0.831 CD4_Naive L2
ENSG00000112378 PERP -289701 sc-eQTL 7.18e-01 0.0333 0.092 0.831 CD4_Naive L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 1.74e-02 -0.153 0.0637 0.831 CD4_Naive L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 9.30e-01 -0.00732 0.0836 0.831 CD4_Naive L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 6.10e-01 -0.0557 0.109 0.831 CD4_TCM L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 8.15e-01 -0.0192 0.0821 0.831 CD4_TCM L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 5.90e-01 -0.0438 0.0811 0.831 CD4_TCM L2
ENSG00000112357 PEX7 995154 sc-eQTL 6.26e-01 0.0589 0.12 0.831 CD4_TCM L2
ENSG00000112378 PERP -289701 sc-eQTL 6.21e-01 0.0504 0.102 0.831 CD4_TCM L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 3.49e-03 -0.171 0.058 0.831 CD4_TCM L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 8.59e-01 0.0148 0.0829 0.831 CD4_TCM L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 2.64e-01 0.141 0.126 0.831 CD4_TEM L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 7.32e-01 -0.0328 0.0955 0.831 CD4_TEM L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 4.25e-01 0.0686 0.0858 0.831 CD4_TEM L2
ENSG00000112357 PEX7 995154 sc-eQTL 1.85e-02 -0.289 0.122 0.831 CD4_TEM L2
ENSG00000112378 PERP -289701 sc-eQTL 3.42e-01 0.095 0.0998 0.831 CD4_TEM L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 7.57e-03 -0.168 0.0624 0.831 CD4_TEM L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 7.46e-02 0.181 0.101 0.831 CD4_TEM L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 5.01e-01 0.0859 0.127 0.831 CD8_CTL L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 6.14e-01 -0.0433 0.0859 0.831 CD8_CTL L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 9.74e-01 0.00296 0.0911 0.831 CD8_CTL L2
ENSG00000112357 PEX7 995154 sc-eQTL 5.42e-01 0.0722 0.118 0.831 CD8_CTL L2
ENSG00000112378 PERP -289701 sc-eQTL 2.20e-01 0.139 0.113 0.831 CD8_CTL L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 5.72e-04 -0.246 0.0703 0.831 CD8_CTL L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 1.11e-01 -0.162 0.101 0.831 CD8_CTL L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 5.37e-01 -0.0747 0.121 0.831 CD8_Naive L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 1.76e-01 0.114 0.084 0.831 CD8_Naive L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 7.39e-01 0.0258 0.0773 0.831 CD8_Naive L2
ENSG00000112357 PEX7 995154 sc-eQTL 3.64e-01 0.111 0.122 0.831 CD8_Naive L2
ENSG00000112378 PERP -289701 sc-eQTL 7.91e-01 -0.0246 0.0929 0.831 CD8_Naive L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 2.25e-02 -0.15 0.0651 0.831 CD8_Naive L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 2.62e-01 -0.109 0.0972 0.831 CD8_Naive L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 9.62e-01 0.00674 0.139 0.831 CD8_TCM L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 4.49e-01 -0.0871 0.115 0.831 CD8_TCM L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 2.42e-01 -0.115 0.0976 0.831 CD8_TCM L2
ENSG00000112357 PEX7 995154 sc-eQTL 4.96e-01 0.0901 0.132 0.831 CD8_TCM L2
ENSG00000112378 PERP -289701 sc-eQTL 8.91e-01 -0.0177 0.129 0.831 CD8_TCM L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 2.24e-02 -0.142 0.0615 0.831 CD8_TCM L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 2.39e-01 0.134 0.114 0.831 CD8_TCM L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 8.34e-01 0.0261 0.124 0.833 CD8_TEM L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 1.93e-01 0.14 0.107 0.833 CD8_TEM L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 4.54e-01 -0.0847 0.113 0.833 CD8_TEM L2
ENSG00000112357 PEX7 995154 sc-eQTL 1.02e-01 -0.202 0.123 0.833 CD8_TEM L2
ENSG00000112378 PERP -289701 sc-eQTL 3.58e-01 0.118 0.129 0.833 CD8_TEM L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 3.05e-04 -0.282 0.0768 0.833 CD8_TEM L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 7.73e-01 -0.034 0.118 0.833 CD8_TEM L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 1.18e-02 -0.337 0.133 0.831 MAIT L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 8.03e-01 -0.0218 0.0875 0.831 MAIT L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 4.99e-01 0.0633 0.0934 0.831 MAIT L2
ENSG00000112357 PEX7 995154 sc-eQTL 4.83e-01 0.0833 0.119 0.831 MAIT L2
ENSG00000112378 PERP -289701 sc-eQTL 1.13e-01 0.196 0.123 0.831 MAIT L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 1.81e-02 -0.138 0.0581 0.831 MAIT L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 3.33e-01 -0.106 0.109 0.831 MAIT L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 5.02e-01 -0.0812 0.121 0.831 NK_CD56bright L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 8.89e-01 0.0132 0.0944 0.831 NK_CD56bright L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 6.90e-01 0.0412 0.103 0.831 NK_CD56bright L2
ENSG00000112357 PEX7 995154 sc-eQTL 8.85e-02 0.209 0.122 0.831 NK_CD56bright L2
ENSG00000112378 PERP -289701 sc-eQTL 2.66e-01 0.123 0.11 0.831 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 3.59e-02 -0.147 0.0695 0.831 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 5.92e-01 0.0602 0.112 0.831 NK_CD56bright L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 6.83e-02 -0.2 0.109 0.834 NK_CD56dim L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 5.19e-01 -0.0467 0.0723 0.834 NK_CD56dim L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 8.38e-01 0.0201 0.0978 0.834 NK_CD56dim L2
ENSG00000112357 PEX7 995154 sc-eQTL 3.82e-01 0.109 0.124 0.834 NK_CD56dim L2
ENSG00000112378 PERP -289701 sc-eQTL 1.78e-01 0.118 0.0872 0.834 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 1.79e-05 -0.286 0.0652 0.834 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 4.76e-01 -0.0729 0.102 0.834 NK_CD56dim L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 1.20e-01 0.195 0.125 0.829 NK_HLA L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 4.74e-01 0.0664 0.0925 0.829 NK_HLA L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 3.86e-01 -0.0931 0.107 0.829 NK_HLA L2
ENSG00000112357 PEX7 995154 sc-eQTL 3.93e-01 -0.101 0.117 0.829 NK_HLA L2
ENSG00000112378 PERP -289701 sc-eQTL 8.88e-01 0.0135 0.0954 0.829 NK_HLA L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 1.93e-03 -0.225 0.0716 0.829 NK_HLA L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 6.05e-01 -0.0612 0.118 0.829 NK_HLA L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 1.38e-01 -0.168 0.113 0.834 NK_cytokine L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 9.86e-01 -0.00137 0.0766 0.834 NK_cytokine L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 5.81e-01 -0.0541 0.0979 0.834 NK_cytokine L2
ENSG00000112357 PEX7 995154 sc-eQTL 4.44e-01 -0.0921 0.12 0.834 NK_cytokine L2
ENSG00000112378 PERP -289701 sc-eQTL 3.07e-01 0.0933 0.091 0.834 NK_cytokine L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 1.34e-07 -0.349 0.064 0.834 NK_cytokine L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 6.01e-01 -0.054 0.103 0.834 NK_cytokine L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 7.23e-01 0.0503 0.142 0.822 PB L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 9.00e-01 -0.0189 0.15 0.822 PB L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 6.59e-01 -0.0556 0.126 0.822 PB L2
ENSG00000112357 PEX7 995154 sc-eQTL 7.38e-01 0.0516 0.154 0.822 PB L2
ENSG00000112378 PERP -289701 sc-eQTL 9.55e-01 -0.0054 0.096 0.822 PB L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 9.45e-01 -0.00807 0.116 0.822 PB L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 3.12e-01 -0.141 0.139 0.822 PB L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 3.80e-01 0.112 0.128 0.828 Pro_T L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 4.84e-01 -0.0683 0.0975 0.828 Pro_T L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 8.93e-01 0.0138 0.102 0.828 Pro_T L2
ENSG00000112357 PEX7 995154 sc-eQTL 5.00e-01 -0.0799 0.118 0.828 Pro_T L2
ENSG00000112378 PERP -289701 sc-eQTL 3.81e-01 0.0826 0.0941 0.828 Pro_T L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 9.62e-01 0.00286 0.0595 0.828 Pro_T L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 2.99e-01 0.12 0.115 0.828 Pro_T L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 2.90e-01 0.128 0.121 0.831 Treg L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 2.84e-01 0.122 0.114 0.831 Treg L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 8.82e-01 -0.0123 0.0828 0.831 Treg L2
ENSG00000112357 PEX7 995154 sc-eQTL 6.07e-01 0.062 0.12 0.831 Treg L2
ENSG00000112378 PERP -289701 sc-eQTL 3.18e-01 0.13 0.13 0.831 Treg L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 2.38e-04 -0.263 0.0702 0.831 Treg L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 1.38e-01 -0.164 0.11 0.831 Treg L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 9.11e-01 0.0134 0.12 0.837 cDC L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 8.19e-01 0.0225 0.0977 0.837 cDC L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 9.48e-01 0.00566 0.0861 0.837 cDC L2
ENSG00000112357 PEX7 995154 sc-eQTL 2.94e-01 0.133 0.126 0.837 cDC L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 7.70e-01 0.0282 0.0964 0.837 cDC L2
ENSG00000135540 NHSL1 -874853 sc-eQTL 5.03e-01 -0.0749 0.112 0.837 cDC L2
ENSG00000225177 AL590617.2 -874830 sc-eQTL 4.24e-01 0.0985 0.123 0.837 cDC L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 2.51e-01 0.144 0.125 0.837 cDC L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 2.38e-02 -0.213 0.0934 0.831 cMono_IL1B L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 2.78e-01 -0.0747 0.0687 0.831 cMono_IL1B L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 4.35e-01 0.053 0.0678 0.831 cMono_IL1B L2
ENSG00000112357 PEX7 995154 sc-eQTL 1.53e-01 0.177 0.123 0.831 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 4.73e-01 -0.0532 0.0741 0.831 cMono_IL1B L2
ENSG00000135540 NHSL1 -874853 sc-eQTL 2.94e-01 -0.119 0.113 0.831 cMono_IL1B L2
ENSG00000225177 AL590617.2 -874830 sc-eQTL 1.96e-01 0.154 0.119 0.831 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 1.80e-04 -0.292 0.0766 0.831 cMono_IL1B L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 9.25e-02 0.18 0.106 0.831 cMono_S100A L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 3.38e-01 -0.0753 0.0785 0.831 cMono_S100A L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 8.01e-01 -0.0185 0.0733 0.831 cMono_S100A L2
ENSG00000112357 PEX7 995154 sc-eQTL 7.77e-01 -0.0358 0.126 0.831 cMono_S100A L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 7.93e-01 0.0183 0.0699 0.831 cMono_S100A L2
ENSG00000135540 NHSL1 -874853 sc-eQTL 1.82e-01 0.153 0.114 0.831 cMono_S100A L2
ENSG00000225177 AL590617.2 -874830 sc-eQTL 1.50e-01 0.181 0.125 0.831 cMono_S100A L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 4.30e-01 -0.0792 0.1 0.831 cMono_S100A L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 7.52e-02 0.26 0.145 0.827 gdT L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 4.30e-01 -0.0929 0.117 0.827 gdT L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 6.43e-01 0.065 0.14 0.827 gdT L2
ENSG00000112357 PEX7 995154 sc-eQTL 8.70e-01 -0.0245 0.149 0.827 gdT L2
ENSG00000112378 PERP -289701 sc-eQTL 9.79e-01 0.0034 0.13 0.827 gdT L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 4.12e-05 -0.288 0.0681 0.827 gdT L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 6.24e-02 -0.243 0.129 0.827 gdT L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 7.81e-02 0.221 0.125 0.831 intMono L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 9.63e-01 -0.00389 0.0848 0.831 intMono L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 9.78e-01 0.00229 0.0845 0.831 intMono L2
ENSG00000112357 PEX7 995154 sc-eQTL 1.03e-01 0.186 0.114 0.831 intMono L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 2.26e-02 -0.166 0.0723 0.831 intMono L2
ENSG00000135540 NHSL1 -874853 sc-eQTL 6.06e-01 0.0588 0.114 0.831 intMono L2
ENSG00000225177 AL590617.2 -874830 sc-eQTL 1.03e-01 0.208 0.127 0.831 intMono L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 1.81e-01 -0.146 0.109 0.831 intMono L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 2.18e-01 -0.146 0.118 0.839 ncMono L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 2.91e-01 0.106 0.1 0.839 ncMono L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 6.46e-01 0.0324 0.0705 0.839 ncMono L2
ENSG00000112357 PEX7 995154 sc-eQTL 5.78e-02 -0.236 0.124 0.839 ncMono L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 2.73e-01 -0.0976 0.0888 0.839 ncMono L2
ENSG00000135540 NHSL1 -874853 sc-eQTL 7.53e-01 0.0357 0.114 0.839 ncMono L2
ENSG00000225177 AL590617.2 -874830 sc-eQTL 9.81e-02 0.208 0.125 0.839 ncMono L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 2.30e-01 0.134 0.111 0.839 ncMono L2
ENSG00000024862 CCDC28A -955791 sc-eQTL 3.50e-02 -0.288 0.135 0.842 pDC L2
ENSG00000027697 IFNGR1 598269 sc-eQTL 6.45e-01 -0.0538 0.117 0.842 pDC L2
ENSG00000051620 HEBP2 -585813 sc-eQTL 1.17e-01 0.167 0.106 0.842 pDC L2
ENSG00000112357 PEX7 995154 sc-eQTL 1.03e-01 -0.209 0.127 0.842 pDC L2
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 4.41e-01 -0.0834 0.108 0.842 pDC L2
ENSG00000135540 NHSL1 -874853 sc-eQTL 8.52e-01 -0.0199 0.106 0.842 pDC L2
ENSG00000225177 AL590617.2 -874830 sc-eQTL 3.96e-01 0.0908 0.107 0.842 pDC L2
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 5.23e-01 -0.0702 0.11 0.842 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -955791 sc-eQTL 4.19e-01 0.0932 0.115 0.831 B_Memory LOneK1K
ENSG00000027697 IFNGR1 598269 sc-eQTL 5.65e-01 -0.0566 0.0983 0.831 B_Memory LOneK1K
ENSG00000051620 HEBP2 -585813 sc-eQTL 4.97e-02 0.156 0.0791 0.831 B_Memory LOneK1K
ENSG00000112357 PEX7 995154 sc-eQTL 3.60e-01 -0.104 0.113 0.831 B_Memory LOneK1K
ENSG00000112378 PERP -289701 sc-eQTL 4.48e-01 0.0798 0.105 0.831 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 3.36e-01 -0.0669 0.0693 0.831 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 3.68e-01 -0.106 0.117 0.831 B_Memory LOneK1K
ENSG00000024862 CCDC28A -955791 sc-eQTL 8.93e-01 -0.0144 0.106 0.831 B_Naive LOneK1K
ENSG00000027697 IFNGR1 598269 sc-eQTL 4.53e-01 0.0746 0.0993 0.831 B_Naive LOneK1K
ENSG00000051620 HEBP2 -585813 sc-eQTL 9.52e-01 -0.00443 0.0738 0.831 B_Naive LOneK1K
ENSG00000112357 PEX7 995154 sc-eQTL 5.59e-02 0.231 0.12 0.831 B_Naive LOneK1K
ENSG00000112378 PERP -289701 sc-eQTL 5.49e-01 0.0649 0.108 0.831 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 1.04e-02 -0.145 0.056 0.831 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 9.61e-01 -0.00494 0.101 0.831 B_Naive LOneK1K
ENSG00000024862 CCDC28A -955791 sc-eQTL 5.48e-01 -0.0519 0.0863 0.831 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 598269 sc-eQTL 2.80e-01 -0.0742 0.0686 0.831 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -585813 sc-eQTL 7.27e-01 0.0225 0.0644 0.831 CD14_Mono LOneK1K
ENSG00000112357 PEX7 995154 sc-eQTL 1.88e-01 0.163 0.123 0.831 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 4.19e-01 -0.0514 0.0635 0.831 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -874853 sc-eQTL 5.30e-01 -0.0711 0.113 0.831 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -874830 sc-eQTL 1.87e-01 0.16 0.121 0.831 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 4.10e-04 -0.266 0.074 0.831 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A -955791 sc-eQTL 6.49e-01 0.0536 0.118 0.832 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 598269 sc-eQTL 9.05e-01 -0.0098 0.0824 0.832 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -585813 sc-eQTL 8.63e-01 -0.0109 0.0629 0.832 CD16_Mono LOneK1K
ENSG00000112357 PEX7 995154 sc-eQTL 3.43e-01 -0.118 0.124 0.832 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 2.97e-01 -0.0802 0.0768 0.832 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -874853 sc-eQTL 3.99e-01 0.0943 0.112 0.832 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -874830 sc-eQTL 1.23e-01 0.19 0.123 0.832 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 9.91e-01 0.00115 0.103 0.832 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A -955791 sc-eQTL 2.46e-01 -0.123 0.106 0.834 NK_CD56dim LOneK1K
ENSG00000027697 IFNGR1 598269 sc-eQTL 9.31e-01 0.0064 0.074 0.834 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -585813 sc-eQTL 7.07e-01 -0.0346 0.0918 0.834 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 995154 sc-eQTL 7.81e-01 0.0347 0.125 0.834 NK_CD56dim LOneK1K
ENSG00000112378 PERP -289701 sc-eQTL 2.20e-01 0.0949 0.0772 0.834 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -49496 sc-eQTL 5.71e-06 -0.299 0.0642 0.834 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -50515 sc-eQTL 2.40e-01 -0.111 0.0941 0.834 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000118503 TNFAIP3 -49496 eQTL 3.95e-05 -0.0717 0.0174 0.0215 0.0188 0.154
ENSG00000220412 AL356234.1 110517 eQTL 0.000387 -0.114 0.0321 0.0102 0.00957 0.154
ENSG00000226004 AL591468.1 -128084 eQTL 0.00277 0.0903 0.0301 0.0 0.0 0.154
ENSG00000237499 AL357060.1 -50515 eQTL 2.44e-05 -0.0705 0.0166 0.0109 0.0102 0.154

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000051620 \N -585813 8.25e-07 6.42e-07 1.31e-07 4.32e-07 1.09e-07 3.24e-07 6.08e-07 1.4e-07 4.61e-07 2.62e-07 8.15e-07 4.75e-07 7.71e-07 1.59e-07 3.61e-07 2.36e-07 3.69e-07 3.95e-07 3.48e-07 1.71e-07 2.43e-07 4.38e-07 4.12e-07 1.76e-07 7.94e-07 2.49e-07 3.37e-07 2.69e-07 4.63e-07 7.36e-07 3.38e-07 7.69e-08 5.37e-08 1.25e-07 3.31e-07 1.44e-07 1.01e-07 1.36e-07 6.41e-08 2.17e-08 1.02e-07 6.81e-07 6.28e-08 5.93e-09 1.93e-07 1.46e-08 1.21e-07 4.41e-08 8.61e-08
ENSG00000226004 AL591468.1 -128084 9.7e-06 1.14e-05 1.68e-06 6.21e-06 2.54e-06 4.58e-06 1.14e-05 2.2e-06 9.95e-06 5.57e-06 1.33e-05 5.9e-06 1.5e-05 3.61e-06 3.49e-06 6.67e-06 4.99e-06 7.71e-06 3.09e-06 2.79e-06 6.11e-06 1.04e-05 8.65e-06 3.35e-06 1.37e-05 3.77e-06 6.12e-06 4.73e-06 1.1e-05 7.86e-06 6.28e-06 1.06e-06 1.17e-06 2.99e-06 4.77e-06 2.49e-06 1.72e-06 2e-06 2.01e-06 9.85e-07 9.91e-07 1.3e-05 1.6e-06 1.35e-07 7.75e-07 1.74e-06 1.8e-06 6.9e-07 5.7e-07