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Genes within 1Mb (chr6:137804692:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -968817 sc-eQTL 1.20e-01 0.12 0.077 0.299 B L1
ENSG00000027697 IFNGR1 585243 sc-eQTL 5.11e-01 0.0495 0.0753 0.299 B L1
ENSG00000051620 HEBP2 -598839 sc-eQTL 1.23e-01 -0.091 0.0588 0.299 B L1
ENSG00000112357 PEX7 982128 sc-eQTL 6.65e-01 0.0387 0.0892 0.299 B L1
ENSG00000112378 PERP -302727 sc-eQTL 2.84e-01 0.0632 0.0589 0.299 B L1
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 9.38e-01 0.00369 0.0475 0.299 B L1
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 7.48e-01 -0.0241 0.0748 0.299 B L1
ENSG00000024862 CCDC28A -968817 sc-eQTL 4.43e-01 0.0657 0.0855 0.299 CD4T L1
ENSG00000027697 IFNGR1 585243 sc-eQTL 3.43e-01 0.0475 0.05 0.299 CD4T L1
ENSG00000051620 HEBP2 -598839 sc-eQTL 5.54e-01 -0.034 0.0574 0.299 CD4T L1
ENSG00000112357 PEX7 982128 sc-eQTL 2.40e-01 -0.0947 0.0804 0.299 CD4T L1
ENSG00000112378 PERP -302727 sc-eQTL 2.93e-01 0.0569 0.054 0.299 CD4T L1
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 3.12e-01 -0.0513 0.0506 0.299 CD4T L1
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 6.19e-01 0.0318 0.0638 0.299 CD4T L1
ENSG00000024862 CCDC28A -968817 sc-eQTL 4.36e-01 0.0722 0.0925 0.299 CD8T L1
ENSG00000027697 IFNGR1 585243 sc-eQTL 9.47e-01 0.00376 0.0567 0.299 CD8T L1
ENSG00000051620 HEBP2 -598839 sc-eQTL 8.74e-01 0.00961 0.0606 0.299 CD8T L1
ENSG00000112357 PEX7 982128 sc-eQTL 8.75e-01 -0.0149 0.0945 0.299 CD8T L1
ENSG00000112378 PERP -302727 sc-eQTL 1.02e-01 -0.101 0.0614 0.299 CD8T L1
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 4.53e-02 -0.0951 0.0472 0.299 CD8T L1
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 2.08e-01 -0.0882 0.0698 0.299 CD8T L1
ENSG00000024862 CCDC28A -968817 sc-eQTL 2.51e-01 -0.108 0.0937 0.293 DC L1
ENSG00000027697 IFNGR1 585243 sc-eQTL 5.12e-01 0.0458 0.0697 0.293 DC L1
ENSG00000051620 HEBP2 -598839 sc-eQTL 1.58e-01 -0.0931 0.0657 0.293 DC L1
ENSG00000112357 PEX7 982128 sc-eQTL 1.82e-01 -0.131 0.0978 0.293 DC L1
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 8.67e-01 -0.0125 0.0745 0.293 DC L1
ENSG00000135540 NHSL1 -887879 sc-eQTL 7.18e-01 -0.0311 0.0861 0.293 DC L1
ENSG00000225177 AL590617.2 -887856 sc-eQTL 6.68e-01 0.0386 0.09 0.293 DC L1
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 5.36e-01 -0.047 0.0759 0.293 DC L1
ENSG00000024862 CCDC28A -968817 sc-eQTL 9.45e-01 0.00459 0.0666 0.299 Mono L1
ENSG00000027697 IFNGR1 585243 sc-eQTL 8.88e-01 0.00797 0.0568 0.299 Mono L1
ENSG00000051620 HEBP2 -598839 sc-eQTL 3.24e-02 -0.0982 0.0456 0.299 Mono L1
ENSG00000112357 PEX7 982128 sc-eQTL 7.23e-01 -0.0339 0.0956 0.299 Mono L1
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 8.94e-01 0.00646 0.0482 0.299 Mono L1
ENSG00000135540 NHSL1 -887879 sc-eQTL 4.13e-01 -0.0713 0.0869 0.299 Mono L1
ENSG00000225177 AL590617.2 -887856 sc-eQTL 8.39e-01 -0.0184 0.0905 0.299 Mono L1
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 2.06e-01 -0.0755 0.0595 0.299 Mono L1
ENSG00000024862 CCDC28A -968817 sc-eQTL 5.39e-01 0.0507 0.0824 0.298 NK L1
ENSG00000027697 IFNGR1 585243 sc-eQTL 2.18e-01 -0.078 0.0632 0.298 NK L1
ENSG00000051620 HEBP2 -598839 sc-eQTL 2.41e-01 -0.0852 0.0724 0.298 NK L1
ENSG00000112357 PEX7 982128 sc-eQTL 3.17e-01 -0.098 0.0977 0.298 NK L1
ENSG00000112378 PERP -302727 sc-eQTL 5.23e-01 -0.0394 0.0616 0.298 NK L1
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 2.98e-01 -0.055 0.0527 0.298 NK L1
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 8.02e-03 -0.197 0.0736 0.298 NK L1
ENSG00000024862 CCDC28A -968817 sc-eQTL 9.18e-01 0.0101 0.0988 0.299 Other_T L1
ENSG00000027697 IFNGR1 585243 sc-eQTL 3.18e-01 -0.0601 0.06 0.299 Other_T L1
ENSG00000051620 HEBP2 -598839 sc-eQTL 9.02e-01 -0.00783 0.0638 0.299 Other_T L1
ENSG00000112357 PEX7 982128 sc-eQTL 3.22e-02 -0.209 0.097 0.299 Other_T L1
ENSG00000112378 PERP -302727 sc-eQTL 4.74e-03 -0.22 0.0772 0.299 Other_T L1
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 2.58e-01 -0.0423 0.0373 0.299 Other_T L1
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 1.69e-02 -0.177 0.0733 0.299 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -968817 sc-eQTL 9.99e-01 8.45e-05 0.11 0.288 B_Activated L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 4.16e-02 0.199 0.0969 0.288 B_Activated L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 5.79e-01 -0.0534 0.096 0.288 B_Activated L2
ENSG00000112357 PEX7 982128 sc-eQTL 2.14e-01 -0.12 0.096 0.288 B_Activated L2
ENSG00000112378 PERP -302727 sc-eQTL 8.58e-01 0.00897 0.0499 0.288 B_Activated L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 3.87e-01 0.0838 0.0966 0.288 B_Activated L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 7.05e-01 -0.032 0.0845 0.288 B_Activated L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 1.14e-01 0.152 0.0954 0.298 B_Intermediate L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 4.21e-01 0.0714 0.0886 0.298 B_Intermediate L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 6.85e-02 -0.121 0.066 0.298 B_Intermediate L2
ENSG00000112357 PEX7 982128 sc-eQTL 4.87e-01 -0.0645 0.0927 0.298 B_Intermediate L2
ENSG00000112378 PERP -302727 sc-eQTL 5.11e-01 0.0557 0.0845 0.298 B_Intermediate L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 9.28e-01 0.00603 0.0664 0.298 B_Intermediate L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 3.12e-01 0.0953 0.094 0.298 B_Intermediate L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 1.08e-01 0.16 0.0995 0.295 B_Memory L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 7.74e-01 -0.0284 0.0988 0.295 B_Memory L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 4.06e-01 0.0626 0.0752 0.295 B_Memory L2
ENSG00000112357 PEX7 982128 sc-eQTL 9.16e-01 -0.0106 0.0998 0.295 B_Memory L2
ENSG00000112378 PERP -302727 sc-eQTL 5.56e-02 -0.179 0.0931 0.295 B_Memory L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 4.88e-01 0.0448 0.0645 0.295 B_Memory L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 4.67e-01 0.0699 0.096 0.295 B_Memory L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 2.84e-01 0.0976 0.091 0.299 B_Naive1 L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 9.76e-01 0.00225 0.0754 0.299 B_Naive1 L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 1.92e-01 -0.0836 0.0639 0.299 B_Naive1 L2
ENSG00000112357 PEX7 982128 sc-eQTL 5.54e-01 0.059 0.0994 0.299 B_Naive1 L2
ENSG00000112378 PERP -302727 sc-eQTL 8.97e-01 -0.0113 0.087 0.299 B_Naive1 L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 5.88e-01 -0.0273 0.0504 0.299 B_Naive1 L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 6.13e-01 0.04 0.079 0.299 B_Naive1 L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 6.19e-01 0.0444 0.0892 0.298 B_Naive2 L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 4.47e-01 0.0699 0.0918 0.298 B_Naive2 L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 2.08e-01 -0.0768 0.0608 0.298 B_Naive2 L2
ENSG00000112357 PEX7 982128 sc-eQTL 2.76e-01 0.11 0.1 0.298 B_Naive2 L2
ENSG00000112378 PERP -302727 sc-eQTL 4.19e-01 -0.0592 0.0732 0.298 B_Naive2 L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 7.17e-01 -0.0266 0.0732 0.298 B_Naive2 L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 6.04e-01 -0.0492 0.0947 0.298 B_Naive2 L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 7.27e-01 0.0329 0.0941 0.3 CD4_CTL L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 9.33e-01 -0.00746 0.0881 0.3 CD4_CTL L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 2.22e-01 -0.0993 0.081 0.3 CD4_CTL L2
ENSG00000112357 PEX7 982128 sc-eQTL 5.49e-01 0.0586 0.0977 0.3 CD4_CTL L2
ENSG00000112378 PERP -302727 sc-eQTL 5.24e-01 -0.0632 0.099 0.3 CD4_CTL L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 9.85e-01 0.00112 0.0578 0.3 CD4_CTL L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 9.28e-01 -0.00812 0.0899 0.3 CD4_CTL L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 9.81e-01 0.00214 0.0905 0.299 CD4_Naive L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 1.08e-01 0.0768 0.0475 0.299 CD4_Naive L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 9.85e-01 0.00107 0.0564 0.299 CD4_Naive L2
ENSG00000112357 PEX7 982128 sc-eQTL 5.34e-01 -0.0562 0.0902 0.299 CD4_Naive L2
ENSG00000112378 PERP -302727 sc-eQTL 1.99e-01 0.0957 0.0743 0.299 CD4_Naive L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 2.51e-01 -0.06 0.0521 0.299 CD4_Naive L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 2.89e-01 0.0718 0.0676 0.299 CD4_Naive L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 8.70e-01 0.0145 0.0889 0.299 CD4_TCM L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 7.39e-01 0.0223 0.0668 0.299 CD4_TCM L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 3.35e-01 -0.0637 0.066 0.299 CD4_TCM L2
ENSG00000112357 PEX7 982128 sc-eQTL 3.83e-02 -0.202 0.0971 0.299 CD4_TCM L2
ENSG00000112378 PERP -302727 sc-eQTL 7.26e-01 -0.0291 0.0829 0.299 CD4_TCM L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 2.63e-01 -0.0538 0.048 0.299 CD4_TCM L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 3.20e-01 -0.0671 0.0673 0.299 CD4_TCM L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 5.90e-01 0.0547 0.101 0.299 CD4_TEM L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 7.84e-01 0.0211 0.0768 0.299 CD4_TEM L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 6.66e-01 0.0299 0.0691 0.299 CD4_TEM L2
ENSG00000112357 PEX7 982128 sc-eQTL 5.39e-01 -0.0609 0.0991 0.299 CD4_TEM L2
ENSG00000112378 PERP -302727 sc-eQTL 4.00e-01 0.0677 0.0803 0.299 CD4_TEM L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 6.13e-01 0.0258 0.051 0.299 CD4_TEM L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 7.41e-01 0.027 0.0818 0.299 CD4_TEM L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 7.71e-01 -0.0295 0.101 0.299 CD8_CTL L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 3.40e-01 -0.0649 0.0679 0.299 CD8_CTL L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 9.30e-01 0.00638 0.0722 0.299 CD8_CTL L2
ENSG00000112357 PEX7 982128 sc-eQTL 1.83e-01 -0.125 0.0932 0.299 CD8_CTL L2
ENSG00000112378 PERP -302727 sc-eQTL 6.30e-01 -0.0434 0.09 0.299 CD8_CTL L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 1.64e-01 -0.0797 0.057 0.299 CD8_CTL L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 2.60e-01 -0.0907 0.0803 0.299 CD8_CTL L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 4.97e-01 0.0658 0.0968 0.299 CD8_Naive L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 3.33e-01 0.0655 0.0675 0.299 CD8_Naive L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 4.39e-01 -0.0479 0.0619 0.299 CD8_Naive L2
ENSG00000112357 PEX7 982128 sc-eQTL 3.52e-01 0.0912 0.0978 0.299 CD8_Naive L2
ENSG00000112378 PERP -302727 sc-eQTL 7.54e-01 -0.0234 0.0745 0.299 CD8_Naive L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 4.18e-01 -0.0429 0.0528 0.299 CD8_Naive L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 5.26e-01 -0.0496 0.0781 0.299 CD8_Naive L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 1.14e-01 -0.173 0.109 0.296 CD8_TCM L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 5.39e-01 -0.0555 0.0902 0.296 CD8_TCM L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 3.30e-01 -0.0749 0.0767 0.296 CD8_TCM L2
ENSG00000112357 PEX7 982128 sc-eQTL 5.53e-01 0.0615 0.104 0.296 CD8_TCM L2
ENSG00000112378 PERP -302727 sc-eQTL 4.18e-01 -0.0823 0.101 0.296 CD8_TCM L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 1.82e-01 -0.0652 0.0487 0.296 CD8_TCM L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 5.85e-01 -0.0489 0.0895 0.296 CD8_TCM L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 1.87e-02 0.233 0.0983 0.295 CD8_TEM L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 3.90e-01 -0.0742 0.0862 0.295 CD8_TEM L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 7.53e-01 -0.0285 0.0906 0.295 CD8_TEM L2
ENSG00000112357 PEX7 982128 sc-eQTL 9.17e-01 0.0103 0.0994 0.295 CD8_TEM L2
ENSG00000112378 PERP -302727 sc-eQTL 7.63e-01 -0.0311 0.103 0.295 CD8_TEM L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 3.30e-01 -0.062 0.0635 0.295 CD8_TEM L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 7.20e-01 -0.0338 0.0944 0.295 CD8_TEM L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 9.80e-01 0.00263 0.105 0.297 MAIT L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 4.04e-01 0.0569 0.0681 0.297 MAIT L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 9.26e-01 -0.00675 0.0729 0.297 MAIT L2
ENSG00000112357 PEX7 982128 sc-eQTL 8.10e-01 -0.0222 0.0924 0.297 MAIT L2
ENSG00000112378 PERP -302727 sc-eQTL 6.53e-03 -0.26 0.0947 0.297 MAIT L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 7.63e-01 -0.0138 0.0459 0.297 MAIT L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 6.91e-02 -0.154 0.0842 0.297 MAIT L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 3.72e-01 0.085 0.0951 0.3 NK_CD56bright L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 9.39e-01 0.00574 0.0743 0.3 NK_CD56bright L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 4.70e-01 -0.0586 0.081 0.3 NK_CD56bright L2
ENSG00000112357 PEX7 982128 sc-eQTL 9.48e-01 0.00633 0.0969 0.3 NK_CD56bright L2
ENSG00000112378 PERP -302727 sc-eQTL 2.34e-01 0.103 0.0865 0.3 NK_CD56bright L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 8.62e-01 -0.00963 0.0553 0.3 NK_CD56bright L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 3.26e-01 -0.0866 0.088 0.3 NK_CD56bright L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 6.20e-01 0.0442 0.0892 0.297 NK_CD56dim L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 1.64e-01 -0.0815 0.0583 0.297 NK_CD56dim L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 3.79e-01 -0.0697 0.079 0.297 NK_CD56dim L2
ENSG00000112357 PEX7 982128 sc-eQTL 2.09e-01 0.127 0.101 0.297 NK_CD56dim L2
ENSG00000112378 PERP -302727 sc-eQTL 4.25e-01 -0.0567 0.0709 0.297 NK_CD56dim L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 7.92e-02 -0.0967 0.0548 0.297 NK_CD56dim L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 1.25e-02 -0.205 0.0815 0.297 NK_CD56dim L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 3.99e-01 0.0882 0.104 0.299 NK_HLA L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 4.13e-01 -0.0629 0.0767 0.299 NK_HLA L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 1.33e-01 -0.133 0.0885 0.299 NK_HLA L2
ENSG00000112357 PEX7 982128 sc-eQTL 1.41e-02 -0.238 0.0961 0.299 NK_HLA L2
ENSG00000112378 PERP -302727 sc-eQTL 3.55e-01 -0.0732 0.079 0.299 NK_HLA L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 2.54e-01 -0.0694 0.0607 0.299 NK_HLA L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 1.05e-01 -0.159 0.0974 0.299 NK_HLA L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 8.67e-01 0.0155 0.0922 0.297 NK_cytokine L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 1.67e-01 -0.0858 0.0619 0.297 NK_cytokine L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 6.08e-01 -0.0408 0.0794 0.297 NK_cytokine L2
ENSG00000112357 PEX7 982128 sc-eQTL 1.92e-03 -0.3 0.0954 0.297 NK_cytokine L2
ENSG00000112378 PERP -302727 sc-eQTL 7.40e-01 0.0246 0.074 0.297 NK_cytokine L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 4.21e-01 -0.0447 0.0554 0.297 NK_cytokine L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 2.34e-01 -0.0995 0.0834 0.297 NK_cytokine L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 2.54e-01 0.127 0.11 0.281 PB L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 4.90e-01 0.0812 0.117 0.281 PB L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 4.80e-01 -0.0698 0.0985 0.281 PB L2
ENSG00000112357 PEX7 982128 sc-eQTL 7.33e-01 0.0412 0.12 0.281 PB L2
ENSG00000112378 PERP -302727 sc-eQTL 9.26e-01 0.007 0.0752 0.281 PB L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 5.36e-01 -0.0566 0.0911 0.281 PB L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 5.83e-01 -0.0602 0.109 0.281 PB L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 4.38e-01 0.0786 0.101 0.298 Pro_T L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 4.10e-01 -0.0637 0.0771 0.298 Pro_T L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 8.31e-01 0.0173 0.0807 0.298 Pro_T L2
ENSG00000112357 PEX7 982128 sc-eQTL 5.31e-01 -0.0588 0.0937 0.298 Pro_T L2
ENSG00000112378 PERP -302727 sc-eQTL 2.56e-01 -0.0846 0.0744 0.298 Pro_T L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 1.25e-01 -0.0721 0.0468 0.298 Pro_T L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 4.00e-01 -0.0768 0.0911 0.298 Pro_T L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 1.35e-02 0.236 0.0947 0.299 Treg L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 5.04e-01 0.0604 0.0904 0.299 Treg L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 9.96e-01 0.000368 0.0657 0.299 Treg L2
ENSG00000112357 PEX7 982128 sc-eQTL 9.49e-01 -0.00607 0.0956 0.299 Treg L2
ENSG00000112378 PERP -302727 sc-eQTL 5.20e-01 0.0666 0.103 0.299 Treg L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 4.54e-02 -0.115 0.057 0.299 Treg L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 9.33e-01 0.00734 0.0877 0.299 Treg L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 6.29e-01 -0.046 0.095 0.302 cDC L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 7.49e-01 0.0248 0.0774 0.302 cDC L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 6.09e-02 -0.127 0.0675 0.302 cDC L2
ENSG00000112357 PEX7 982128 sc-eQTL 7.05e-01 -0.0379 0.1 0.302 cDC L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 7.06e-01 0.0289 0.0763 0.302 cDC L2
ENSG00000135540 NHSL1 -887879 sc-eQTL 4.74e-01 -0.0634 0.0883 0.302 cDC L2
ENSG00000225177 AL590617.2 -887856 sc-eQTL 6.07e-01 -0.0502 0.0976 0.302 cDC L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 5.21e-01 -0.0639 0.0993 0.302 cDC L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 7.46e-01 -0.0238 0.0735 0.299 cMono_IL1B L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 5.22e-01 -0.0343 0.0535 0.299 cMono_IL1B L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 2.06e-01 -0.0668 0.0526 0.299 cMono_IL1B L2
ENSG00000112357 PEX7 982128 sc-eQTL 6.95e-01 0.0378 0.0964 0.299 cMono_IL1B L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 8.20e-01 -0.0131 0.0577 0.299 cMono_IL1B L2
ENSG00000135540 NHSL1 -887879 sc-eQTL 5.39e-01 -0.0544 0.0884 0.299 cMono_IL1B L2
ENSG00000225177 AL590617.2 -887856 sc-eQTL 5.33e-01 -0.0578 0.0926 0.299 cMono_IL1B L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 9.35e-03 -0.159 0.0606 0.299 cMono_IL1B L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 3.03e-01 0.0873 0.0845 0.299 cMono_S100A L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 5.61e-01 0.0362 0.0622 0.299 cMono_S100A L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 1.00e-02 -0.148 0.0571 0.299 cMono_S100A L2
ENSG00000112357 PEX7 982128 sc-eQTL 4.21e-01 -0.0803 0.0997 0.299 cMono_S100A L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 5.11e-01 0.0364 0.0552 0.299 cMono_S100A L2
ENSG00000135540 NHSL1 -887879 sc-eQTL 4.54e-01 0.068 0.0906 0.299 cMono_S100A L2
ENSG00000225177 AL590617.2 -887856 sc-eQTL 3.76e-01 0.0881 0.0992 0.299 cMono_S100A L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 9.97e-01 0.00034 0.0794 0.299 cMono_S100A L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 4.30e-01 0.0925 0.117 0.3 gdT L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 7.14e-02 -0.168 0.0927 0.3 gdT L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 8.55e-02 -0.191 0.111 0.3 gdT L2
ENSG00000112357 PEX7 982128 sc-eQTL 4.11e-01 -0.0979 0.119 0.3 gdT L2
ENSG00000112378 PERP -302727 sc-eQTL 3.44e-01 -0.0983 0.103 0.3 gdT L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 5.37e-01 -0.0356 0.0576 0.3 gdT L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 4.24e-01 -0.0836 0.104 0.3 gdT L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 4.04e-01 0.0836 0.1 0.3 intMono L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 4.79e-01 -0.0478 0.0674 0.3 intMono L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 2.97e-01 -0.0702 0.0671 0.3 intMono L2
ENSG00000112357 PEX7 982128 sc-eQTL 2.72e-01 -0.1 0.0907 0.3 intMono L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 1.66e-01 -0.0806 0.058 0.3 intMono L2
ENSG00000135540 NHSL1 -887879 sc-eQTL 1.85e-01 -0.12 0.0904 0.3 intMono L2
ENSG00000225177 AL590617.2 -887856 sc-eQTL 8.97e-01 -0.0132 0.102 0.3 intMono L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 2.66e-01 -0.0966 0.0866 0.3 intMono L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 8.85e-01 -0.013 0.0901 0.305 ncMono L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 5.48e-01 0.0461 0.0766 0.305 ncMono L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 3.72e-01 -0.048 0.0536 0.305 ncMono L2
ENSG00000112357 PEX7 982128 sc-eQTL 2.86e-01 -0.101 0.0947 0.305 ncMono L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 9.64e-01 0.00302 0.0678 0.305 ncMono L2
ENSG00000135540 NHSL1 -887879 sc-eQTL 2.29e-01 -0.104 0.0862 0.305 ncMono L2
ENSG00000225177 AL590617.2 -887856 sc-eQTL 6.41e-02 0.177 0.0953 0.305 ncMono L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 6.56e-03 0.229 0.0833 0.305 ncMono L2
ENSG00000024862 CCDC28A -968817 sc-eQTL 9.87e-01 0.00169 0.107 0.305 pDC L2
ENSG00000027697 IFNGR1 585243 sc-eQTL 9.57e-01 0.00489 0.0911 0.305 pDC L2
ENSG00000051620 HEBP2 -598839 sc-eQTL 2.72e-01 -0.0916 0.0832 0.305 pDC L2
ENSG00000112357 PEX7 982128 sc-eQTL 4.11e-02 -0.204 0.0989 0.305 pDC L2
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 2.02e-01 -0.108 0.084 0.305 pDC L2
ENSG00000135540 NHSL1 -887879 sc-eQTL 8.82e-01 -0.0124 0.0831 0.305 pDC L2
ENSG00000225177 AL590617.2 -887856 sc-eQTL 2.13e-01 0.104 0.0831 0.305 pDC L2
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 4.22e-01 -0.0688 0.0855 0.305 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -968817 sc-eQTL 5.13e-02 0.179 0.0914 0.299 B_Memory LOneK1K
ENSG00000027697 IFNGR1 585243 sc-eQTL 3.29e-01 0.0768 0.0785 0.299 B_Memory LOneK1K
ENSG00000051620 HEBP2 -598839 sc-eQTL 2.82e-01 -0.0686 0.0637 0.299 B_Memory LOneK1K
ENSG00000112357 PEX7 982128 sc-eQTL 9.17e-01 0.00947 0.0905 0.299 B_Memory LOneK1K
ENSG00000112378 PERP -302727 sc-eQTL 3.31e-01 -0.0818 0.0839 0.299 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 3.79e-01 0.0488 0.0554 0.299 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 4.10e-02 0.191 0.093 0.299 B_Memory LOneK1K
ENSG00000024862 CCDC28A -968817 sc-eQTL 1.68e-01 0.117 0.0845 0.299 B_Naive LOneK1K
ENSG00000027697 IFNGR1 585243 sc-eQTL 7.78e-01 0.0224 0.0793 0.299 B_Naive LOneK1K
ENSG00000051620 HEBP2 -598839 sc-eQTL 1.34e-01 -0.0881 0.0585 0.299 B_Naive LOneK1K
ENSG00000112357 PEX7 982128 sc-eQTL 1.14e-01 0.152 0.096 0.299 B_Naive LOneK1K
ENSG00000112378 PERP -302727 sc-eQTL 6.48e-01 -0.0395 0.0864 0.299 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 8.01e-01 -0.0115 0.0454 0.299 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 6.92e-01 -0.032 0.0808 0.299 B_Naive LOneK1K
ENSG00000024862 CCDC28A -968817 sc-eQTL 6.64e-01 0.0293 0.0675 0.299 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 585243 sc-eQTL 8.92e-01 -0.00729 0.0537 0.299 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -598839 sc-eQTL 6.51e-02 -0.0925 0.0499 0.299 CD14_Mono LOneK1K
ENSG00000112357 PEX7 982128 sc-eQTL 6.92e-01 0.0382 0.0964 0.299 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 7.46e-01 -0.0161 0.0497 0.299 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -887879 sc-eQTL 7.06e-01 -0.0334 0.0885 0.299 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -887856 sc-eQTL 9.21e-01 -0.00943 0.095 0.299 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 7.37e-02 -0.106 0.0591 0.299 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A -968817 sc-eQTL 8.57e-01 0.0165 0.0916 0.297 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 585243 sc-eQTL 9.40e-01 -0.00486 0.0641 0.297 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -598839 sc-eQTL 1.34e-01 -0.0732 0.0486 0.297 CD16_Mono LOneK1K
ENSG00000112357 PEX7 982128 sc-eQTL 3.93e-01 -0.0826 0.0965 0.297 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 4.46e-01 -0.0456 0.0598 0.297 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -887879 sc-eQTL 8.52e-02 -0.149 0.0863 0.297 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -887856 sc-eQTL 8.83e-01 0.0142 0.0961 0.297 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 7.54e-01 0.0252 0.0802 0.297 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A -968817 sc-eQTL 6.43e-01 0.0398 0.0858 0.297 NK_CD56dim LOneK1K
ENSG00000027697 IFNGR1 585243 sc-eQTL 2.82e-01 -0.0646 0.0598 0.297 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -598839 sc-eQTL 3.41e-01 -0.0709 0.0743 0.297 NK_CD56dim LOneK1K
ENSG00000112357 PEX7 982128 sc-eQTL 1.69e-01 -0.139 0.101 0.297 NK_CD56dim LOneK1K
ENSG00000112378 PERP -302727 sc-eQTL 3.91e-01 -0.0539 0.0627 0.297 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 -62522 sc-eQTL 3.57e-01 -0.0504 0.0546 0.297 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 -63541 sc-eQTL 1.65e-02 -0.182 0.0754 0.297 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000016402 IL20RA 759512 pQTL 0.0509 -0.0669 0.0343 0.00113 0.0 0.264
ENSG00000118503 TNFAIP3 -62522 eQTL 0.0162 -0.0348 0.0144 0.0 0.0 0.261
ENSG00000220412 AL356234.1 97491 eQTL 0.0289 -0.0584 0.0267 0.0013 0.0 0.261

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina