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Genes within 1Mb (chr6:138123602:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -649907 sc-eQTL 2.57e-01 -0.0845 0.0743 0.496 B L1
ENSG00000027697 IFNGR1 904153 sc-eQTL 3.35e-01 0.0699 0.0724 0.496 B L1
ENSG00000051620 HEBP2 -279929 sc-eQTL 1.10e-01 0.0907 0.0566 0.496 B L1
ENSG00000112378 PERP 16183 sc-eQTL 4.50e-01 -0.0429 0.0567 0.496 B L1
ENSG00000118503 TNFAIP3 256388 sc-eQTL 9.15e-01 -0.00487 0.0458 0.496 B L1
ENSG00000135597 REPS1 -864659 sc-eQTL 3.25e-01 0.063 0.0639 0.496 B L1
ENSG00000146386 ABRACL -905143 sc-eQTL 6.59e-01 -0.0167 0.0376 0.496 B L1
ENSG00000237499 WAKMAR2 255369 sc-eQTL 5.19e-01 -0.0464 0.0719 0.496 B L1
ENSG00000024862 CCDC28A -649907 sc-eQTL 3.19e-01 -0.0824 0.0826 0.496 CD4T L1
ENSG00000027697 IFNGR1 904153 sc-eQTL 4.17e-01 0.0394 0.0484 0.496 CD4T L1
ENSG00000051620 HEBP2 -279929 sc-eQTL 6.97e-02 0.1 0.0551 0.496 CD4T L1
ENSG00000112378 PERP 16183 sc-eQTL 6.82e-03 0.141 0.0515 0.496 CD4T L1
ENSG00000118503 TNFAIP3 256388 sc-eQTL 4.11e-01 0.0404 0.049 0.496 CD4T L1
ENSG00000135597 REPS1 -864659 sc-eQTL 6.33e-01 0.0259 0.0542 0.496 CD4T L1
ENSG00000146386 ABRACL -905143 sc-eQTL 5.85e-01 0.0218 0.0398 0.496 CD4T L1
ENSG00000237499 WAKMAR2 255369 sc-eQTL 8.46e-01 0.012 0.0618 0.496 CD4T L1
ENSG00000024862 CCDC28A -649907 sc-eQTL 7.68e-01 0.0266 0.0899 0.496 CD8T L1
ENSG00000027697 IFNGR1 904153 sc-eQTL 7.07e-01 -0.0207 0.055 0.496 CD8T L1
ENSG00000051620 HEBP2 -279929 sc-eQTL 8.13e-02 0.102 0.0585 0.496 CD8T L1
ENSG00000112378 PERP 16183 sc-eQTL 1.51e-01 0.0859 0.0597 0.496 CD8T L1
ENSG00000118503 TNFAIP3 256388 sc-eQTL 6.68e-01 0.0199 0.0463 0.496 CD8T L1
ENSG00000135597 REPS1 -864659 sc-eQTL 5.18e-01 -0.0392 0.0605 0.496 CD8T L1
ENSG00000146386 ABRACL -905143 sc-eQTL 9.30e-01 0.00305 0.0345 0.496 CD8T L1
ENSG00000237499 WAKMAR2 255369 sc-eQTL 6.50e-01 0.0309 0.068 0.496 CD8T L1
ENSG00000024862 CCDC28A -649907 sc-eQTL 2.36e-01 0.109 0.0913 0.493 DC L1
ENSG00000027697 IFNGR1 904153 sc-eQTL 4.38e-01 0.0528 0.0679 0.493 DC L1
ENSG00000051620 HEBP2 -279929 sc-eQTL 9.10e-01 -0.00728 0.0644 0.493 DC L1
ENSG00000118503 TNFAIP3 256388 sc-eQTL 9.60e-01 0.00369 0.0727 0.493 DC L1
ENSG00000135540 NHSL1 -568969 sc-eQTL 1.91e-01 0.11 0.0836 0.493 DC L1
ENSG00000135597 REPS1 -864659 sc-eQTL 8.97e-01 -0.00965 0.0743 0.493 DC L1
ENSG00000146386 ABRACL -905143 sc-eQTL 6.82e-01 -0.0298 0.0727 0.493 DC L1
ENSG00000225177 AL590617.2 -568946 sc-eQTL 3.76e-01 0.0778 0.0877 0.493 DC L1
ENSG00000237499 WAKMAR2 255369 sc-eQTL 8.32e-01 0.0158 0.074 0.493 DC L1
ENSG00000024862 CCDC28A -649907 sc-eQTL 2.79e-01 -0.0706 0.065 0.496 Mono L1
ENSG00000027697 IFNGR1 904153 sc-eQTL 2.30e-01 0.0667 0.0554 0.496 Mono L1
ENSG00000051620 HEBP2 -279929 sc-eQTL 2.36e-01 0.0534 0.045 0.496 Mono L1
ENSG00000118503 TNFAIP3 256388 sc-eQTL 8.86e-01 -0.00677 0.0472 0.496 Mono L1
ENSG00000135540 NHSL1 -568969 sc-eQTL 9.62e-01 0.00406 0.0852 0.496 Mono L1
ENSG00000135597 REPS1 -864659 sc-eQTL 9.65e-01 0.00221 0.0499 0.496 Mono L1
ENSG00000146386 ABRACL -905143 sc-eQTL 3.41e-01 -0.0618 0.0648 0.496 Mono L1
ENSG00000225177 AL590617.2 -568946 sc-eQTL 3.00e-01 0.0918 0.0884 0.496 Mono L1
ENSG00000237499 WAKMAR2 255369 sc-eQTL 7.40e-01 -0.0194 0.0584 0.496 Mono L1
ENSG00000024862 CCDC28A -649907 sc-eQTL 5.76e-01 -0.0445 0.0794 0.496 NK L1
ENSG00000027697 IFNGR1 904153 sc-eQTL 5.82e-01 -0.0337 0.0611 0.496 NK L1
ENSG00000051620 HEBP2 -279929 sc-eQTL 2.52e-01 0.0802 0.0698 0.496 NK L1
ENSG00000112378 PERP 16183 sc-eQTL 9.38e-01 -0.00459 0.0594 0.496 NK L1
ENSG00000118503 TNFAIP3 256388 sc-eQTL 8.50e-01 0.00966 0.0509 0.496 NK L1
ENSG00000135597 REPS1 -864659 sc-eQTL 8.55e-01 -0.012 0.0654 0.496 NK L1
ENSG00000146386 ABRACL -905143 sc-eQTL 6.09e-01 -0.0244 0.0477 0.496 NK L1
ENSG00000237499 WAKMAR2 255369 sc-eQTL 6.39e-01 0.0338 0.072 0.496 NK L1
ENSG00000024862 CCDC28A -649907 sc-eQTL 9.06e-01 0.0111 0.0943 0.496 Other_T L1
ENSG00000027697 IFNGR1 904153 sc-eQTL 3.97e-01 0.0487 0.0573 0.496 Other_T L1
ENSG00000051620 HEBP2 -279929 sc-eQTL 1.31e-01 0.0918 0.0605 0.496 Other_T L1
ENSG00000112378 PERP 16183 sc-eQTL 3.14e-01 -0.0756 0.0749 0.496 Other_T L1
ENSG00000118503 TNFAIP3 256388 sc-eQTL 8.40e-01 -0.00724 0.0357 0.496 Other_T L1
ENSG00000135597 REPS1 -864659 sc-eQTL 3.11e-01 0.0743 0.0732 0.496 Other_T L1
ENSG00000146386 ABRACL -905143 sc-eQTL 6.89e-02 -0.0872 0.0477 0.496 Other_T L1
ENSG00000237499 WAKMAR2 255369 sc-eQTL 7.85e-01 -0.0194 0.0709 0.496 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -649907 sc-eQTL 9.25e-01 -0.01 0.106 0.492 B_Activated L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 6.26e-01 0.0462 0.0947 0.492 B_Activated L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 4.35e-01 0.0725 0.0928 0.492 B_Activated L2
ENSG00000112378 PERP 16183 sc-eQTL 4.40e-01 0.0373 0.0482 0.492 B_Activated L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 6.15e-01 -0.0472 0.0935 0.492 B_Activated L2
ENSG00000135597 REPS1 -864659 sc-eQTL 9.63e-01 0.00486 0.106 0.492 B_Activated L2
ENSG00000146386 ABRACL -905143 sc-eQTL 5.81e-01 -0.0529 0.0956 0.492 B_Activated L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 6.30e-01 0.0394 0.0817 0.492 B_Activated L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 3.15e-01 -0.0941 0.0935 0.494 B_Intermediate L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 8.48e-01 -0.0166 0.0866 0.494 B_Intermediate L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 4.35e-02 0.131 0.0643 0.494 B_Intermediate L2
ENSG00000112378 PERP 16183 sc-eQTL 1.72e-01 -0.113 0.0823 0.494 B_Intermediate L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 9.32e-01 -0.00551 0.0649 0.494 B_Intermediate L2
ENSG00000135597 REPS1 -864659 sc-eQTL 1.07e-01 0.141 0.0871 0.494 B_Intermediate L2
ENSG00000146386 ABRACL -905143 sc-eQTL 3.82e-01 -0.0652 0.0744 0.494 B_Intermediate L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 4.22e-02 -0.186 0.0911 0.494 B_Intermediate L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 3.27e-01 0.0955 0.0972 0.491 B_Memory L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 7.28e-01 0.0335 0.0961 0.491 B_Memory L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 3.75e-02 0.152 0.0725 0.491 B_Memory L2
ENSG00000112378 PERP 16183 sc-eQTL 8.23e-01 -0.0204 0.0913 0.491 B_Memory L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 6.11e-01 -0.032 0.0628 0.491 B_Memory L2
ENSG00000135597 REPS1 -864659 sc-eQTL 9.93e-01 -0.000763 0.0913 0.491 B_Memory L2
ENSG00000146386 ABRACL -905143 sc-eQTL 3.82e-02 -0.149 0.0714 0.491 B_Memory L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 2.56e-01 0.106 0.0933 0.491 B_Memory L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 1.51e-01 -0.128 0.0888 0.496 B_Naive1 L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 2.65e-01 0.0821 0.0735 0.496 B_Naive1 L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 1.05e-01 0.101 0.0623 0.496 B_Naive1 L2
ENSG00000112378 PERP 16183 sc-eQTL 6.51e-02 -0.156 0.0843 0.496 B_Naive1 L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 1.97e-01 -0.0636 0.0491 0.496 B_Naive1 L2
ENSG00000135597 REPS1 -864659 sc-eQTL 7.64e-01 0.0217 0.0719 0.496 B_Naive1 L2
ENSG00000146386 ABRACL -905143 sc-eQTL 8.39e-01 0.0103 0.0503 0.496 B_Naive1 L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 5.49e-01 -0.0463 0.0772 0.496 B_Naive1 L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 3.05e-01 -0.0894 0.0871 0.494 B_Naive2 L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 6.00e-01 -0.0472 0.0899 0.494 B_Naive2 L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 8.94e-02 0.101 0.0593 0.494 B_Naive2 L2
ENSG00000112378 PERP 16183 sc-eQTL 9.82e-01 -0.00163 0.0717 0.494 B_Naive2 L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 7.42e-01 -0.0237 0.0717 0.494 B_Naive2 L2
ENSG00000135597 REPS1 -864659 sc-eQTL 7.29e-01 -0.0272 0.0784 0.494 B_Naive2 L2
ENSG00000146386 ABRACL -905143 sc-eQTL 5.56e-01 -0.034 0.0577 0.494 B_Naive2 L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 8.38e-01 0.0189 0.0927 0.494 B_Naive2 L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 4.27e-01 0.0716 0.0899 0.493 CD4_CTL L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 2.01e-01 0.108 0.0839 0.493 CD4_CTL L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 6.72e-01 0.0329 0.0777 0.493 CD4_CTL L2
ENSG00000112378 PERP 16183 sc-eQTL 1.67e-01 0.131 0.0943 0.493 CD4_CTL L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 1.86e-01 0.0731 0.055 0.493 CD4_CTL L2
ENSG00000135597 REPS1 -864659 sc-eQTL 2.30e-01 -0.106 0.0879 0.493 CD4_CTL L2
ENSG00000146386 ABRACL -905143 sc-eQTL 7.47e-01 -0.026 0.0804 0.493 CD4_CTL L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 8.35e-01 0.018 0.086 0.493 CD4_CTL L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 3.80e-01 -0.0763 0.0868 0.496 CD4_Naive L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 6.55e-01 0.0205 0.0459 0.496 CD4_Naive L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 7.97e-02 0.0948 0.0538 0.496 CD4_Naive L2
ENSG00000112378 PERP 16183 sc-eQTL 5.66e-02 0.136 0.071 0.496 CD4_Naive L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 3.60e-01 0.046 0.0501 0.496 CD4_Naive L2
ENSG00000135597 REPS1 -864659 sc-eQTL 9.67e-01 -0.00247 0.0599 0.496 CD4_Naive L2
ENSG00000146386 ABRACL -905143 sc-eQTL 5.43e-01 0.0246 0.0403 0.496 CD4_Naive L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 5.29e-01 0.041 0.065 0.496 CD4_Naive L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 2.09e-01 -0.107 0.0851 0.496 CD4_TCM L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 4.78e-01 0.0457 0.0642 0.496 CD4_TCM L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 4.15e-02 0.129 0.0629 0.496 CD4_TCM L2
ENSG00000112378 PERP 16183 sc-eQTL 3.02e-03 0.234 0.0781 0.496 CD4_TCM L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 5.09e-01 0.0306 0.0463 0.496 CD4_TCM L2
ENSG00000135597 REPS1 -864659 sc-eQTL 1.13e-01 0.103 0.0644 0.496 CD4_TCM L2
ENSG00000146386 ABRACL -905143 sc-eQTL 6.23e-01 0.0245 0.0498 0.496 CD4_TCM L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 7.70e-01 -0.019 0.0649 0.496 CD4_TCM L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 1.12e-01 -0.151 0.0943 0.496 CD4_TEM L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 2.59e-01 0.0811 0.0716 0.496 CD4_TEM L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 4.68e-01 0.0469 0.0645 0.496 CD4_TEM L2
ENSG00000112378 PERP 16183 sc-eQTL 7.83e-01 -0.0208 0.0751 0.496 CD4_TEM L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 4.06e-01 -0.0397 0.0476 0.496 CD4_TEM L2
ENSG00000135597 REPS1 -864659 sc-eQTL 8.64e-01 0.0138 0.0804 0.496 CD4_TEM L2
ENSG00000146386 ABRACL -905143 sc-eQTL 7.66e-01 0.0171 0.0573 0.496 CD4_TEM L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 9.74e-01 -0.00252 0.0765 0.496 CD4_TEM L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 4.88e-01 -0.0671 0.0966 0.496 CD8_CTL L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 3.57e-01 -0.06 0.065 0.496 CD8_CTL L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 8.43e-02 0.119 0.0686 0.496 CD8_CTL L2
ENSG00000112378 PERP 16183 sc-eQTL 1.14e-01 0.136 0.0857 0.496 CD8_CTL L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 6.83e-01 0.0224 0.0548 0.496 CD8_CTL L2
ENSG00000135597 REPS1 -864659 sc-eQTL 2.92e-01 -0.0795 0.0752 0.496 CD8_CTL L2
ENSG00000146386 ABRACL -905143 sc-eQTL 5.25e-01 0.0388 0.0609 0.496 CD8_CTL L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 7.05e-01 -0.0292 0.0771 0.496 CD8_CTL L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 9.27e-01 -0.0084 0.0918 0.496 CD8_Naive L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 2.26e-01 0.0776 0.0638 0.496 CD8_Naive L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 7.29e-01 0.0204 0.0587 0.496 CD8_Naive L2
ENSG00000112378 PERP 16183 sc-eQTL 2.65e-01 0.0787 0.0704 0.496 CD8_Naive L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 8.15e-01 0.0117 0.0501 0.496 CD8_Naive L2
ENSG00000135597 REPS1 -864659 sc-eQTL 8.01e-01 -0.0179 0.0711 0.496 CD8_Naive L2
ENSG00000146386 ABRACL -905143 sc-eQTL 5.62e-01 -0.0216 0.0373 0.496 CD8_Naive L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 8.18e-01 -0.017 0.0741 0.496 CD8_Naive L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 7.78e-01 -0.0293 0.104 0.495 CD8_TCM L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 2.29e-01 -0.103 0.0853 0.495 CD8_TCM L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 3.97e-01 0.0617 0.0727 0.495 CD8_TCM L2
ENSG00000112378 PERP 16183 sc-eQTL 8.65e-01 0.0164 0.0962 0.495 CD8_TCM L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 2.70e-01 0.0512 0.0462 0.495 CD8_TCM L2
ENSG00000135597 REPS1 -864659 sc-eQTL 2.48e-01 -0.0911 0.0786 0.495 CD8_TCM L2
ENSG00000146386 ABRACL -905143 sc-eQTL 6.39e-02 0.145 0.0779 0.495 CD8_TCM L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 8.76e-01 -0.0133 0.0849 0.495 CD8_TCM L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 2.44e-01 0.113 0.0966 0.489 CD8_TEM L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 8.79e-01 -0.0128 0.0839 0.489 CD8_TEM L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 4.48e-01 0.0669 0.088 0.489 CD8_TEM L2
ENSG00000112378 PERP 16183 sc-eQTL 2.87e-01 0.107 0.1 0.489 CD8_TEM L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 9.48e-01 0.00405 0.0619 0.489 CD8_TEM L2
ENSG00000135597 REPS1 -864659 sc-eQTL 5.57e-01 -0.0554 0.0944 0.489 CD8_TEM L2
ENSG00000146386 ABRACL -905143 sc-eQTL 6.64e-01 -0.0317 0.0727 0.489 CD8_TEM L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 2.42e-01 0.107 0.0915 0.489 CD8_TEM L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 9.35e-01 0.00841 0.103 0.496 MAIT L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 1.48e-01 0.0963 0.0663 0.496 MAIT L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 1.53e-02 0.172 0.0703 0.496 MAIT L2
ENSG00000112378 PERP 16183 sc-eQTL 6.54e-01 -0.0423 0.0942 0.496 MAIT L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 6.75e-01 -0.0189 0.0448 0.496 MAIT L2
ENSG00000135597 REPS1 -864659 sc-eQTL 6.83e-01 0.0344 0.084 0.496 MAIT L2
ENSG00000146386 ABRACL -905143 sc-eQTL 5.74e-01 0.0348 0.0618 0.496 MAIT L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 2.11e-01 0.104 0.0826 0.496 MAIT L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 8.43e-03 -0.252 0.0946 0.491 NK_CD56bright L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 3.58e-01 -0.069 0.075 0.491 NK_CD56bright L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 7.90e-01 -0.0219 0.082 0.491 NK_CD56bright L2
ENSG00000112378 PERP 16183 sc-eQTL 6.26e-02 -0.163 0.087 0.491 NK_CD56bright L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 3.33e-01 0.0542 0.0558 0.491 NK_CD56bright L2
ENSG00000135597 REPS1 -864659 sc-eQTL 4.64e-01 0.0597 0.0813 0.491 NK_CD56bright L2
ENSG00000146386 ABRACL -905143 sc-eQTL 6.83e-01 -0.0307 0.075 0.491 NK_CD56bright L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 4.26e-01 -0.0709 0.089 0.491 NK_CD56bright L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 9.72e-01 0.00305 0.0854 0.496 NK_CD56dim L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 8.57e-01 0.0101 0.0561 0.496 NK_CD56dim L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 1.06e-01 0.122 0.0753 0.496 NK_CD56dim L2
ENSG00000112378 PERP 16183 sc-eQTL 2.05e-01 0.0861 0.0677 0.496 NK_CD56dim L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 7.32e-01 -0.0181 0.0528 0.496 NK_CD56dim L2
ENSG00000135597 REPS1 -864659 sc-eQTL 8.49e-01 -0.0133 0.0696 0.496 NK_CD56dim L2
ENSG00000146386 ABRACL -905143 sc-eQTL 3.35e-01 -0.0455 0.047 0.496 NK_CD56dim L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 3.48e-01 0.0742 0.079 0.496 NK_CD56dim L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 4.73e-01 0.0723 0.1 0.486 NK_HLA L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 6.28e-01 0.0359 0.0738 0.486 NK_HLA L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 1.74e-01 0.116 0.0852 0.486 NK_HLA L2
ENSG00000112378 PERP 16183 sc-eQTL 5.77e-01 0.0425 0.0761 0.486 NK_HLA L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 8.36e-01 -0.0121 0.0586 0.486 NK_HLA L2
ENSG00000135597 REPS1 -864659 sc-eQTL 6.41e-01 -0.0433 0.0927 0.486 NK_HLA L2
ENSG00000146386 ABRACL -905143 sc-eQTL 2.80e-01 -0.0825 0.0761 0.486 NK_HLA L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 5.94e-01 0.0503 0.0943 0.486 NK_HLA L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 9.44e-01 -0.00627 0.0896 0.496 NK_cytokine L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 7.89e-01 -0.0162 0.0604 0.496 NK_cytokine L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 3.94e-01 0.0658 0.077 0.496 NK_cytokine L2
ENSG00000112378 PERP 16183 sc-eQTL 6.37e-01 0.0339 0.0719 0.496 NK_cytokine L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 7.85e-01 -0.0147 0.0539 0.496 NK_cytokine L2
ENSG00000135597 REPS1 -864659 sc-eQTL 9.94e-01 0.000629 0.0797 0.496 NK_cytokine L2
ENSG00000146386 ABRACL -905143 sc-eQTL 7.82e-01 -0.0142 0.0513 0.496 NK_cytokine L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 8.67e-01 -0.0137 0.0813 0.496 NK_cytokine L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 5.63e-01 -0.0673 0.116 0.47 PB L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 4.95e-01 -0.0838 0.122 0.47 PB L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 4.01e-01 0.0867 0.103 0.47 PB L2
ENSG00000112378 PERP 16183 sc-eQTL 1.75e-01 0.106 0.078 0.47 PB L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 8.83e-01 0.0141 0.0954 0.47 PB L2
ENSG00000135597 REPS1 -864659 sc-eQTL 3.82e-01 -0.0982 0.112 0.47 PB L2
ENSG00000146386 ABRACL -905143 sc-eQTL 3.02e-01 -0.0811 0.0782 0.47 PB L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 9.14e-01 -0.0124 0.115 0.47 PB L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 9.02e-01 0.0121 0.0977 0.498 Pro_T L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 7.76e-01 0.0213 0.0745 0.498 Pro_T L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 5.99e-01 0.0409 0.0778 0.498 Pro_T L2
ENSG00000112378 PERP 16183 sc-eQTL 5.89e-01 -0.0389 0.0719 0.498 Pro_T L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 2.56e-01 -0.0515 0.0453 0.498 Pro_T L2
ENSG00000135597 REPS1 -864659 sc-eQTL 1.67e-01 0.125 0.0902 0.498 Pro_T L2
ENSG00000146386 ABRACL -905143 sc-eQTL 3.00e-01 -0.0606 0.0583 0.498 Pro_T L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 6.56e-01 0.0393 0.0881 0.498 Pro_T L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 1.04e-01 -0.15 0.0918 0.496 Treg L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 6.00e-01 0.0457 0.0869 0.496 Treg L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 1.57e-01 0.0892 0.0628 0.496 Treg L2
ENSG00000112378 PERP 16183 sc-eQTL 2.44e-01 0.116 0.099 0.496 Treg L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 4.05e-01 -0.046 0.0552 0.496 Treg L2
ENSG00000135597 REPS1 -864659 sc-eQTL 4.35e-01 -0.062 0.0793 0.496 Treg L2
ENSG00000146386 ABRACL -905143 sc-eQTL 9.32e-01 0.00581 0.0676 0.496 Treg L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 9.79e-01 0.00226 0.0843 0.496 Treg L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 2.37e-02 0.204 0.0896 0.485 cDC L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 9.57e-01 0.00404 0.074 0.485 cDC L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 9.11e-01 -0.00733 0.0652 0.485 cDC L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 9.33e-01 -0.00619 0.073 0.485 cDC L2
ENSG00000135540 NHSL1 -568969 sc-eQTL 1.23e-01 0.13 0.084 0.485 cDC L2
ENSG00000135597 REPS1 -864659 sc-eQTL 7.54e-01 0.0306 0.0975 0.485 cDC L2
ENSG00000146386 ABRACL -905143 sc-eQTL 3.64e-01 -0.0723 0.0796 0.485 cDC L2
ENSG00000225177 AL590617.2 -568946 sc-eQTL 3.78e-01 0.0824 0.0932 0.485 cDC L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 1.74e-01 0.129 0.0946 0.485 cDC L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 4.85e-01 -0.0497 0.071 0.496 cMono_IL1B L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 5.52e-01 0.0308 0.0518 0.496 cMono_IL1B L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 2.11e-01 0.0638 0.0509 0.496 cMono_IL1B L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 4.84e-01 -0.039 0.0557 0.496 cMono_IL1B L2
ENSG00000135540 NHSL1 -568969 sc-eQTL 3.22e-01 0.0847 0.0854 0.496 cMono_IL1B L2
ENSG00000135597 REPS1 -864659 sc-eQTL 7.01e-01 0.0293 0.0764 0.496 cMono_IL1B L2
ENSG00000146386 ABRACL -905143 sc-eQTL 3.95e-01 -0.0547 0.0642 0.496 cMono_IL1B L2
ENSG00000225177 AL590617.2 -568946 sc-eQTL 5.49e-01 0.0537 0.0895 0.496 cMono_IL1B L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 4.94e-01 -0.0408 0.0595 0.496 cMono_IL1B L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 2.94e-01 0.0858 0.0815 0.496 cMono_S100A L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 2.79e-01 0.0651 0.0599 0.496 cMono_S100A L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 1.37e-01 0.0832 0.0557 0.496 cMono_S100A L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 8.19e-01 -0.0122 0.0534 0.496 cMono_S100A L2
ENSG00000135540 NHSL1 -568969 sc-eQTL 2.84e-01 -0.0938 0.0873 0.496 cMono_S100A L2
ENSG00000135597 REPS1 -864659 sc-eQTL 3.34e-01 -0.0801 0.0827 0.496 cMono_S100A L2
ENSG00000146386 ABRACL -905143 sc-eQTL 2.82e-01 -0.0775 0.0718 0.496 cMono_S100A L2
ENSG00000225177 AL590617.2 -568946 sc-eQTL 4.59e-01 0.0711 0.0958 0.496 cMono_S100A L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 3.88e-01 -0.0661 0.0765 0.496 cMono_S100A L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 3.58e-01 0.104 0.112 0.503 gdT L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 2.96e-01 0.0943 0.0899 0.503 gdT L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 9.37e-01 -0.00857 0.107 0.503 gdT L2
ENSG00000112378 PERP 16183 sc-eQTL 8.53e-01 -0.0186 0.0998 0.503 gdT L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 3.81e-01 -0.0486 0.0554 0.503 gdT L2
ENSG00000135597 REPS1 -864659 sc-eQTL 5.60e-01 -0.0647 0.111 0.503 gdT L2
ENSG00000146386 ABRACL -905143 sc-eQTL 7.18e-02 -0.149 0.0824 0.503 gdT L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 4.05e-01 -0.0838 0.1 0.503 gdT L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 4.44e-02 -0.188 0.0932 0.489 intMono L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 1.37e-01 0.0941 0.063 0.489 intMono L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 7.90e-01 0.0169 0.0632 0.489 intMono L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 1.83e-01 -0.0727 0.0545 0.489 intMono L2
ENSG00000135540 NHSL1 -568969 sc-eQTL 1.97e-01 -0.11 0.0848 0.489 intMono L2
ENSG00000135597 REPS1 -864659 sc-eQTL 5.83e-01 -0.0483 0.0879 0.489 intMono L2
ENSG00000146386 ABRACL -905143 sc-eQTL 1.73e-02 -0.19 0.0792 0.489 intMono L2
ENSG00000225177 AL590617.2 -568946 sc-eQTL 9.25e-01 0.00898 0.0955 0.489 intMono L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 6.12e-01 -0.0414 0.0815 0.489 intMono L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 6.86e-01 -0.0357 0.0884 0.495 ncMono L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 4.53e-01 0.0565 0.0752 0.495 ncMono L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 9.35e-01 0.00431 0.0528 0.495 ncMono L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 9.55e-01 0.00376 0.0666 0.495 ncMono L2
ENSG00000135540 NHSL1 -568969 sc-eQTL 7.85e-01 0.0232 0.085 0.495 ncMono L2
ENSG00000135597 REPS1 -864659 sc-eQTL 1.41e-01 0.0942 0.0637 0.495 ncMono L2
ENSG00000146386 ABRACL -905143 sc-eQTL 6.65e-01 -0.0335 0.0771 0.495 ncMono L2
ENSG00000225177 AL590617.2 -568946 sc-eQTL 4.03e-02 0.193 0.0934 0.495 ncMono L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 5.95e-01 0.0444 0.0833 0.495 ncMono L2
ENSG00000024862 CCDC28A -649907 sc-eQTL 8.15e-01 -0.0245 0.105 0.494 pDC L2
ENSG00000027697 IFNGR1 904153 sc-eQTL 9.05e-01 0.0106 0.0887 0.494 pDC L2
ENSG00000051620 HEBP2 -279929 sc-eQTL 8.21e-01 0.0185 0.0813 0.494 pDC L2
ENSG00000118503 TNFAIP3 256388 sc-eQTL 3.20e-01 -0.0819 0.082 0.494 pDC L2
ENSG00000135540 NHSL1 -568969 sc-eQTL 9.63e-01 0.00374 0.081 0.494 pDC L2
ENSG00000135597 REPS1 -864659 sc-eQTL 8.69e-01 -0.0135 0.082 0.494 pDC L2
ENSG00000146386 ABRACL -905143 sc-eQTL 8.54e-01 0.0165 0.0896 0.494 pDC L2
ENSG00000225177 AL590617.2 -568946 sc-eQTL 9.85e-01 0.00156 0.0813 0.494 pDC L2
ENSG00000237499 WAKMAR2 255369 sc-eQTL 9.11e-01 -0.00932 0.0835 0.494 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -649907 sc-eQTL 6.63e-01 -0.0388 0.089 0.496 B_Memory LOneK1K
ENSG00000027697 IFNGR1 904153 sc-eQTL 6.80e-01 0.0314 0.076 0.496 B_Memory LOneK1K
ENSG00000051620 HEBP2 -279929 sc-eQTL 6.33e-02 0.114 0.0611 0.496 B_Memory LOneK1K
ENSG00000112378 PERP 16183 sc-eQTL 6.88e-01 -0.0327 0.0812 0.496 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 256388 sc-eQTL 3.50e-01 0.0501 0.0535 0.496 B_Memory LOneK1K
ENSG00000135597 REPS1 -864659 sc-eQTL 2.46e-01 0.0952 0.0819 0.496 B_Memory LOneK1K
ENSG00000146386 ABRACL -905143 sc-eQTL 3.57e-02 -0.119 0.0563 0.496 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 255369 sc-eQTL 4.92e-01 -0.0624 0.0906 0.496 B_Memory LOneK1K
ENSG00000024862 CCDC28A -649907 sc-eQTL 1.05e-01 -0.134 0.082 0.496 B_Naive LOneK1K
ENSG00000027697 IFNGR1 904153 sc-eQTL 5.46e-01 0.0466 0.077 0.496 B_Naive LOneK1K
ENSG00000051620 HEBP2 -279929 sc-eQTL 1.65e-01 0.0794 0.0569 0.496 B_Naive LOneK1K
ENSG00000112378 PERP 16183 sc-eQTL 1.05e-01 -0.136 0.0835 0.496 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 256388 sc-eQTL 4.89e-01 -0.0305 0.0441 0.496 B_Naive LOneK1K
ENSG00000135597 REPS1 -864659 sc-eQTL 6.55e-01 0.0294 0.0657 0.496 B_Naive LOneK1K
ENSG00000146386 ABRACL -905143 sc-eQTL 6.13e-01 0.0233 0.0461 0.496 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 255369 sc-eQTL 5.17e-01 -0.051 0.0785 0.496 B_Naive LOneK1K
ENSG00000024862 CCDC28A -649907 sc-eQTL 9.86e-01 0.00116 0.0654 0.496 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 904153 sc-eQTL 4.20e-01 0.042 0.052 0.496 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -279929 sc-eQTL 9.63e-02 0.0809 0.0484 0.496 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 256388 sc-eQTL 6.58e-01 -0.0213 0.0481 0.496 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -568969 sc-eQTL 7.84e-01 0.0235 0.0857 0.496 CD14_Mono LOneK1K
ENSG00000135597 REPS1 -864659 sc-eQTL 8.74e-01 0.0112 0.0705 0.496 CD14_Mono LOneK1K
ENSG00000146386 ABRACL -905143 sc-eQTL 3.52e-01 -0.0584 0.0626 0.496 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -568946 sc-eQTL 3.11e-01 0.0932 0.0918 0.496 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 255369 sc-eQTL 4.97e-01 -0.0392 0.0577 0.496 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A -649907 sc-eQTL 2.22e-01 -0.107 0.0874 0.496 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 904153 sc-eQTL 2.16e-01 0.0759 0.0611 0.496 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -279929 sc-eQTL 9.83e-01 -0.000978 0.0468 0.496 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 256388 sc-eQTL 5.47e-01 -0.0345 0.0573 0.496 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -568969 sc-eQTL 6.93e-01 -0.0329 0.0832 0.496 CD16_Mono LOneK1K
ENSG00000135597 REPS1 -864659 sc-eQTL 9.46e-01 0.0035 0.0518 0.496 CD16_Mono LOneK1K
ENSG00000146386 ABRACL -905143 sc-eQTL 5.75e-02 -0.144 0.0752 0.496 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -568946 sc-eQTL 2.83e-01 0.0987 0.0918 0.496 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 255369 sc-eQTL 7.92e-01 0.0203 0.0768 0.496 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A -649907 sc-eQTL 8.36e-01 0.0171 0.0824 0.496 NK_CD56dim LOneK1K
ENSG00000027697 IFNGR1 904153 sc-eQTL 6.54e-01 -0.0258 0.0576 0.496 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -279929 sc-eQTL 8.60e-02 0.122 0.0709 0.496 NK_CD56dim LOneK1K
ENSG00000112378 PERP 16183 sc-eQTL 8.34e-01 0.0126 0.0603 0.496 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 256388 sc-eQTL 9.59e-01 0.00272 0.0525 0.496 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 -864659 sc-eQTL 5.97e-01 -0.0363 0.0686 0.496 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL -905143 sc-eQTL 3.87e-01 -0.0383 0.0442 0.496 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 255369 sc-eQTL 6.81e-01 0.0302 0.0734 0.496 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112378 PERP 16183 eQTL 0.0011 0.0828 0.0253 0.00618 0.00364 0.473
ENSG00000135597 REPS1 -864659 eQTL 0.00584 0.044 0.0159 0.0016 0.0 0.473

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 \N 904153 2.66e-07 1.01e-07 4.69e-08 1.78e-07 8.92e-08 9.57e-08 1.41e-07 5.49e-08 1.41e-07 4.38e-08 1.63e-07 8.03e-08 1.26e-07 6.21e-08 5.99e-08 7.5e-08 4.63e-08 1.14e-07 5.36e-08 4e-08 1.04e-07 1.28e-07 1.3e-07 4.13e-08 1.31e-07 1.19e-07 1.11e-07 9.15e-08 1.02e-07 1.09e-07 9.58e-08 4.09e-08 3.61e-08 8.65e-08 8.99e-08 3.95e-08 4.62e-08 9.26e-08 6.78e-08 3.8e-08 4.41e-08 1.36e-07 5.08e-08 1.1e-08 4.7e-08 1.69e-08 1.25e-07 3.83e-09 4.79e-08
ENSG00000112378 PERP 16183 3.44e-05 3.22e-05 6.12e-06 1.54e-05 5.65e-06 1.38e-05 4.36e-05 4.46e-06 3.01e-05 1.52e-05 3.73e-05 1.67e-05 4.7e-05 1.35e-05 6.84e-06 1.86e-05 1.61e-05 2.42e-05 7.51e-06 6.6e-06 1.43e-05 3.13e-05 3.09e-05 8.57e-06 4.24e-05 7.7e-06 1.41e-05 1.26e-05 3.14e-05 2.4e-05 1.96e-05 1.61e-06 2.56e-06 6.84e-06 1.14e-05 5.68e-06 3.09e-06 3.18e-06 4.54e-06 3.3e-06 1.73e-06 3.71e-05 3.5e-06 3.62e-07 2.34e-06 3.75e-06 4.09e-06 1.58e-06 1.51e-06