logo

Genes within 1Mb (chr6:138115011:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -658498 sc-eQTL 2.83e-01 -0.0812 0.0754 0.5 B L1
ENSG00000027697 IFNGR1 895562 sc-eQTL 3.87e-01 0.0636 0.0734 0.5 B L1
ENSG00000051620 HEBP2 -288520 sc-eQTL 8.04e-02 0.101 0.0573 0.5 B L1
ENSG00000112378 PERP 7592 sc-eQTL 3.02e-01 -0.0594 0.0574 0.5 B L1
ENSG00000118503 TNFAIP3 247797 sc-eQTL 9.24e-01 -0.00441 0.0464 0.5 B L1
ENSG00000135597 REPS1 -873250 sc-eQTL 3.52e-01 0.0605 0.0648 0.5 B L1
ENSG00000146386 ABRACL -913734 sc-eQTL 6.27e-01 -0.0185 0.0381 0.5 B L1
ENSG00000237499 WAKMAR2 246778 sc-eQTL 6.04e-01 -0.0379 0.073 0.5 B L1
ENSG00000024862 CCDC28A -658498 sc-eQTL 3.36e-01 -0.0806 0.0836 0.5 CD4T L1
ENSG00000027697 IFNGR1 895562 sc-eQTL 5.21e-01 0.0315 0.049 0.5 CD4T L1
ENSG00000051620 HEBP2 -288520 sc-eQTL 4.48e-02 0.113 0.0557 0.5 CD4T L1
ENSG00000112378 PERP 7592 sc-eQTL 5.49e-03 0.146 0.0521 0.5 CD4T L1
ENSG00000118503 TNFAIP3 247797 sc-eQTL 4.46e-01 0.0379 0.0496 0.5 CD4T L1
ENSG00000135597 REPS1 -873250 sc-eQTL 5.79e-01 0.0305 0.0549 0.5 CD4T L1
ENSG00000146386 ABRACL -913734 sc-eQTL 6.75e-01 0.0169 0.0403 0.5 CD4T L1
ENSG00000237499 WAKMAR2 246778 sc-eQTL 9.77e-01 0.0018 0.0626 0.5 CD4T L1
ENSG00000024862 CCDC28A -658498 sc-eQTL 7.08e-01 0.0343 0.0913 0.5 CD8T L1
ENSG00000027697 IFNGR1 895562 sc-eQTL 6.79e-01 -0.0232 0.0558 0.5 CD8T L1
ENSG00000051620 HEBP2 -288520 sc-eQTL 6.43e-02 0.11 0.0593 0.5 CD8T L1
ENSG00000112378 PERP 7592 sc-eQTL 1.50e-01 0.0875 0.0606 0.5 CD8T L1
ENSG00000118503 TNFAIP3 247797 sc-eQTL 6.74e-01 0.0198 0.047 0.5 CD8T L1
ENSG00000135597 REPS1 -873250 sc-eQTL 6.38e-01 -0.029 0.0615 0.5 CD8T L1
ENSG00000146386 ABRACL -913734 sc-eQTL 8.84e-01 -0.0051 0.035 0.5 CD8T L1
ENSG00000237499 WAKMAR2 246778 sc-eQTL 7.54e-01 0.0217 0.069 0.5 CD8T L1
ENSG00000024862 CCDC28A -658498 sc-eQTL 2.25e-01 0.112 0.0925 0.498 DC L1
ENSG00000027697 IFNGR1 895562 sc-eQTL 4.66e-01 0.0503 0.0688 0.498 DC L1
ENSG00000051620 HEBP2 -288520 sc-eQTL 9.48e-01 0.00425 0.0653 0.498 DC L1
ENSG00000118503 TNFAIP3 247797 sc-eQTL 9.38e-01 -0.00572 0.0736 0.498 DC L1
ENSG00000135540 NHSL1 -577560 sc-eQTL 2.61e-01 0.0956 0.0849 0.498 DC L1
ENSG00000135597 REPS1 -873250 sc-eQTL 9.00e-01 -0.00943 0.0753 0.498 DC L1
ENSG00000146386 ABRACL -913734 sc-eQTL 6.20e-01 -0.0366 0.0737 0.498 DC L1
ENSG00000225177 AL590617.2 -577537 sc-eQTL 4.17e-01 0.0723 0.0888 0.498 DC L1
ENSG00000237499 WAKMAR2 246778 sc-eQTL 9.98e-01 -0.000175 0.075 0.498 DC L1
ENSG00000024862 CCDC28A -658498 sc-eQTL 2.64e-01 -0.0739 0.0659 0.5 Mono L1
ENSG00000027697 IFNGR1 895562 sc-eQTL 2.17e-01 0.0695 0.0562 0.5 Mono L1
ENSG00000051620 HEBP2 -288520 sc-eQTL 1.50e-01 0.0658 0.0455 0.5 Mono L1
ENSG00000118503 TNFAIP3 247797 sc-eQTL 7.51e-01 -0.0152 0.0478 0.5 Mono L1
ENSG00000135540 NHSL1 -577560 sc-eQTL 7.97e-01 0.0222 0.0864 0.5 Mono L1
ENSG00000135597 REPS1 -873250 sc-eQTL 9.85e-01 -0.000923 0.0506 0.5 Mono L1
ENSG00000146386 ABRACL -913734 sc-eQTL 2.29e-01 -0.0791 0.0656 0.5 Mono L1
ENSG00000225177 AL590617.2 -577537 sc-eQTL 2.96e-01 0.0939 0.0896 0.5 Mono L1
ENSG00000237499 WAKMAR2 246778 sc-eQTL 5.98e-01 -0.0312 0.0592 0.5 Mono L1
ENSG00000024862 CCDC28A -658498 sc-eQTL 7.19e-01 -0.0291 0.0805 0.5 NK L1
ENSG00000027697 IFNGR1 895562 sc-eQTL 4.20e-01 -0.0499 0.0618 0.5 NK L1
ENSG00000051620 HEBP2 -288520 sc-eQTL 2.37e-01 0.084 0.0707 0.5 NK L1
ENSG00000112378 PERP 7592 sc-eQTL 9.69e-01 -0.00231 0.0602 0.5 NK L1
ENSG00000118503 TNFAIP3 247797 sc-eQTL 9.65e-01 0.00229 0.0515 0.5 NK L1
ENSG00000135597 REPS1 -873250 sc-eQTL 8.80e-01 -0.01 0.0663 0.5 NK L1
ENSG00000146386 ABRACL -913734 sc-eQTL 3.71e-01 -0.0433 0.0483 0.5 NK L1
ENSG00000237499 WAKMAR2 246778 sc-eQTL 8.60e-01 0.0129 0.0731 0.5 NK L1
ENSG00000024862 CCDC28A -658498 sc-eQTL 8.68e-01 0.0159 0.0952 0.5 Other_T L1
ENSG00000027697 IFNGR1 895562 sc-eQTL 4.95e-01 0.0395 0.0579 0.5 Other_T L1
ENSG00000051620 HEBP2 -288520 sc-eQTL 1.29e-01 0.0932 0.0611 0.5 Other_T L1
ENSG00000112378 PERP 7592 sc-eQTL 3.01e-01 -0.0785 0.0756 0.5 Other_T L1
ENSG00000118503 TNFAIP3 247797 sc-eQTL 7.90e-01 -0.00961 0.0361 0.5 Other_T L1
ENSG00000135597 REPS1 -873250 sc-eQTL 2.61e-01 0.0833 0.0739 0.5 Other_T L1
ENSG00000146386 ABRACL -913734 sc-eQTL 5.34e-02 -0.0934 0.0481 0.5 Other_T L1
ENSG00000237499 WAKMAR2 246778 sc-eQTL 6.96e-01 -0.028 0.0716 0.5 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -658498 sc-eQTL 9.44e-01 0.00757 0.107 0.495 B_Activated L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 5.90e-01 0.0514 0.0953 0.495 B_Activated L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 5.22e-01 0.0599 0.0934 0.495 B_Activated L2
ENSG00000112378 PERP 7592 sc-eQTL 4.41e-01 0.0374 0.0485 0.495 B_Activated L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 5.35e-01 -0.0585 0.0941 0.495 B_Activated L2
ENSG00000135597 REPS1 -873250 sc-eQTL 9.01e-01 -0.0132 0.106 0.495 B_Activated L2
ENSG00000146386 ABRACL -913734 sc-eQTL 5.84e-01 -0.0528 0.0962 0.495 B_Activated L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 6.82e-01 0.0338 0.0822 0.495 B_Activated L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 3.36e-01 -0.0913 0.0947 0.498 B_Intermediate L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 9.30e-01 -0.00768 0.0877 0.498 B_Intermediate L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 3.63e-02 0.137 0.0651 0.498 B_Intermediate L2
ENSG00000112378 PERP 7592 sc-eQTL 1.23e-01 -0.129 0.0832 0.498 B_Intermediate L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 9.97e-01 0.000254 0.0657 0.498 B_Intermediate L2
ENSG00000135597 REPS1 -873250 sc-eQTL 1.22e-01 0.137 0.0882 0.498 B_Intermediate L2
ENSG00000146386 ABRACL -913734 sc-eQTL 3.27e-01 -0.0739 0.0753 0.498 B_Intermediate L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 2.65e-02 -0.206 0.0921 0.498 B_Intermediate L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 4.31e-01 0.0775 0.0983 0.496 B_Memory L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 7.03e-01 0.0371 0.0971 0.496 B_Memory L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 1.60e-02 0.177 0.073 0.496 B_Memory L2
ENSG00000112378 PERP 7592 sc-eQTL 7.59e-01 -0.0283 0.0923 0.496 B_Memory L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 5.65e-01 -0.0366 0.0635 0.496 B_Memory L2
ENSG00000135597 REPS1 -873250 sc-eQTL 9.10e-01 -0.0104 0.0923 0.496 B_Memory L2
ENSG00000146386 ABRACL -913734 sc-eQTL 2.36e-02 -0.164 0.0721 0.496 B_Memory L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 1.96e-01 0.122 0.0942 0.496 B_Memory L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 1.84e-01 -0.12 0.0902 0.5 B_Naive1 L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 3.05e-01 0.0768 0.0747 0.5 B_Naive1 L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 1.00e-01 0.105 0.0633 0.5 B_Naive1 L2
ENSG00000112378 PERP 7592 sc-eQTL 5.05e-02 -0.168 0.0856 0.5 B_Naive1 L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 2.08e-01 -0.0631 0.0499 0.5 B_Naive1 L2
ENSG00000135597 REPS1 -873250 sc-eQTL 9.15e-01 0.00781 0.0731 0.5 B_Naive1 L2
ENSG00000146386 ABRACL -913734 sc-eQTL 7.28e-01 0.0178 0.0511 0.5 B_Naive1 L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 6.08e-01 -0.0403 0.0784 0.5 B_Naive1 L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 2.53e-01 -0.101 0.0883 0.498 B_Naive2 L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 6.06e-01 -0.0471 0.0912 0.498 B_Naive2 L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 4.61e-02 0.12 0.06 0.498 B_Naive2 L2
ENSG00000112378 PERP 7592 sc-eQTL 8.73e-01 -0.0116 0.0727 0.498 B_Naive2 L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 8.53e-01 -0.0135 0.0727 0.498 B_Naive2 L2
ENSG00000135597 REPS1 -873250 sc-eQTL 9.25e-01 -0.00753 0.0795 0.498 B_Naive2 L2
ENSG00000146386 ABRACL -913734 sc-eQTL 5.39e-01 -0.036 0.0585 0.498 B_Naive2 L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 8.27e-01 0.0205 0.094 0.498 B_Naive2 L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 4.30e-01 0.0719 0.091 0.498 CD4_CTL L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 1.75e-01 0.116 0.085 0.498 CD4_CTL L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 7.35e-01 0.0267 0.0787 0.498 CD4_CTL L2
ENSG00000112378 PERP 7592 sc-eQTL 2.00e-01 0.123 0.0955 0.498 CD4_CTL L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 1.54e-01 0.0797 0.0557 0.498 CD4_CTL L2
ENSG00000135597 REPS1 -873250 sc-eQTL 3.15e-01 -0.0898 0.0891 0.498 CD4_CTL L2
ENSG00000146386 ABRACL -913734 sc-eQTL 7.89e-01 -0.0219 0.0814 0.498 CD4_CTL L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 8.32e-01 -0.0186 0.0871 0.498 CD4_CTL L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 3.89e-01 -0.0759 0.088 0.5 CD4_Naive L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 7.70e-01 0.0136 0.0466 0.5 CD4_Naive L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 4.67e-02 0.109 0.0544 0.5 CD4_Naive L2
ENSG00000112378 PERP 7592 sc-eQTL 4.18e-02 0.147 0.0719 0.5 CD4_Naive L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 4.03e-01 0.0426 0.0508 0.5 CD4_Naive L2
ENSG00000135597 REPS1 -873250 sc-eQTL 9.74e-01 -0.00199 0.0607 0.5 CD4_Naive L2
ENSG00000146386 ABRACL -913734 sc-eQTL 5.87e-01 0.0222 0.0409 0.5 CD4_Naive L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 6.62e-01 0.0288 0.0659 0.5 CD4_Naive L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 2.20e-01 -0.106 0.0865 0.5 CD4_TCM L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 5.60e-01 0.0381 0.0652 0.5 CD4_TCM L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 2.69e-02 0.142 0.0638 0.5 CD4_TCM L2
ENSG00000112378 PERP 7592 sc-eQTL 3.26e-03 0.236 0.0794 0.5 CD4_TCM L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 5.44e-01 0.0286 0.047 0.5 CD4_TCM L2
ENSG00000135597 REPS1 -873250 sc-eQTL 1.08e-01 0.106 0.0654 0.5 CD4_TCM L2
ENSG00000146386 ABRACL -913734 sc-eQTL 8.52e-01 0.00942 0.0506 0.5 CD4_TCM L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 7.31e-01 -0.0227 0.0659 0.5 CD4_TCM L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 1.18e-01 -0.15 0.0954 0.5 CD4_TEM L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 3.09e-01 0.074 0.0725 0.5 CD4_TEM L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 4.11e-01 0.0538 0.0653 0.5 CD4_TEM L2
ENSG00000112378 PERP 7592 sc-eQTL 7.02e-01 -0.0291 0.076 0.5 CD4_TEM L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 4.23e-01 -0.0387 0.0482 0.5 CD4_TEM L2
ENSG00000135597 REPS1 -873250 sc-eQTL 8.83e-01 0.012 0.0814 0.5 CD4_TEM L2
ENSG00000146386 ABRACL -913734 sc-eQTL 8.68e-01 0.00968 0.058 0.5 CD4_TEM L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 8.78e-01 -0.0119 0.0774 0.5 CD4_TEM L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 3.85e-01 -0.0852 0.0978 0.5 CD8_CTL L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 3.21e-01 -0.0656 0.0659 0.5 CD8_CTL L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 9.16e-02 0.118 0.0695 0.5 CD8_CTL L2
ENSG00000112378 PERP 7592 sc-eQTL 1.40e-01 0.129 0.0869 0.5 CD8_CTL L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 7.32e-01 0.019 0.0556 0.5 CD8_CTL L2
ENSG00000135597 REPS1 -873250 sc-eQTL 3.39e-01 -0.073 0.0763 0.5 CD8_CTL L2
ENSG00000146386 ABRACL -913734 sc-eQTL 5.56e-01 0.0364 0.0618 0.5 CD8_CTL L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 5.67e-01 -0.0447 0.0781 0.5 CD8_CTL L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 9.52e-01 0.00559 0.0931 0.5 CD8_Naive L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 2.22e-01 0.0793 0.0647 0.5 CD8_Naive L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 6.96e-01 0.0232 0.0595 0.5 CD8_Naive L2
ENSG00000112378 PERP 7592 sc-eQTL 2.01e-01 0.0913 0.0712 0.5 CD8_Naive L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 7.85e-01 0.0139 0.0508 0.5 CD8_Naive L2
ENSG00000135597 REPS1 -873250 sc-eQTL 9.25e-01 -0.00678 0.072 0.5 CD8_Naive L2
ENSG00000146386 ABRACL -913734 sc-eQTL 4.43e-01 -0.029 0.0377 0.5 CD8_Naive L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 7.52e-01 -0.0238 0.075 0.5 CD8_Naive L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 6.99e-01 -0.0407 0.105 0.5 CD8_TCM L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 2.46e-01 -0.101 0.0866 0.5 CD8_TCM L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 3.17e-01 0.074 0.0738 0.5 CD8_TCM L2
ENSG00000112378 PERP 7592 sc-eQTL 8.04e-01 0.0243 0.0977 0.5 CD8_TCM L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 3.22e-01 0.0466 0.047 0.5 CD8_TCM L2
ENSG00000135597 REPS1 -873250 sc-eQTL 3.22e-01 -0.0793 0.0798 0.5 CD8_TCM L2
ENSG00000146386 ABRACL -913734 sc-eQTL 8.72e-02 0.136 0.0791 0.5 CD8_TCM L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 7.50e-01 -0.0275 0.0861 0.5 CD8_TCM L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 2.26e-01 0.119 0.0979 0.493 CD8_TEM L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 7.96e-01 -0.022 0.0851 0.493 CD8_TEM L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 3.72e-01 0.0798 0.0892 0.493 CD8_TEM L2
ENSG00000112378 PERP 7592 sc-eQTL 4.20e-01 0.0823 0.102 0.493 CD8_TEM L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 8.37e-01 0.0129 0.0628 0.493 CD8_TEM L2
ENSG00000135597 REPS1 -873250 sc-eQTL 6.26e-01 -0.0467 0.0957 0.493 CD8_TEM L2
ENSG00000146386 ABRACL -913734 sc-eQTL 6.86e-01 -0.0298 0.0738 0.493 CD8_TEM L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 2.13e-01 0.116 0.0928 0.493 CD8_TEM L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 9.92e-01 -0.00102 0.104 0.5 MAIT L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 1.99e-01 0.0867 0.0673 0.5 MAIT L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 1.15e-02 0.181 0.0711 0.5 MAIT L2
ENSG00000112378 PERP 7592 sc-eQTL 6.28e-01 -0.0464 0.0955 0.5 MAIT L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 6.08e-01 -0.0233 0.0454 0.5 MAIT L2
ENSG00000135597 REPS1 -873250 sc-eQTL 7.22e-01 0.0304 0.0852 0.5 MAIT L2
ENSG00000146386 ABRACL -913734 sc-eQTL 6.55e-01 0.0281 0.0626 0.5 MAIT L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 2.48e-01 0.097 0.0838 0.5 MAIT L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 8.85e-03 -0.253 0.0958 0.496 NK_CD56bright L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 2.74e-01 -0.0833 0.0758 0.496 NK_CD56bright L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 7.96e-01 -0.0215 0.083 0.496 NK_CD56bright L2
ENSG00000112378 PERP 7592 sc-eQTL 5.52e-02 -0.17 0.088 0.496 NK_CD56bright L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 3.30e-01 0.0551 0.0565 0.496 NK_CD56bright L2
ENSG00000135597 REPS1 -873250 sc-eQTL 3.35e-01 0.0794 0.0822 0.496 NK_CD56bright L2
ENSG00000146386 ABRACL -913734 sc-eQTL 6.43e-01 -0.0353 0.0759 0.496 NK_CD56bright L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 4.08e-01 -0.0748 0.0901 0.496 NK_CD56bright L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 8.14e-01 0.0204 0.0864 0.5 NK_CD56dim L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 9.59e-01 0.00289 0.0568 0.5 NK_CD56dim L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 9.99e-02 0.126 0.0762 0.5 NK_CD56dim L2
ENSG00000112378 PERP 7592 sc-eQTL 1.92e-01 0.0898 0.0685 0.5 NK_CD56dim L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 6.65e-01 -0.0232 0.0535 0.5 NK_CD56dim L2
ENSG00000135597 REPS1 -873250 sc-eQTL 6.53e-01 -0.0317 0.0705 0.5 NK_CD56dim L2
ENSG00000146386 ABRACL -913734 sc-eQTL 1.86e-01 -0.063 0.0475 0.5 NK_CD56dim L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 4.86e-01 0.0558 0.08 0.5 NK_CD56dim L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 2.91e-01 0.108 0.102 0.491 NK_HLA L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 7.74e-01 0.0215 0.075 0.491 NK_HLA L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 2.14e-01 0.108 0.0866 0.491 NK_HLA L2
ENSG00000112378 PERP 7592 sc-eQTL 6.35e-01 0.0367 0.0773 0.491 NK_HLA L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 5.98e-01 -0.0314 0.0594 0.491 NK_HLA L2
ENSG00000135597 REPS1 -873250 sc-eQTL 8.87e-01 -0.0134 0.0942 0.491 NK_HLA L2
ENSG00000146386 ABRACL -913734 sc-eQTL 2.05e-01 -0.0981 0.0772 0.491 NK_HLA L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 4.53e-01 0.0719 0.0957 0.491 NK_HLA L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 9.72e-01 0.00317 0.0907 0.5 NK_cytokine L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 6.53e-01 -0.0275 0.0611 0.5 NK_cytokine L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 3.26e-01 0.0768 0.078 0.5 NK_cytokine L2
ENSG00000112378 PERP 7592 sc-eQTL 5.46e-01 0.044 0.0728 0.5 NK_cytokine L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 7.03e-01 -0.0209 0.0546 0.5 NK_cytokine L2
ENSG00000135597 REPS1 -873250 sc-eQTL 8.58e-01 0.0144 0.0807 0.5 NK_cytokine L2
ENSG00000146386 ABRACL -913734 sc-eQTL 5.35e-01 -0.0323 0.0519 0.5 NK_cytokine L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 6.87e-01 -0.0332 0.0822 0.5 NK_cytokine L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 5.63e-01 -0.0673 0.116 0.47 PB L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 4.95e-01 -0.0838 0.122 0.47 PB L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 4.01e-01 0.0867 0.103 0.47 PB L2
ENSG00000112378 PERP 7592 sc-eQTL 1.75e-01 0.106 0.078 0.47 PB L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 8.83e-01 0.0141 0.0954 0.47 PB L2
ENSG00000135597 REPS1 -873250 sc-eQTL 3.82e-01 -0.0982 0.112 0.47 PB L2
ENSG00000146386 ABRACL -913734 sc-eQTL 3.02e-01 -0.0811 0.0782 0.47 PB L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 9.14e-01 -0.0124 0.115 0.47 PB L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 7.92e-01 0.026 0.0983 0.502 Pro_T L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 8.00e-01 0.0191 0.075 0.502 Pro_T L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 5.27e-01 0.0497 0.0783 0.502 Pro_T L2
ENSG00000112378 PERP 7592 sc-eQTL 5.69e-01 -0.0413 0.0724 0.502 Pro_T L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 2.74e-01 -0.05 0.0456 0.502 Pro_T L2
ENSG00000135597 REPS1 -873250 sc-eQTL 1.12e-01 0.145 0.0907 0.502 Pro_T L2
ENSG00000146386 ABRACL -913734 sc-eQTL 3.44e-01 -0.0557 0.0587 0.502 Pro_T L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 6.76e-01 0.0371 0.0886 0.502 Pro_T L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 8.82e-02 -0.159 0.0929 0.5 Treg L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 6.09e-01 0.0451 0.088 0.5 Treg L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 1.22e-01 0.0988 0.0636 0.5 Treg L2
ENSG00000112378 PERP 7592 sc-eQTL 2.18e-01 0.124 0.1 0.5 Treg L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 4.75e-01 -0.04 0.0559 0.5 Treg L2
ENSG00000135597 REPS1 -873250 sc-eQTL 4.10e-01 -0.0663 0.0803 0.5 Treg L2
ENSG00000146386 ABRACL -913734 sc-eQTL 9.13e-01 -0.00746 0.0685 0.5 Treg L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 9.52e-01 -0.0051 0.0854 0.5 Treg L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 1.72e-02 0.218 0.0908 0.49 cDC L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 8.56e-01 0.0136 0.0751 0.49 cDC L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 8.69e-01 0.0109 0.0661 0.49 cDC L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 8.67e-01 -0.0124 0.0741 0.49 cDC L2
ENSG00000135540 NHSL1 -577560 sc-eQTL 1.72e-01 0.117 0.0854 0.49 cDC L2
ENSG00000135597 REPS1 -873250 sc-eQTL 8.30e-01 0.0212 0.0989 0.49 cDC L2
ENSG00000146386 ABRACL -913734 sc-eQTL 3.11e-01 -0.0819 0.0807 0.49 cDC L2
ENSG00000225177 AL590617.2 -577537 sc-eQTL 4.81e-01 0.0668 0.0946 0.49 cDC L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 1.79e-01 0.13 0.096 0.49 cDC L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 4.47e-01 -0.0547 0.0718 0.5 cMono_IL1B L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 5.28e-01 0.0331 0.0524 0.5 cMono_IL1B L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 1.24e-01 0.0793 0.0514 0.5 cMono_IL1B L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 3.28e-01 -0.0552 0.0563 0.5 cMono_IL1B L2
ENSG00000135540 NHSL1 -577560 sc-eQTL 3.64e-01 0.0786 0.0864 0.5 cMono_IL1B L2
ENSG00000135597 REPS1 -873250 sc-eQTL 5.53e-01 0.0459 0.0772 0.5 cMono_IL1B L2
ENSG00000146386 ABRACL -913734 sc-eQTL 2.62e-01 -0.0728 0.0648 0.5 cMono_IL1B L2
ENSG00000225177 AL590617.2 -577537 sc-eQTL 6.07e-01 0.0467 0.0906 0.5 cMono_IL1B L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 4.10e-01 -0.0497 0.0602 0.5 cMono_IL1B L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 3.35e-01 0.0798 0.0825 0.5 cMono_S100A L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 2.54e-01 0.0693 0.0606 0.5 cMono_S100A L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 8.71e-02 0.0966 0.0562 0.5 cMono_S100A L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 5.06e-01 -0.0359 0.054 0.5 cMono_S100A L2
ENSG00000135540 NHSL1 -577560 sc-eQTL 3.86e-01 -0.0769 0.0885 0.5 cMono_S100A L2
ENSG00000135597 REPS1 -873250 sc-eQTL 2.87e-01 -0.0892 0.0836 0.5 cMono_S100A L2
ENSG00000146386 ABRACL -913734 sc-eQTL 2.10e-01 -0.0914 0.0726 0.5 cMono_S100A L2
ENSG00000225177 AL590617.2 -577537 sc-eQTL 4.74e-01 0.0696 0.097 0.5 cMono_S100A L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 2.23e-01 -0.0944 0.0773 0.5 cMono_S100A L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 2.25e-01 0.14 0.115 0.509 gdT L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 2.88e-01 0.0979 0.0918 0.509 gdT L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 7.80e-01 -0.0307 0.11 0.509 gdT L2
ENSG00000112378 PERP 7592 sc-eQTL 8.17e-01 -0.0236 0.102 0.509 gdT L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 4.32e-01 -0.0446 0.0566 0.509 gdT L2
ENSG00000135597 REPS1 -873250 sc-eQTL 6.22e-01 -0.0558 0.113 0.509 gdT L2
ENSG00000146386 ABRACL -913734 sc-eQTL 1.16e-01 -0.133 0.0844 0.509 gdT L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 2.92e-01 -0.108 0.102 0.509 gdT L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 4.23e-02 -0.192 0.0941 0.493 intMono L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 8.86e-02 0.109 0.0636 0.493 intMono L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 8.27e-01 0.014 0.0638 0.493 intMono L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 1.45e-01 -0.0805 0.055 0.493 intMono L2
ENSG00000135540 NHSL1 -577560 sc-eQTL 3.28e-01 -0.0841 0.0859 0.493 intMono L2
ENSG00000135597 REPS1 -873250 sc-eQTL 5.02e-01 -0.0597 0.0888 0.493 intMono L2
ENSG00000146386 ABRACL -913734 sc-eQTL 1.45e-02 -0.197 0.0799 0.493 intMono L2
ENSG00000225177 AL590617.2 -577537 sc-eQTL 8.27e-01 0.0212 0.0965 0.493 intMono L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 4.64e-01 -0.0604 0.0823 0.493 intMono L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 7.76e-01 -0.0256 0.0896 0.5 ncMono L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 4.53e-01 0.0573 0.0762 0.5 ncMono L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 6.32e-01 0.0256 0.0534 0.5 ncMono L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 9.51e-01 0.00412 0.0675 0.5 ncMono L2
ENSG00000135540 NHSL1 -577560 sc-eQTL 7.00e-01 0.0333 0.0861 0.5 ncMono L2
ENSG00000135597 REPS1 -873250 sc-eQTL 1.65e-01 0.0899 0.0646 0.5 ncMono L2
ENSG00000146386 ABRACL -913734 sc-eQTL 4.97e-01 -0.0532 0.0781 0.5 ncMono L2
ENSG00000225177 AL590617.2 -577537 sc-eQTL 2.85e-02 0.208 0.0945 0.5 ncMono L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 5.32e-01 0.0528 0.0844 0.5 ncMono L2
ENSG00000024862 CCDC28A -658498 sc-eQTL 7.75e-01 -0.0302 0.105 0.497 pDC L2
ENSG00000027697 IFNGR1 895562 sc-eQTL 9.52e-01 0.00535 0.0895 0.497 pDC L2
ENSG00000051620 HEBP2 -288520 sc-eQTL 8.36e-01 0.0171 0.082 0.497 pDC L2
ENSG00000118503 TNFAIP3 247797 sc-eQTL 3.17e-01 -0.0831 0.0827 0.497 pDC L2
ENSG00000135540 NHSL1 -577560 sc-eQTL 9.78e-01 -0.00227 0.0817 0.497 pDC L2
ENSG00000135597 REPS1 -873250 sc-eQTL 9.41e-01 0.00611 0.0827 0.497 pDC L2
ENSG00000146386 ABRACL -913734 sc-eQTL 8.73e-01 0.0145 0.0904 0.497 pDC L2
ENSG00000225177 AL590617.2 -577537 sc-eQTL 7.88e-01 0.0221 0.082 0.497 pDC L2
ENSG00000237499 WAKMAR2 246778 sc-eQTL 9.01e-01 -0.0105 0.0842 0.497 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -658498 sc-eQTL 6.81e-01 -0.037 0.09 0.5 B_Memory LOneK1K
ENSG00000027697 IFNGR1 895562 sc-eQTL 6.78e-01 0.0319 0.0768 0.5 B_Memory LOneK1K
ENSG00000051620 HEBP2 -288520 sc-eQTL 4.27e-02 0.126 0.0617 0.5 B_Memory LOneK1K
ENSG00000112378 PERP 7592 sc-eQTL 6.23e-01 -0.0404 0.0821 0.5 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 247797 sc-eQTL 3.47e-01 0.051 0.0541 0.5 B_Memory LOneK1K
ENSG00000135597 REPS1 -873250 sc-eQTL 2.80e-01 0.0896 0.0828 0.5 B_Memory LOneK1K
ENSG00000146386 ABRACL -913734 sc-eQTL 2.35e-02 -0.13 0.0568 0.5 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 246778 sc-eQTL 4.69e-01 -0.0664 0.0916 0.5 B_Memory LOneK1K
ENSG00000024862 CCDC28A -658498 sc-eQTL 1.10e-01 -0.134 0.0833 0.5 B_Naive LOneK1K
ENSG00000027697 IFNGR1 895562 sc-eQTL 6.05e-01 0.0405 0.0782 0.5 B_Naive LOneK1K
ENSG00000051620 HEBP2 -288520 sc-eQTL 1.48e-01 0.0839 0.0578 0.5 B_Naive LOneK1K
ENSG00000112378 PERP 7592 sc-eQTL 7.28e-02 -0.153 0.0847 0.5 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 247797 sc-eQTL 5.22e-01 -0.0287 0.0448 0.5 B_Naive LOneK1K
ENSG00000135597 REPS1 -873250 sc-eQTL 6.56e-01 0.0298 0.0667 0.5 B_Naive LOneK1K
ENSG00000146386 ABRACL -913734 sc-eQTL 5.55e-01 0.0277 0.0468 0.5 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 246778 sc-eQTL 5.96e-01 -0.0424 0.0798 0.5 B_Naive LOneK1K
ENSG00000024862 CCDC28A -658498 sc-eQTL 8.92e-01 -0.00897 0.0662 0.5 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 895562 sc-eQTL 3.82e-01 0.0461 0.0526 0.5 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -288520 sc-eQTL 5.76e-02 0.0933 0.0489 0.5 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 247797 sc-eQTL 4.42e-01 -0.0374 0.0487 0.5 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -577560 sc-eQTL 7.55e-01 0.0271 0.0867 0.5 CD14_Mono LOneK1K
ENSG00000135597 REPS1 -873250 sc-eQTL 7.89e-01 0.0192 0.0714 0.5 CD14_Mono LOneK1K
ENSG00000146386 ABRACL -913734 sc-eQTL 2.40e-01 -0.0746 0.0633 0.5 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -577537 sc-eQTL 3.42e-01 0.0885 0.0929 0.5 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 246778 sc-eQTL 3.71e-01 -0.0523 0.0583 0.5 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A -658498 sc-eQTL 2.54e-01 -0.101 0.0884 0.5 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 895562 sc-eQTL 1.83e-01 0.0826 0.0618 0.5 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -288520 sc-eQTL 8.12e-01 0.0113 0.0474 0.5 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 247797 sc-eQTL 5.27e-01 -0.0367 0.0579 0.5 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -577560 sc-eQTL 8.69e-01 -0.0139 0.0842 0.5 CD16_Mono LOneK1K
ENSG00000135597 REPS1 -873250 sc-eQTL 9.60e-01 -0.0026 0.0524 0.5 CD16_Mono LOneK1K
ENSG00000146386 ABRACL -913734 sc-eQTL 3.12e-02 -0.165 0.0759 0.5 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -577537 sc-eQTL 1.99e-01 0.119 0.0927 0.5 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 246778 sc-eQTL 8.53e-01 0.0144 0.0777 0.5 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A -658498 sc-eQTL 6.47e-01 0.0382 0.0834 0.5 NK_CD56dim LOneK1K
ENSG00000027697 IFNGR1 895562 sc-eQTL 5.10e-01 -0.0385 0.0583 0.5 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -288520 sc-eQTL 7.67e-02 0.128 0.0718 0.5 NK_CD56dim LOneK1K
ENSG00000112378 PERP 7592 sc-eQTL 7.95e-01 0.0159 0.061 0.5 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 247797 sc-eQTL 9.30e-01 -0.00471 0.0532 0.5 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 -873250 sc-eQTL 5.80e-01 -0.0386 0.0695 0.5 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL -913734 sc-eQTL 2.12e-01 -0.056 0.0447 0.5 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 246778 sc-eQTL 8.97e-01 0.00961 0.0744 0.5 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112378 PERP 7592 eQTL 0.000766 0.085 0.0252 0.00768 0.00501 0.477
ENSG00000135597 REPS1 -873250 eQTL 0.00537 0.0443 0.0159 0.0016 0.0 0.477

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112378 PERP 7592 3.69e-05 3.37e-05 6.39e-06 1.58e-05 5.91e-06 1.46e-05 4.51e-05 4.59e-06 3.18e-05 1.56e-05 3.9e-05 1.79e-05 4.89e-05 1.45e-05 7.05e-06 1.92e-05 1.83e-05 2.59e-05 7.86e-06 6.89e-06 1.54e-05 3.37e-05 3.27e-05 8.98e-06 4.49e-05 8.02e-06 1.44e-05 1.29e-05 3.26e-05 2.59e-05 2.07e-05 1.64e-06 2.6e-06 7.07e-06 1.19e-05 5.77e-06 3.16e-06 3.11e-06 4.75e-06 3.35e-06 1.76e-06 3.92e-05 3.64e-06 3.55e-07 2.49e-06 3.9e-06 4.14e-06 1.58e-06 1.5e-06