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Genes within 1Mb (chr6:138114069:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -659440 sc-eQTL 2.83e-01 -0.0812 0.0754 0.5 B L1
ENSG00000027697 IFNGR1 894620 sc-eQTL 3.87e-01 0.0636 0.0734 0.5 B L1
ENSG00000051620 HEBP2 -289462 sc-eQTL 8.04e-02 0.101 0.0573 0.5 B L1
ENSG00000112378 PERP 6650 sc-eQTL 3.02e-01 -0.0594 0.0574 0.5 B L1
ENSG00000118503 TNFAIP3 246855 sc-eQTL 9.24e-01 -0.00441 0.0464 0.5 B L1
ENSG00000135597 REPS1 -874192 sc-eQTL 3.52e-01 0.0605 0.0648 0.5 B L1
ENSG00000146386 ABRACL -914676 sc-eQTL 6.27e-01 -0.0185 0.0381 0.5 B L1
ENSG00000237499 WAKMAR2 245836 sc-eQTL 6.04e-01 -0.0379 0.073 0.5 B L1
ENSG00000024862 CCDC28A -659440 sc-eQTL 3.36e-01 -0.0806 0.0836 0.5 CD4T L1
ENSG00000027697 IFNGR1 894620 sc-eQTL 5.21e-01 0.0315 0.049 0.5 CD4T L1
ENSG00000051620 HEBP2 -289462 sc-eQTL 4.48e-02 0.113 0.0557 0.5 CD4T L1
ENSG00000112378 PERP 6650 sc-eQTL 5.49e-03 0.146 0.0521 0.5 CD4T L1
ENSG00000118503 TNFAIP3 246855 sc-eQTL 4.46e-01 0.0379 0.0496 0.5 CD4T L1
ENSG00000135597 REPS1 -874192 sc-eQTL 5.79e-01 0.0305 0.0549 0.5 CD4T L1
ENSG00000146386 ABRACL -914676 sc-eQTL 6.75e-01 0.0169 0.0403 0.5 CD4T L1
ENSG00000237499 WAKMAR2 245836 sc-eQTL 9.77e-01 0.0018 0.0626 0.5 CD4T L1
ENSG00000024862 CCDC28A -659440 sc-eQTL 7.08e-01 0.0343 0.0913 0.5 CD8T L1
ENSG00000027697 IFNGR1 894620 sc-eQTL 6.79e-01 -0.0232 0.0558 0.5 CD8T L1
ENSG00000051620 HEBP2 -289462 sc-eQTL 6.43e-02 0.11 0.0593 0.5 CD8T L1
ENSG00000112378 PERP 6650 sc-eQTL 1.50e-01 0.0875 0.0606 0.5 CD8T L1
ENSG00000118503 TNFAIP3 246855 sc-eQTL 6.74e-01 0.0198 0.047 0.5 CD8T L1
ENSG00000135597 REPS1 -874192 sc-eQTL 6.38e-01 -0.029 0.0615 0.5 CD8T L1
ENSG00000146386 ABRACL -914676 sc-eQTL 8.84e-01 -0.0051 0.035 0.5 CD8T L1
ENSG00000237499 WAKMAR2 245836 sc-eQTL 7.54e-01 0.0217 0.069 0.5 CD8T L1
ENSG00000024862 CCDC28A -659440 sc-eQTL 2.25e-01 0.112 0.0925 0.498 DC L1
ENSG00000027697 IFNGR1 894620 sc-eQTL 4.66e-01 0.0503 0.0688 0.498 DC L1
ENSG00000051620 HEBP2 -289462 sc-eQTL 9.48e-01 0.00425 0.0653 0.498 DC L1
ENSG00000118503 TNFAIP3 246855 sc-eQTL 9.38e-01 -0.00572 0.0736 0.498 DC L1
ENSG00000135540 NHSL1 -578502 sc-eQTL 2.61e-01 0.0956 0.0849 0.498 DC L1
ENSG00000135597 REPS1 -874192 sc-eQTL 9.00e-01 -0.00943 0.0753 0.498 DC L1
ENSG00000146386 ABRACL -914676 sc-eQTL 6.20e-01 -0.0366 0.0737 0.498 DC L1
ENSG00000225177 AL590617.2 -578479 sc-eQTL 4.17e-01 0.0723 0.0888 0.498 DC L1
ENSG00000237499 WAKMAR2 245836 sc-eQTL 9.98e-01 -0.000175 0.075 0.498 DC L1
ENSG00000024862 CCDC28A -659440 sc-eQTL 2.64e-01 -0.0739 0.0659 0.5 Mono L1
ENSG00000027697 IFNGR1 894620 sc-eQTL 2.17e-01 0.0695 0.0562 0.5 Mono L1
ENSG00000051620 HEBP2 -289462 sc-eQTL 1.50e-01 0.0658 0.0455 0.5 Mono L1
ENSG00000118503 TNFAIP3 246855 sc-eQTL 7.51e-01 -0.0152 0.0478 0.5 Mono L1
ENSG00000135540 NHSL1 -578502 sc-eQTL 7.97e-01 0.0222 0.0864 0.5 Mono L1
ENSG00000135597 REPS1 -874192 sc-eQTL 9.85e-01 -0.000923 0.0506 0.5 Mono L1
ENSG00000146386 ABRACL -914676 sc-eQTL 2.29e-01 -0.0791 0.0656 0.5 Mono L1
ENSG00000225177 AL590617.2 -578479 sc-eQTL 2.96e-01 0.0939 0.0896 0.5 Mono L1
ENSG00000237499 WAKMAR2 245836 sc-eQTL 5.98e-01 -0.0312 0.0592 0.5 Mono L1
ENSG00000024862 CCDC28A -659440 sc-eQTL 7.19e-01 -0.0291 0.0805 0.5 NK L1
ENSG00000027697 IFNGR1 894620 sc-eQTL 4.20e-01 -0.0499 0.0618 0.5 NK L1
ENSG00000051620 HEBP2 -289462 sc-eQTL 2.37e-01 0.084 0.0707 0.5 NK L1
ENSG00000112378 PERP 6650 sc-eQTL 9.69e-01 -0.00231 0.0602 0.5 NK L1
ENSG00000118503 TNFAIP3 246855 sc-eQTL 9.65e-01 0.00229 0.0515 0.5 NK L1
ENSG00000135597 REPS1 -874192 sc-eQTL 8.80e-01 -0.01 0.0663 0.5 NK L1
ENSG00000146386 ABRACL -914676 sc-eQTL 3.71e-01 -0.0433 0.0483 0.5 NK L1
ENSG00000237499 WAKMAR2 245836 sc-eQTL 8.60e-01 0.0129 0.0731 0.5 NK L1
ENSG00000024862 CCDC28A -659440 sc-eQTL 8.68e-01 0.0159 0.0952 0.5 Other_T L1
ENSG00000027697 IFNGR1 894620 sc-eQTL 4.95e-01 0.0395 0.0579 0.5 Other_T L1
ENSG00000051620 HEBP2 -289462 sc-eQTL 1.29e-01 0.0932 0.0611 0.5 Other_T L1
ENSG00000112378 PERP 6650 sc-eQTL 3.01e-01 -0.0785 0.0756 0.5 Other_T L1
ENSG00000118503 TNFAIP3 246855 sc-eQTL 7.90e-01 -0.00961 0.0361 0.5 Other_T L1
ENSG00000135597 REPS1 -874192 sc-eQTL 2.61e-01 0.0833 0.0739 0.5 Other_T L1
ENSG00000146386 ABRACL -914676 sc-eQTL 5.34e-02 -0.0934 0.0481 0.5 Other_T L1
ENSG00000237499 WAKMAR2 245836 sc-eQTL 6.96e-01 -0.028 0.0716 0.5 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -659440 sc-eQTL 9.44e-01 0.00757 0.107 0.495 B_Activated L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 5.90e-01 0.0514 0.0953 0.495 B_Activated L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 5.22e-01 0.0599 0.0934 0.495 B_Activated L2
ENSG00000112378 PERP 6650 sc-eQTL 4.41e-01 0.0374 0.0485 0.495 B_Activated L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 5.35e-01 -0.0585 0.0941 0.495 B_Activated L2
ENSG00000135597 REPS1 -874192 sc-eQTL 9.01e-01 -0.0132 0.106 0.495 B_Activated L2
ENSG00000146386 ABRACL -914676 sc-eQTL 5.84e-01 -0.0528 0.0962 0.495 B_Activated L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 6.82e-01 0.0338 0.0822 0.495 B_Activated L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 3.36e-01 -0.0913 0.0947 0.498 B_Intermediate L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 9.30e-01 -0.00768 0.0877 0.498 B_Intermediate L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 3.63e-02 0.137 0.0651 0.498 B_Intermediate L2
ENSG00000112378 PERP 6650 sc-eQTL 1.23e-01 -0.129 0.0832 0.498 B_Intermediate L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 9.97e-01 0.000254 0.0657 0.498 B_Intermediate L2
ENSG00000135597 REPS1 -874192 sc-eQTL 1.22e-01 0.137 0.0882 0.498 B_Intermediate L2
ENSG00000146386 ABRACL -914676 sc-eQTL 3.27e-01 -0.0739 0.0753 0.498 B_Intermediate L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 2.65e-02 -0.206 0.0921 0.498 B_Intermediate L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 4.31e-01 0.0775 0.0983 0.496 B_Memory L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 7.03e-01 0.0371 0.0971 0.496 B_Memory L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 1.60e-02 0.177 0.073 0.496 B_Memory L2
ENSG00000112378 PERP 6650 sc-eQTL 7.59e-01 -0.0283 0.0923 0.496 B_Memory L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 5.65e-01 -0.0366 0.0635 0.496 B_Memory L2
ENSG00000135597 REPS1 -874192 sc-eQTL 9.10e-01 -0.0104 0.0923 0.496 B_Memory L2
ENSG00000146386 ABRACL -914676 sc-eQTL 2.36e-02 -0.164 0.0721 0.496 B_Memory L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 1.96e-01 0.122 0.0942 0.496 B_Memory L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 1.84e-01 -0.12 0.0902 0.5 B_Naive1 L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 3.05e-01 0.0768 0.0747 0.5 B_Naive1 L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 1.00e-01 0.105 0.0633 0.5 B_Naive1 L2
ENSG00000112378 PERP 6650 sc-eQTL 5.05e-02 -0.168 0.0856 0.5 B_Naive1 L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 2.08e-01 -0.0631 0.0499 0.5 B_Naive1 L2
ENSG00000135597 REPS1 -874192 sc-eQTL 9.15e-01 0.00781 0.0731 0.5 B_Naive1 L2
ENSG00000146386 ABRACL -914676 sc-eQTL 7.28e-01 0.0178 0.0511 0.5 B_Naive1 L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 6.08e-01 -0.0403 0.0784 0.5 B_Naive1 L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 2.53e-01 -0.101 0.0883 0.498 B_Naive2 L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 6.06e-01 -0.0471 0.0912 0.498 B_Naive2 L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 4.61e-02 0.12 0.06 0.498 B_Naive2 L2
ENSG00000112378 PERP 6650 sc-eQTL 8.73e-01 -0.0116 0.0727 0.498 B_Naive2 L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 8.53e-01 -0.0135 0.0727 0.498 B_Naive2 L2
ENSG00000135597 REPS1 -874192 sc-eQTL 9.25e-01 -0.00753 0.0795 0.498 B_Naive2 L2
ENSG00000146386 ABRACL -914676 sc-eQTL 5.39e-01 -0.036 0.0585 0.498 B_Naive2 L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 8.27e-01 0.0205 0.094 0.498 B_Naive2 L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 4.30e-01 0.0719 0.091 0.498 CD4_CTL L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 1.75e-01 0.116 0.085 0.498 CD4_CTL L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 7.35e-01 0.0267 0.0787 0.498 CD4_CTL L2
ENSG00000112378 PERP 6650 sc-eQTL 2.00e-01 0.123 0.0955 0.498 CD4_CTL L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 1.54e-01 0.0797 0.0557 0.498 CD4_CTL L2
ENSG00000135597 REPS1 -874192 sc-eQTL 3.15e-01 -0.0898 0.0891 0.498 CD4_CTL L2
ENSG00000146386 ABRACL -914676 sc-eQTL 7.89e-01 -0.0219 0.0814 0.498 CD4_CTL L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 8.32e-01 -0.0186 0.0871 0.498 CD4_CTL L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 3.89e-01 -0.0759 0.088 0.5 CD4_Naive L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 7.70e-01 0.0136 0.0466 0.5 CD4_Naive L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 4.67e-02 0.109 0.0544 0.5 CD4_Naive L2
ENSG00000112378 PERP 6650 sc-eQTL 4.18e-02 0.147 0.0719 0.5 CD4_Naive L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 4.03e-01 0.0426 0.0508 0.5 CD4_Naive L2
ENSG00000135597 REPS1 -874192 sc-eQTL 9.74e-01 -0.00199 0.0607 0.5 CD4_Naive L2
ENSG00000146386 ABRACL -914676 sc-eQTL 5.87e-01 0.0222 0.0409 0.5 CD4_Naive L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 6.62e-01 0.0288 0.0659 0.5 CD4_Naive L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 2.20e-01 -0.106 0.0865 0.5 CD4_TCM L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 5.60e-01 0.0381 0.0652 0.5 CD4_TCM L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 2.69e-02 0.142 0.0638 0.5 CD4_TCM L2
ENSG00000112378 PERP 6650 sc-eQTL 3.26e-03 0.236 0.0794 0.5 CD4_TCM L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 5.44e-01 0.0286 0.047 0.5 CD4_TCM L2
ENSG00000135597 REPS1 -874192 sc-eQTL 1.08e-01 0.106 0.0654 0.5 CD4_TCM L2
ENSG00000146386 ABRACL -914676 sc-eQTL 8.52e-01 0.00942 0.0506 0.5 CD4_TCM L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 7.31e-01 -0.0227 0.0659 0.5 CD4_TCM L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 1.18e-01 -0.15 0.0954 0.5 CD4_TEM L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 3.09e-01 0.074 0.0725 0.5 CD4_TEM L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 4.11e-01 0.0538 0.0653 0.5 CD4_TEM L2
ENSG00000112378 PERP 6650 sc-eQTL 7.02e-01 -0.0291 0.076 0.5 CD4_TEM L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 4.23e-01 -0.0387 0.0482 0.5 CD4_TEM L2
ENSG00000135597 REPS1 -874192 sc-eQTL 8.83e-01 0.012 0.0814 0.5 CD4_TEM L2
ENSG00000146386 ABRACL -914676 sc-eQTL 8.68e-01 0.00968 0.058 0.5 CD4_TEM L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 8.78e-01 -0.0119 0.0774 0.5 CD4_TEM L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 3.85e-01 -0.0852 0.0978 0.5 CD8_CTL L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 3.21e-01 -0.0656 0.0659 0.5 CD8_CTL L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 9.16e-02 0.118 0.0695 0.5 CD8_CTL L2
ENSG00000112378 PERP 6650 sc-eQTL 1.40e-01 0.129 0.0869 0.5 CD8_CTL L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 7.32e-01 0.019 0.0556 0.5 CD8_CTL L2
ENSG00000135597 REPS1 -874192 sc-eQTL 3.39e-01 -0.073 0.0763 0.5 CD8_CTL L2
ENSG00000146386 ABRACL -914676 sc-eQTL 5.56e-01 0.0364 0.0618 0.5 CD8_CTL L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 5.67e-01 -0.0447 0.0781 0.5 CD8_CTL L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 9.52e-01 0.00559 0.0931 0.5 CD8_Naive L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 2.22e-01 0.0793 0.0647 0.5 CD8_Naive L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 6.96e-01 0.0232 0.0595 0.5 CD8_Naive L2
ENSG00000112378 PERP 6650 sc-eQTL 2.01e-01 0.0913 0.0712 0.5 CD8_Naive L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 7.85e-01 0.0139 0.0508 0.5 CD8_Naive L2
ENSG00000135597 REPS1 -874192 sc-eQTL 9.25e-01 -0.00678 0.072 0.5 CD8_Naive L2
ENSG00000146386 ABRACL -914676 sc-eQTL 4.43e-01 -0.029 0.0377 0.5 CD8_Naive L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 7.52e-01 -0.0238 0.075 0.5 CD8_Naive L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 6.99e-01 -0.0407 0.105 0.5 CD8_TCM L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 2.46e-01 -0.101 0.0866 0.5 CD8_TCM L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 3.17e-01 0.074 0.0738 0.5 CD8_TCM L2
ENSG00000112378 PERP 6650 sc-eQTL 8.04e-01 0.0243 0.0977 0.5 CD8_TCM L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 3.22e-01 0.0466 0.047 0.5 CD8_TCM L2
ENSG00000135597 REPS1 -874192 sc-eQTL 3.22e-01 -0.0793 0.0798 0.5 CD8_TCM L2
ENSG00000146386 ABRACL -914676 sc-eQTL 8.72e-02 0.136 0.0791 0.5 CD8_TCM L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 7.50e-01 -0.0275 0.0861 0.5 CD8_TCM L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 2.26e-01 0.119 0.0979 0.493 CD8_TEM L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 7.96e-01 -0.022 0.0851 0.493 CD8_TEM L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 3.72e-01 0.0798 0.0892 0.493 CD8_TEM L2
ENSG00000112378 PERP 6650 sc-eQTL 4.20e-01 0.0823 0.102 0.493 CD8_TEM L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 8.37e-01 0.0129 0.0628 0.493 CD8_TEM L2
ENSG00000135597 REPS1 -874192 sc-eQTL 6.26e-01 -0.0467 0.0957 0.493 CD8_TEM L2
ENSG00000146386 ABRACL -914676 sc-eQTL 6.86e-01 -0.0298 0.0738 0.493 CD8_TEM L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 2.13e-01 0.116 0.0928 0.493 CD8_TEM L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 9.92e-01 -0.00102 0.104 0.5 MAIT L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 1.99e-01 0.0867 0.0673 0.5 MAIT L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 1.15e-02 0.181 0.0711 0.5 MAIT L2
ENSG00000112378 PERP 6650 sc-eQTL 6.28e-01 -0.0464 0.0955 0.5 MAIT L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 6.08e-01 -0.0233 0.0454 0.5 MAIT L2
ENSG00000135597 REPS1 -874192 sc-eQTL 7.22e-01 0.0304 0.0852 0.5 MAIT L2
ENSG00000146386 ABRACL -914676 sc-eQTL 6.55e-01 0.0281 0.0626 0.5 MAIT L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 2.48e-01 0.097 0.0838 0.5 MAIT L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 8.85e-03 -0.253 0.0958 0.496 NK_CD56bright L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 2.74e-01 -0.0833 0.0758 0.496 NK_CD56bright L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 7.96e-01 -0.0215 0.083 0.496 NK_CD56bright L2
ENSG00000112378 PERP 6650 sc-eQTL 5.52e-02 -0.17 0.088 0.496 NK_CD56bright L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 3.30e-01 0.0551 0.0565 0.496 NK_CD56bright L2
ENSG00000135597 REPS1 -874192 sc-eQTL 3.35e-01 0.0794 0.0822 0.496 NK_CD56bright L2
ENSG00000146386 ABRACL -914676 sc-eQTL 6.43e-01 -0.0353 0.0759 0.496 NK_CD56bright L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 4.08e-01 -0.0748 0.0901 0.496 NK_CD56bright L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 8.14e-01 0.0204 0.0864 0.5 NK_CD56dim L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 9.59e-01 0.00289 0.0568 0.5 NK_CD56dim L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 9.99e-02 0.126 0.0762 0.5 NK_CD56dim L2
ENSG00000112378 PERP 6650 sc-eQTL 1.92e-01 0.0898 0.0685 0.5 NK_CD56dim L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 6.65e-01 -0.0232 0.0535 0.5 NK_CD56dim L2
ENSG00000135597 REPS1 -874192 sc-eQTL 6.53e-01 -0.0317 0.0705 0.5 NK_CD56dim L2
ENSG00000146386 ABRACL -914676 sc-eQTL 1.86e-01 -0.063 0.0475 0.5 NK_CD56dim L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 4.86e-01 0.0558 0.08 0.5 NK_CD56dim L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 2.91e-01 0.108 0.102 0.491 NK_HLA L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 7.74e-01 0.0215 0.075 0.491 NK_HLA L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 2.14e-01 0.108 0.0866 0.491 NK_HLA L2
ENSG00000112378 PERP 6650 sc-eQTL 6.35e-01 0.0367 0.0773 0.491 NK_HLA L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 5.98e-01 -0.0314 0.0594 0.491 NK_HLA L2
ENSG00000135597 REPS1 -874192 sc-eQTL 8.87e-01 -0.0134 0.0942 0.491 NK_HLA L2
ENSG00000146386 ABRACL -914676 sc-eQTL 2.05e-01 -0.0981 0.0772 0.491 NK_HLA L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 4.53e-01 0.0719 0.0957 0.491 NK_HLA L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 9.72e-01 0.00317 0.0907 0.5 NK_cytokine L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 6.53e-01 -0.0275 0.0611 0.5 NK_cytokine L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 3.26e-01 0.0768 0.078 0.5 NK_cytokine L2
ENSG00000112378 PERP 6650 sc-eQTL 5.46e-01 0.044 0.0728 0.5 NK_cytokine L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 7.03e-01 -0.0209 0.0546 0.5 NK_cytokine L2
ENSG00000135597 REPS1 -874192 sc-eQTL 8.58e-01 0.0144 0.0807 0.5 NK_cytokine L2
ENSG00000146386 ABRACL -914676 sc-eQTL 5.35e-01 -0.0323 0.0519 0.5 NK_cytokine L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 6.87e-01 -0.0332 0.0822 0.5 NK_cytokine L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 5.63e-01 -0.0673 0.116 0.47 PB L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 4.95e-01 -0.0838 0.122 0.47 PB L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 4.01e-01 0.0867 0.103 0.47 PB L2
ENSG00000112378 PERP 6650 sc-eQTL 1.75e-01 0.106 0.078 0.47 PB L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 8.83e-01 0.0141 0.0954 0.47 PB L2
ENSG00000135597 REPS1 -874192 sc-eQTL 3.82e-01 -0.0982 0.112 0.47 PB L2
ENSG00000146386 ABRACL -914676 sc-eQTL 3.02e-01 -0.0811 0.0782 0.47 PB L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 9.14e-01 -0.0124 0.115 0.47 PB L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 7.92e-01 0.026 0.0983 0.502 Pro_T L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 8.00e-01 0.0191 0.075 0.502 Pro_T L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 5.27e-01 0.0497 0.0783 0.502 Pro_T L2
ENSG00000112378 PERP 6650 sc-eQTL 5.69e-01 -0.0413 0.0724 0.502 Pro_T L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 2.74e-01 -0.05 0.0456 0.502 Pro_T L2
ENSG00000135597 REPS1 -874192 sc-eQTL 1.12e-01 0.145 0.0907 0.502 Pro_T L2
ENSG00000146386 ABRACL -914676 sc-eQTL 3.44e-01 -0.0557 0.0587 0.502 Pro_T L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 6.76e-01 0.0371 0.0886 0.502 Pro_T L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 8.82e-02 -0.159 0.0929 0.5 Treg L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 6.09e-01 0.0451 0.088 0.5 Treg L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 1.22e-01 0.0988 0.0636 0.5 Treg L2
ENSG00000112378 PERP 6650 sc-eQTL 2.18e-01 0.124 0.1 0.5 Treg L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 4.75e-01 -0.04 0.0559 0.5 Treg L2
ENSG00000135597 REPS1 -874192 sc-eQTL 4.10e-01 -0.0663 0.0803 0.5 Treg L2
ENSG00000146386 ABRACL -914676 sc-eQTL 9.13e-01 -0.00746 0.0685 0.5 Treg L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 9.52e-01 -0.0051 0.0854 0.5 Treg L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 1.72e-02 0.218 0.0908 0.49 cDC L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 8.56e-01 0.0136 0.0751 0.49 cDC L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 8.69e-01 0.0109 0.0661 0.49 cDC L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 8.67e-01 -0.0124 0.0741 0.49 cDC L2
ENSG00000135540 NHSL1 -578502 sc-eQTL 1.72e-01 0.117 0.0854 0.49 cDC L2
ENSG00000135597 REPS1 -874192 sc-eQTL 8.30e-01 0.0212 0.0989 0.49 cDC L2
ENSG00000146386 ABRACL -914676 sc-eQTL 3.11e-01 -0.0819 0.0807 0.49 cDC L2
ENSG00000225177 AL590617.2 -578479 sc-eQTL 4.81e-01 0.0668 0.0946 0.49 cDC L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 1.79e-01 0.13 0.096 0.49 cDC L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 4.47e-01 -0.0547 0.0718 0.5 cMono_IL1B L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 5.28e-01 0.0331 0.0524 0.5 cMono_IL1B L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 1.24e-01 0.0793 0.0514 0.5 cMono_IL1B L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 3.28e-01 -0.0552 0.0563 0.5 cMono_IL1B L2
ENSG00000135540 NHSL1 -578502 sc-eQTL 3.64e-01 0.0786 0.0864 0.5 cMono_IL1B L2
ENSG00000135597 REPS1 -874192 sc-eQTL 5.53e-01 0.0459 0.0772 0.5 cMono_IL1B L2
ENSG00000146386 ABRACL -914676 sc-eQTL 2.62e-01 -0.0728 0.0648 0.5 cMono_IL1B L2
ENSG00000225177 AL590617.2 -578479 sc-eQTL 6.07e-01 0.0467 0.0906 0.5 cMono_IL1B L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 4.10e-01 -0.0497 0.0602 0.5 cMono_IL1B L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 3.35e-01 0.0798 0.0825 0.5 cMono_S100A L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 2.54e-01 0.0693 0.0606 0.5 cMono_S100A L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 8.71e-02 0.0966 0.0562 0.5 cMono_S100A L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 5.06e-01 -0.0359 0.054 0.5 cMono_S100A L2
ENSG00000135540 NHSL1 -578502 sc-eQTL 3.86e-01 -0.0769 0.0885 0.5 cMono_S100A L2
ENSG00000135597 REPS1 -874192 sc-eQTL 2.87e-01 -0.0892 0.0836 0.5 cMono_S100A L2
ENSG00000146386 ABRACL -914676 sc-eQTL 2.10e-01 -0.0914 0.0726 0.5 cMono_S100A L2
ENSG00000225177 AL590617.2 -578479 sc-eQTL 4.74e-01 0.0696 0.097 0.5 cMono_S100A L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 2.23e-01 -0.0944 0.0773 0.5 cMono_S100A L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 2.25e-01 0.14 0.115 0.509 gdT L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 2.88e-01 0.0979 0.0918 0.509 gdT L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 7.80e-01 -0.0307 0.11 0.509 gdT L2
ENSG00000112378 PERP 6650 sc-eQTL 8.17e-01 -0.0236 0.102 0.509 gdT L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 4.32e-01 -0.0446 0.0566 0.509 gdT L2
ENSG00000135597 REPS1 -874192 sc-eQTL 6.22e-01 -0.0558 0.113 0.509 gdT L2
ENSG00000146386 ABRACL -914676 sc-eQTL 1.16e-01 -0.133 0.0844 0.509 gdT L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 2.92e-01 -0.108 0.102 0.509 gdT L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 4.23e-02 -0.192 0.0941 0.493 intMono L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 8.86e-02 0.109 0.0636 0.493 intMono L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 8.27e-01 0.014 0.0638 0.493 intMono L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 1.45e-01 -0.0805 0.055 0.493 intMono L2
ENSG00000135540 NHSL1 -578502 sc-eQTL 3.28e-01 -0.0841 0.0859 0.493 intMono L2
ENSG00000135597 REPS1 -874192 sc-eQTL 5.02e-01 -0.0597 0.0888 0.493 intMono L2
ENSG00000146386 ABRACL -914676 sc-eQTL 1.45e-02 -0.197 0.0799 0.493 intMono L2
ENSG00000225177 AL590617.2 -578479 sc-eQTL 8.27e-01 0.0212 0.0965 0.493 intMono L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 4.64e-01 -0.0604 0.0823 0.493 intMono L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 7.76e-01 -0.0256 0.0896 0.5 ncMono L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 4.53e-01 0.0573 0.0762 0.5 ncMono L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 6.32e-01 0.0256 0.0534 0.5 ncMono L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 9.51e-01 0.00412 0.0675 0.5 ncMono L2
ENSG00000135540 NHSL1 -578502 sc-eQTL 7.00e-01 0.0333 0.0861 0.5 ncMono L2
ENSG00000135597 REPS1 -874192 sc-eQTL 1.65e-01 0.0899 0.0646 0.5 ncMono L2
ENSG00000146386 ABRACL -914676 sc-eQTL 4.97e-01 -0.0532 0.0781 0.5 ncMono L2
ENSG00000225177 AL590617.2 -578479 sc-eQTL 2.85e-02 0.208 0.0945 0.5 ncMono L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 5.32e-01 0.0528 0.0844 0.5 ncMono L2
ENSG00000024862 CCDC28A -659440 sc-eQTL 7.75e-01 -0.0302 0.105 0.497 pDC L2
ENSG00000027697 IFNGR1 894620 sc-eQTL 9.52e-01 0.00535 0.0895 0.497 pDC L2
ENSG00000051620 HEBP2 -289462 sc-eQTL 8.36e-01 0.0171 0.082 0.497 pDC L2
ENSG00000118503 TNFAIP3 246855 sc-eQTL 3.17e-01 -0.0831 0.0827 0.497 pDC L2
ENSG00000135540 NHSL1 -578502 sc-eQTL 9.78e-01 -0.00227 0.0817 0.497 pDC L2
ENSG00000135597 REPS1 -874192 sc-eQTL 9.41e-01 0.00611 0.0827 0.497 pDC L2
ENSG00000146386 ABRACL -914676 sc-eQTL 8.73e-01 0.0145 0.0904 0.497 pDC L2
ENSG00000225177 AL590617.2 -578479 sc-eQTL 7.88e-01 0.0221 0.082 0.497 pDC L2
ENSG00000237499 WAKMAR2 245836 sc-eQTL 9.01e-01 -0.0105 0.0842 0.497 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -659440 sc-eQTL 6.81e-01 -0.037 0.09 0.5 B_Memory LOneK1K
ENSG00000027697 IFNGR1 894620 sc-eQTL 6.78e-01 0.0319 0.0768 0.5 B_Memory LOneK1K
ENSG00000051620 HEBP2 -289462 sc-eQTL 4.27e-02 0.126 0.0617 0.5 B_Memory LOneK1K
ENSG00000112378 PERP 6650 sc-eQTL 6.23e-01 -0.0404 0.0821 0.5 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 246855 sc-eQTL 3.47e-01 0.051 0.0541 0.5 B_Memory LOneK1K
ENSG00000135597 REPS1 -874192 sc-eQTL 2.80e-01 0.0896 0.0828 0.5 B_Memory LOneK1K
ENSG00000146386 ABRACL -914676 sc-eQTL 2.35e-02 -0.13 0.0568 0.5 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 245836 sc-eQTL 4.69e-01 -0.0664 0.0916 0.5 B_Memory LOneK1K
ENSG00000024862 CCDC28A -659440 sc-eQTL 1.10e-01 -0.134 0.0833 0.5 B_Naive LOneK1K
ENSG00000027697 IFNGR1 894620 sc-eQTL 6.05e-01 0.0405 0.0782 0.5 B_Naive LOneK1K
ENSG00000051620 HEBP2 -289462 sc-eQTL 1.48e-01 0.0839 0.0578 0.5 B_Naive LOneK1K
ENSG00000112378 PERP 6650 sc-eQTL 7.28e-02 -0.153 0.0847 0.5 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 246855 sc-eQTL 5.22e-01 -0.0287 0.0448 0.5 B_Naive LOneK1K
ENSG00000135597 REPS1 -874192 sc-eQTL 6.56e-01 0.0298 0.0667 0.5 B_Naive LOneK1K
ENSG00000146386 ABRACL -914676 sc-eQTL 5.55e-01 0.0277 0.0468 0.5 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 245836 sc-eQTL 5.96e-01 -0.0424 0.0798 0.5 B_Naive LOneK1K
ENSG00000024862 CCDC28A -659440 sc-eQTL 8.92e-01 -0.00897 0.0662 0.5 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 894620 sc-eQTL 3.82e-01 0.0461 0.0526 0.5 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -289462 sc-eQTL 5.76e-02 0.0933 0.0489 0.5 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 246855 sc-eQTL 4.42e-01 -0.0374 0.0487 0.5 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -578502 sc-eQTL 7.55e-01 0.0271 0.0867 0.5 CD14_Mono LOneK1K
ENSG00000135597 REPS1 -874192 sc-eQTL 7.89e-01 0.0192 0.0714 0.5 CD14_Mono LOneK1K
ENSG00000146386 ABRACL -914676 sc-eQTL 2.40e-01 -0.0746 0.0633 0.5 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -578479 sc-eQTL 3.42e-01 0.0885 0.0929 0.5 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 245836 sc-eQTL 3.71e-01 -0.0523 0.0583 0.5 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A -659440 sc-eQTL 2.54e-01 -0.101 0.0884 0.5 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 894620 sc-eQTL 1.83e-01 0.0826 0.0618 0.5 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -289462 sc-eQTL 8.12e-01 0.0113 0.0474 0.5 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 246855 sc-eQTL 5.27e-01 -0.0367 0.0579 0.5 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -578502 sc-eQTL 8.69e-01 -0.0139 0.0842 0.5 CD16_Mono LOneK1K
ENSG00000135597 REPS1 -874192 sc-eQTL 9.60e-01 -0.0026 0.0524 0.5 CD16_Mono LOneK1K
ENSG00000146386 ABRACL -914676 sc-eQTL 3.12e-02 -0.165 0.0759 0.5 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -578479 sc-eQTL 1.99e-01 0.119 0.0927 0.5 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 245836 sc-eQTL 8.53e-01 0.0144 0.0777 0.5 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A -659440 sc-eQTL 6.47e-01 0.0382 0.0834 0.5 NK_CD56dim LOneK1K
ENSG00000027697 IFNGR1 894620 sc-eQTL 5.10e-01 -0.0385 0.0583 0.5 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -289462 sc-eQTL 7.67e-02 0.128 0.0718 0.5 NK_CD56dim LOneK1K
ENSG00000112378 PERP 6650 sc-eQTL 7.95e-01 0.0159 0.061 0.5 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 246855 sc-eQTL 9.30e-01 -0.00471 0.0532 0.5 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 -874192 sc-eQTL 5.80e-01 -0.0386 0.0695 0.5 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL -914676 sc-eQTL 2.12e-01 -0.056 0.0447 0.5 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 245836 sc-eQTL 8.97e-01 0.00961 0.0744 0.5 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112378 PERP 6650 eQTL 0.000778 0.0849 0.0252 0.00758 0.00495 0.476
ENSG00000135597 REPS1 -874192 eQTL 0.00444 0.0453 0.0159 0.00181 0.0 0.476

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 \N 894620 2.6e-07 1.11e-07 3.44e-08 1.68e-07 1.02e-07 9.05e-08 1.36e-07 5.29e-08 1.32e-07 4.23e-08 1.59e-07 7.49e-08 1.2e-07 6.1e-08 4.89e-08 7.76e-08 5.15e-08 1.06e-07 5.12e-08 2.85e-08 1.03e-07 1.31e-07 1.31e-07 5.01e-08 1.33e-07 1.03e-07 1.11e-07 8.49e-08 1.05e-07 1.09e-07 9.5e-08 3.82e-08 2.75e-08 8e-08 9.88e-08 4.12e-08 5.26e-08 8.78e-08 8.14e-08 3.59e-08 3.55e-08 1.4e-07 4.36e-08 3.26e-08 9.88e-08 1.75e-08 1.45e-07 4.6e-09 4.74e-08
ENSG00000112378 PERP 6650 3.49e-05 3.22e-05 6.26e-06 1.55e-05 5.76e-06 1.41e-05 4.44e-05 4.49e-06 3.08e-05 1.53e-05 3.76e-05 1.72e-05 4.7e-05 1.36e-05 6.95e-06 1.86e-05 1.69e-05 2.52e-05 7.62e-06 6.6e-06 1.5e-05 3.3e-05 3.15e-05 8.82e-06 4.33e-05 7.92e-06 1.38e-05 1.28e-05 3.15e-05 2.5e-05 1.98e-05 1.64e-06 2.56e-06 7.05e-06 1.15e-05 5.68e-06 3.1e-06 3.17e-06 4.58e-06 3.3e-06 1.77e-06 3.71e-05 3.58e-06 3.55e-07 2.49e-06 3.81e-06 4.09e-06 1.58e-06 1.49e-06