logo

Genes within 1Mb (chr6:138111711:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -661798 sc-eQTL 2.83e-01 -0.0812 0.0754 0.5 B L1
ENSG00000027697 IFNGR1 892262 sc-eQTL 3.87e-01 0.0636 0.0734 0.5 B L1
ENSG00000051620 HEBP2 -291820 sc-eQTL 8.04e-02 0.101 0.0573 0.5 B L1
ENSG00000112378 PERP 4292 sc-eQTL 3.02e-01 -0.0594 0.0574 0.5 B L1
ENSG00000118503 TNFAIP3 244497 sc-eQTL 9.24e-01 -0.00441 0.0464 0.5 B L1
ENSG00000135597 REPS1 -876550 sc-eQTL 3.52e-01 0.0605 0.0648 0.5 B L1
ENSG00000146386 ABRACL -917034 sc-eQTL 6.27e-01 -0.0185 0.0381 0.5 B L1
ENSG00000237499 WAKMAR2 243478 sc-eQTL 6.04e-01 -0.0379 0.073 0.5 B L1
ENSG00000024862 CCDC28A -661798 sc-eQTL 3.36e-01 -0.0806 0.0836 0.5 CD4T L1
ENSG00000027697 IFNGR1 892262 sc-eQTL 5.21e-01 0.0315 0.049 0.5 CD4T L1
ENSG00000051620 HEBP2 -291820 sc-eQTL 4.48e-02 0.113 0.0557 0.5 CD4T L1
ENSG00000112378 PERP 4292 sc-eQTL 5.49e-03 0.146 0.0521 0.5 CD4T L1
ENSG00000118503 TNFAIP3 244497 sc-eQTL 4.46e-01 0.0379 0.0496 0.5 CD4T L1
ENSG00000135597 REPS1 -876550 sc-eQTL 5.79e-01 0.0305 0.0549 0.5 CD4T L1
ENSG00000146386 ABRACL -917034 sc-eQTL 6.75e-01 0.0169 0.0403 0.5 CD4T L1
ENSG00000237499 WAKMAR2 243478 sc-eQTL 9.77e-01 0.0018 0.0626 0.5 CD4T L1
ENSG00000024862 CCDC28A -661798 sc-eQTL 7.08e-01 0.0343 0.0913 0.5 CD8T L1
ENSG00000027697 IFNGR1 892262 sc-eQTL 6.79e-01 -0.0232 0.0558 0.5 CD8T L1
ENSG00000051620 HEBP2 -291820 sc-eQTL 6.43e-02 0.11 0.0593 0.5 CD8T L1
ENSG00000112378 PERP 4292 sc-eQTL 1.50e-01 0.0875 0.0606 0.5 CD8T L1
ENSG00000118503 TNFAIP3 244497 sc-eQTL 6.74e-01 0.0198 0.047 0.5 CD8T L1
ENSG00000135597 REPS1 -876550 sc-eQTL 6.38e-01 -0.029 0.0615 0.5 CD8T L1
ENSG00000146386 ABRACL -917034 sc-eQTL 8.84e-01 -0.0051 0.035 0.5 CD8T L1
ENSG00000237499 WAKMAR2 243478 sc-eQTL 7.54e-01 0.0217 0.069 0.5 CD8T L1
ENSG00000024862 CCDC28A -661798 sc-eQTL 2.25e-01 0.112 0.0925 0.498 DC L1
ENSG00000027697 IFNGR1 892262 sc-eQTL 4.66e-01 0.0503 0.0688 0.498 DC L1
ENSG00000051620 HEBP2 -291820 sc-eQTL 9.48e-01 0.00425 0.0653 0.498 DC L1
ENSG00000118503 TNFAIP3 244497 sc-eQTL 9.38e-01 -0.00572 0.0736 0.498 DC L1
ENSG00000135540 NHSL1 -580860 sc-eQTL 2.61e-01 0.0956 0.0849 0.498 DC L1
ENSG00000135597 REPS1 -876550 sc-eQTL 9.00e-01 -0.00943 0.0753 0.498 DC L1
ENSG00000146386 ABRACL -917034 sc-eQTL 6.20e-01 -0.0366 0.0737 0.498 DC L1
ENSG00000225177 AL590617.2 -580837 sc-eQTL 4.17e-01 0.0723 0.0888 0.498 DC L1
ENSG00000237499 WAKMAR2 243478 sc-eQTL 9.98e-01 -0.000175 0.075 0.498 DC L1
ENSG00000024862 CCDC28A -661798 sc-eQTL 2.64e-01 -0.0739 0.0659 0.5 Mono L1
ENSG00000027697 IFNGR1 892262 sc-eQTL 2.17e-01 0.0695 0.0562 0.5 Mono L1
ENSG00000051620 HEBP2 -291820 sc-eQTL 1.50e-01 0.0658 0.0455 0.5 Mono L1
ENSG00000118503 TNFAIP3 244497 sc-eQTL 7.51e-01 -0.0152 0.0478 0.5 Mono L1
ENSG00000135540 NHSL1 -580860 sc-eQTL 7.97e-01 0.0222 0.0864 0.5 Mono L1
ENSG00000135597 REPS1 -876550 sc-eQTL 9.85e-01 -0.000923 0.0506 0.5 Mono L1
ENSG00000146386 ABRACL -917034 sc-eQTL 2.29e-01 -0.0791 0.0656 0.5 Mono L1
ENSG00000225177 AL590617.2 -580837 sc-eQTL 2.96e-01 0.0939 0.0896 0.5 Mono L1
ENSG00000237499 WAKMAR2 243478 sc-eQTL 5.98e-01 -0.0312 0.0592 0.5 Mono L1
ENSG00000024862 CCDC28A -661798 sc-eQTL 7.19e-01 -0.0291 0.0805 0.5 NK L1
ENSG00000027697 IFNGR1 892262 sc-eQTL 4.20e-01 -0.0499 0.0618 0.5 NK L1
ENSG00000051620 HEBP2 -291820 sc-eQTL 2.37e-01 0.084 0.0707 0.5 NK L1
ENSG00000112378 PERP 4292 sc-eQTL 9.69e-01 -0.00231 0.0602 0.5 NK L1
ENSG00000118503 TNFAIP3 244497 sc-eQTL 9.65e-01 0.00229 0.0515 0.5 NK L1
ENSG00000135597 REPS1 -876550 sc-eQTL 8.80e-01 -0.01 0.0663 0.5 NK L1
ENSG00000146386 ABRACL -917034 sc-eQTL 3.71e-01 -0.0433 0.0483 0.5 NK L1
ENSG00000237499 WAKMAR2 243478 sc-eQTL 8.60e-01 0.0129 0.0731 0.5 NK L1
ENSG00000024862 CCDC28A -661798 sc-eQTL 8.68e-01 0.0159 0.0952 0.5 Other_T L1
ENSG00000027697 IFNGR1 892262 sc-eQTL 4.95e-01 0.0395 0.0579 0.5 Other_T L1
ENSG00000051620 HEBP2 -291820 sc-eQTL 1.29e-01 0.0932 0.0611 0.5 Other_T L1
ENSG00000112378 PERP 4292 sc-eQTL 3.01e-01 -0.0785 0.0756 0.5 Other_T L1
ENSG00000118503 TNFAIP3 244497 sc-eQTL 7.90e-01 -0.00961 0.0361 0.5 Other_T L1
ENSG00000135597 REPS1 -876550 sc-eQTL 2.61e-01 0.0833 0.0739 0.5 Other_T L1
ENSG00000146386 ABRACL -917034 sc-eQTL 5.34e-02 -0.0934 0.0481 0.5 Other_T L1
ENSG00000237499 WAKMAR2 243478 sc-eQTL 6.96e-01 -0.028 0.0716 0.5 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -661798 sc-eQTL 9.44e-01 0.00757 0.107 0.495 B_Activated L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 5.90e-01 0.0514 0.0953 0.495 B_Activated L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 5.22e-01 0.0599 0.0934 0.495 B_Activated L2
ENSG00000112378 PERP 4292 sc-eQTL 4.41e-01 0.0374 0.0485 0.495 B_Activated L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 5.35e-01 -0.0585 0.0941 0.495 B_Activated L2
ENSG00000135597 REPS1 -876550 sc-eQTL 9.01e-01 -0.0132 0.106 0.495 B_Activated L2
ENSG00000146386 ABRACL -917034 sc-eQTL 5.84e-01 -0.0528 0.0962 0.495 B_Activated L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 6.82e-01 0.0338 0.0822 0.495 B_Activated L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 3.36e-01 -0.0913 0.0947 0.498 B_Intermediate L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 9.30e-01 -0.00768 0.0877 0.498 B_Intermediate L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 3.63e-02 0.137 0.0651 0.498 B_Intermediate L2
ENSG00000112378 PERP 4292 sc-eQTL 1.23e-01 -0.129 0.0832 0.498 B_Intermediate L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 9.97e-01 0.000254 0.0657 0.498 B_Intermediate L2
ENSG00000135597 REPS1 -876550 sc-eQTL 1.22e-01 0.137 0.0882 0.498 B_Intermediate L2
ENSG00000146386 ABRACL -917034 sc-eQTL 3.27e-01 -0.0739 0.0753 0.498 B_Intermediate L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 2.65e-02 -0.206 0.0921 0.498 B_Intermediate L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 4.31e-01 0.0775 0.0983 0.496 B_Memory L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 7.03e-01 0.0371 0.0971 0.496 B_Memory L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 1.60e-02 0.177 0.073 0.496 B_Memory L2
ENSG00000112378 PERP 4292 sc-eQTL 7.59e-01 -0.0283 0.0923 0.496 B_Memory L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 5.65e-01 -0.0366 0.0635 0.496 B_Memory L2
ENSG00000135597 REPS1 -876550 sc-eQTL 9.10e-01 -0.0104 0.0923 0.496 B_Memory L2
ENSG00000146386 ABRACL -917034 sc-eQTL 2.36e-02 -0.164 0.0721 0.496 B_Memory L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 1.96e-01 0.122 0.0942 0.496 B_Memory L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 1.84e-01 -0.12 0.0902 0.5 B_Naive1 L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 3.05e-01 0.0768 0.0747 0.5 B_Naive1 L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 1.00e-01 0.105 0.0633 0.5 B_Naive1 L2
ENSG00000112378 PERP 4292 sc-eQTL 5.05e-02 -0.168 0.0856 0.5 B_Naive1 L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 2.08e-01 -0.0631 0.0499 0.5 B_Naive1 L2
ENSG00000135597 REPS1 -876550 sc-eQTL 9.15e-01 0.00781 0.0731 0.5 B_Naive1 L2
ENSG00000146386 ABRACL -917034 sc-eQTL 7.28e-01 0.0178 0.0511 0.5 B_Naive1 L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 6.08e-01 -0.0403 0.0784 0.5 B_Naive1 L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 2.53e-01 -0.101 0.0883 0.498 B_Naive2 L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 6.06e-01 -0.0471 0.0912 0.498 B_Naive2 L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 4.61e-02 0.12 0.06 0.498 B_Naive2 L2
ENSG00000112378 PERP 4292 sc-eQTL 8.73e-01 -0.0116 0.0727 0.498 B_Naive2 L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 8.53e-01 -0.0135 0.0727 0.498 B_Naive2 L2
ENSG00000135597 REPS1 -876550 sc-eQTL 9.25e-01 -0.00753 0.0795 0.498 B_Naive2 L2
ENSG00000146386 ABRACL -917034 sc-eQTL 5.39e-01 -0.036 0.0585 0.498 B_Naive2 L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 8.27e-01 0.0205 0.094 0.498 B_Naive2 L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 4.30e-01 0.0719 0.091 0.498 CD4_CTL L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 1.75e-01 0.116 0.085 0.498 CD4_CTL L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 7.35e-01 0.0267 0.0787 0.498 CD4_CTL L2
ENSG00000112378 PERP 4292 sc-eQTL 2.00e-01 0.123 0.0955 0.498 CD4_CTL L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 1.54e-01 0.0797 0.0557 0.498 CD4_CTL L2
ENSG00000135597 REPS1 -876550 sc-eQTL 3.15e-01 -0.0898 0.0891 0.498 CD4_CTL L2
ENSG00000146386 ABRACL -917034 sc-eQTL 7.89e-01 -0.0219 0.0814 0.498 CD4_CTL L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 8.32e-01 -0.0186 0.0871 0.498 CD4_CTL L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 3.89e-01 -0.0759 0.088 0.5 CD4_Naive L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 7.70e-01 0.0136 0.0466 0.5 CD4_Naive L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 4.67e-02 0.109 0.0544 0.5 CD4_Naive L2
ENSG00000112378 PERP 4292 sc-eQTL 4.18e-02 0.147 0.0719 0.5 CD4_Naive L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 4.03e-01 0.0426 0.0508 0.5 CD4_Naive L2
ENSG00000135597 REPS1 -876550 sc-eQTL 9.74e-01 -0.00199 0.0607 0.5 CD4_Naive L2
ENSG00000146386 ABRACL -917034 sc-eQTL 5.87e-01 0.0222 0.0409 0.5 CD4_Naive L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 6.62e-01 0.0288 0.0659 0.5 CD4_Naive L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 2.20e-01 -0.106 0.0865 0.5 CD4_TCM L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 5.60e-01 0.0381 0.0652 0.5 CD4_TCM L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 2.69e-02 0.142 0.0638 0.5 CD4_TCM L2
ENSG00000112378 PERP 4292 sc-eQTL 3.26e-03 0.236 0.0794 0.5 CD4_TCM L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 5.44e-01 0.0286 0.047 0.5 CD4_TCM L2
ENSG00000135597 REPS1 -876550 sc-eQTL 1.08e-01 0.106 0.0654 0.5 CD4_TCM L2
ENSG00000146386 ABRACL -917034 sc-eQTL 8.52e-01 0.00942 0.0506 0.5 CD4_TCM L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 7.31e-01 -0.0227 0.0659 0.5 CD4_TCM L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 1.18e-01 -0.15 0.0954 0.5 CD4_TEM L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 3.09e-01 0.074 0.0725 0.5 CD4_TEM L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 4.11e-01 0.0538 0.0653 0.5 CD4_TEM L2
ENSG00000112378 PERP 4292 sc-eQTL 7.02e-01 -0.0291 0.076 0.5 CD4_TEM L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 4.23e-01 -0.0387 0.0482 0.5 CD4_TEM L2
ENSG00000135597 REPS1 -876550 sc-eQTL 8.83e-01 0.012 0.0814 0.5 CD4_TEM L2
ENSG00000146386 ABRACL -917034 sc-eQTL 8.68e-01 0.00968 0.058 0.5 CD4_TEM L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 8.78e-01 -0.0119 0.0774 0.5 CD4_TEM L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 3.85e-01 -0.0852 0.0978 0.5 CD8_CTL L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 3.21e-01 -0.0656 0.0659 0.5 CD8_CTL L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 9.16e-02 0.118 0.0695 0.5 CD8_CTL L2
ENSG00000112378 PERP 4292 sc-eQTL 1.40e-01 0.129 0.0869 0.5 CD8_CTL L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 7.32e-01 0.019 0.0556 0.5 CD8_CTL L2
ENSG00000135597 REPS1 -876550 sc-eQTL 3.39e-01 -0.073 0.0763 0.5 CD8_CTL L2
ENSG00000146386 ABRACL -917034 sc-eQTL 5.56e-01 0.0364 0.0618 0.5 CD8_CTL L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 5.67e-01 -0.0447 0.0781 0.5 CD8_CTL L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 9.52e-01 0.00559 0.0931 0.5 CD8_Naive L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 2.22e-01 0.0793 0.0647 0.5 CD8_Naive L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 6.96e-01 0.0232 0.0595 0.5 CD8_Naive L2
ENSG00000112378 PERP 4292 sc-eQTL 2.01e-01 0.0913 0.0712 0.5 CD8_Naive L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 7.85e-01 0.0139 0.0508 0.5 CD8_Naive L2
ENSG00000135597 REPS1 -876550 sc-eQTL 9.25e-01 -0.00678 0.072 0.5 CD8_Naive L2
ENSG00000146386 ABRACL -917034 sc-eQTL 4.43e-01 -0.029 0.0377 0.5 CD8_Naive L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 7.52e-01 -0.0238 0.075 0.5 CD8_Naive L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 6.99e-01 -0.0407 0.105 0.5 CD8_TCM L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 2.46e-01 -0.101 0.0866 0.5 CD8_TCM L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 3.17e-01 0.074 0.0738 0.5 CD8_TCM L2
ENSG00000112378 PERP 4292 sc-eQTL 8.04e-01 0.0243 0.0977 0.5 CD8_TCM L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 3.22e-01 0.0466 0.047 0.5 CD8_TCM L2
ENSG00000135597 REPS1 -876550 sc-eQTL 3.22e-01 -0.0793 0.0798 0.5 CD8_TCM L2
ENSG00000146386 ABRACL -917034 sc-eQTL 8.72e-02 0.136 0.0791 0.5 CD8_TCM L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 7.50e-01 -0.0275 0.0861 0.5 CD8_TCM L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 2.26e-01 0.119 0.0979 0.493 CD8_TEM L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 7.96e-01 -0.022 0.0851 0.493 CD8_TEM L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 3.72e-01 0.0798 0.0892 0.493 CD8_TEM L2
ENSG00000112378 PERP 4292 sc-eQTL 4.20e-01 0.0823 0.102 0.493 CD8_TEM L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 8.37e-01 0.0129 0.0628 0.493 CD8_TEM L2
ENSG00000135597 REPS1 -876550 sc-eQTL 6.26e-01 -0.0467 0.0957 0.493 CD8_TEM L2
ENSG00000146386 ABRACL -917034 sc-eQTL 6.86e-01 -0.0298 0.0738 0.493 CD8_TEM L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 2.13e-01 0.116 0.0928 0.493 CD8_TEM L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 9.92e-01 -0.00102 0.104 0.5 MAIT L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 1.99e-01 0.0867 0.0673 0.5 MAIT L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 1.15e-02 0.181 0.0711 0.5 MAIT L2
ENSG00000112378 PERP 4292 sc-eQTL 6.28e-01 -0.0464 0.0955 0.5 MAIT L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 6.08e-01 -0.0233 0.0454 0.5 MAIT L2
ENSG00000135597 REPS1 -876550 sc-eQTL 7.22e-01 0.0304 0.0852 0.5 MAIT L2
ENSG00000146386 ABRACL -917034 sc-eQTL 6.55e-01 0.0281 0.0626 0.5 MAIT L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 2.48e-01 0.097 0.0838 0.5 MAIT L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 8.85e-03 -0.253 0.0958 0.496 NK_CD56bright L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 2.74e-01 -0.0833 0.0758 0.496 NK_CD56bright L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 7.96e-01 -0.0215 0.083 0.496 NK_CD56bright L2
ENSG00000112378 PERP 4292 sc-eQTL 5.52e-02 -0.17 0.088 0.496 NK_CD56bright L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 3.30e-01 0.0551 0.0565 0.496 NK_CD56bright L2
ENSG00000135597 REPS1 -876550 sc-eQTL 3.35e-01 0.0794 0.0822 0.496 NK_CD56bright L2
ENSG00000146386 ABRACL -917034 sc-eQTL 6.43e-01 -0.0353 0.0759 0.496 NK_CD56bright L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 4.08e-01 -0.0748 0.0901 0.496 NK_CD56bright L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 8.14e-01 0.0204 0.0864 0.5 NK_CD56dim L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 9.59e-01 0.00289 0.0568 0.5 NK_CD56dim L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 9.99e-02 0.126 0.0762 0.5 NK_CD56dim L2
ENSG00000112378 PERP 4292 sc-eQTL 1.92e-01 0.0898 0.0685 0.5 NK_CD56dim L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 6.65e-01 -0.0232 0.0535 0.5 NK_CD56dim L2
ENSG00000135597 REPS1 -876550 sc-eQTL 6.53e-01 -0.0317 0.0705 0.5 NK_CD56dim L2
ENSG00000146386 ABRACL -917034 sc-eQTL 1.86e-01 -0.063 0.0475 0.5 NK_CD56dim L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 4.86e-01 0.0558 0.08 0.5 NK_CD56dim L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 2.91e-01 0.108 0.102 0.491 NK_HLA L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 7.74e-01 0.0215 0.075 0.491 NK_HLA L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 2.14e-01 0.108 0.0866 0.491 NK_HLA L2
ENSG00000112378 PERP 4292 sc-eQTL 6.35e-01 0.0367 0.0773 0.491 NK_HLA L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 5.98e-01 -0.0314 0.0594 0.491 NK_HLA L2
ENSG00000135597 REPS1 -876550 sc-eQTL 8.87e-01 -0.0134 0.0942 0.491 NK_HLA L2
ENSG00000146386 ABRACL -917034 sc-eQTL 2.05e-01 -0.0981 0.0772 0.491 NK_HLA L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 4.53e-01 0.0719 0.0957 0.491 NK_HLA L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 9.72e-01 0.00317 0.0907 0.5 NK_cytokine L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 6.53e-01 -0.0275 0.0611 0.5 NK_cytokine L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 3.26e-01 0.0768 0.078 0.5 NK_cytokine L2
ENSG00000112378 PERP 4292 sc-eQTL 5.46e-01 0.044 0.0728 0.5 NK_cytokine L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 7.03e-01 -0.0209 0.0546 0.5 NK_cytokine L2
ENSG00000135597 REPS1 -876550 sc-eQTL 8.58e-01 0.0144 0.0807 0.5 NK_cytokine L2
ENSG00000146386 ABRACL -917034 sc-eQTL 5.35e-01 -0.0323 0.0519 0.5 NK_cytokine L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 6.87e-01 -0.0332 0.0822 0.5 NK_cytokine L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 5.63e-01 -0.0673 0.116 0.47 PB L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 4.95e-01 -0.0838 0.122 0.47 PB L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 4.01e-01 0.0867 0.103 0.47 PB L2
ENSG00000112378 PERP 4292 sc-eQTL 1.75e-01 0.106 0.078 0.47 PB L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 8.83e-01 0.0141 0.0954 0.47 PB L2
ENSG00000135597 REPS1 -876550 sc-eQTL 3.82e-01 -0.0982 0.112 0.47 PB L2
ENSG00000146386 ABRACL -917034 sc-eQTL 3.02e-01 -0.0811 0.0782 0.47 PB L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 9.14e-01 -0.0124 0.115 0.47 PB L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 7.92e-01 0.026 0.0983 0.502 Pro_T L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 8.00e-01 0.0191 0.075 0.502 Pro_T L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 5.27e-01 0.0497 0.0783 0.502 Pro_T L2
ENSG00000112378 PERP 4292 sc-eQTL 5.69e-01 -0.0413 0.0724 0.502 Pro_T L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 2.74e-01 -0.05 0.0456 0.502 Pro_T L2
ENSG00000135597 REPS1 -876550 sc-eQTL 1.12e-01 0.145 0.0907 0.502 Pro_T L2
ENSG00000146386 ABRACL -917034 sc-eQTL 3.44e-01 -0.0557 0.0587 0.502 Pro_T L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 6.76e-01 0.0371 0.0886 0.502 Pro_T L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 8.82e-02 -0.159 0.0929 0.5 Treg L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 6.09e-01 0.0451 0.088 0.5 Treg L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 1.22e-01 0.0988 0.0636 0.5 Treg L2
ENSG00000112378 PERP 4292 sc-eQTL 2.18e-01 0.124 0.1 0.5 Treg L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 4.75e-01 -0.04 0.0559 0.5 Treg L2
ENSG00000135597 REPS1 -876550 sc-eQTL 4.10e-01 -0.0663 0.0803 0.5 Treg L2
ENSG00000146386 ABRACL -917034 sc-eQTL 9.13e-01 -0.00746 0.0685 0.5 Treg L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 9.52e-01 -0.0051 0.0854 0.5 Treg L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 1.72e-02 0.218 0.0908 0.49 cDC L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 8.56e-01 0.0136 0.0751 0.49 cDC L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 8.69e-01 0.0109 0.0661 0.49 cDC L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 8.67e-01 -0.0124 0.0741 0.49 cDC L2
ENSG00000135540 NHSL1 -580860 sc-eQTL 1.72e-01 0.117 0.0854 0.49 cDC L2
ENSG00000135597 REPS1 -876550 sc-eQTL 8.30e-01 0.0212 0.0989 0.49 cDC L2
ENSG00000146386 ABRACL -917034 sc-eQTL 3.11e-01 -0.0819 0.0807 0.49 cDC L2
ENSG00000225177 AL590617.2 -580837 sc-eQTL 4.81e-01 0.0668 0.0946 0.49 cDC L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 1.79e-01 0.13 0.096 0.49 cDC L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 4.47e-01 -0.0547 0.0718 0.5 cMono_IL1B L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 5.28e-01 0.0331 0.0524 0.5 cMono_IL1B L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 1.24e-01 0.0793 0.0514 0.5 cMono_IL1B L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 3.28e-01 -0.0552 0.0563 0.5 cMono_IL1B L2
ENSG00000135540 NHSL1 -580860 sc-eQTL 3.64e-01 0.0786 0.0864 0.5 cMono_IL1B L2
ENSG00000135597 REPS1 -876550 sc-eQTL 5.53e-01 0.0459 0.0772 0.5 cMono_IL1B L2
ENSG00000146386 ABRACL -917034 sc-eQTL 2.62e-01 -0.0728 0.0648 0.5 cMono_IL1B L2
ENSG00000225177 AL590617.2 -580837 sc-eQTL 6.07e-01 0.0467 0.0906 0.5 cMono_IL1B L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 4.10e-01 -0.0497 0.0602 0.5 cMono_IL1B L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 3.35e-01 0.0798 0.0825 0.5 cMono_S100A L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 2.54e-01 0.0693 0.0606 0.5 cMono_S100A L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 8.71e-02 0.0966 0.0562 0.5 cMono_S100A L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 5.06e-01 -0.0359 0.054 0.5 cMono_S100A L2
ENSG00000135540 NHSL1 -580860 sc-eQTL 3.86e-01 -0.0769 0.0885 0.5 cMono_S100A L2
ENSG00000135597 REPS1 -876550 sc-eQTL 2.87e-01 -0.0892 0.0836 0.5 cMono_S100A L2
ENSG00000146386 ABRACL -917034 sc-eQTL 2.10e-01 -0.0914 0.0726 0.5 cMono_S100A L2
ENSG00000225177 AL590617.2 -580837 sc-eQTL 4.74e-01 0.0696 0.097 0.5 cMono_S100A L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 2.23e-01 -0.0944 0.0773 0.5 cMono_S100A L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 2.25e-01 0.14 0.115 0.509 gdT L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 2.88e-01 0.0979 0.0918 0.509 gdT L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 7.80e-01 -0.0307 0.11 0.509 gdT L2
ENSG00000112378 PERP 4292 sc-eQTL 8.17e-01 -0.0236 0.102 0.509 gdT L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 4.32e-01 -0.0446 0.0566 0.509 gdT L2
ENSG00000135597 REPS1 -876550 sc-eQTL 6.22e-01 -0.0558 0.113 0.509 gdT L2
ENSG00000146386 ABRACL -917034 sc-eQTL 1.16e-01 -0.133 0.0844 0.509 gdT L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 2.92e-01 -0.108 0.102 0.509 gdT L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 4.23e-02 -0.192 0.0941 0.493 intMono L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 8.86e-02 0.109 0.0636 0.493 intMono L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 8.27e-01 0.014 0.0638 0.493 intMono L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 1.45e-01 -0.0805 0.055 0.493 intMono L2
ENSG00000135540 NHSL1 -580860 sc-eQTL 3.28e-01 -0.0841 0.0859 0.493 intMono L2
ENSG00000135597 REPS1 -876550 sc-eQTL 5.02e-01 -0.0597 0.0888 0.493 intMono L2
ENSG00000146386 ABRACL -917034 sc-eQTL 1.45e-02 -0.197 0.0799 0.493 intMono L2
ENSG00000225177 AL590617.2 -580837 sc-eQTL 8.27e-01 0.0212 0.0965 0.493 intMono L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 4.64e-01 -0.0604 0.0823 0.493 intMono L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 7.76e-01 -0.0256 0.0896 0.5 ncMono L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 4.53e-01 0.0573 0.0762 0.5 ncMono L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 6.32e-01 0.0256 0.0534 0.5 ncMono L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 9.51e-01 0.00412 0.0675 0.5 ncMono L2
ENSG00000135540 NHSL1 -580860 sc-eQTL 7.00e-01 0.0333 0.0861 0.5 ncMono L2
ENSG00000135597 REPS1 -876550 sc-eQTL 1.65e-01 0.0899 0.0646 0.5 ncMono L2
ENSG00000146386 ABRACL -917034 sc-eQTL 4.97e-01 -0.0532 0.0781 0.5 ncMono L2
ENSG00000225177 AL590617.2 -580837 sc-eQTL 2.85e-02 0.208 0.0945 0.5 ncMono L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 5.32e-01 0.0528 0.0844 0.5 ncMono L2
ENSG00000024862 CCDC28A -661798 sc-eQTL 7.75e-01 -0.0302 0.105 0.497 pDC L2
ENSG00000027697 IFNGR1 892262 sc-eQTL 9.52e-01 0.00535 0.0895 0.497 pDC L2
ENSG00000051620 HEBP2 -291820 sc-eQTL 8.36e-01 0.0171 0.082 0.497 pDC L2
ENSG00000118503 TNFAIP3 244497 sc-eQTL 3.17e-01 -0.0831 0.0827 0.497 pDC L2
ENSG00000135540 NHSL1 -580860 sc-eQTL 9.78e-01 -0.00227 0.0817 0.497 pDC L2
ENSG00000135597 REPS1 -876550 sc-eQTL 9.41e-01 0.00611 0.0827 0.497 pDC L2
ENSG00000146386 ABRACL -917034 sc-eQTL 8.73e-01 0.0145 0.0904 0.497 pDC L2
ENSG00000225177 AL590617.2 -580837 sc-eQTL 7.88e-01 0.0221 0.082 0.497 pDC L2
ENSG00000237499 WAKMAR2 243478 sc-eQTL 9.01e-01 -0.0105 0.0842 0.497 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -661798 sc-eQTL 6.81e-01 -0.037 0.09 0.5 B_Memory LOneK1K
ENSG00000027697 IFNGR1 892262 sc-eQTL 6.78e-01 0.0319 0.0768 0.5 B_Memory LOneK1K
ENSG00000051620 HEBP2 -291820 sc-eQTL 4.27e-02 0.126 0.0617 0.5 B_Memory LOneK1K
ENSG00000112378 PERP 4292 sc-eQTL 6.23e-01 -0.0404 0.0821 0.5 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 244497 sc-eQTL 3.47e-01 0.051 0.0541 0.5 B_Memory LOneK1K
ENSG00000135597 REPS1 -876550 sc-eQTL 2.80e-01 0.0896 0.0828 0.5 B_Memory LOneK1K
ENSG00000146386 ABRACL -917034 sc-eQTL 2.35e-02 -0.13 0.0568 0.5 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 243478 sc-eQTL 4.69e-01 -0.0664 0.0916 0.5 B_Memory LOneK1K
ENSG00000024862 CCDC28A -661798 sc-eQTL 1.10e-01 -0.134 0.0833 0.5 B_Naive LOneK1K
ENSG00000027697 IFNGR1 892262 sc-eQTL 6.05e-01 0.0405 0.0782 0.5 B_Naive LOneK1K
ENSG00000051620 HEBP2 -291820 sc-eQTL 1.48e-01 0.0839 0.0578 0.5 B_Naive LOneK1K
ENSG00000112378 PERP 4292 sc-eQTL 7.28e-02 -0.153 0.0847 0.5 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 244497 sc-eQTL 5.22e-01 -0.0287 0.0448 0.5 B_Naive LOneK1K
ENSG00000135597 REPS1 -876550 sc-eQTL 6.56e-01 0.0298 0.0667 0.5 B_Naive LOneK1K
ENSG00000146386 ABRACL -917034 sc-eQTL 5.55e-01 0.0277 0.0468 0.5 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 243478 sc-eQTL 5.96e-01 -0.0424 0.0798 0.5 B_Naive LOneK1K
ENSG00000024862 CCDC28A -661798 sc-eQTL 8.92e-01 -0.00897 0.0662 0.5 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 892262 sc-eQTL 3.82e-01 0.0461 0.0526 0.5 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -291820 sc-eQTL 5.76e-02 0.0933 0.0489 0.5 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 244497 sc-eQTL 4.42e-01 -0.0374 0.0487 0.5 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -580860 sc-eQTL 7.55e-01 0.0271 0.0867 0.5 CD14_Mono LOneK1K
ENSG00000135597 REPS1 -876550 sc-eQTL 7.89e-01 0.0192 0.0714 0.5 CD14_Mono LOneK1K
ENSG00000146386 ABRACL -917034 sc-eQTL 2.40e-01 -0.0746 0.0633 0.5 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -580837 sc-eQTL 3.42e-01 0.0885 0.0929 0.5 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 243478 sc-eQTL 3.71e-01 -0.0523 0.0583 0.5 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A -661798 sc-eQTL 2.54e-01 -0.101 0.0884 0.5 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 892262 sc-eQTL 1.83e-01 0.0826 0.0618 0.5 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -291820 sc-eQTL 8.12e-01 0.0113 0.0474 0.5 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 244497 sc-eQTL 5.27e-01 -0.0367 0.0579 0.5 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -580860 sc-eQTL 8.69e-01 -0.0139 0.0842 0.5 CD16_Mono LOneK1K
ENSG00000135597 REPS1 -876550 sc-eQTL 9.60e-01 -0.0026 0.0524 0.5 CD16_Mono LOneK1K
ENSG00000146386 ABRACL -917034 sc-eQTL 3.12e-02 -0.165 0.0759 0.5 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -580837 sc-eQTL 1.99e-01 0.119 0.0927 0.5 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 243478 sc-eQTL 8.53e-01 0.0144 0.0777 0.5 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A -661798 sc-eQTL 6.47e-01 0.0382 0.0834 0.5 NK_CD56dim LOneK1K
ENSG00000027697 IFNGR1 892262 sc-eQTL 5.10e-01 -0.0385 0.0583 0.5 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -291820 sc-eQTL 7.67e-02 0.128 0.0718 0.5 NK_CD56dim LOneK1K
ENSG00000112378 PERP 4292 sc-eQTL 7.95e-01 0.0159 0.061 0.5 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 244497 sc-eQTL 9.30e-01 -0.00471 0.0532 0.5 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 -876550 sc-eQTL 5.80e-01 -0.0386 0.0695 0.5 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL -917034 sc-eQTL 2.12e-01 -0.056 0.0447 0.5 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 243478 sc-eQTL 8.97e-01 0.00961 0.0744 0.5 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112378 PERP 4292 eQTL 0.000885 0.0834 0.025 0.00703 0.00444 0.476
ENSG00000135597 REPS1 -876550 eQTL 0.00451 0.0449 0.0158 0.00185 0.0 0.476

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000027697 \N 892262 5.85e-07 2.67e-07 5.82e-08 4.04e-07 1.01e-07 1.57e-07 3.57e-07 6.72e-08 1.98e-07 6.08e-08 2.18e-07 1.08e-07 3.18e-07 8.07e-08 8.45e-08 7.89e-08 6.17e-08 2.33e-07 7.53e-08 1.76e-07 1.23e-07 1.89e-07 2.56e-07 4.37e-08 2.36e-07 1.31e-07 1.29e-07 1.52e-07 1.36e-07 1.59e-07 1.39e-07 5.32e-08 5.17e-08 1.23e-07 3.3e-07 3.11e-08 1.64e-07 7.61e-08 5.8e-08 7.53e-08 6.31e-08 2.15e-07 5.22e-08 1.19e-08 2.64e-08 8.76e-09 7.83e-08 3.79e-09 5e-08
ENSG00000112378 PERP 4292 6.33e-05 4.22e-05 7.01e-06 1.59e-05 6.28e-06 1.81e-05 5.58e-05 4.24e-06 3.47e-05 1.45e-05 4.51e-05 1.87e-05 5.64e-05 1.66e-05 7.23e-06 2.14e-05 2.12e-05 2.99e-05 8.6e-06 6.6e-06 1.82e-05 3.78e-05 4.04e-05 9.09e-06 4.91e-05 8.34e-06 1.51e-05 1.28e-05 4.16e-05 3.14e-05 2.32e-05 1.62e-06 2.38e-06 6.69e-06 1.26e-05 5.68e-06 2.82e-06 3.11e-06 4.13e-06 3.04e-06 1.67e-06 5.17e-05 4.93e-06 2.69e-07 2.75e-06 3.9e-06 4.11e-06 1.47e-06 1.52e-06