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Genes within 1Mb (chr6:138104934:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -668575 sc-eQTL 2.54e-01 -0.0863 0.0754 0.498 B L1
ENSG00000027697 IFNGR1 885485 sc-eQTL 3.39e-01 0.0703 0.0735 0.498 B L1
ENSG00000051620 HEBP2 -298597 sc-eQTL 9.97e-02 0.0949 0.0574 0.498 B L1
ENSG00000112378 PERP -2485 sc-eQTL 3.18e-01 -0.0575 0.0575 0.498 B L1
ENSG00000118503 TNFAIP3 237720 sc-eQTL 9.16e-01 -0.00489 0.0465 0.498 B L1
ENSG00000135597 REPS1 -883327 sc-eQTL 2.89e-01 0.0689 0.0649 0.498 B L1
ENSG00000146386 ABRACL -923811 sc-eQTL 6.14e-01 -0.0193 0.0382 0.498 B L1
ENSG00000237499 WAKMAR2 236701 sc-eQTL 6.40e-01 -0.0342 0.0731 0.498 B L1
ENSG00000024862 CCDC28A -668575 sc-eQTL 2.82e-01 -0.0901 0.0836 0.498 CD4T L1
ENSG00000027697 IFNGR1 885485 sc-eQTL 4.85e-01 0.0343 0.049 0.498 CD4T L1
ENSG00000051620 HEBP2 -298597 sc-eQTL 4.99e-02 0.11 0.0558 0.498 CD4T L1
ENSG00000112378 PERP -2485 sc-eQTL 7.03e-03 0.142 0.0522 0.498 CD4T L1
ENSG00000118503 TNFAIP3 237720 sc-eQTL 4.74e-01 0.0356 0.0497 0.498 CD4T L1
ENSG00000135597 REPS1 -883327 sc-eQTL 6.08e-01 0.0282 0.0549 0.498 CD4T L1
ENSG00000146386 ABRACL -923811 sc-eQTL 7.16e-01 0.0147 0.0403 0.498 CD4T L1
ENSG00000237499 WAKMAR2 236701 sc-eQTL 9.99e-01 0.000114 0.0626 0.498 CD4T L1
ENSG00000024862 CCDC28A -668575 sc-eQTL 7.38e-01 0.0306 0.0913 0.498 CD8T L1
ENSG00000027697 IFNGR1 885485 sc-eQTL 6.81e-01 -0.023 0.0559 0.498 CD8T L1
ENSG00000051620 HEBP2 -298597 sc-eQTL 7.20e-02 0.107 0.0594 0.498 CD8T L1
ENSG00000112378 PERP -2485 sc-eQTL 1.46e-01 0.0886 0.0606 0.498 CD8T L1
ENSG00000118503 TNFAIP3 237720 sc-eQTL 7.35e-01 0.016 0.047 0.498 CD8T L1
ENSG00000135597 REPS1 -883327 sc-eQTL 5.94e-01 -0.0328 0.0615 0.498 CD8T L1
ENSG00000146386 ABRACL -923811 sc-eQTL 8.19e-01 -0.00802 0.035 0.498 CD8T L1
ENSG00000237499 WAKMAR2 236701 sc-eQTL 8.39e-01 0.014 0.0691 0.498 CD8T L1
ENSG00000024862 CCDC28A -668575 sc-eQTL 2.51e-01 0.107 0.0927 0.495 DC L1
ENSG00000027697 IFNGR1 885485 sc-eQTL 3.84e-01 0.06 0.0689 0.495 DC L1
ENSG00000051620 HEBP2 -298597 sc-eQTL 9.99e-01 -6.23e-05 0.0654 0.495 DC L1
ENSG00000118503 TNFAIP3 237720 sc-eQTL 9.24e-01 -0.00708 0.0738 0.495 DC L1
ENSG00000135540 NHSL1 -587637 sc-eQTL 2.28e-01 0.103 0.085 0.495 DC L1
ENSG00000135597 REPS1 -883327 sc-eQTL 9.47e-01 -0.00505 0.0754 0.495 DC L1
ENSG00000146386 ABRACL -923811 sc-eQTL 5.77e-01 -0.0412 0.0738 0.495 DC L1
ENSG00000225177 AL590617.2 -587614 sc-eQTL 3.66e-01 0.0806 0.089 0.495 DC L1
ENSG00000237499 WAKMAR2 236701 sc-eQTL 9.72e-01 0.00264 0.0752 0.495 DC L1
ENSG00000024862 CCDC28A -668575 sc-eQTL 2.28e-01 -0.0797 0.066 0.498 Mono L1
ENSG00000027697 IFNGR1 885485 sc-eQTL 2.08e-01 0.071 0.0562 0.498 Mono L1
ENSG00000051620 HEBP2 -298597 sc-eQTL 1.76e-01 0.0619 0.0456 0.498 Mono L1
ENSG00000118503 TNFAIP3 237720 sc-eQTL 7.51e-01 -0.0152 0.0479 0.498 Mono L1
ENSG00000135540 NHSL1 -587637 sc-eQTL 7.12e-01 0.032 0.0865 0.498 Mono L1
ENSG00000135597 REPS1 -883327 sc-eQTL 8.48e-01 0.00973 0.0507 0.498 Mono L1
ENSG00000146386 ABRACL -923811 sc-eQTL 2.04e-01 -0.0836 0.0657 0.498 Mono L1
ENSG00000225177 AL590617.2 -587614 sc-eQTL 2.47e-01 0.104 0.0897 0.498 Mono L1
ENSG00000237499 WAKMAR2 236701 sc-eQTL 6.27e-01 -0.0289 0.0593 0.498 Mono L1
ENSG00000024862 CCDC28A -668575 sc-eQTL 6.65e-01 -0.035 0.0805 0.498 NK L1
ENSG00000027697 IFNGR1 885485 sc-eQTL 4.29e-01 -0.0491 0.0619 0.498 NK L1
ENSG00000051620 HEBP2 -298597 sc-eQTL 2.88e-01 0.0755 0.0708 0.498 NK L1
ENSG00000112378 PERP -2485 sc-eQTL 9.17e-01 -0.00629 0.0603 0.498 NK L1
ENSG00000118503 TNFAIP3 237720 sc-eQTL 9.73e-01 -0.00174 0.0516 0.498 NK L1
ENSG00000135597 REPS1 -883327 sc-eQTL 9.28e-01 -0.006 0.0663 0.498 NK L1
ENSG00000146386 ABRACL -923811 sc-eQTL 3.47e-01 -0.0455 0.0483 0.498 NK L1
ENSG00000237499 WAKMAR2 236701 sc-eQTL 9.52e-01 0.00444 0.0731 0.498 NK L1
ENSG00000024862 CCDC28A -668575 sc-eQTL 8.27e-01 0.0208 0.0952 0.498 Other_T L1
ENSG00000027697 IFNGR1 885485 sc-eQTL 5.12e-01 0.0381 0.0579 0.498 Other_T L1
ENSG00000051620 HEBP2 -298597 sc-eQTL 1.26e-01 0.0938 0.0611 0.498 Other_T L1
ENSG00000112378 PERP -2485 sc-eQTL 3.21e-01 -0.0754 0.0757 0.498 Other_T L1
ENSG00000118503 TNFAIP3 237720 sc-eQTL 7.42e-01 -0.0119 0.0361 0.498 Other_T L1
ENSG00000135597 REPS1 -883327 sc-eQTL 2.38e-01 0.0874 0.0739 0.498 Other_T L1
ENSG00000146386 ABRACL -923811 sc-eQTL 5.11e-02 -0.0944 0.0481 0.498 Other_T L1
ENSG00000237499 WAKMAR2 236701 sc-eQTL 6.44e-01 -0.0331 0.0716 0.498 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -668575 sc-eQTL 9.67e-01 0.00445 0.107 0.492 B_Activated L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 6.47e-01 0.0438 0.0955 0.492 B_Activated L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 5.79e-01 0.052 0.0936 0.492 B_Activated L2
ENSG00000112378 PERP -2485 sc-eQTL 3.47e-01 0.0457 0.0485 0.492 B_Activated L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 4.98e-01 -0.0639 0.0942 0.492 B_Activated L2
ENSG00000135597 REPS1 -883327 sc-eQTL 9.69e-01 -0.00416 0.107 0.492 B_Activated L2
ENSG00000146386 ABRACL -923811 sc-eQTL 5.29e-01 -0.0608 0.0963 0.492 B_Activated L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 6.56e-01 0.0367 0.0823 0.492 B_Activated L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 3.67e-01 -0.0858 0.0949 0.496 B_Intermediate L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 9.33e-01 -0.0074 0.0879 0.496 B_Intermediate L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 4.40e-02 0.132 0.0652 0.496 B_Intermediate L2
ENSG00000112378 PERP -2485 sc-eQTL 1.64e-01 -0.116 0.0835 0.496 B_Intermediate L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 9.75e-01 -0.00209 0.0658 0.496 B_Intermediate L2
ENSG00000135597 REPS1 -883327 sc-eQTL 1.39e-01 0.131 0.0884 0.496 B_Intermediate L2
ENSG00000146386 ABRACL -923811 sc-eQTL 3.17e-01 -0.0756 0.0755 0.496 B_Intermediate L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 2.46e-02 -0.209 0.0922 0.496 B_Intermediate L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 5.10e-01 0.065 0.0986 0.494 B_Memory L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 6.94e-01 0.0384 0.0974 0.494 B_Memory L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 1.35e-02 0.182 0.0732 0.494 B_Memory L2
ENSG00000112378 PERP -2485 sc-eQTL 7.76e-01 -0.0263 0.0926 0.494 B_Memory L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 6.56e-01 -0.0284 0.0637 0.494 B_Memory L2
ENSG00000135597 REPS1 -883327 sc-eQTL 9.97e-01 0.000346 0.0925 0.494 B_Memory L2
ENSG00000146386 ABRACL -923811 sc-eQTL 1.82e-02 -0.172 0.0722 0.494 B_Memory L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 2.26e-01 0.115 0.0945 0.494 B_Memory L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 1.72e-01 -0.124 0.0903 0.498 B_Naive1 L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 2.93e-01 0.0787 0.0747 0.498 B_Naive1 L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 1.33e-01 0.0956 0.0634 0.498 B_Naive1 L2
ENSG00000112378 PERP -2485 sc-eQTL 4.13e-02 -0.176 0.0856 0.498 B_Naive1 L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 2.14e-01 -0.0622 0.0499 0.498 B_Naive1 L2
ENSG00000135597 REPS1 -883327 sc-eQTL 8.27e-01 0.016 0.0731 0.498 B_Naive1 L2
ENSG00000146386 ABRACL -923811 sc-eQTL 7.44e-01 0.0167 0.0511 0.498 B_Naive1 L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 7.07e-01 -0.0295 0.0785 0.498 B_Naive1 L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 2.27e-01 -0.107 0.0883 0.496 B_Naive2 L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 6.72e-01 -0.0388 0.0913 0.496 B_Naive2 L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 5.91e-02 0.114 0.0601 0.496 B_Naive2 L2
ENSG00000112378 PERP -2485 sc-eQTL 8.85e-01 -0.0105 0.0728 0.496 B_Naive2 L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 8.57e-01 -0.0131 0.0727 0.496 B_Naive2 L2
ENSG00000135597 REPS1 -883327 sc-eQTL 9.26e-01 -0.00744 0.0796 0.496 B_Naive2 L2
ENSG00000146386 ABRACL -923811 sc-eQTL 5.14e-01 -0.0382 0.0585 0.496 B_Naive2 L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 7.94e-01 0.0245 0.094 0.496 B_Naive2 L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 4.57e-01 0.0679 0.0911 0.495 CD4_CTL L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 1.74e-01 0.116 0.085 0.495 CD4_CTL L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 7.08e-01 0.0296 0.0788 0.495 CD4_CTL L2
ENSG00000112378 PERP -2485 sc-eQTL 2.13e-01 0.119 0.0957 0.495 CD4_CTL L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 1.54e-01 0.0798 0.0557 0.495 CD4_CTL L2
ENSG00000135597 REPS1 -883327 sc-eQTL 2.92e-01 -0.0942 0.0892 0.495 CD4_CTL L2
ENSG00000146386 ABRACL -923811 sc-eQTL 7.72e-01 -0.0236 0.0815 0.495 CD4_CTL L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 7.68e-01 -0.0258 0.0872 0.495 CD4_CTL L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 3.47e-01 -0.0829 0.088 0.498 CD4_Naive L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 7.09e-01 0.0174 0.0466 0.498 CD4_Naive L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 5.37e-02 0.106 0.0545 0.498 CD4_Naive L2
ENSG00000112378 PERP -2485 sc-eQTL 4.70e-02 0.144 0.0719 0.498 CD4_Naive L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 4.24e-01 0.0408 0.0509 0.498 CD4_Naive L2
ENSG00000135597 REPS1 -883327 sc-eQTL 9.23e-01 -0.00588 0.0608 0.498 CD4_Naive L2
ENSG00000146386 ABRACL -923811 sc-eQTL 6.30e-01 0.0197 0.0409 0.498 CD4_Naive L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 6.77e-01 0.0275 0.066 0.498 CD4_Naive L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 1.94e-01 -0.113 0.0866 0.498 CD4_TCM L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 5.85e-01 0.0357 0.0653 0.498 CD4_TCM L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 3.33e-02 0.137 0.064 0.498 CD4_TCM L2
ENSG00000112378 PERP -2485 sc-eQTL 4.28e-03 0.23 0.0796 0.498 CD4_TCM L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 5.59e-01 0.0275 0.0471 0.498 CD4_TCM L2
ENSG00000135597 REPS1 -883327 sc-eQTL 1.24e-01 0.101 0.0655 0.498 CD4_TCM L2
ENSG00000146386 ABRACL -923811 sc-eQTL 8.93e-01 0.00681 0.0507 0.498 CD4_TCM L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 7.43e-01 -0.0217 0.066 0.498 CD4_TCM L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 1.05e-01 -0.156 0.0954 0.498 CD4_TEM L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 2.99e-01 0.0755 0.0725 0.498 CD4_TEM L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 3.97e-01 0.0554 0.0653 0.498 CD4_TEM L2
ENSG00000112378 PERP -2485 sc-eQTL 6.77e-01 -0.0317 0.076 0.498 CD4_TEM L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 3.74e-01 -0.0429 0.0482 0.498 CD4_TEM L2
ENSG00000135597 REPS1 -883327 sc-eQTL 8.93e-01 0.011 0.0814 0.498 CD4_TEM L2
ENSG00000146386 ABRACL -923811 sc-eQTL 9.46e-01 0.00391 0.058 0.498 CD4_TEM L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 8.66e-01 -0.0131 0.0774 0.498 CD4_TEM L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 3.73e-01 -0.0874 0.0978 0.498 CD8_CTL L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 3.27e-01 -0.0647 0.0659 0.498 CD8_CTL L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 9.45e-02 0.117 0.0696 0.498 CD8_CTL L2
ENSG00000112378 PERP -2485 sc-eQTL 1.44e-01 0.128 0.0869 0.498 CD8_CTL L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 8.01e-01 0.014 0.0556 0.498 CD8_CTL L2
ENSG00000135597 REPS1 -883327 sc-eQTL 3.16e-01 -0.0767 0.0763 0.498 CD8_CTL L2
ENSG00000146386 ABRACL -923811 sc-eQTL 6.47e-01 0.0283 0.0618 0.498 CD8_CTL L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 4.81e-01 -0.055 0.0781 0.498 CD8_CTL L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 9.37e-01 0.00735 0.0931 0.498 CD8_Naive L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 2.36e-01 0.0768 0.0647 0.498 CD8_Naive L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 7.07e-01 0.0224 0.0595 0.498 CD8_Naive L2
ENSG00000112378 PERP -2485 sc-eQTL 1.61e-01 0.1 0.0712 0.498 CD8_Naive L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 8.25e-01 0.0112 0.0508 0.498 CD8_Naive L2
ENSG00000135597 REPS1 -883327 sc-eQTL 8.51e-01 -0.0135 0.072 0.498 CD8_Naive L2
ENSG00000146386 ABRACL -923811 sc-eQTL 4.09e-01 -0.0312 0.0377 0.498 CD8_Naive L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 7.77e-01 -0.0213 0.0751 0.498 CD8_Naive L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 6.54e-01 -0.0473 0.105 0.498 CD8_TCM L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 2.17e-01 -0.107 0.0866 0.498 CD8_TCM L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 3.18e-01 0.0739 0.0738 0.498 CD8_TCM L2
ENSG00000112378 PERP -2485 sc-eQTL 7.15e-01 0.0357 0.0977 0.498 CD8_TCM L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 3.34e-01 0.0455 0.047 0.498 CD8_TCM L2
ENSG00000135597 REPS1 -883327 sc-eQTL 3.18e-01 -0.08 0.0799 0.498 CD8_TCM L2
ENSG00000146386 ABRACL -923811 sc-eQTL 1.13e-01 0.126 0.0793 0.498 CD8_TCM L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 7.21e-01 -0.0308 0.0862 0.498 CD8_TCM L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 2.20e-01 0.12 0.098 0.491 CD8_TEM L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 8.04e-01 -0.0212 0.0852 0.491 CD8_TEM L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 4.01e-01 0.0752 0.0893 0.491 CD8_TEM L2
ENSG00000112378 PERP -2485 sc-eQTL 4.17e-01 0.0828 0.102 0.491 CD8_TEM L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 9.56e-01 0.00348 0.0628 0.491 CD8_TEM L2
ENSG00000135597 REPS1 -883327 sc-eQTL 5.46e-01 -0.058 0.0958 0.491 CD8_TEM L2
ENSG00000146386 ABRACL -923811 sc-eQTL 6.39e-01 -0.0347 0.0738 0.491 CD8_TEM L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 1.91e-01 0.122 0.0928 0.491 CD8_TEM L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 9.44e-01 -0.0073 0.104 0.498 MAIT L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 2.26e-01 0.0819 0.0674 0.498 MAIT L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 9.93e-03 0.185 0.0711 0.498 MAIT L2
ENSG00000112378 PERP -2485 sc-eQTL 7.23e-01 -0.0339 0.0956 0.498 MAIT L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 5.74e-01 -0.0256 0.0455 0.498 MAIT L2
ENSG00000135597 REPS1 -883327 sc-eQTL 7.28e-01 0.0297 0.0853 0.498 MAIT L2
ENSG00000146386 ABRACL -923811 sc-eQTL 7.29e-01 0.0218 0.0627 0.498 MAIT L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 2.61e-01 0.0945 0.0839 0.498 MAIT L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 1.13e-02 -0.245 0.0959 0.493 NK_CD56bright L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 2.25e-01 -0.0923 0.0758 0.493 NK_CD56bright L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 7.97e-01 -0.0214 0.083 0.493 NK_CD56bright L2
ENSG00000112378 PERP -2485 sc-eQTL 5.09e-02 -0.173 0.088 0.493 NK_CD56bright L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 4.33e-01 0.0444 0.0565 0.493 NK_CD56bright L2
ENSG00000135597 REPS1 -883327 sc-eQTL 3.63e-01 0.075 0.0822 0.493 NK_CD56bright L2
ENSG00000146386 ABRACL -923811 sc-eQTL 5.71e-01 -0.043 0.0759 0.493 NK_CD56bright L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 3.98e-01 -0.0763 0.0901 0.493 NK_CD56bright L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 9.58e-01 0.00451 0.0865 0.498 NK_CD56dim L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 9.18e-01 0.00588 0.0568 0.498 NK_CD56dim L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 1.36e-01 0.114 0.0764 0.498 NK_CD56dim L2
ENSG00000112378 PERP -2485 sc-eQTL 1.86e-01 0.0908 0.0685 0.498 NK_CD56dim L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 6.37e-01 -0.0252 0.0535 0.498 NK_CD56dim L2
ENSG00000135597 REPS1 -883327 sc-eQTL 7.61e-01 -0.0214 0.0705 0.498 NK_CD56dim L2
ENSG00000146386 ABRACL -923811 sc-eQTL 1.72e-01 -0.0651 0.0475 0.498 NK_CD56dim L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 4.94e-01 0.0549 0.0801 0.498 NK_CD56dim L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 2.99e-01 0.106 0.102 0.489 NK_HLA L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 7.54e-01 0.0235 0.0751 0.489 NK_HLA L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 2.34e-01 0.104 0.0868 0.489 NK_HLA L2
ENSG00000112378 PERP -2485 sc-eQTL 7.29e-01 0.0268 0.0774 0.489 NK_HLA L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 5.95e-01 -0.0316 0.0595 0.489 NK_HLA L2
ENSG00000135597 REPS1 -883327 sc-eQTL 7.88e-01 -0.0255 0.0943 0.489 NK_HLA L2
ENSG00000146386 ABRACL -923811 sc-eQTL 2.13e-01 -0.0965 0.0773 0.489 NK_HLA L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 5.65e-01 0.0552 0.0959 0.489 NK_HLA L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 9.95e-01 0.000541 0.0907 0.498 NK_cytokine L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 6.39e-01 -0.0287 0.0611 0.498 NK_cytokine L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 3.40e-01 0.0746 0.078 0.498 NK_cytokine L2
ENSG00000112378 PERP -2485 sc-eQTL 5.37e-01 0.045 0.0728 0.498 NK_cytokine L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 5.95e-01 -0.0291 0.0545 0.498 NK_cytokine L2
ENSG00000135597 REPS1 -883327 sc-eQTL 7.93e-01 0.0212 0.0806 0.498 NK_cytokine L2
ENSG00000146386 ABRACL -923811 sc-eQTL 5.00e-01 -0.0351 0.0519 0.498 NK_cytokine L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 5.45e-01 -0.0499 0.0822 0.498 NK_cytokine L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 5.63e-01 -0.0673 0.116 0.47 PB L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 4.95e-01 -0.0838 0.122 0.47 PB L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 4.01e-01 0.0867 0.103 0.47 PB L2
ENSG00000112378 PERP -2485 sc-eQTL 1.75e-01 0.106 0.078 0.47 PB L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 8.83e-01 0.0141 0.0954 0.47 PB L2
ENSG00000135597 REPS1 -883327 sc-eQTL 3.82e-01 -0.0982 0.112 0.47 PB L2
ENSG00000146386 ABRACL -923811 sc-eQTL 3.02e-01 -0.0811 0.0782 0.47 PB L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 9.14e-01 -0.0124 0.115 0.47 PB L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 7.39e-01 0.0329 0.0984 0.5 Pro_T L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 7.43e-01 0.0247 0.0751 0.5 Pro_T L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 5.42e-01 0.0479 0.0784 0.5 Pro_T L2
ENSG00000112378 PERP -2485 sc-eQTL 6.19e-01 -0.0361 0.0725 0.5 Pro_T L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 2.86e-01 -0.0488 0.0456 0.5 Pro_T L2
ENSG00000135597 REPS1 -883327 sc-eQTL 1.06e-01 0.147 0.0907 0.5 Pro_T L2
ENSG00000146386 ABRACL -923811 sc-eQTL 3.94e-01 -0.0502 0.0588 0.5 Pro_T L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 6.47e-01 0.0407 0.0887 0.5 Pro_T L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 6.57e-02 -0.172 0.093 0.498 Treg L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 5.71e-01 0.0501 0.0881 0.498 Treg L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 1.20e-01 0.0993 0.0637 0.498 Treg L2
ENSG00000112378 PERP -2485 sc-eQTL 2.21e-01 0.123 0.1 0.498 Treg L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 4.71e-01 -0.0404 0.056 0.498 Treg L2
ENSG00000135597 REPS1 -883327 sc-eQTL 4.16e-01 -0.0655 0.0805 0.498 Treg L2
ENSG00000146386 ABRACL -923811 sc-eQTL 7.73e-01 -0.0198 0.0686 0.498 Treg L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 9.04e-01 -0.0103 0.0855 0.498 Treg L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 3.09e-02 0.199 0.0913 0.488 cDC L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 7.22e-01 0.0268 0.0753 0.488 cDC L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 8.33e-01 0.014 0.0663 0.488 cDC L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 8.57e-01 -0.0134 0.0743 0.488 cDC L2
ENSG00000135540 NHSL1 -587637 sc-eQTL 1.48e-01 0.124 0.0856 0.488 cDC L2
ENSG00000135597 REPS1 -883327 sc-eQTL 7.22e-01 0.0354 0.0992 0.488 cDC L2
ENSG00000146386 ABRACL -923811 sc-eQTL 3.06e-01 -0.0831 0.0809 0.488 cDC L2
ENSG00000225177 AL590617.2 -587614 sc-eQTL 4.39e-01 0.0736 0.0948 0.488 cDC L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 1.92e-01 0.126 0.0963 0.488 cDC L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 4.12e-01 -0.059 0.0719 0.498 cMono_IL1B L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 4.87e-01 0.0365 0.0524 0.498 cMono_IL1B L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 1.55e-01 0.0735 0.0515 0.498 cMono_IL1B L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 3.33e-01 -0.0547 0.0564 0.498 cMono_IL1B L2
ENSG00000135540 NHSL1 -587637 sc-eQTL 3.11e-01 0.0877 0.0864 0.498 cMono_IL1B L2
ENSG00000135597 REPS1 -883327 sc-eQTL 5.50e-01 0.0462 0.0773 0.498 cMono_IL1B L2
ENSG00000146386 ABRACL -923811 sc-eQTL 2.33e-01 -0.0776 0.0648 0.498 cMono_IL1B L2
ENSG00000225177 AL590617.2 -587614 sc-eQTL 4.78e-01 0.0644 0.0906 0.498 cMono_IL1B L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 4.34e-01 -0.0473 0.0602 0.498 cMono_IL1B L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 4.05e-01 0.069 0.0826 0.498 cMono_S100A L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 2.74e-01 0.0666 0.0606 0.498 cMono_S100A L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 9.73e-02 0.0937 0.0563 0.498 cMono_S100A L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 5.26e-01 -0.0343 0.054 0.498 cMono_S100A L2
ENSG00000135540 NHSL1 -587637 sc-eQTL 3.82e-01 -0.0774 0.0885 0.498 cMono_S100A L2
ENSG00000135597 REPS1 -883327 sc-eQTL 3.39e-01 -0.0802 0.0837 0.498 cMono_S100A L2
ENSG00000146386 ABRACL -923811 sc-eQTL 1.61e-01 -0.102 0.0726 0.498 cMono_S100A L2
ENSG00000225177 AL590617.2 -587614 sc-eQTL 4.90e-01 0.0671 0.097 0.498 cMono_S100A L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 2.48e-01 -0.0896 0.0773 0.498 cMono_S100A L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 1.92e-01 0.15 0.115 0.506 gdT L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 2.81e-01 0.0994 0.0919 0.506 gdT L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 7.94e-01 -0.0288 0.11 0.506 gdT L2
ENSG00000112378 PERP -2485 sc-eQTL 7.82e-01 -0.0282 0.102 0.506 gdT L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 3.79e-01 -0.0499 0.0566 0.506 gdT L2
ENSG00000135597 REPS1 -883327 sc-eQTL 7.08e-01 -0.0425 0.113 0.506 gdT L2
ENSG00000146386 ABRACL -923811 sc-eQTL 1.23e-01 -0.131 0.0845 0.506 gdT L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 3.03e-01 -0.106 0.102 0.506 gdT L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 4.74e-02 -0.188 0.0943 0.491 intMono L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 8.69e-02 0.109 0.0636 0.491 intMono L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 8.95e-01 0.00841 0.0639 0.491 intMono L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 1.40e-01 -0.0816 0.0551 0.491 intMono L2
ENSG00000135540 NHSL1 -587637 sc-eQTL 3.25e-01 -0.0848 0.086 0.491 intMono L2
ENSG00000135597 REPS1 -883327 sc-eQTL 6.00e-01 -0.0468 0.089 0.491 intMono L2
ENSG00000146386 ABRACL -923811 sc-eQTL 1.28e-02 -0.201 0.08 0.491 intMono L2
ENSG00000225177 AL590617.2 -587614 sc-eQTL 8.10e-01 0.0233 0.0966 0.491 intMono L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 4.23e-01 -0.0662 0.0824 0.491 intMono L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 8.50e-01 -0.017 0.0898 0.498 ncMono L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 4.80e-01 0.0541 0.0764 0.498 ncMono L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 7.19e-01 0.0193 0.0536 0.498 ncMono L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 9.89e-01 0.000947 0.0677 0.498 ncMono L2
ENSG00000135540 NHSL1 -587637 sc-eQTL 5.66e-01 0.0496 0.0862 0.498 ncMono L2
ENSG00000135597 REPS1 -883327 sc-eQTL 1.36e-01 0.0969 0.0647 0.498 ncMono L2
ENSG00000146386 ABRACL -923811 sc-eQTL 5.79e-01 -0.0435 0.0783 0.498 ncMono L2
ENSG00000225177 AL590617.2 -587614 sc-eQTL 2.72e-02 0.211 0.0947 0.498 ncMono L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 5.32e-01 0.053 0.0845 0.498 ncMono L2
ENSG00000024862 CCDC28A -668575 sc-eQTL 9.47e-01 -0.007 0.106 0.494 pDC L2
ENSG00000027697 IFNGR1 885485 sc-eQTL 9.97e-01 0.000308 0.0896 0.494 pDC L2
ENSG00000051620 HEBP2 -298597 sc-eQTL 9.42e-01 0.00594 0.0821 0.494 pDC L2
ENSG00000118503 TNFAIP3 237720 sc-eQTL 3.13e-01 -0.0838 0.0828 0.494 pDC L2
ENSG00000135540 NHSL1 -587637 sc-eQTL 9.85e-01 0.00156 0.0817 0.494 pDC L2
ENSG00000135597 REPS1 -883327 sc-eQTL 9.63e-01 0.00386 0.0828 0.494 pDC L2
ENSG00000146386 ABRACL -923811 sc-eQTL 9.59e-01 0.00461 0.0905 0.494 pDC L2
ENSG00000225177 AL590617.2 -587614 sc-eQTL 7.52e-01 0.026 0.0821 0.494 pDC L2
ENSG00000237499 WAKMAR2 236701 sc-eQTL 9.49e-01 -0.00542 0.0843 0.494 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -668575 sc-eQTL 7.00e-01 -0.0348 0.0901 0.498 B_Memory LOneK1K
ENSG00000027697 IFNGR1 885485 sc-eQTL 6.65e-01 0.0334 0.077 0.498 B_Memory LOneK1K
ENSG00000051620 HEBP2 -298597 sc-eQTL 5.03e-02 0.122 0.0619 0.498 B_Memory LOneK1K
ENSG00000112378 PERP -2485 sc-eQTL 6.94e-01 -0.0324 0.0823 0.498 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 237720 sc-eQTL 3.52e-01 0.0506 0.0542 0.498 B_Memory LOneK1K
ENSG00000135597 REPS1 -883327 sc-eQTL 2.94e-01 0.0874 0.083 0.498 B_Memory LOneK1K
ENSG00000146386 ABRACL -923811 sc-eQTL 1.95e-02 -0.134 0.0569 0.498 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 236701 sc-eQTL 4.45e-01 -0.0702 0.0917 0.498 B_Memory LOneK1K
ENSG00000024862 CCDC28A -668575 sc-eQTL 9.67e-02 -0.139 0.0832 0.498 B_Naive LOneK1K
ENSG00000027697 IFNGR1 885485 sc-eQTL 5.52e-01 0.0466 0.0782 0.498 B_Naive LOneK1K
ENSG00000051620 HEBP2 -298597 sc-eQTL 1.83e-01 0.0773 0.0578 0.498 B_Naive LOneK1K
ENSG00000112378 PERP -2485 sc-eQTL 6.31e-02 -0.158 0.0846 0.498 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 237720 sc-eQTL 5.03e-01 -0.03 0.0448 0.498 B_Naive LOneK1K
ENSG00000135597 REPS1 -883327 sc-eQTL 5.85e-01 0.0365 0.0667 0.498 B_Naive LOneK1K
ENSG00000146386 ABRACL -923811 sc-eQTL 5.86e-01 0.0255 0.0468 0.498 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 236701 sc-eQTL 6.64e-01 -0.0347 0.0798 0.498 B_Naive LOneK1K
ENSG00000024862 CCDC28A -668575 sc-eQTL 8.03e-01 -0.0165 0.0662 0.498 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 885485 sc-eQTL 3.67e-01 0.0476 0.0526 0.498 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -298597 sc-eQTL 7.05e-02 0.0891 0.049 0.498 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 237720 sc-eQTL 4.51e-01 -0.0368 0.0487 0.498 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -587637 sc-eQTL 6.98e-01 0.0338 0.0868 0.498 CD14_Mono LOneK1K
ENSG00000135597 REPS1 -883327 sc-eQTL 6.99e-01 0.0276 0.0714 0.498 CD14_Mono LOneK1K
ENSG00000146386 ABRACL -923811 sc-eQTL 1.93e-01 -0.0826 0.0633 0.498 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -587614 sc-eQTL 2.96e-01 0.0974 0.093 0.498 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 236701 sc-eQTL 4.07e-01 -0.0485 0.0584 0.498 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A -668575 sc-eQTL 2.81e-01 -0.0957 0.0886 0.498 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 885485 sc-eQTL 1.87e-01 0.082 0.0619 0.498 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -298597 sc-eQTL 9.18e-01 0.00489 0.0475 0.498 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 237720 sc-eQTL 5.02e-01 -0.0391 0.0581 0.498 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -587637 sc-eQTL 9.54e-01 -0.00486 0.0844 0.498 CD16_Mono LOneK1K
ENSG00000135597 REPS1 -883327 sc-eQTL 9.02e-01 0.0065 0.0525 0.498 CD16_Mono LOneK1K
ENSG00000146386 ABRACL -923811 sc-eQTL 3.76e-02 -0.159 0.0761 0.498 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -587614 sc-eQTL 1.90e-01 0.122 0.0929 0.498 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 236701 sc-eQTL 8.79e-01 0.0119 0.0779 0.498 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A -668575 sc-eQTL 7.39e-01 0.0279 0.0835 0.498 NK_CD56dim LOneK1K
ENSG00000027697 IFNGR1 885485 sc-eQTL 5.31e-01 -0.0366 0.0583 0.498 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -298597 sc-eQTL 1.02e-01 0.118 0.0719 0.498 NK_CD56dim LOneK1K
ENSG00000112378 PERP -2485 sc-eQTL 8.31e-01 0.013 0.0611 0.498 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 237720 sc-eQTL 8.79e-01 -0.00812 0.0532 0.498 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 -883327 sc-eQTL 6.31e-01 -0.0335 0.0695 0.498 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL -923811 sc-eQTL 2.02e-01 -0.0573 0.0447 0.498 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 236701 sc-eQTL 9.97e-01 0.000322 0.0744 0.498 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000112378 PERP -2485 eQTL 0.000877 0.0836 0.025 0.0071 0.00448 0.476
ENSG00000135597 REPS1 -883327 eQTL 0.00473 0.0447 0.0158 0.00184 0.0 0.476

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000112378 PERP -2485 3.22e-05 3.07e-05 6.15e-06 1.51e-05 5.74e-06 1.42e-05 4.44e-05 4.01e-06 2.93e-05 1.47e-05 3.61e-05 1.63e-05 4.74e-05 1.38e-05 6.84e-06 1.79e-05 1.7e-05 2.37e-05 7.92e-06 6.54e-06 1.42e-05 3.13e-05 3.03e-05 8.69e-06 4.33e-05 7.55e-06 1.32e-05 1.28e-05 3.31e-05 2.67e-05 1.87e-05 1.61e-06 2.61e-06 7.05e-06 1.12e-05 5.84e-06 3.16e-06 3.19e-06 4.62e-06 3.35e-06 1.7e-06 3.56e-05 3.46e-06 3.62e-07 2.43e-06 3.67e-06 4.06e-06 1.6e-06 1.57e-06
ENSG00000135597 REPS1 -883327 2.66e-07 1.01e-07 3.39e-08 1.82e-07 9.65e-08 9.3e-08 1.39e-07 5.49e-08 1.37e-07 4.24e-08 1.62e-07 7.58e-08 1.27e-07 6.21e-08 4.84e-08 8.01e-08 4.63e-08 1.14e-07 5.2e-08 3.74e-08 1.04e-07 1.33e-07 1.29e-07 4.53e-08 1.31e-07 1.13e-07 1.1e-07 8.7e-08 1.03e-07 1.11e-07 9.75e-08 3.98e-08 2.74e-08 8.82e-08 8.82e-08 3.93e-08 5.06e-08 9.44e-08 8.3e-08 3.05e-08 3.66e-08 1.36e-07 3.98e-08 1.09e-08 7.79e-08 1.72e-08 1.34e-07 4.33e-09 4.85e-08