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Genes within 1Mb (chr6:138093950:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -679559 sc-eQTL 7.06e-01 0.0606 0.161 0.944 B L1
ENSG00000027697 IFNGR1 874501 sc-eQTL 8.69e-01 -0.0258 0.156 0.944 B L1
ENSG00000051620 HEBP2 -309581 sc-eQTL 6.76e-01 0.0513 0.123 0.944 B L1
ENSG00000112378 PERP -13469 sc-eQTL 4.10e-02 0.249 0.121 0.944 B L1
ENSG00000118503 TNFAIP3 226736 sc-eQTL 6.14e-01 0.0497 0.0986 0.944 B L1
ENSG00000135597 REPS1 -894311 sc-eQTL 7.84e-02 0.242 0.137 0.944 B L1
ENSG00000146386 ABRACL -934795 sc-eQTL 9.75e-01 0.00251 0.0811 0.944 B L1
ENSG00000237499 WAKMAR2 225717 sc-eQTL 3.39e-01 0.148 0.155 0.944 B L1
ENSG00000024862 CCDC28A -679559 sc-eQTL 4.96e-01 -0.124 0.181 0.944 CD4T L1
ENSG00000027697 IFNGR1 874501 sc-eQTL 6.82e-01 0.0434 0.106 0.944 CD4T L1
ENSG00000051620 HEBP2 -309581 sc-eQTL 9.04e-01 -0.0146 0.122 0.944 CD4T L1
ENSG00000112378 PERP -13469 sc-eQTL 9.08e-01 -0.0133 0.115 0.944 CD4T L1
ENSG00000118503 TNFAIP3 226736 sc-eQTL 8.51e-01 -0.0201 0.107 0.944 CD4T L1
ENSG00000135597 REPS1 -894311 sc-eQTL 9.94e-01 0.000911 0.119 0.944 CD4T L1
ENSG00000146386 ABRACL -934795 sc-eQTL 7.70e-01 0.0255 0.0871 0.944 CD4T L1
ENSG00000237499 WAKMAR2 225717 sc-eQTL 4.41e-01 0.104 0.135 0.944 CD4T L1
ENSG00000024862 CCDC28A -679559 sc-eQTL 9.01e-01 0.0245 0.197 0.944 CD8T L1
ENSG00000027697 IFNGR1 874501 sc-eQTL 9.71e-01 0.00439 0.121 0.944 CD8T L1
ENSG00000051620 HEBP2 -309581 sc-eQTL 9.60e-01 -0.00653 0.129 0.944 CD8T L1
ENSG00000112378 PERP -13469 sc-eQTL 2.86e-01 0.14 0.131 0.944 CD8T L1
ENSG00000118503 TNFAIP3 226736 sc-eQTL 8.80e-01 0.0153 0.102 0.944 CD8T L1
ENSG00000135597 REPS1 -894311 sc-eQTL 1.01e-01 0.217 0.132 0.944 CD8T L1
ENSG00000146386 ABRACL -934795 sc-eQTL 1.23e-01 0.116 0.0751 0.944 CD8T L1
ENSG00000237499 WAKMAR2 225717 sc-eQTL 7.91e-01 0.0395 0.149 0.944 CD8T L1
ENSG00000024862 CCDC28A -679559 sc-eQTL 1.03e-01 -0.337 0.206 0.944 DC L1
ENSG00000027697 IFNGR1 874501 sc-eQTL 4.04e-02 0.314 0.152 0.944 DC L1
ENSG00000051620 HEBP2 -309581 sc-eQTL 2.90e-01 -0.154 0.145 0.944 DC L1
ENSG00000118503 TNFAIP3 226736 sc-eQTL 6.45e-01 -0.0758 0.164 0.944 DC L1
ENSG00000135540 NHSL1 -598621 sc-eQTL 7.44e-01 0.0622 0.19 0.944 DC L1
ENSG00000135597 REPS1 -894311 sc-eQTL 2.64e-01 0.188 0.168 0.944 DC L1
ENSG00000146386 ABRACL -934795 sc-eQTL 1.48e-02 -0.399 0.162 0.944 DC L1
ENSG00000225177 AL590617.2 -598598 sc-eQTL 6.24e-02 0.369 0.197 0.944 DC L1
ENSG00000237499 WAKMAR2 225717 sc-eQTL 8.57e-01 -0.0302 0.168 0.944 DC L1
ENSG00000024862 CCDC28A -679559 sc-eQTL 9.02e-01 0.0176 0.143 0.944 Mono L1
ENSG00000027697 IFNGR1 874501 sc-eQTL 7.69e-01 -0.0357 0.122 0.944 Mono L1
ENSG00000051620 HEBP2 -309581 sc-eQTL 5.50e-01 0.059 0.0985 0.944 Mono L1
ENSG00000118503 TNFAIP3 226736 sc-eQTL 5.74e-01 -0.058 0.103 0.944 Mono L1
ENSG00000135540 NHSL1 -598621 sc-eQTL 8.82e-01 0.0277 0.186 0.944 Mono L1
ENSG00000135597 REPS1 -894311 sc-eQTL 7.05e-01 0.0413 0.109 0.944 Mono L1
ENSG00000146386 ABRACL -934795 sc-eQTL 7.53e-01 0.0447 0.142 0.944 Mono L1
ENSG00000225177 AL590617.2 -598598 sc-eQTL 1.54e-01 0.276 0.193 0.944 Mono L1
ENSG00000237499 WAKMAR2 225717 sc-eQTL 6.69e-01 -0.0547 0.128 0.944 Mono L1
ENSG00000024862 CCDC28A -679559 sc-eQTL 9.47e-02 -0.296 0.176 0.944 NK L1
ENSG00000027697 IFNGR1 874501 sc-eQTL 2.98e-01 0.142 0.136 0.944 NK L1
ENSG00000051620 HEBP2 -309581 sc-eQTL 7.63e-01 -0.0471 0.156 0.944 NK L1
ENSG00000112378 PERP -13469 sc-eQTL 8.32e-01 0.0282 0.133 0.944 NK L1
ENSG00000118503 TNFAIP3 226736 sc-eQTL 8.35e-01 0.0236 0.114 0.944 NK L1
ENSG00000135597 REPS1 -894311 sc-eQTL 1.36e-01 -0.218 0.145 0.944 NK L1
ENSG00000146386 ABRACL -934795 sc-eQTL 9.00e-02 0.18 0.106 0.944 NK L1
ENSG00000237499 WAKMAR2 225717 sc-eQTL 2.69e-01 0.178 0.16 0.944 NK L1
ENSG00000024862 CCDC28A -679559 sc-eQTL 3.51e-02 -0.445 0.21 0.944 Other_T L1
ENSG00000027697 IFNGR1 874501 sc-eQTL 9.46e-01 -0.00881 0.129 0.944 Other_T L1
ENSG00000051620 HEBP2 -309581 sc-eQTL 9.54e-01 -0.00793 0.137 0.944 Other_T L1
ENSG00000112378 PERP -13469 sc-eQTL 8.32e-01 0.0359 0.169 0.944 Other_T L1
ENSG00000118503 TNFAIP3 226736 sc-eQTL 6.88e-01 0.0323 0.0803 0.944 Other_T L1
ENSG00000135597 REPS1 -894311 sc-eQTL 1.31e-01 0.249 0.164 0.944 Other_T L1
ENSG00000146386 ABRACL -934795 sc-eQTL 9.87e-01 0.00179 0.108 0.944 Other_T L1
ENSG00000237499 WAKMAR2 225717 sc-eQTL 9.51e-01 0.00987 0.159 0.944 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -679559 sc-eQTL 3.42e-01 0.211 0.222 0.939 B_Activated L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 3.56e-01 0.183 0.198 0.939 B_Activated L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 5.82e-01 -0.107 0.195 0.939 B_Activated L2
ENSG00000112378 PERP -13469 sc-eQTL 4.54e-01 0.0759 0.101 0.939 B_Activated L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 8.88e-01 0.0276 0.196 0.939 B_Activated L2
ENSG00000135597 REPS1 -894311 sc-eQTL 3.15e-01 0.223 0.221 0.939 B_Activated L2
ENSG00000146386 ABRACL -934795 sc-eQTL 5.65e-02 -0.381 0.199 0.939 B_Activated L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 2.62e-01 0.192 0.171 0.939 B_Activated L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 4.54e-01 0.15 0.2 0.944 B_Intermediate L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 2.64e-01 -0.207 0.185 0.944 B_Intermediate L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 7.25e-02 0.249 0.138 0.944 B_Intermediate L2
ENSG00000112378 PERP -13469 sc-eQTL 4.13e-01 0.145 0.176 0.944 B_Intermediate L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 1.11e-01 -0.22 0.138 0.944 B_Intermediate L2
ENSG00000135597 REPS1 -894311 sc-eQTL 8.74e-01 0.0298 0.187 0.944 B_Intermediate L2
ENSG00000146386 ABRACL -934795 sc-eQTL 7.05e-01 0.0604 0.159 0.944 B_Intermediate L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 2.27e-01 0.237 0.196 0.944 B_Intermediate L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 7.62e-01 0.0626 0.206 0.944 B_Memory L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 1.12e-01 -0.323 0.202 0.944 B_Memory L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 8.83e-01 0.0228 0.155 0.944 B_Memory L2
ENSG00000112378 PERP -13469 sc-eQTL 4.11e-01 -0.159 0.193 0.944 B_Memory L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 2.96e-01 -0.139 0.133 0.944 B_Memory L2
ENSG00000135597 REPS1 -894311 sc-eQTL 9.18e-01 0.02 0.193 0.944 B_Memory L2
ENSG00000146386 ABRACL -934795 sc-eQTL 9.42e-01 0.0112 0.153 0.944 B_Memory L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 6.72e-01 -0.0841 0.198 0.944 B_Memory L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 4.91e-01 0.134 0.195 0.944 B_Naive1 L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 5.95e-01 0.0857 0.161 0.944 B_Naive1 L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 6.59e-01 0.0605 0.137 0.944 B_Naive1 L2
ENSG00000112378 PERP -13469 sc-eQTL 4.75e-01 0.133 0.185 0.944 B_Naive1 L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 9.73e-01 -0.00363 0.108 0.944 B_Naive1 L2
ENSG00000135597 REPS1 -894311 sc-eQTL 3.71e-02 0.326 0.156 0.944 B_Naive1 L2
ENSG00000146386 ABRACL -934795 sc-eQTL 1.61e-01 -0.154 0.109 0.944 B_Naive1 L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 5.79e-01 0.0937 0.169 0.944 B_Naive1 L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 6.61e-01 0.0841 0.192 0.944 B_Naive2 L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 1.32e-01 -0.297 0.197 0.944 B_Naive2 L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 8.81e-01 0.0197 0.131 0.944 B_Naive2 L2
ENSG00000112378 PERP -13469 sc-eQTL 2.67e-01 -0.175 0.157 0.944 B_Naive2 L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 4.50e-01 -0.119 0.157 0.944 B_Naive2 L2
ENSG00000135597 REPS1 -894311 sc-eQTL 2.66e-01 0.191 0.172 0.944 B_Naive2 L2
ENSG00000146386 ABRACL -934795 sc-eQTL 7.89e-02 -0.222 0.126 0.944 B_Naive2 L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 5.70e-01 0.116 0.204 0.944 B_Naive2 L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 8.94e-01 0.0264 0.198 0.948 CD4_CTL L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 2.23e-01 0.226 0.185 0.948 CD4_CTL L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 2.20e-01 -0.21 0.17 0.948 CD4_CTL L2
ENSG00000112378 PERP -13469 sc-eQTL 7.86e-01 0.0567 0.208 0.948 CD4_CTL L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 9.51e-01 0.00749 0.122 0.948 CD4_CTL L2
ENSG00000135597 REPS1 -894311 sc-eQTL 2.01e-01 -0.248 0.193 0.948 CD4_CTL L2
ENSG00000146386 ABRACL -934795 sc-eQTL 2.52e-01 0.202 0.176 0.948 CD4_CTL L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 8.16e-02 0.329 0.188 0.948 CD4_CTL L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 1.72e-01 -0.26 0.189 0.944 CD4_Naive L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 7.57e-02 0.178 0.0998 0.944 CD4_Naive L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 9.80e-01 -0.00292 0.119 0.944 CD4_Naive L2
ENSG00000112378 PERP -13469 sc-eQTL 2.81e-01 0.169 0.156 0.944 CD4_Naive L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 8.44e-01 -0.0217 0.11 0.944 CD4_Naive L2
ENSG00000135597 REPS1 -894311 sc-eQTL 6.58e-01 -0.0582 0.131 0.944 CD4_Naive L2
ENSG00000146386 ABRACL -934795 sc-eQTL 6.49e-01 0.0402 0.0882 0.944 CD4_Naive L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 4.38e-01 0.11 0.142 0.944 CD4_Naive L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 4.87e-01 -0.131 0.188 0.944 CD4_TCM L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 3.65e-01 -0.129 0.142 0.944 CD4_TCM L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 7.30e-01 0.0484 0.14 0.944 CD4_TCM L2
ENSG00000112378 PERP -13469 sc-eQTL 4.07e-01 0.146 0.176 0.944 CD4_TCM L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 7.76e-01 -0.0291 0.102 0.944 CD4_TCM L2
ENSG00000135597 REPS1 -894311 sc-eQTL 5.20e-01 0.0921 0.143 0.944 CD4_TCM L2
ENSG00000146386 ABRACL -934795 sc-eQTL 7.35e-01 0.0373 0.11 0.944 CD4_TCM L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 7.86e-01 0.0389 0.143 0.944 CD4_TCM L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 9.35e-01 -0.0171 0.211 0.944 CD4_TEM L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 1.41e-01 -0.235 0.159 0.944 CD4_TEM L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 7.78e-01 -0.0405 0.144 0.944 CD4_TEM L2
ENSG00000112378 PERP -13469 sc-eQTL 8.08e-01 -0.0407 0.167 0.944 CD4_TEM L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 8.20e-01 -0.0241 0.106 0.944 CD4_TEM L2
ENSG00000135597 REPS1 -894311 sc-eQTL 1.73e-01 0.244 0.178 0.944 CD4_TEM L2
ENSG00000146386 ABRACL -934795 sc-eQTL 5.76e-01 0.0715 0.128 0.944 CD4_TEM L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 6.20e-01 0.0845 0.17 0.944 CD4_TEM L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 8.31e-01 0.0471 0.22 0.944 CD8_CTL L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 7.96e-01 0.0384 0.148 0.944 CD8_CTL L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 7.68e-01 0.0464 0.157 0.944 CD8_CTL L2
ENSG00000112378 PERP -13469 sc-eQTL 5.15e-01 0.128 0.196 0.944 CD8_CTL L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 6.22e-01 0.0616 0.125 0.944 CD8_CTL L2
ENSG00000135597 REPS1 -894311 sc-eQTL 8.64e-01 0.0294 0.172 0.944 CD8_CTL L2
ENSG00000146386 ABRACL -934795 sc-eQTL 1.56e-01 0.197 0.138 0.944 CD8_CTL L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 5.72e-01 -0.0994 0.176 0.944 CD8_CTL L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 6.96e-02 -0.381 0.209 0.944 CD8_Naive L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 3.63e-01 0.133 0.146 0.944 CD8_Naive L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 6.93e-02 -0.244 0.133 0.944 CD8_Naive L2
ENSG00000112378 PERP -13469 sc-eQTL 1.26e-01 0.247 0.161 0.944 CD8_Naive L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 7.61e-01 -0.0349 0.115 0.944 CD8_Naive L2
ENSG00000135597 REPS1 -894311 sc-eQTL 7.24e-01 0.0575 0.163 0.944 CD8_Naive L2
ENSG00000146386 ABRACL -934795 sc-eQTL 9.18e-01 0.00883 0.0854 0.944 CD8_Naive L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 6.12e-01 -0.0862 0.169 0.944 CD8_Naive L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 8.68e-01 -0.0388 0.233 0.947 CD8_TCM L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 3.74e-01 -0.171 0.192 0.947 CD8_TCM L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 9.91e-01 -0.00194 0.164 0.947 CD8_TCM L2
ENSG00000112378 PERP -13469 sc-eQTL 7.30e-01 0.0746 0.216 0.947 CD8_TCM L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 9.74e-01 -0.00344 0.104 0.947 CD8_TCM L2
ENSG00000135597 REPS1 -894311 sc-eQTL 3.71e-01 -0.159 0.177 0.947 CD8_TCM L2
ENSG00000146386 ABRACL -934795 sc-eQTL 9.90e-01 -0.00224 0.177 0.947 CD8_TCM L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 1.34e-01 0.285 0.19 0.947 CD8_TCM L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 1.29e-01 0.31 0.204 0.941 CD8_TEM L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 1.71e-01 0.243 0.177 0.941 CD8_TEM L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 2.84e-01 -0.199 0.186 0.941 CD8_TEM L2
ENSG00000112378 PERP -13469 sc-eQTL 4.83e-01 -0.149 0.212 0.941 CD8_TEM L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 6.01e-01 0.0685 0.131 0.941 CD8_TEM L2
ENSG00000135597 REPS1 -894311 sc-eQTL 3.22e-01 0.198 0.199 0.941 CD8_TEM L2
ENSG00000146386 ABRACL -934795 sc-eQTL 9.36e-01 0.0123 0.154 0.941 CD8_TEM L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 2.79e-01 0.21 0.194 0.941 CD8_TEM L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 3.42e-01 -0.221 0.232 0.944 MAIT L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 1.27e-01 0.229 0.15 0.944 MAIT L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 9.13e-01 0.0176 0.161 0.944 MAIT L2
ENSG00000112378 PERP -13469 sc-eQTL 4.67e-01 -0.155 0.213 0.944 MAIT L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 5.79e-01 0.0563 0.101 0.944 MAIT L2
ENSG00000135597 REPS1 -894311 sc-eQTL 3.54e-02 0.398 0.188 0.944 MAIT L2
ENSG00000146386 ABRACL -934795 sc-eQTL 9.41e-02 0.234 0.139 0.944 MAIT L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 4.28e-01 0.149 0.187 0.944 MAIT L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 1.98e-01 -0.267 0.207 0.944 NK_CD56bright L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 8.42e-01 0.0324 0.162 0.944 NK_CD56bright L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 6.65e-01 0.0767 0.177 0.944 NK_CD56bright L2
ENSG00000112378 PERP -13469 sc-eQTL 6.91e-01 0.0754 0.189 0.944 NK_CD56bright L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 2.12e-01 0.15 0.12 0.944 NK_CD56bright L2
ENSG00000135597 REPS1 -894311 sc-eQTL 2.85e-01 -0.188 0.175 0.944 NK_CD56bright L2
ENSG00000146386 ABRACL -934795 sc-eQTL 3.61e-01 -0.148 0.162 0.944 NK_CD56bright L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 7.63e-01 -0.058 0.192 0.944 NK_CD56bright L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 1.78e-01 -0.259 0.191 0.946 NK_CD56dim L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 3.84e-01 0.11 0.126 0.946 NK_CD56dim L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 3.60e-01 -0.156 0.17 0.946 NK_CD56dim L2
ENSG00000112378 PERP -13469 sc-eQTL 4.22e-01 0.123 0.153 0.946 NK_CD56dim L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 6.27e-01 -0.0579 0.119 0.946 NK_CD56dim L2
ENSG00000135597 REPS1 -894311 sc-eQTL 3.84e-01 -0.136 0.156 0.946 NK_CD56dim L2
ENSG00000146386 ABRACL -934795 sc-eQTL 1.04e-01 0.172 0.105 0.946 NK_CD56dim L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 5.28e-01 0.113 0.178 0.946 NK_CD56dim L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 6.37e-01 -0.103 0.219 0.947 NK_HLA L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 1.67e-01 0.222 0.16 0.947 NK_HLA L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 5.20e-01 -0.12 0.186 0.947 NK_HLA L2
ENSG00000112378 PERP -13469 sc-eQTL 9.83e-01 0.0036 0.166 0.947 NK_HLA L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 8.58e-01 0.0229 0.127 0.947 NK_HLA L2
ENSG00000135597 REPS1 -894311 sc-eQTL 1.97e-01 -0.26 0.201 0.947 NK_HLA L2
ENSG00000146386 ABRACL -934795 sc-eQTL 9.66e-01 -0.00708 0.166 0.947 NK_HLA L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 5.26e-01 -0.13 0.205 0.947 NK_HLA L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 5.86e-01 -0.106 0.195 0.946 NK_cytokine L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 1.84e-01 0.175 0.131 0.946 NK_cytokine L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 5.04e-01 0.112 0.168 0.946 NK_cytokine L2
ENSG00000112378 PERP -13469 sc-eQTL 5.93e-01 -0.0837 0.157 0.946 NK_cytokine L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 6.27e-01 0.0571 0.117 0.946 NK_cytokine L2
ENSG00000135597 REPS1 -894311 sc-eQTL 1.35e-01 -0.259 0.173 0.946 NK_cytokine L2
ENSG00000146386 ABRACL -934795 sc-eQTL 5.92e-01 0.06 0.112 0.946 NK_cytokine L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 1.92e-01 0.231 0.176 0.946 NK_cytokine L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 7.64e-01 -0.068 0.226 0.933 PB L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 4.54e-02 -0.475 0.235 0.933 PB L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 9.52e-01 -0.0121 0.201 0.933 PB L2
ENSG00000112378 PERP -13469 sc-eQTL 8.02e-01 -0.0384 0.153 0.933 PB L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 9.22e-02 0.311 0.183 0.933 PB L2
ENSG00000135597 REPS1 -894311 sc-eQTL 9.87e-01 0.00365 0.219 0.933 PB L2
ENSG00000146386 ABRACL -934795 sc-eQTL 9.88e-01 0.0023 0.153 0.933 PB L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 4.14e-01 0.182 0.222 0.933 PB L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 6.79e-01 -0.0891 0.215 0.943 Pro_T L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 3.23e-01 -0.162 0.164 0.943 Pro_T L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 4.95e-01 -0.117 0.171 0.943 Pro_T L2
ENSG00000112378 PERP -13469 sc-eQTL 2.13e-01 0.197 0.158 0.943 Pro_T L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 9.40e-01 -0.00747 0.0999 0.943 Pro_T L2
ENSG00000135597 REPS1 -894311 sc-eQTL 7.99e-01 0.0508 0.199 0.943 Pro_T L2
ENSG00000146386 ABRACL -934795 sc-eQTL 7.61e-01 0.0391 0.129 0.943 Pro_T L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 9.12e-01 -0.0214 0.194 0.943 Pro_T L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 3.04e-01 -0.208 0.202 0.944 Treg L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 2.06e-01 -0.241 0.19 0.944 Treg L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 6.29e-01 0.0668 0.138 0.944 Treg L2
ENSG00000112378 PERP -13469 sc-eQTL 8.27e-02 -0.377 0.216 0.944 Treg L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 1.60e-01 -0.17 0.121 0.944 Treg L2
ENSG00000135597 REPS1 -894311 sc-eQTL 3.16e-01 -0.175 0.174 0.944 Treg L2
ENSG00000146386 ABRACL -934795 sc-eQTL 7.84e-01 0.0407 0.148 0.944 Treg L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 3.31e-01 0.18 0.184 0.944 Treg L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 3.22e-01 0.207 0.208 0.944 cDC L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 4.21e-01 0.137 0.17 0.944 cDC L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 7.68e-01 0.0442 0.15 0.944 cDC L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 4.19e-01 -0.136 0.167 0.944 cDC L2
ENSG00000135540 NHSL1 -598621 sc-eQTL 5.26e-01 0.123 0.194 0.944 cDC L2
ENSG00000135597 REPS1 -894311 sc-eQTL 6.62e-01 0.098 0.224 0.944 cDC L2
ENSG00000146386 ABRACL -934795 sc-eQTL 8.98e-02 -0.31 0.182 0.944 cDC L2
ENSG00000225177 AL590617.2 -598598 sc-eQTL 5.91e-02 0.403 0.212 0.944 cDC L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 6.02e-01 0.114 0.218 0.944 cDC L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 8.96e-01 -0.02 0.153 0.944 cMono_IL1B L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 9.45e-01 0.00767 0.112 0.944 cMono_IL1B L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 7.89e-01 0.0295 0.11 0.944 cMono_IL1B L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 5.00e-01 0.0812 0.12 0.944 cMono_IL1B L2
ENSG00000135540 NHSL1 -598621 sc-eQTL 8.00e-01 0.0468 0.184 0.944 cMono_IL1B L2
ENSG00000135597 REPS1 -894311 sc-eQTL 7.75e-01 -0.0471 0.165 0.944 cMono_IL1B L2
ENSG00000146386 ABRACL -934795 sc-eQTL 5.33e-01 0.0864 0.138 0.944 cMono_IL1B L2
ENSG00000225177 AL590617.2 -598598 sc-eQTL 7.67e-01 -0.0573 0.193 0.944 cMono_IL1B L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 4.62e-01 0.0944 0.128 0.944 cMono_IL1B L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 3.14e-01 0.178 0.177 0.944 cMono_S100A L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 4.19e-01 -0.105 0.13 0.944 cMono_S100A L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 7.87e-01 0.0328 0.121 0.944 cMono_S100A L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 8.02e-01 0.029 0.116 0.944 cMono_S100A L2
ENSG00000135540 NHSL1 -598621 sc-eQTL 5.91e-01 0.102 0.19 0.944 cMono_S100A L2
ENSG00000135597 REPS1 -894311 sc-eQTL 2.95e-01 -0.188 0.179 0.944 cMono_S100A L2
ENSG00000146386 ABRACL -934795 sc-eQTL 8.76e-01 0.0243 0.156 0.944 cMono_S100A L2
ENSG00000225177 AL590617.2 -598598 sc-eQTL 1.82e-02 0.488 0.205 0.944 cMono_S100A L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 9.19e-01 -0.017 0.166 0.944 cMono_S100A L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 4.02e-03 -0.59 0.203 0.942 intMono L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 6.58e-01 -0.0617 0.139 0.942 intMono L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 1.47e-01 0.201 0.138 0.942 intMono L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 3.56e-01 -0.111 0.12 0.942 intMono L2
ENSG00000135540 NHSL1 -598621 sc-eQTL 1.23e-01 -0.288 0.186 0.942 intMono L2
ENSG00000135597 REPS1 -894311 sc-eQTL 7.75e-01 0.0554 0.194 0.942 intMono L2
ENSG00000146386 ABRACL -934795 sc-eQTL 6.50e-01 0.0803 0.177 0.942 intMono L2
ENSG00000225177 AL590617.2 -598598 sc-eQTL 8.76e-01 0.0328 0.21 0.942 intMono L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 2.62e-02 -0.397 0.177 0.942 intMono L2
ENSG00000024862 CCDC28A -679559 sc-eQTL 3.53e-01 -0.184 0.198 0.943 ncMono L2
ENSG00000027697 IFNGR1 874501 sc-eQTL 3.16e-01 -0.169 0.168 0.943 ncMono L2
ENSG00000051620 HEBP2 -309581 sc-eQTL 3.60e-01 -0.108 0.118 0.943 ncMono L2
ENSG00000118503 TNFAIP3 226736 sc-eQTL 7.09e-01 -0.0559 0.149 0.943 ncMono L2
ENSG00000135540 NHSL1 -598621 sc-eQTL 6.45e-02 0.351 0.189 0.943 ncMono L2
ENSG00000135597 REPS1 -894311 sc-eQTL 6.96e-01 0.0562 0.143 0.943 ncMono L2
ENSG00000146386 ABRACL -934795 sc-eQTL 5.46e-01 0.104 0.173 0.943 ncMono L2
ENSG00000225177 AL590617.2 -598598 sc-eQTL 7.73e-01 0.0609 0.211 0.943 ncMono L2
ENSG00000237499 WAKMAR2 225717 sc-eQTL 2.91e-01 -0.197 0.186 0.943 ncMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -679559 sc-eQTL 6.97e-01 0.075 0.193 0.944 B_Memory LOneK1K
ENSG00000027697 IFNGR1 874501 sc-eQTL 3.37e-01 -0.158 0.164 0.944 B_Memory LOneK1K
ENSG00000051620 HEBP2 -309581 sc-eQTL 3.88e-01 0.115 0.133 0.944 B_Memory LOneK1K
ENSG00000112378 PERP -13469 sc-eQTL 6.29e-01 -0.085 0.176 0.944 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 226736 sc-eQTL 3.62e-01 -0.106 0.116 0.944 B_Memory LOneK1K
ENSG00000135597 REPS1 -894311 sc-eQTL 8.37e-01 0.0366 0.178 0.944 B_Memory LOneK1K
ENSG00000146386 ABRACL -934795 sc-eQTL 9.13e-01 -0.0134 0.123 0.944 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 225717 sc-eQTL 3.16e-01 0.197 0.196 0.944 B_Memory LOneK1K
ENSG00000024862 CCDC28A -679559 sc-eQTL 3.56e-01 0.168 0.181 0.944 B_Naive LOneK1K
ENSG00000027697 IFNGR1 874501 sc-eQTL 7.09e-01 0.0635 0.17 0.944 B_Naive LOneK1K
ENSG00000051620 HEBP2 -309581 sc-eQTL 5.76e-01 0.0705 0.126 0.944 B_Naive LOneK1K
ENSG00000112378 PERP -13469 sc-eQTL 8.82e-01 0.0275 0.185 0.944 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 226736 sc-eQTL 7.36e-01 0.0328 0.0973 0.944 B_Naive LOneK1K
ENSG00000135597 REPS1 -894311 sc-eQTL 1.66e-02 0.345 0.143 0.944 B_Naive LOneK1K
ENSG00000146386 ABRACL -934795 sc-eQTL 2.24e-01 -0.124 0.101 0.944 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 225717 sc-eQTL 5.51e-01 0.104 0.173 0.944 B_Naive LOneK1K
ENSG00000024862 CCDC28A -679559 sc-eQTL 3.48e-01 0.133 0.142 0.944 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 874501 sc-eQTL 6.49e-01 -0.0516 0.113 0.944 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -309581 sc-eQTL 4.82e-01 0.0746 0.106 0.944 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 226736 sc-eQTL 7.81e-01 0.0291 0.105 0.944 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -598621 sc-eQTL 6.41e-01 0.0871 0.186 0.944 CD14_Mono LOneK1K
ENSG00000135597 REPS1 -894311 sc-eQTL 7.33e-01 -0.0523 0.153 0.944 CD14_Mono LOneK1K
ENSG00000146386 ABRACL -934795 sc-eQTL 8.13e-01 0.0323 0.136 0.944 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -598598 sc-eQTL 2.81e-01 0.215 0.199 0.944 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 225717 sc-eQTL 6.79e-01 0.0519 0.125 0.944 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A -679559 sc-eQTL 3.39e-02 -0.412 0.193 0.944 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 874501 sc-eQTL 2.81e-01 -0.147 0.136 0.944 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -309581 sc-eQTL 7.89e-01 -0.0278 0.104 0.944 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 226736 sc-eQTL 5.82e-01 -0.0701 0.127 0.944 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -598621 sc-eQTL 5.06e-01 0.123 0.185 0.944 CD16_Mono LOneK1K
ENSG00000135597 REPS1 -894311 sc-eQTL 8.57e-01 -0.0207 0.115 0.944 CD16_Mono LOneK1K
ENSG00000146386 ABRACL -934795 sc-eQTL 4.97e-01 0.114 0.168 0.944 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -598598 sc-eQTL 5.53e-01 0.121 0.204 0.944 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 225717 sc-eQTL 7.83e-02 -0.3 0.169 0.944 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A -679559 sc-eQTL 6.70e-02 -0.338 0.183 0.946 NK_CD56dim LOneK1K
ENSG00000027697 IFNGR1 874501 sc-eQTL 2.96e-01 0.135 0.129 0.946 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -309581 sc-eQTL 8.34e-01 -0.0336 0.16 0.946 NK_CD56dim LOneK1K
ENSG00000112378 PERP -13469 sc-eQTL 8.62e-01 0.0236 0.135 0.946 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 226736 sc-eQTL 8.78e-01 0.0181 0.118 0.946 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 -894311 sc-eQTL 1.98e-01 -0.198 0.154 0.946 NK_CD56dim LOneK1K
ENSG00000146386 ABRACL -934795 sc-eQTL 9.56e-02 0.165 0.0988 0.946 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 225717 sc-eQTL 2.56e-01 0.187 0.164 0.946 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000024862 CCDC28A -679559 eQTL 0.0291 -0.0529 0.0242 0.0 0.0 0.109
ENSG00000051620 HEBP2 -309581 eQTL 0.0112 -0.0753 0.0297 0.0 0.0 0.109
ENSG00000279968 GVQW2 -679702 eQTL 0.00791 -0.181 0.0679 0.0 0.0 0.109

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina