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Genes within 1Mb (chr6:138028035:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -745474 sc-eQTL 6.93e-01 0.0343 0.0866 0.241 B L1
ENSG00000027697 IFNGR1 808586 sc-eQTL 3.06e-01 -0.0863 0.0841 0.241 B L1
ENSG00000051620 HEBP2 -375496 sc-eQTL 4.04e-01 -0.0552 0.066 0.241 B L1
ENSG00000112378 PERP -79384 sc-eQTL 7.58e-01 0.0204 0.066 0.241 B L1
ENSG00000118503 TNFAIP3 160821 sc-eQTL 8.03e-01 -0.0133 0.0532 0.241 B L1
ENSG00000135597 REPS1 -960226 sc-eQTL 1.65e-01 0.103 0.0741 0.241 B L1
ENSG00000237499 WAKMAR2 159802 sc-eQTL 6.64e-01 -0.0364 0.0836 0.241 B L1
ENSG00000024862 CCDC28A -745474 sc-eQTL 4.73e-02 -0.188 0.0943 0.241 CD4T L1
ENSG00000027697 IFNGR1 808586 sc-eQTL 1.40e-01 -0.0821 0.0554 0.241 CD4T L1
ENSG00000051620 HEBP2 -375496 sc-eQTL 7.75e-02 -0.112 0.0634 0.241 CD4T L1
ENSG00000112378 PERP -79384 sc-eQTL 6.10e-01 0.0307 0.0602 0.241 CD4T L1
ENSG00000118503 TNFAIP3 160821 sc-eQTL 8.81e-01 0.00844 0.0564 0.241 CD4T L1
ENSG00000135597 REPS1 -960226 sc-eQTL 8.50e-02 0.107 0.0619 0.241 CD4T L1
ENSG00000237499 WAKMAR2 159802 sc-eQTL 5.05e-01 -0.0473 0.071 0.241 CD4T L1
ENSG00000024862 CCDC28A -745474 sc-eQTL 7.35e-01 -0.0351 0.104 0.241 CD8T L1
ENSG00000027697 IFNGR1 808586 sc-eQTL 8.45e-02 -0.109 0.0629 0.241 CD8T L1
ENSG00000051620 HEBP2 -375496 sc-eQTL 1.40e-01 -0.0999 0.0675 0.241 CD8T L1
ENSG00000112378 PERP -79384 sc-eQTL 2.64e-01 0.0771 0.0689 0.241 CD8T L1
ENSG00000118503 TNFAIP3 160821 sc-eQTL 6.05e-01 0.0277 0.0533 0.241 CD8T L1
ENSG00000135597 REPS1 -960226 sc-eQTL 6.38e-01 0.0328 0.0697 0.241 CD8T L1
ENSG00000237499 WAKMAR2 159802 sc-eQTL 8.42e-01 -0.0156 0.0783 0.241 CD8T L1
ENSG00000024862 CCDC28A -745474 sc-eQTL 6.64e-01 -0.046 0.106 0.239 DC L1
ENSG00000027697 IFNGR1 808586 sc-eQTL 1.08e-01 -0.126 0.0781 0.239 DC L1
ENSG00000051620 HEBP2 -375496 sc-eQTL 2.40e-01 -0.0875 0.0742 0.239 DC L1
ENSG00000118503 TNFAIP3 160821 sc-eQTL 3.83e-01 0.0733 0.0838 0.239 DC L1
ENSG00000135540 NHSL1 -664536 sc-eQTL 9.51e-01 -0.00601 0.0971 0.239 DC L1
ENSG00000135597 REPS1 -960226 sc-eQTL 1.17e-01 -0.134 0.0853 0.239 DC L1
ENSG00000225177 AL590617.2 -664513 sc-eQTL 1.37e-01 -0.151 0.101 0.239 DC L1
ENSG00000237499 WAKMAR2 159802 sc-eQTL 1.99e-01 -0.11 0.0852 0.239 DC L1
ENSG00000024862 CCDC28A -745474 sc-eQTL 8.87e-02 -0.129 0.0754 0.241 Mono L1
ENSG00000027697 IFNGR1 808586 sc-eQTL 5.09e-01 -0.0428 0.0647 0.241 Mono L1
ENSG00000051620 HEBP2 -375496 sc-eQTL 6.15e-01 0.0264 0.0525 0.241 Mono L1
ENSG00000118503 TNFAIP3 160821 sc-eQTL 8.38e-01 -0.0112 0.0549 0.241 Mono L1
ENSG00000135540 NHSL1 -664536 sc-eQTL 4.73e-01 0.0713 0.0991 0.241 Mono L1
ENSG00000135597 REPS1 -960226 sc-eQTL 4.06e-01 -0.0483 0.058 0.241 Mono L1
ENSG00000225177 AL590617.2 -664513 sc-eQTL 2.95e-01 -0.108 0.103 0.241 Mono L1
ENSG00000237499 WAKMAR2 159802 sc-eQTL 8.15e-01 -0.016 0.0681 0.241 Mono L1
ENSG00000024862 CCDC28A -745474 sc-eQTL 5.56e-01 -0.0552 0.0935 0.242 NK L1
ENSG00000027697 IFNGR1 808586 sc-eQTL 7.78e-01 0.0203 0.0719 0.242 NK L1
ENSG00000051620 HEBP2 -375496 sc-eQTL 5.75e-01 -0.0462 0.0824 0.242 NK L1
ENSG00000112378 PERP -79384 sc-eQTL 1.73e-01 0.0952 0.0697 0.242 NK L1
ENSG00000118503 TNFAIP3 160821 sc-eQTL 3.83e-01 0.0523 0.0598 0.242 NK L1
ENSG00000135597 REPS1 -960226 sc-eQTL 4.90e-02 0.151 0.0763 0.242 NK L1
ENSG00000237499 WAKMAR2 159802 sc-eQTL 3.15e-01 0.0854 0.0847 0.242 NK L1
ENSG00000024862 CCDC28A -745474 sc-eQTL 1.81e-01 -0.147 0.109 0.241 Other_T L1
ENSG00000027697 IFNGR1 808586 sc-eQTL 7.73e-01 0.0193 0.0668 0.241 Other_T L1
ENSG00000051620 HEBP2 -375496 sc-eQTL 3.65e-01 -0.0642 0.0707 0.241 Other_T L1
ENSG00000112378 PERP -79384 sc-eQTL 7.87e-01 0.0236 0.0874 0.241 Other_T L1
ENSG00000118503 TNFAIP3 160821 sc-eQTL 9.71e-01 0.00151 0.0416 0.241 Other_T L1
ENSG00000135597 REPS1 -960226 sc-eQTL 4.87e-01 0.0594 0.0853 0.241 Other_T L1
ENSG00000237499 WAKMAR2 159802 sc-eQTL 5.50e-01 0.0493 0.0824 0.241 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -745474 sc-eQTL 9.38e-01 0.00997 0.127 0.227 B_Activated L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 6.26e-01 -0.0556 0.114 0.227 B_Activated L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 4.15e-01 0.091 0.111 0.227 B_Activated L2
ENSG00000112378 PERP -79384 sc-eQTL 9.28e-01 0.00525 0.058 0.227 B_Activated L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 4.31e-01 0.0886 0.112 0.227 B_Activated L2
ENSG00000135597 REPS1 -960226 sc-eQTL 6.57e-01 -0.0565 0.127 0.227 B_Activated L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 4.77e-01 0.0698 0.0981 0.227 B_Activated L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 1.25e-01 0.164 0.107 0.242 B_Intermediate L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 2.45e-01 -0.115 0.0989 0.242 B_Intermediate L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 9.94e-01 -0.000602 0.0744 0.242 B_Intermediate L2
ENSG00000112378 PERP -79384 sc-eQTL 2.14e-01 -0.118 0.0943 0.242 B_Intermediate L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 9.70e-01 -0.0028 0.0743 0.242 B_Intermediate L2
ENSG00000135597 REPS1 -960226 sc-eQTL 9.48e-01 0.00659 0.1 0.242 B_Intermediate L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 2.46e-01 0.122 0.105 0.242 B_Intermediate L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 4.41e-01 -0.0843 0.109 0.241 B_Memory L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 8.19e-01 -0.0247 0.108 0.241 B_Memory L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 7.61e-01 -0.0251 0.0823 0.241 B_Memory L2
ENSG00000112378 PERP -79384 sc-eQTL 7.19e-01 -0.0369 0.103 0.241 B_Memory L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 6.84e-01 -0.0288 0.0706 0.241 B_Memory L2
ENSG00000135597 REPS1 -960226 sc-eQTL 8.24e-01 -0.0228 0.102 0.241 B_Memory L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 9.15e-01 0.0112 0.105 0.241 B_Memory L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 2.96e-01 0.107 0.102 0.241 B_Naive1 L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 9.49e-02 -0.141 0.0843 0.241 B_Naive1 L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 1.96e-01 -0.0934 0.0719 0.241 B_Naive1 L2
ENSG00000112378 PERP -79384 sc-eQTL 4.70e-01 -0.0709 0.0978 0.241 B_Naive1 L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 5.38e-01 -0.035 0.0568 0.241 B_Naive1 L2
ENSG00000135597 REPS1 -960226 sc-eQTL 1.92e-01 0.108 0.0826 0.241 B_Naive1 L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 3.96e-01 -0.0756 0.0888 0.241 B_Naive1 L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 9.90e-02 -0.166 0.1 0.242 B_Naive2 L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 9.41e-01 0.00776 0.104 0.242 B_Naive2 L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 7.00e-02 -0.125 0.0685 0.242 B_Naive2 L2
ENSG00000112378 PERP -79384 sc-eQTL 6.30e-01 0.04 0.0829 0.242 B_Naive2 L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 9.62e-01 -0.00391 0.0829 0.242 B_Naive2 L2
ENSG00000135597 REPS1 -960226 sc-eQTL 8.57e-01 -0.0164 0.0906 0.242 B_Naive2 L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 4.89e-01 -0.0742 0.107 0.242 B_Naive2 L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 6.52e-01 0.0466 0.103 0.245 CD4_CTL L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 3.44e-01 -0.0914 0.0963 0.245 CD4_CTL L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 8.13e-02 -0.155 0.0883 0.245 CD4_CTL L2
ENSG00000112378 PERP -79384 sc-eQTL 1.68e-01 -0.149 0.108 0.245 CD4_CTL L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 2.13e-01 -0.0788 0.063 0.245 CD4_CTL L2
ENSG00000135597 REPS1 -960226 sc-eQTL 6.87e-01 0.0407 0.101 0.245 CD4_CTL L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 6.67e-01 -0.0424 0.0984 0.245 CD4_CTL L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 1.16e-01 -0.156 0.099 0.241 CD4_Naive L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 3.37e-01 -0.0506 0.0525 0.241 CD4_Naive L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 2.90e-01 -0.0656 0.0619 0.241 CD4_Naive L2
ENSG00000112378 PERP -79384 sc-eQTL 8.69e-01 0.0136 0.082 0.241 CD4_Naive L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 6.84e-01 0.0235 0.0575 0.241 CD4_Naive L2
ENSG00000135597 REPS1 -960226 sc-eQTL 1.94e-01 0.0891 0.0684 0.241 CD4_Naive L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 2.91e-01 -0.0787 0.0743 0.241 CD4_Naive L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 9.56e-02 -0.163 0.0974 0.241 CD4_TCM L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 1.52e-01 -0.106 0.0734 0.241 CD4_TCM L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 1.99e-02 -0.169 0.072 0.241 CD4_TCM L2
ENSG00000112378 PERP -79384 sc-eQTL 5.72e-01 0.0517 0.0914 0.241 CD4_TCM L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 7.92e-01 0.014 0.0531 0.241 CD4_TCM L2
ENSG00000135597 REPS1 -960226 sc-eQTL 5.03e-01 0.0499 0.0743 0.241 CD4_TCM L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 6.66e-01 -0.0322 0.0744 0.241 CD4_TCM L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 7.67e-01 0.0328 0.11 0.241 CD4_TEM L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 1.07e-01 -0.134 0.083 0.241 CD4_TEM L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 5.90e-02 -0.141 0.0745 0.241 CD4_TEM L2
ENSG00000112378 PERP -79384 sc-eQTL 7.63e-01 0.0264 0.0873 0.241 CD4_TEM L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 2.09e-01 0.0697 0.0553 0.241 CD4_TEM L2
ENSG00000135597 REPS1 -960226 sc-eQTL 4.21e-01 0.0753 0.0933 0.241 CD4_TEM L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 7.01e-01 -0.0342 0.0889 0.241 CD4_TEM L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 6.52e-01 0.0514 0.114 0.241 CD8_CTL L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 6.74e-01 -0.0323 0.0766 0.241 CD8_CTL L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 2.66e-01 -0.0903 0.081 0.241 CD8_CTL L2
ENSG00000112378 PERP -79384 sc-eQTL 2.28e-02 0.23 0.1 0.241 CD8_CTL L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 9.88e-01 -0.000941 0.0645 0.241 CD8_CTL L2
ENSG00000135597 REPS1 -960226 sc-eQTL 3.54e-01 0.0822 0.0885 0.241 CD8_CTL L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 5.69e-01 0.0517 0.0906 0.241 CD8_CTL L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 3.42e-02 -0.229 0.108 0.241 CD8_Naive L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 1.21e-02 -0.189 0.0747 0.241 CD8_Naive L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 3.97e-01 -0.0589 0.0694 0.241 CD8_Naive L2
ENSG00000112378 PERP -79384 sc-eQTL 7.97e-01 -0.0215 0.0835 0.241 CD8_Naive L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 6.94e-01 0.0233 0.0593 0.241 CD8_Naive L2
ENSG00000135597 REPS1 -960226 sc-eQTL 7.81e-01 0.0234 0.0841 0.241 CD8_Naive L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 5.48e-01 -0.0527 0.0876 0.241 CD8_Naive L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 9.42e-01 0.00878 0.121 0.248 CD8_TCM L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 3.67e-01 -0.09 0.0995 0.248 CD8_TCM L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 4.10e-01 -0.07 0.0847 0.248 CD8_TCM L2
ENSG00000112378 PERP -79384 sc-eQTL 2.24e-01 -0.136 0.112 0.248 CD8_TCM L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 7.40e-01 -0.018 0.054 0.248 CD8_TCM L2
ENSG00000135597 REPS1 -960226 sc-eQTL 1.04e-01 0.149 0.0912 0.248 CD8_TCM L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 8.25e-01 0.0219 0.0989 0.248 CD8_TCM L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 7.59e-01 -0.0338 0.11 0.233 CD8_TEM L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 6.02e-01 0.0499 0.0954 0.233 CD8_TEM L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 5.51e-01 -0.0599 0.1 0.233 CD8_TEM L2
ENSG00000112378 PERP -79384 sc-eQTL 7.67e-01 -0.034 0.114 0.233 CD8_TEM L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 6.68e-01 -0.0302 0.0704 0.233 CD8_TEM L2
ENSG00000135597 REPS1 -960226 sc-eQTL 6.98e-01 -0.0418 0.107 0.233 CD8_TEM L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 4.38e-01 0.0811 0.104 0.233 CD8_TEM L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 3.87e-01 -0.102 0.118 0.24 MAIT L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 9.72e-01 0.0027 0.0769 0.24 MAIT L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 2.60e-01 -0.0925 0.0819 0.24 MAIT L2
ENSG00000112378 PERP -79384 sc-eQTL 8.78e-01 -0.0168 0.109 0.24 MAIT L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 2.00e-01 0.0663 0.0515 0.24 MAIT L2
ENSG00000135597 REPS1 -960226 sc-eQTL 8.68e-01 0.0161 0.0969 0.24 MAIT L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 4.18e-01 0.0776 0.0955 0.24 MAIT L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 6.96e-01 0.0427 0.109 0.244 NK_CD56bright L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 8.04e-01 0.0211 0.0851 0.244 NK_CD56bright L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 9.71e-01 0.00342 0.0929 0.244 NK_CD56bright L2
ENSG00000112378 PERP -79384 sc-eQTL 3.14e-01 -0.1 0.0991 0.244 NK_CD56bright L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 9.59e-01 0.0033 0.0634 0.244 NK_CD56bright L2
ENSG00000135597 REPS1 -960226 sc-eQTL 7.90e-01 -0.0246 0.0922 0.244 NK_CD56bright L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 1.64e-01 0.14 0.101 0.244 NK_CD56bright L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 1.78e-01 -0.135 0.1 0.244 NK_CD56dim L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 6.34e-01 0.0315 0.066 0.244 NK_CD56dim L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 9.07e-01 -0.0104 0.0891 0.244 NK_CD56dim L2
ENSG00000112378 PERP -79384 sc-eQTL 3.49e-01 0.0748 0.0797 0.244 NK_CD56dim L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 1.00e-01 0.102 0.0617 0.244 NK_CD56dim L2
ENSG00000135597 REPS1 -960226 sc-eQTL 2.93e-01 0.0862 0.0817 0.244 NK_CD56dim L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 1.02e-01 0.152 0.0925 0.244 NK_CD56dim L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 9.13e-01 0.0126 0.116 0.247 NK_HLA L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 2.53e-01 -0.0969 0.0846 0.247 NK_HLA L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 7.47e-01 0.0318 0.0984 0.247 NK_HLA L2
ENSG00000112378 PERP -79384 sc-eQTL 1.01e-01 0.143 0.0869 0.247 NK_HLA L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 6.14e-01 -0.034 0.0672 0.247 NK_HLA L2
ENSG00000135597 REPS1 -960226 sc-eQTL 6.72e-02 0.195 0.106 0.247 NK_HLA L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 2.64e-01 -0.121 0.108 0.247 NK_HLA L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 4.71e-01 -0.0743 0.103 0.244 NK_cytokine L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 8.67e-01 -0.0116 0.0695 0.244 NK_cytokine L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 1.00e-01 -0.146 0.0883 0.244 NK_cytokine L2
ENSG00000112378 PERP -79384 sc-eQTL 9.85e-02 0.137 0.0823 0.244 NK_cytokine L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 3.07e-01 0.0635 0.0619 0.244 NK_cytokine L2
ENSG00000135597 REPS1 -960226 sc-eQTL 2.99e-01 0.0952 0.0915 0.244 NK_cytokine L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 8.73e-01 0.015 0.0936 0.244 NK_cytokine L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 3.38e-01 -0.119 0.124 0.237 PB L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 2.20e-02 -0.298 0.128 0.237 PB L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 1.45e-01 -0.161 0.11 0.237 PB L2
ENSG00000112378 PERP -79384 sc-eQTL 1.95e-01 -0.109 0.0837 0.237 PB L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 9.32e-02 0.171 0.101 0.237 PB L2
ENSG00000135597 REPS1 -960226 sc-eQTL 7.19e-01 0.0434 0.12 0.237 PB L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 4.99e-01 0.0832 0.123 0.237 PB L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 1.07e-01 -0.185 0.114 0.243 Pro_T L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 2.21e-01 -0.107 0.0874 0.243 Pro_T L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 8.15e-01 -0.0215 0.0917 0.243 Pro_T L2
ENSG00000112378 PERP -79384 sc-eQTL 1.25e-01 0.13 0.0843 0.243 Pro_T L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 2.70e-01 0.059 0.0533 0.243 Pro_T L2
ENSG00000135597 REPS1 -960226 sc-eQTL 7.68e-01 0.0315 0.107 0.243 Pro_T L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 6.05e-01 0.0537 0.104 0.243 Pro_T L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 3.25e-01 -0.105 0.107 0.241 Treg L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 4.99e-01 0.0681 0.101 0.241 Treg L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 8.43e-01 -0.0145 0.073 0.241 Treg L2
ENSG00000112378 PERP -79384 sc-eQTL 6.25e-01 -0.0563 0.115 0.241 Treg L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 5.13e-01 0.0419 0.0639 0.241 Treg L2
ENSG00000135597 REPS1 -960226 sc-eQTL 2.24e-01 0.112 0.0916 0.241 Treg L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 1.93e-01 0.127 0.0972 0.241 Treg L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 6.56e-01 -0.0473 0.106 0.246 cDC L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 1.57e-01 -0.122 0.0859 0.246 cDC L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 4.68e-01 -0.0553 0.0759 0.246 cDC L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 1.10e-01 0.136 0.0845 0.246 cDC L2
ENSG00000135540 NHSL1 -664536 sc-eQTL 5.72e-01 -0.0558 0.0986 0.246 cDC L2
ENSG00000135597 REPS1 -960226 sc-eQTL 5.78e-01 -0.0633 0.114 0.246 cDC L2
ENSG00000225177 AL590617.2 -664513 sc-eQTL 3.62e-01 -0.0992 0.109 0.246 cDC L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 8.12e-02 -0.193 0.11 0.246 cDC L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 4.60e-02 -0.165 0.0822 0.241 cMono_IL1B L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 4.89e-01 -0.0419 0.0604 0.241 cMono_IL1B L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 6.88e-01 0.024 0.0596 0.241 cMono_IL1B L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 5.91e-01 0.035 0.0651 0.241 cMono_IL1B L2
ENSG00000135540 NHSL1 -664536 sc-eQTL 4.34e-01 0.0782 0.0997 0.241 cMono_IL1B L2
ENSG00000135597 REPS1 -960226 sc-eQTL 4.75e-01 -0.0637 0.089 0.241 cMono_IL1B L2
ENSG00000225177 AL590617.2 -664513 sc-eQTL 2.09e-01 -0.131 0.104 0.241 cMono_IL1B L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 6.64e-01 -0.0302 0.0695 0.241 cMono_IL1B L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 7.85e-01 0.0262 0.0959 0.241 cMono_S100A L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 4.97e-01 -0.0479 0.0704 0.241 cMono_S100A L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 3.62e-01 -0.0598 0.0655 0.241 cMono_S100A L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 8.72e-01 0.0101 0.0626 0.241 cMono_S100A L2
ENSG00000135540 NHSL1 -664536 sc-eQTL 9.81e-01 -0.00247 0.103 0.241 cMono_S100A L2
ENSG00000135597 REPS1 -960226 sc-eQTL 9.40e-01 0.00735 0.0972 0.241 cMono_S100A L2
ENSG00000225177 AL590617.2 -664513 sc-eQTL 5.95e-01 0.0598 0.112 0.241 cMono_S100A L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 6.91e-01 0.0358 0.0898 0.241 cMono_S100A L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 5.12e-01 -0.0849 0.129 0.255 gdT L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 8.25e-01 -0.0229 0.103 0.255 gdT L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 2.11e-01 -0.154 0.123 0.255 gdT L2
ENSG00000112378 PERP -79384 sc-eQTL 9.72e-01 0.00404 0.114 0.255 gdT L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 7.31e-01 -0.0219 0.0636 0.255 gdT L2
ENSG00000135597 REPS1 -960226 sc-eQTL 3.49e-01 0.119 0.127 0.255 gdT L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 8.25e-01 0.0255 0.115 0.255 gdT L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 3.18e-01 -0.112 0.112 0.244 intMono L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 4.09e-01 -0.0624 0.0754 0.244 intMono L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 9.47e-01 0.00499 0.0753 0.244 intMono L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 4.90e-01 0.045 0.0651 0.244 intMono L2
ENSG00000135540 NHSL1 -664536 sc-eQTL 6.77e-01 0.0423 0.101 0.244 intMono L2
ENSG00000135597 REPS1 -960226 sc-eQTL 6.63e-01 0.0458 0.105 0.244 intMono L2
ENSG00000225177 AL590617.2 -664513 sc-eQTL 1.52e-01 -0.163 0.113 0.244 intMono L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 9.99e-01 0.000101 0.0972 0.244 intMono L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 3.52e-02 -0.22 0.104 0.242 ncMono L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 4.98e-01 0.0606 0.0893 0.242 ncMono L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 6.59e-01 -0.0277 0.0626 0.242 ncMono L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 7.22e-01 0.0282 0.0791 0.242 ncMono L2
ENSG00000135540 NHSL1 -664536 sc-eQTL 8.73e-01 0.0162 0.101 0.242 ncMono L2
ENSG00000135597 REPS1 -960226 sc-eQTL 7.77e-01 -0.0216 0.0761 0.242 ncMono L2
ENSG00000225177 AL590617.2 -664513 sc-eQTL 7.34e-01 0.0381 0.112 0.242 ncMono L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 6.95e-01 0.0388 0.0989 0.242 ncMono L2
ENSG00000024862 CCDC28A -745474 sc-eQTL 4.63e-01 -0.0861 0.117 0.251 pDC L2
ENSG00000027697 IFNGR1 808586 sc-eQTL 3.48e-01 -0.0933 0.0992 0.251 pDC L2
ENSG00000051620 HEBP2 -375496 sc-eQTL 9.50e-01 -0.00571 0.0912 0.251 pDC L2
ENSG00000118503 TNFAIP3 160821 sc-eQTL 3.92e-01 0.0791 0.0921 0.251 pDC L2
ENSG00000135540 NHSL1 -664536 sc-eQTL 6.04e-01 0.0472 0.0907 0.251 pDC L2
ENSG00000135597 REPS1 -960226 sc-eQTL 7.05e-01 -0.0349 0.0919 0.251 pDC L2
ENSG00000225177 AL590617.2 -664513 sc-eQTL 8.46e-02 -0.157 0.0903 0.251 pDC L2
ENSG00000237499 WAKMAR2 159802 sc-eQTL 3.30e-01 -0.0912 0.0934 0.251 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -745474 sc-eQTL 1.66e-01 0.143 0.103 0.241 B_Memory LOneK1K
ENSG00000027697 IFNGR1 808586 sc-eQTL 2.59e-01 -0.0993 0.0878 0.241 B_Memory LOneK1K
ENSG00000051620 HEBP2 -375496 sc-eQTL 9.10e-01 -0.00807 0.0715 0.241 B_Memory LOneK1K
ENSG00000112378 PERP -79384 sc-eQTL 3.12e-01 -0.0952 0.0939 0.241 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 160821 sc-eQTL 7.92e-01 -0.0164 0.0622 0.241 B_Memory LOneK1K
ENSG00000135597 REPS1 -960226 sc-eQTL 9.50e-01 -0.006 0.0952 0.241 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 159802 sc-eQTL 3.07e-01 0.107 0.105 0.241 B_Memory LOneK1K
ENSG00000024862 CCDC28A -745474 sc-eQTL 8.08e-01 -0.0233 0.0959 0.241 B_Naive LOneK1K
ENSG00000027697 IFNGR1 808586 sc-eQTL 1.20e-01 -0.139 0.0892 0.241 B_Naive LOneK1K
ENSG00000051620 HEBP2 -375496 sc-eQTL 1.14e-01 -0.105 0.0661 0.241 B_Naive LOneK1K
ENSG00000112378 PERP -79384 sc-eQTL 7.65e-01 -0.0293 0.0977 0.241 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 160821 sc-eQTL 5.90e-01 -0.0277 0.0513 0.241 B_Naive LOneK1K
ENSG00000135597 REPS1 -960226 sc-eQTL 2.95e-01 0.08 0.0763 0.241 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 159802 sc-eQTL 2.54e-01 -0.104 0.0911 0.241 B_Naive LOneK1K
ENSG00000024862 CCDC28A -745474 sc-eQTL 3.10e-01 -0.0777 0.0764 0.241 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 808586 sc-eQTL 3.53e-01 -0.0566 0.0609 0.241 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -375496 sc-eQTL 6.32e-01 0.0274 0.0571 0.241 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 160821 sc-eQTL 8.86e-01 0.00808 0.0564 0.241 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -664536 sc-eQTL 5.90e-01 0.0541 0.1 0.241 CD14_Mono LOneK1K
ENSG00000135597 REPS1 -960226 sc-eQTL 7.06e-01 -0.0312 0.0826 0.241 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -664513 sc-eQTL 3.48e-01 -0.101 0.108 0.241 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 159802 sc-eQTL 8.31e-01 -0.0145 0.0676 0.241 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A -745474 sc-eQTL 7.64e-02 -0.182 0.102 0.244 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 808586 sc-eQTL 6.02e-01 -0.0376 0.072 0.244 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -375496 sc-eQTL 4.35e-01 -0.043 0.0549 0.244 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 160821 sc-eQTL 1.75e-01 0.0912 0.0671 0.244 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -664536 sc-eQTL 2.81e-01 0.105 0.0975 0.244 CD16_Mono LOneK1K
ENSG00000135597 REPS1 -960226 sc-eQTL 6.82e-01 -0.025 0.0609 0.244 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -664513 sc-eQTL 2.70e-01 -0.119 0.108 0.244 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 159802 sc-eQTL 6.78e-01 -0.0375 0.0902 0.244 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A -745474 sc-eQTL 2.89e-01 -0.103 0.0965 0.244 NK_CD56dim LOneK1K
ENSG00000027697 IFNGR1 808586 sc-eQTL 8.14e-01 0.0159 0.0676 0.244 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -375496 sc-eQTL 5.23e-01 -0.0537 0.0838 0.244 NK_CD56dim LOneK1K
ENSG00000112378 PERP -79384 sc-eQTL 1.00e-01 0.116 0.0703 0.244 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 160821 sc-eQTL 3.19e-01 0.0614 0.0615 0.244 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 -960226 sc-eQTL 6.62e-02 0.148 0.08 0.244 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 159802 sc-eQTL 3.71e-01 0.0772 0.0861 0.244 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000051620 HEBP2 -375496 eQTL 0.0442 -0.0451 0.0224 0.0 0.0 0.244

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina