Genes within 1Mb (chr6:137996859:C:T):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -776650 sc-eQTL 5.54e-01 -0.0499 0.0842 0.788 B L1
ENSG00000027697 IFNGR1 777410 sc-eQTL 4.51e-01 -0.0618 0.0819 0.788 B L1
ENSG00000051620 HEBP2 -406672 sc-eQTL 6.52e-02 0.118 0.0638 0.788 B L1
ENSG00000112378 PERP -110560 sc-eQTL 7.70e-01 0.0188 0.0642 0.788 B L1
ENSG00000118503 TNFAIP3 129645 sc-eQTL 1.11e-01 0.0823 0.0514 0.788 B L1
ENSG00000135597 REPS1 -991402 sc-eQTL 9.52e-01 0.00434 0.0724 0.788 B L1
ENSG00000237499 WAKMAR2 128626 sc-eQTL 7.15e-01 0.0297 0.0814 0.788 B L1
ENSG00000024862 CCDC28A -776650 sc-eQTL 4.10e-01 0.077 0.0932 0.788 CD4T L1
ENSG00000027697 IFNGR1 777410 sc-eQTL 4.23e-01 -0.0437 0.0545 0.788 CD4T L1
ENSG00000051620 HEBP2 -406672 sc-eQTL 2.56e-02 0.139 0.0619 0.788 CD4T L1
ENSG00000112378 PERP -110560 sc-eQTL 8.04e-01 -0.0147 0.0591 0.788 CD4T L1
ENSG00000118503 TNFAIP3 129645 sc-eQTL 2.57e-01 0.0627 0.0552 0.788 CD4T L1
ENSG00000135597 REPS1 -991402 sc-eQTL 4.98e-02 -0.12 0.0606 0.788 CD4T L1
ENSG00000237499 WAKMAR2 128626 sc-eQTL 3.88e-01 0.0601 0.0696 0.788 CD4T L1
ENSG00000024862 CCDC28A -776650 sc-eQTL 1.18e-02 0.256 0.101 0.788 CD8T L1
ENSG00000027697 IFNGR1 777410 sc-eQTL 1.24e-01 -0.0961 0.0622 0.788 CD8T L1
ENSG00000051620 HEBP2 -406672 sc-eQTL 1.43e-01 0.098 0.0666 0.788 CD8T L1
ENSG00000112378 PERP -110560 sc-eQTL 9.46e-01 0.00464 0.0682 0.788 CD8T L1
ENSG00000118503 TNFAIP3 129645 sc-eQTL 6.29e-01 0.0255 0.0526 0.788 CD8T L1
ENSG00000135597 REPS1 -991402 sc-eQTL 4.28e-01 0.0546 0.0688 0.788 CD8T L1
ENSG00000237499 WAKMAR2 128626 sc-eQTL 2.22e-01 -0.0943 0.0771 0.788 CD8T L1
ENSG00000024862 CCDC28A -776650 sc-eQTL 3.41e-01 -0.1 0.105 0.793 DC L1
ENSG00000027697 IFNGR1 777410 sc-eQTL 3.60e-01 -0.0716 0.078 0.793 DC L1
ENSG00000051620 HEBP2 -406672 sc-eQTL 2.03e-01 0.0943 0.0738 0.793 DC L1
ENSG00000118503 TNFAIP3 129645 sc-eQTL 7.37e-02 0.149 0.0829 0.793 DC L1
ENSG00000135540 NHSL1 -695712 sc-eQTL 1.18e-02 -0.242 0.0951 0.793 DC L1
ENSG00000135597 REPS1 -991402 sc-eQTL 1.06e-01 0.138 0.0849 0.793 DC L1
ENSG00000225177 AL590617.2 -695689 sc-eQTL 8.37e-01 0.0208 0.101 0.793 DC L1
ENSG00000237499 WAKMAR2 128626 sc-eQTL 3.58e-02 0.178 0.0842 0.793 DC L1
ENSG00000024862 CCDC28A -776650 sc-eQTL 3.94e-01 0.0639 0.0748 0.788 Mono L1
ENSG00000027697 IFNGR1 777410 sc-eQTL 6.14e-01 -0.0322 0.0638 0.788 Mono L1
ENSG00000051620 HEBP2 -406672 sc-eQTL 1.82e-02 0.122 0.0511 0.788 Mono L1
ENSG00000118503 TNFAIP3 129645 sc-eQTL 7.27e-01 -0.0189 0.0542 0.788 Mono L1
ENSG00000135540 NHSL1 -695712 sc-eQTL 1.55e-01 0.139 0.0974 0.788 Mono L1
ENSG00000135597 REPS1 -991402 sc-eQTL 5.58e-01 0.0336 0.0573 0.788 Mono L1
ENSG00000225177 AL590617.2 -695689 sc-eQTL 1.68e-01 0.14 0.101 0.788 Mono L1
ENSG00000237499 WAKMAR2 128626 sc-eQTL 5.97e-01 0.0355 0.0671 0.788 Mono L1
ENSG00000024862 CCDC28A -776650 sc-eQTL 4.24e-01 0.0739 0.0923 0.788 NK L1
ENSG00000027697 IFNGR1 777410 sc-eQTL 4.81e-01 -0.0501 0.071 0.788 NK L1
ENSG00000051620 HEBP2 -406672 sc-eQTL 3.77e-01 0.0719 0.0813 0.788 NK L1
ENSG00000112378 PERP -110560 sc-eQTL 9.45e-01 0.00479 0.0691 0.788 NK L1
ENSG00000118503 TNFAIP3 129645 sc-eQTL 3.46e-01 0.0558 0.059 0.788 NK L1
ENSG00000135597 REPS1 -991402 sc-eQTL 3.42e-01 -0.0723 0.0759 0.788 NK L1
ENSG00000237499 WAKMAR2 128626 sc-eQTL 9.43e-01 0.00598 0.0838 0.788 NK L1
ENSG00000024862 CCDC28A -776650 sc-eQTL 5.36e-01 -0.0684 0.11 0.788 Other_T L1
ENSG00000027697 IFNGR1 777410 sc-eQTL 3.50e-02 -0.141 0.0665 0.788 Other_T L1
ENSG00000051620 HEBP2 -406672 sc-eQTL 3.70e-02 0.148 0.0706 0.788 Other_T L1
ENSG00000112378 PERP -110560 sc-eQTL 8.11e-01 0.0211 0.088 0.788 Other_T L1
ENSG00000118503 TNFAIP3 129645 sc-eQTL 1.30e-01 0.0633 0.0416 0.788 Other_T L1
ENSG00000135597 REPS1 -991402 sc-eQTL 2.98e-01 0.0894 0.0857 0.788 Other_T L1
ENSG00000237499 WAKMAR2 128626 sc-eQTL 9.87e-01 -0.00139 0.0831 0.788 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -776650 sc-eQTL 6.69e-01 -0.053 0.124 0.788 B_Activated L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 8.60e-01 -0.0196 0.111 0.788 B_Activated L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 6.83e-01 -0.0444 0.108 0.788 B_Activated L2
ENSG00000112378 PERP -110560 sc-eQTL 7.41e-01 0.0187 0.0563 0.788 B_Activated L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 8.16e-01 0.0255 0.109 0.788 B_Activated L2
ENSG00000135597 REPS1 -991402 sc-eQTL 5.79e-01 -0.0686 0.123 0.788 B_Activated L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 7.73e-01 0.0275 0.0954 0.788 B_Activated L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 4.62e-01 0.0774 0.105 0.788 B_Intermediate L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 3.96e-01 0.0825 0.097 0.788 B_Intermediate L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 1.77e-01 0.0982 0.0725 0.788 B_Intermediate L2
ENSG00000112378 PERP -110560 sc-eQTL 8.76e-01 -0.0144 0.0927 0.788 B_Intermediate L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 2.61e-01 0.0818 0.0725 0.788 B_Intermediate L2
ENSG00000135597 REPS1 -991402 sc-eQTL 3.75e-01 0.0871 0.098 0.788 B_Intermediate L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 3.65e-01 -0.0934 0.103 0.788 B_Intermediate L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 2.63e-01 -0.119 0.106 0.789 B_Memory L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 4.07e-01 -0.0867 0.104 0.789 B_Memory L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 2.93e-02 0.173 0.0788 0.789 B_Memory L2
ENSG00000112378 PERP -110560 sc-eQTL 8.17e-01 -0.023 0.0994 0.789 B_Memory L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 6.90e-01 0.0273 0.0684 0.789 B_Memory L2
ENSG00000135597 REPS1 -991402 sc-eQTL 4.21e-01 0.0799 0.0991 0.789 B_Memory L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 8.16e-01 -0.0237 0.102 0.789 B_Memory L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 1.03e-01 -0.164 0.1 0.788 B_Naive1 L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 6.83e-01 0.034 0.0831 0.788 B_Naive1 L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 2.36e-01 0.0837 0.0705 0.788 B_Naive1 L2
ENSG00000112378 PERP -110560 sc-eQTL 9.36e-01 0.00777 0.0959 0.788 B_Naive1 L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 2.96e-01 0.0581 0.0555 0.788 B_Naive1 L2
ENSG00000135597 REPS1 -991402 sc-eQTL 6.89e-01 0.0325 0.0811 0.788 B_Naive1 L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 1.88e-01 0.115 0.0868 0.788 B_Naive1 L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 9.10e-01 -0.0112 0.0994 0.788 B_Naive2 L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 3.72e-01 -0.0916 0.102 0.788 B_Naive2 L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 2.82e-01 0.0732 0.0678 0.788 B_Naive2 L2
ENSG00000112378 PERP -110560 sc-eQTL 9.74e-01 0.00263 0.0817 0.788 B_Naive2 L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 9.70e-01 0.00308 0.0817 0.788 B_Naive2 L2
ENSG00000135597 REPS1 -991402 sc-eQTL 6.65e-01 -0.0388 0.0893 0.788 B_Naive2 L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 4.12e-01 -0.0866 0.105 0.788 B_Naive2 L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 2.88e-01 0.112 0.105 0.795 CD4_CTL L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 5.16e-01 -0.0642 0.0987 0.795 CD4_CTL L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 1.17e-02 0.228 0.0897 0.795 CD4_CTL L2
ENSG00000112378 PERP -110560 sc-eQTL 7.16e-01 0.0404 0.111 0.795 CD4_CTL L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 9.05e-01 0.00777 0.0648 0.795 CD4_CTL L2
ENSG00000135597 REPS1 -991402 sc-eQTL 9.43e-01 -0.00742 0.103 0.795 CD4_CTL L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 3.34e-01 0.0973 0.101 0.795 CD4_CTL L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 6.61e-01 -0.0432 0.0982 0.788 CD4_Naive L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 9.13e-01 0.0057 0.0519 0.788 CD4_Naive L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 1.13e-02 0.154 0.0603 0.788 CD4_Naive L2
ENSG00000112378 PERP -110560 sc-eQTL 7.50e-01 -0.0258 0.0809 0.788 CD4_Naive L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 4.79e-01 0.0403 0.0567 0.788 CD4_Naive L2
ENSG00000135597 REPS1 -991402 sc-eQTL 5.05e-02 -0.132 0.0671 0.788 CD4_Naive L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 6.81e-01 0.0303 0.0735 0.788 CD4_Naive L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 7.36e-02 0.171 0.0951 0.788 CD4_TCM L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 4.67e-01 -0.0525 0.072 0.788 CD4_TCM L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 1.81e-01 0.0954 0.071 0.788 CD4_TCM L2
ENSG00000112378 PERP -110560 sc-eQTL 8.93e-01 -0.012 0.0895 0.788 CD4_TCM L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 2.46e-01 0.0603 0.0518 0.788 CD4_TCM L2
ENSG00000135597 REPS1 -991402 sc-eQTL 6.28e-02 -0.135 0.0721 0.788 CD4_TCM L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 5.21e-02 0.141 0.0722 0.788 CD4_TCM L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 9.50e-01 -0.00676 0.108 0.788 CD4_TEM L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 6.78e-02 -0.149 0.081 0.788 CD4_TEM L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 8.51e-02 0.126 0.0729 0.788 CD4_TEM L2
ENSG00000112378 PERP -110560 sc-eQTL 8.82e-01 -0.0127 0.0854 0.788 CD4_TEM L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 2.38e-01 0.064 0.0541 0.788 CD4_TEM L2
ENSG00000135597 REPS1 -991402 sc-eQTL 1.30e-01 0.138 0.0909 0.788 CD4_TEM L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 7.91e-01 -0.0231 0.0869 0.788 CD4_TEM L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 8.92e-01 0.0156 0.115 0.788 CD8_CTL L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 2.03e-01 -0.0988 0.0773 0.788 CD8_CTL L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 7.51e-01 0.0261 0.0823 0.788 CD8_CTL L2
ENSG00000112378 PERP -110560 sc-eQTL 7.54e-01 0.0322 0.103 0.788 CD8_CTL L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 7.48e-01 -0.021 0.0653 0.788 CD8_CTL L2
ENSG00000135597 REPS1 -991402 sc-eQTL 9.52e-01 -0.00537 0.0898 0.788 CD8_CTL L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 4.82e-01 -0.0646 0.0917 0.788 CD8_CTL L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 3.40e-02 0.225 0.105 0.788 CD8_Naive L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 5.02e-01 -0.0498 0.0742 0.788 CD8_Naive L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 7.16e-03 0.182 0.0669 0.788 CD8_Naive L2
ENSG00000112378 PERP -110560 sc-eQTL 6.04e-01 -0.0425 0.0818 0.788 CD8_Naive L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 6.16e-01 0.0291 0.058 0.788 CD8_Naive L2
ENSG00000135597 REPS1 -991402 sc-eQTL 8.06e-01 0.0202 0.0824 0.788 CD8_Naive L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 9.69e-01 0.00339 0.0859 0.788 CD8_Naive L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 7.08e-01 0.0441 0.118 0.787 CD8_TCM L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 2.35e-01 -0.115 0.0968 0.787 CD8_TCM L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 3.35e-01 0.0798 0.0825 0.787 CD8_TCM L2
ENSG00000112378 PERP -110560 sc-eQTL 3.24e-01 0.108 0.109 0.787 CD8_TCM L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 9.99e-01 4.19e-05 0.0527 0.787 CD8_TCM L2
ENSG00000135597 REPS1 -991402 sc-eQTL 3.82e-02 0.185 0.0885 0.787 CD8_TCM L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 2.49e-02 -0.215 0.0951 0.787 CD8_TCM L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 1.58e-01 0.155 0.109 0.779 CD8_TEM L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 3.85e-01 -0.0826 0.0949 0.779 CD8_TEM L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 9.18e-01 -0.0103 0.0998 0.779 CD8_TEM L2
ENSG00000112378 PERP -110560 sc-eQTL 9.80e-01 -0.00292 0.114 0.779 CD8_TEM L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 8.86e-01 -0.01 0.0701 0.779 CD8_TEM L2
ENSG00000135597 REPS1 -991402 sc-eQTL 9.74e-01 0.00355 0.107 0.779 CD8_TEM L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 6.16e-01 -0.0522 0.104 0.779 CD8_TEM L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 3.20e-01 -0.119 0.119 0.786 MAIT L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 3.18e-02 -0.165 0.0765 0.786 MAIT L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 8.90e-03 0.215 0.0813 0.786 MAIT L2
ENSG00000112378 PERP -110560 sc-eQTL 8.38e-01 0.0224 0.109 0.786 MAIT L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 5.16e-01 0.0338 0.052 0.786 MAIT L2
ENSG00000135597 REPS1 -991402 sc-eQTL 2.31e-01 0.117 0.0972 0.786 MAIT L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 8.20e-01 0.0219 0.0962 0.786 MAIT L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 4.59e-03 -0.303 0.106 0.789 NK_CD56bright L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 2.21e-04 -0.306 0.0813 0.789 NK_CD56bright L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 1.47e-01 0.133 0.0913 0.789 NK_CD56bright L2
ENSG00000112378 PERP -110560 sc-eQTL 3.71e-01 -0.0879 0.098 0.789 NK_CD56bright L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 1.03e-01 0.102 0.0622 0.789 NK_CD56bright L2
ENSG00000135597 REPS1 -991402 sc-eQTL 8.46e-01 0.0177 0.0911 0.789 NK_CD56bright L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 3.55e-01 -0.0923 0.0996 0.789 NK_CD56bright L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 2.28e-01 0.12 0.0992 0.791 NK_CD56dim L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 5.39e-01 -0.0402 0.0654 0.791 NK_CD56dim L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 4.37e-01 0.0687 0.0883 0.791 NK_CD56dim L2
ENSG00000112378 PERP -110560 sc-eQTL 5.56e-01 0.0467 0.0792 0.791 NK_CD56dim L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 5.07e-01 0.0409 0.0615 0.791 NK_CD56dim L2
ENSG00000135597 REPS1 -991402 sc-eQTL 4.61e-01 -0.0598 0.0811 0.791 NK_CD56dim L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 7.95e-01 0.024 0.0923 0.791 NK_CD56dim L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 8.61e-01 0.0203 0.116 0.792 NK_HLA L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 8.23e-01 0.0191 0.085 0.792 NK_HLA L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 4.19e-01 0.0796 0.0984 0.792 NK_HLA L2
ENSG00000112378 PERP -110560 sc-eQTL 7.76e-01 -0.025 0.0876 0.792 NK_HLA L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 3.20e-01 0.0669 0.0672 0.792 NK_HLA L2
ENSG00000135597 REPS1 -991402 sc-eQTL 8.01e-01 -0.027 0.107 0.792 NK_HLA L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 1.02e-01 0.177 0.108 0.792 NK_HLA L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 4.54e-02 0.205 0.102 0.791 NK_cytokine L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 7.23e-01 -0.0246 0.0692 0.791 NK_cytokine L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 7.56e-01 0.0275 0.0885 0.791 NK_cytokine L2
ENSG00000112378 PERP -110560 sc-eQTL 9.41e-01 0.00614 0.0824 0.791 NK_cytokine L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 3.95e-01 0.0525 0.0617 0.791 NK_cytokine L2
ENSG00000135597 REPS1 -991402 sc-eQTL 4.42e-01 -0.0703 0.0912 0.791 NK_cytokine L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 8.86e-01 0.0133 0.0931 0.791 NK_cytokine L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 2.00e-01 -0.155 0.121 0.804 PB L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 7.87e-01 -0.0348 0.128 0.804 PB L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 4.37e-01 -0.084 0.108 0.804 PB L2
ENSG00000112378 PERP -110560 sc-eQTL 1.61e-01 0.115 0.0815 0.804 PB L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 6.12e-01 0.0507 0.0996 0.804 PB L2
ENSG00000135597 REPS1 -991402 sc-eQTL 5.08e-01 -0.0779 0.117 0.804 PB L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 3.85e-01 0.104 0.119 0.804 PB L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 5.51e-01 0.067 0.112 0.787 Pro_T L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 4.29e-01 -0.0676 0.0854 0.787 Pro_T L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 1.08e-01 0.143 0.0888 0.787 Pro_T L2
ENSG00000112378 PERP -110560 sc-eQTL 2.22e-01 0.101 0.0823 0.787 Pro_T L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 6.13e-02 0.0972 0.0517 0.787 Pro_T L2
ENSG00000135597 REPS1 -991402 sc-eQTL 1.23e-01 0.16 0.103 0.787 Pro_T L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 9.42e-01 -0.00734 0.101 0.787 Pro_T L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 8.05e-01 -0.0257 0.104 0.788 Treg L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 8.45e-01 -0.0192 0.0981 0.788 Treg L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 4.17e-01 0.0578 0.0711 0.788 Treg L2
ENSG00000112378 PERP -110560 sc-eQTL 4.96e-01 -0.0764 0.112 0.788 Treg L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 7.26e-02 0.112 0.0619 0.788 Treg L2
ENSG00000135597 REPS1 -991402 sc-eQTL 4.23e-01 -0.0718 0.0894 0.788 Treg L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 4.08e-01 -0.0787 0.0949 0.788 Treg L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 6.10e-01 -0.0543 0.106 0.8 cDC L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 7.60e-01 -0.0265 0.0865 0.8 cDC L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 4.60e-01 0.0564 0.0761 0.8 cDC L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 6.00e-01 0.0448 0.0853 0.8 cDC L2
ENSG00000135540 NHSL1 -695712 sc-eQTL 2.64e-01 -0.11 0.0985 0.8 cDC L2
ENSG00000135597 REPS1 -991402 sc-eQTL 7.09e-01 -0.0426 0.114 0.8 cDC L2
ENSG00000225177 AL590617.2 -695689 sc-eQTL 8.75e-01 0.0172 0.109 0.8 cDC L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 6.91e-02 0.201 0.11 0.8 cDC L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 5.17e-01 0.0531 0.0818 0.788 cMono_IL1B L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 7.60e-01 -0.0183 0.0597 0.788 cMono_IL1B L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 1.40e-01 0.0867 0.0585 0.788 cMono_IL1B L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 8.43e-01 -0.0127 0.0643 0.788 cMono_IL1B L2
ENSG00000135540 NHSL1 -695712 sc-eQTL 3.09e-01 0.1 0.0983 0.788 cMono_IL1B L2
ENSG00000135597 REPS1 -991402 sc-eQTL 2.04e-01 0.112 0.0877 0.788 cMono_IL1B L2
ENSG00000225177 AL590617.2 -695689 sc-eQTL 8.29e-02 0.179 0.102 0.788 cMono_IL1B L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 8.87e-01 -0.00975 0.0686 0.788 cMono_IL1B L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 7.07e-01 -0.0352 0.0934 0.788 cMono_S100A L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 6.88e-01 0.0276 0.0686 0.788 cMono_S100A L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 1.01e-02 0.163 0.0629 0.788 cMono_S100A L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 1.49e-01 -0.0879 0.0607 0.788 cMono_S100A L2
ENSG00000135540 NHSL1 -695712 sc-eQTL 1.92e-01 0.131 0.0997 0.788 cMono_S100A L2
ENSG00000135597 REPS1 -991402 sc-eQTL 2.49e-01 -0.109 0.0944 0.788 cMono_S100A L2
ENSG00000225177 AL590617.2 -695689 sc-eQTL 8.09e-02 0.191 0.109 0.788 cMono_S100A L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 2.80e-01 0.0947 0.0873 0.788 cMono_S100A L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 8.79e-01 -0.0201 0.132 0.785 gdT L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 1.93e-01 -0.138 0.105 0.785 gdT L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 1.56e-02 0.303 0.124 0.785 gdT L2
ENSG00000112378 PERP -110560 sc-eQTL 4.48e-01 -0.089 0.117 0.785 gdT L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 4.32e-01 0.0512 0.065 0.785 gdT L2
ENSG00000135597 REPS1 -991402 sc-eQTL 1.70e-01 0.178 0.129 0.785 gdT L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 2.85e-01 -0.126 0.118 0.785 gdT L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 7.80e-01 -0.0307 0.11 0.787 intMono L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 3.29e-01 0.0722 0.0738 0.787 intMono L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 1.43e-02 0.18 0.0727 0.787 intMono L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 6.31e-01 -0.0307 0.0639 0.787 intMono L2
ENSG00000135540 NHSL1 -695712 sc-eQTL 7.19e-01 0.0359 0.0994 0.787 intMono L2
ENSG00000135597 REPS1 -991402 sc-eQTL 1.23e-02 0.256 0.101 0.787 intMono L2
ENSG00000225177 AL590617.2 -695689 sc-eQTL 6.24e-01 0.0548 0.112 0.787 intMono L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 8.89e-01 -0.0133 0.0952 0.787 intMono L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 9.15e-01 0.011 0.103 0.787 ncMono L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 7.66e-01 -0.0262 0.0879 0.787 ncMono L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 2.57e-01 0.0698 0.0614 0.787 ncMono L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 8.45e-01 -0.0152 0.0778 0.787 ncMono L2
ENSG00000135540 NHSL1 -695712 sc-eQTL 8.62e-01 0.0173 0.0992 0.787 ncMono L2
ENSG00000135597 REPS1 -991402 sc-eQTL 4.78e-01 -0.0531 0.0747 0.787 ncMono L2
ENSG00000225177 AL590617.2 -695689 sc-eQTL 8.83e-01 -0.0163 0.11 0.787 ncMono L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 5.78e-01 0.0542 0.0972 0.787 ncMono L2
ENSG00000024862 CCDC28A -776650 sc-eQTL 3.02e-01 -0.124 0.12 0.799 pDC L2
ENSG00000027697 IFNGR1 777410 sc-eQTL 8.47e-01 -0.0197 0.102 0.799 pDC L2
ENSG00000051620 HEBP2 -406672 sc-eQTL 2.28e-01 0.113 0.0932 0.799 pDC L2
ENSG00000118503 TNFAIP3 129645 sc-eQTL 1.64e-01 0.132 0.0941 0.799 pDC L2
ENSG00000135540 NHSL1 -695712 sc-eQTL 1.50e-02 -0.225 0.0914 0.799 pDC L2
ENSG00000135597 REPS1 -991402 sc-eQTL 1.52e-01 0.135 0.0938 0.799 pDC L2
ENSG00000225177 AL590617.2 -695689 sc-eQTL 5.80e-02 -0.177 0.0925 0.799 pDC L2
ENSG00000237499 WAKMAR2 128626 sc-eQTL 9.24e-01 0.00913 0.0961 0.799 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000024862 CCDC28A -776650 sc-eQTL 9.41e-01 0.00738 0.1 0.788 B_Memory LOneK1K
ENSG00000027697 IFNGR1 777410 sc-eQTL 8.72e-01 -0.0138 0.0855 0.788 B_Memory LOneK1K
ENSG00000051620 HEBP2 -406672 sc-eQTL 4.71e-02 0.137 0.0687 0.788 B_Memory LOneK1K
ENSG00000112378 PERP -110560 sc-eQTL 8.59e-01 -0.0162 0.0914 0.788 B_Memory LOneK1K
ENSG00000118503 TNFAIP3 129645 sc-eQTL 3.73e-01 0.0538 0.0602 0.788 B_Memory LOneK1K
ENSG00000135597 REPS1 -991402 sc-eQTL 5.38e-01 0.0569 0.0923 0.788 B_Memory LOneK1K
ENSG00000237499 WAKMAR2 128626 sc-eQTL 2.95e-01 -0.107 0.102 0.788 B_Memory LOneK1K
ENSG00000024862 CCDC28A -776650 sc-eQTL 2.34e-01 -0.112 0.0935 0.788 B_Naive LOneK1K
ENSG00000027697 IFNGR1 777410 sc-eQTL 7.40e-01 -0.0292 0.0877 0.788 B_Naive LOneK1K
ENSG00000051620 HEBP2 -406672 sc-eQTL 1.29e-01 0.0986 0.0647 0.788 B_Naive LOneK1K
ENSG00000112378 PERP -110560 sc-eQTL 6.22e-01 0.0471 0.0955 0.788 B_Naive LOneK1K
ENSG00000118503 TNFAIP3 129645 sc-eQTL 3.78e-01 0.0443 0.0501 0.788 B_Naive LOneK1K
ENSG00000135597 REPS1 -991402 sc-eQTL 6.55e-01 0.0334 0.0748 0.788 B_Naive LOneK1K
ENSG00000237499 WAKMAR2 128626 sc-eQTL 6.29e-01 0.0432 0.0894 0.788 B_Naive LOneK1K
ENSG00000024862 CCDC28A -776650 sc-eQTL 5.28e-01 0.0479 0.0758 0.788 CD14_Mono LOneK1K
ENSG00000027697 IFNGR1 777410 sc-eQTL 8.45e-01 -0.0118 0.0604 0.788 CD14_Mono LOneK1K
ENSG00000051620 HEBP2 -406672 sc-eQTL 2.50e-02 0.126 0.0559 0.788 CD14_Mono LOneK1K
ENSG00000118503 TNFAIP3 129645 sc-eQTL 6.35e-01 -0.0265 0.0558 0.788 CD14_Mono LOneK1K
ENSG00000135540 NHSL1 -695712 sc-eQTL 2.36e-01 0.118 0.0991 0.788 CD14_Mono LOneK1K
ENSG00000135597 REPS1 -991402 sc-eQTL 3.63e-01 0.0745 0.0817 0.788 CD14_Mono LOneK1K
ENSG00000225177 AL590617.2 -695689 sc-eQTL 6.21e-02 0.199 0.106 0.788 CD14_Mono LOneK1K
ENSG00000237499 WAKMAR2 128626 sc-eQTL 6.23e-01 0.033 0.0669 0.788 CD14_Mono LOneK1K
ENSG00000024862 CCDC28A -776650 sc-eQTL 4.15e-01 0.0823 0.101 0.787 CD16_Mono LOneK1K
ENSG00000027697 IFNGR1 777410 sc-eQTL 7.75e-01 0.0202 0.0705 0.787 CD16_Mono LOneK1K
ENSG00000051620 HEBP2 -406672 sc-eQTL 4.09e-02 0.11 0.0533 0.787 CD16_Mono LOneK1K
ENSG00000118503 TNFAIP3 129645 sc-eQTL 8.29e-01 -0.0143 0.0659 0.787 CD16_Mono LOneK1K
ENSG00000135540 NHSL1 -695712 sc-eQTL 8.04e-01 0.0238 0.0957 0.787 CD16_Mono LOneK1K
ENSG00000135597 REPS1 -991402 sc-eQTL 5.55e-01 0.0352 0.0595 0.787 CD16_Mono LOneK1K
ENSG00000225177 AL590617.2 -695689 sc-eQTL 7.34e-01 0.036 0.106 0.787 CD16_Mono LOneK1K
ENSG00000237499 WAKMAR2 128626 sc-eQTL 9.59e-01 -0.0046 0.0883 0.787 CD16_Mono LOneK1K
ENSG00000024862 CCDC28A -776650 sc-eQTL 1.40e-01 0.141 0.0953 0.791 NK_CD56dim LOneK1K
ENSG00000027697 IFNGR1 777410 sc-eQTL 4.93e-01 -0.046 0.0669 0.791 NK_CD56dim LOneK1K
ENSG00000051620 HEBP2 -406672 sc-eQTL 5.92e-01 0.0445 0.083 0.791 NK_CD56dim LOneK1K
ENSG00000112378 PERP -110560 sc-eQTL 5.23e-01 0.0447 0.07 0.791 NK_CD56dim LOneK1K
ENSG00000118503 TNFAIP3 129645 sc-eQTL 3.53e-01 0.0567 0.0609 0.791 NK_CD56dim LOneK1K
ENSG00000135597 REPS1 -991402 sc-eQTL 4.63e-01 -0.0585 0.0797 0.791 NK_CD56dim LOneK1K
ENSG00000237499 WAKMAR2 128626 sc-eQTL 8.90e-01 0.0119 0.0854 0.791 NK_CD56dim LOneK1K


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000051620 HEBP2 -406672 eQTL 0.0306 0.0527 0.0243 0.0 0.0 0.214


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000051620 HEBP2 -406672 1.01e-06 6.07e-07 1e-07 4.27e-07 9.45e-08 2.54e-07 5.82e-07 1.4e-07 4.74e-07 2.57e-07 8.15e-07 3.62e-07 9.37e-07 1.49e-07 2.26e-07 2.69e-07 3.35e-07 4.11e-07 2.17e-07 1.63e-07 2.05e-07 4.14e-07 3.87e-07 1.91e-07 9.71e-07 2.6e-07 2.94e-07 2.7e-07 4.06e-07 6.47e-07 3.43e-07 8.32e-08 5.6e-08 1.54e-07 3.48e-07 7.57e-08 8.52e-08 8.33e-08 6.41e-08 2.53e-08 9.7e-08 6.8e-07 2.47e-08 1.53e-08 1.23e-07 1.29e-08 1.03e-07 3.3e-09 5.71e-08